Contig-U12025-1
Contig ID Contig-U12025-1
Contig update 2002.12.18
Contig sequence
>Contig-U12025-1 (Contig-U12025-1Q) /CSM_Contig/Contig-U12025-1Q.Seq.d
ATGAATTGAAGGAGATACCAACTCATTATTTACCAACTGATGTTAGAATT
AGATCAGAGATTGAGAGTAAACAATTGAAACTATTGGAATTACAAAGAAA
ACTTCGTAATGATGTATCGTTAGAGATGGAGGATCAAGTATTGATACGTT
CAATTCAAAACAATAGCAAGGGATATGATGACAATGATTACAATCTCTAC
GTACGTTCAATTCCACGTTTAATCAATAGACCTATCGATCAAACTAGTTC
AATCTACGATACTACTACAACTCAATTACCAGAGAGTATATTGGTGACAA
ATAAAAAGAAATTCTTGGAAGCAATTGCAATTCATGCAAGAGATTTCAAA
GTGTTTCATAGTAACAATGAGAAATTTCTTCGTCAAAATGTTATCAAAGC
AATACATCGTTATCATAAAGAGAAAGAAAAGAGAGAGATTGAACGTTTAT
CAAAGGAACGTATTCGTTTACTTAAAGCACGTGATACCCGAAGGTTATAG
AGATCTTTTAGCAAAAACAAAGAATGAACGTTTAGAAATGCTTTTAGGTG
AAACTGATTCCCTCTTAAGTAGTATTCATCAATTAATGGAAAAAGAACAA
ACTGAAAAAAGAGCACGTGAATTAGAAGAAGAATTNNNNNNNNN------
----NNNNNNNNNNTGATTCACCATTTTGGATTTTCGTACTCTCAACTCA
TGCCGGTGGTTTAGGTATGAATTTACAAACTGCCGATACTGTAATCATTT
TCGATTCCGATTGGAATCCACAAATGGATCTTCAAGCTCATGATAGATGT
CATCGTATTGGTCAAACTAATTCTGTGTCGGTGTTTCGTTTAATCTCTGC
CAACTCTATCGAAGAGAAAATTCTAGGTAGAGCCACCGATAAATTGGAGA
TCGATGCAAAGATTATTCAAGCCGGTATGTTTAACACTCATTCCAACGAT
CAAGAAAGACGTGCAAAATTGGAACAATTCCTTCATGGTTTCCCCAATAA
TACTTTGGATGAAGTACCAGTGGATCTAAAGGAAATCAATAAATTGATTG
CTCGTGATGACTTTGAATTCAAACAATTCCAAGAGATGGATAAAGAACGT
TTGAAAGTGGATCAAGCAAATTCAAAGAAAACTAGACAACCAATTAAACC
ACGTCTAATGATCGAAAAAGAATTACCTGAATGGGTTTTGGCAACTCCTG
TCACCGATAAGGATGAAGATATCGCTGGTAAGAAACGTTCAACCGCCATT
GCTTCTGCCAATAGTTTTGTTCATGATAATTTAACCGATAATCAATATGC
TAGAATGATGAAAAGAATATGACCTTTGAACAGTATAAAGCTCATTTAGA
GGCAAAGAAATTAAAG

Gap gap included
Contig length 1356
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 2929381
End point 2930649
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 2
Link to clone list U12025
List of clone(s)

est1=SHA184F,1,635
est2=SHA184Z,636,1338
Translated Amino Acid sequence
mn*rryqliiyqlmleldqrlrvnn*nywnykenfvmmyr*rwriky*yvqfktiardmm
tmitistyvqfhv*sidlsiklvqstillqlnyqrvyw*QIKRNSWKQLQFMQEISKCFI
VTMRNFFVKMLSKQYIVIIKRKKRERLNVYQRNVFVYLKHVIPEGYRDLLAKTKNERLEM
LLGETDSLLSSIHQLMEKEQTEKRARELEEEXXX---

---XXXDSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAHDRCHRIGQTNSV
SVFRLISANSIEEKILGRATDKLEIDAKIIQAGMFNTHSNDQERRAKLEQFLHGFPNNTL
DEVPVDLKEINKLIARDDFEFKQFQEMDKERLKVDQANSKKTRQPIKPRLMIEKELPEWV
LATPVTDKDEDIAGKKRSTAIASANSFVHDNLTDNQYARMMKRI*plnsikli*rqrn*


Translated Amino Acid sequence (All Frames)
Frame A:
mn*rryqliiyqlmleldqrlrvnn*nywnykenfvmmyr*rwriky*yvqfktiardmm
tmitistyvqfhv*sidlsiklvqstillqlnyqrvyw*QIKRNSWKQLQFMQEISKCFI
VTMRNFFVKMLSKQYIVIIKRKKRERLNVYQRNVFVYLKHVIPEGYRDLLAKTKNERLEM
LLGETDSLLSSIHQLMEKEQTEKRARELEEEXXX---

---xxxxihhfgfsysqlmpvv*v*iyklpil*sfsipigihkwifklmidvivlvklil
crcfv*slptlskrkf*veppinwrsmqrlfkpvcltliptikkdvqnwnnsfmvspiil
wmkyqwi*rksin*llvmtlnsnnskrwiknv*kwikqiqrkldnqlnhv**skknylng
fwqllspirmkislvrnvqpplllpivlfmii*piinmle**keydl*tv*ssfrgkeik

Frame B:
*iegdtnslftn*c*n*ird*e*tietigitkkts**civrdggssidtfnskq*qgi**
q*lqslrtfnstfnq*tyrsn*fnlryyynsitreyigdk*keilgsncnsckrfqsvs*
*q*eissskcyqsntsls*rerkerd*tfikgtysft*st*ypkvieif*qkqrmnv*kc
f*vklips*vvfin*wkknklkkehvn*kknxxx---

---xxx*ftildfrtlnscrwfryeftncrycnhfrfrlestngssss**mssywsn*fc
vgvsfnlcqlyrrensr*shr*igdrckdyssryv*hsfqrsrktckigtipswfpq*yf
g*stsgskgnq*idcs**l*iqtiprdg*rtfesgsskfken*ttn*ttsndrkrit*mg
fgnschr*g*ryrw*etfnrhcfcq*fcs**fnr*sic*ndeknmtfeqykahleakklk

Frame C:
elkeipthylptdvrirseieskqlkllelqrklrndvslemedqvlirsiqnnskgydd
ndynlyvrsiprlinrpidqtssiydttttqlpesilvtnkkkfleaiaihardfkvfhs
nnekflrqnvikaihryhkekekreierlskerirllkardtrrl*rsfsknke*tfrna
fr*n*fplk*yssingkrtn*kkst*irrrixxx---

---XXXDSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAHDRCHRIGQTNSV
SVFRLISANSIEEKILGRATDKLEIDAKIIQAGMFNTHSNDQERRAKLEQFLHGFPNNTL
DEVPVDLKEINKLIARDDFEFKQFQEMDKERLKVDQANSKKTRQPIKPRLMIEKELPEWV
LATPVTDKDEDIAGKKRSTAIASANSFVHDNLTDNQYARMMKRI*plnsikli*rqrn*

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U12025-1 (Contig-U12025-1Q)
/CSM_Contig/Contig-U12025-1Q.Seq.d
(1366 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U12025-1 (Contig-U12025-1Q) /CSM_Contig/Conti... 1392 0.0
Contig-U10818-1 (Contig-U10818-1Q) /CSM_Contig/Conti... 72 2e-12
Contig-U13069-1 (Contig-U13069-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U07284-1 (Contig-U07284-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U12729-1 (Contig-U12729-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U11841-1 (Contig-U11841-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U11039-1 (Contig-U11039-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U04795-1 (Contig-U04795-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U13914-1 (Contig-U13914-1Q) /CSM_Contig/Conti... 36 0.097
Contig-U12133-1 (Contig-U12133-1Q) /CSM_Contig/Conti... 36 0.097

>Contig-U12025-1 (Contig-U12025-1Q) /CSM_Contig/Contig-U12025-1Q.Seq.d
Length = 1366

Score = 1392 bits (702), Expect = 0.0
Identities = 702/702 (100%)
Strand = Plus / Plus


Query: 665 tgattcaccattttggattttcgtactctcaactcatgccggtggtttaggtatgaattt 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tgattcaccattttggattttcgtactctcaactcatgccggtggtttaggtatgaattt 724


Query: 725 acaaactgccgatactgtaatcattttcgattccgattggaatccacaaatggatcttca 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 acaaactgccgatactgtaatcattttcgattccgattggaatccacaaatggatcttca 784


Query: 785 agctcatgatagatgtcatcgtattggtcaaactaattctgtgtcggtgtttcgtttaat 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 agctcatgatagatgtcatcgtattggtcaaactaattctgtgtcggtgtttcgtttaat 844


Query: 845 ctctgccaactctatcgaagagaaaattctaggtagagccaccgataaattggagatcga 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 ctctgccaactctatcgaagagaaaattctaggtagagccaccgataaattggagatcga 904


Query: 905 tgcaaagattattcaagccggtatgtttaacactcattccaacgatcaagaaagacgtgc 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tgcaaagattattcaagccggtatgtttaacactcattccaacgatcaagaaagacgtgc 964


Query: 965 aaaattggaacaattccttcatggtttccccaataatactttggatgaagtaccagtgga 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 aaaattggaacaattccttcatggtttccccaataatactttggatgaagtaccagtgga 1024


Query: 1025 tctaaaggaaatcaataaattgattgctcgtgatgactttgaattcaaacaattccaaga 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 tctaaaggaaatcaataaattgattgctcgtgatgactttgaattcaaacaattccaaga 1084


Query: 1085 gatggataaagaacgtttgaaagtggatcaagcaaattcaaagaaaactagacaaccaat 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 gatggataaagaacgtttgaaagtggatcaagcaaattcaaagaaaactagacaaccaat 1144


Query: 1145 taaaccacgtctaatgatcgaaaaagaattacctgaatgggttttggcaactcctgtcac 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 taaaccacgtctaatgatcgaaaaagaattacctgaatgggttttggcaactcctgtcac 1204


Query: 1205 cgataaggatgaagatatcgctggtaagaaacgttcaaccgccattgcttctgccaatag 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 cgataaggatgaagatatcgctggtaagaaacgttcaaccgccattgcttctgccaatag 1264


Query: 1265 ttttgttcatgataatttaaccgataatcaatatgctagaatgatgaaaagaatatgacc 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 ttttgttcatgataatttaaccgataatcaatatgctagaatgatgaaaagaatatgacc 1324


Query: 1325 tttgaacagtataaagctcatttagaggcaaagaaattaaag 1366
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 tttgaacagtataaagctcatttagaggcaaagaaattaaag 1366


Score = 1259 bits (635), Expect = 0.0
Identities = 635/635 (100%)
Strand = Plus / Plus


Query: 1 atgaattgaaggagataccaactcattatttaccaactgatgttagaattagatcagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaattgaaggagataccaactcattatttaccaactgatgttagaattagatcagaga 60


Query: 61 ttgagagtaaacaattgaaactattggaattacaaagaaaacttcgtaatgatgtatcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgagagtaaacaattgaaactattggaattacaaagaaaacttcgtaatgatgtatcgt 120


Query: 121 tagagatggaggatcaagtattgatacgttcaattcaaaacaatagcaagggatatgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagagatggaggatcaagtattgatacgttcaattcaaaacaatagcaagggatatgatg 180


Query: 181 acaatgattacaatctctacgtacgttcaattccacgtttaatcaatagacctatcgatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaatgattacaatctctacgtacgttcaattccacgtttaatcaatagacctatcgatc 240


Query: 241 aaactagttcaatctacgatactactacaactcaattaccagagagtatattggtgacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaactagttcaatctacgatactactacaactcaattaccagagagtatattggtgacaa 300


Query: 301 ataaaaagaaattcttggaagcaattgcaattcatgcaagagatttcaaagtgtttcata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ataaaaagaaattcttggaagcaattgcaattcatgcaagagatttcaaagtgtttcata 360


Query: 361 gtaacaatgagaaatttcttcgtcaaaatgttatcaaagcaatacatcgttatcataaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaacaatgagaaatttcttcgtcaaaatgttatcaaagcaatacatcgttatcataaag 420


Query: 421 agaaagaaaagagagagattgaacgtttatcaaaggaacgtattcgtttacttaaagcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agaaagaaaagagagagattgaacgtttatcaaaggaacgtattcgtttacttaaagcac 480


Query: 481 gtgatacccgaaggttatagagatcttttagcaaaaacaaagaatgaacgtttagaaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgatacccgaaggttatagagatcttttagcaaaaacaaagaatgaacgtttagaaatg 540


Query: 541 cttttaggtgaaactgattccctcttaagtagtattcatcaattaatggaaaaagaacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cttttaggtgaaactgattccctcttaagtagtattcatcaattaatggaaaaagaacaa 600


Query: 601 actgaaaaaagagcacgtgaattagaagaagaatt 635
|||||||||||||||||||||||||||||||||||
Sbjct: 601 actgaaaaaagagcacgtgaattagaagaagaatt 635


>Contig-U10818-1 (Contig-U10818-1Q) /CSM_Contig/Contig-U10818-1Q.Seq.d
Length = 3604

Score = 71.9 bits (36), Expect = 2e-12
Identities = 96/116 (82%)
Strand = Plus / Plus


Query: 702 gccggtggtttaggtatgaatttacaaactgccgatactgtaatcattttcgattccgat 761
||||||||| | ||||| |||||| ||| |||||||| || || |||||||| |||
Sbjct: 1846 gccggtggtcttggtatcaatttaacaacagccgataccgttattcttttcgatagtgat 1905


Query: 762 tggaatccacaaatggatcttcaagctcatgatagatgtcatcgtattggtcaaac 817
|||||||||||| ||| | |||||||| | ||||||||||||||||||||||||
Sbjct: 1906 tggaatccacaatcagatttacaagctcaagctagatgtcatcgtattggtcaaac 1961


>Contig-U13069-1 (Contig-U13069-1Q) /CSM_Contig/Contig-U13069-1Q.Seq.d
Length = 754

Score = 42.1 bits (21), Expect = 0.002
Identities = 24/25 (96%)
Strand = Plus / Plus


Query: 72 caattgaaactattggaattacaaa 96
||||||||||| |||||||||||||
Sbjct: 343 caattgaaacttttggaattacaaa 367


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,869
Number of Sequences: 6905
Number of extensions: 12869
Number of successful extensions: 1425
Number of sequences better than 10.0: 151
length of query: 1366
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1350
effective length of database: 5,564,391
effective search space: 7511927850
effective search space used: 7511927850
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.28
Homology vs DNA
Query= Contig-U12025-1 (Contig-U12025-1Q) /CSM_Contig/Contig-U12025-1Q.Seq.d
(1366 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ403338) Dictyostelium discoideum cDNA clone:dds24g21, 3' ... 1392 0.0 1
(BJ391687) Dictyostelium discoideum cDNA clone:dds24g21, 5' ... 1259 0.0 1
(EB750485) 989441 JF06 Tribolium castaneum cDNA clone 499502... 86 4e-12 1
(DN649600) G6733.86 Exelixis Tribolium castaneum cDNA Librar... 86 4e-12 1
(CR382139) Debaryomyces hansenii chromosome G of strain CBS7... 60 5e-12 2
(DJ130186) Method for identification of useful proteins deri... 52 9e-12 3
(FD452033) EGGAF07TR Haematobia irritans eggs Haematobia irr... 74 2e-11 2
(AL400663) T3 end of clone AS0AA023A04 of library AS0AA from... 46 5e-10 3
(AR550010) Sequence 5141 from patent US 6747137. 58 7e-10 4
(DR753988) Tcex116 Tribolium castaneum Cloned RACE products ... 78 1e-09 1
(DQ129687) Candida albicans Swi/Snf core member protein (SNF... 60 1e-09 2
(AU061828) Dictyostelium discoideum slug cDNA, clone SLG252. 72 2e-08 2
(BJ336055) Dictyostelium discoideum cDNA clone:dda52h13, 5' ... 66 2e-08 3
(AE013599) Drosophila melanogaster chromosome 2R, complete s... 42 6e-08 3
(BJ365648) Dictyostelium discoideum cDNA clone:ddc36h05, 5' ... 50 7e-08 2
(BJ365643) Dictyostelium discoideum cDNA clone:ddc36g05, 5' ... 50 7e-08 2
(AC016021) Drosophila melanogaster, chromosome 2R, region 49... 42 8e-08 3
(AC016793) Drosophila melanogaster strain y chromosome 2 clo... 42 8e-08 3
(AC014974) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 42 8e-08 3
(CQ590894) Sequence 18652 from Patent WO0171042. 42 9e-08 3
(CQ590895) Sequence 18653 from Patent WO0171042. 42 9e-08 3
(BD301505) Identification and Use of Molecules Implicated in... 42 9e-08 3
(AX683150) Sequence 124 from Patent EP1279744. 42 9e-08 3
(L27127) Drosophila melanogaster imitation-SWI protein (ISWI... 42 9e-08 3
(AY094908) Drosophila melanogaster RH13158 full insert cDNA. 42 9e-08 3
(BI630628) RH59908.5prime RH Drosophila melanogaster normali... 42 1e-07 3
(BI623303) RH55428.5prime RH Drosophila melanogaster normali... 42 1e-07 3
(BI621218) RH52527.5prime RH Drosophila melanogaster normali... 42 1e-07 3
(CO333097) EK305658.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 42 1e-07 3
(EC079343) 515810 CK01 Drosophila melanogaster cDNA clone 28... 42 1e-07 3
(EC051113) 2646438 AB01 Drosophila melanogaster cDNA clone 1... 42 1e-07 3
(EC053148) 2647606 AB01 Drosophila melanogaster cDNA clone 1... 42 1e-07 3
(EC056403) 4770061 AB03 Drosophila melanogaster cDNA clone 1... 42 1e-07 3
(Z46833) S.cerevisiae chromosome IX cosmid 8277. 70 2e-07 1
(M83755) Saccharomyces cerevisiae STH1 gene, complete cds. 70 2e-07 1
(D10595) Saccharomyces cerevisiae NPS1 gene for nuclear prot... 70 2e-07 1
(DQ115392) Saccharomyces cerevisiae Vhs2p (VHS2) gene, parti... 70 2e-07 1
(EA396953) Sequence 45777 from patent US 7314974. 70 2e-07 1
(DJ206457) Method for identification of useful proteins deri... 70 2e-07 1
(DJ025877) Genome-wide DNA marker of Saccharomyces cerevisiae. 70 2e-07 1
(AC138525) Homo sapiens chromosome 5 clone XXyac-4X16C5, WOR... 70 2e-07 1
(EB531312) AGENCOURT_52962912 D. erecta EST Drosophila erect... 56 1e-06 2
(CP000502) Pichia stipitis CBS 6054 chromosome 8, complete s... 66 4e-06 1
(CZ533437) SRAA-aac85b06.g1 Strongyloides ratti whole genome... 66 4e-06 1
(DT610965) ACAG-aab09g09.g1 Hydra_EST_UCI-9 Hydra magnipapil... 66 4e-06 1
(DR437142) ACAB-aaa59e04.g1 Hydra UCI6- barcoded EST's Hydra... 66 4e-06 1
(BJ370561) Dictyostelium discoideum cDNA clone:ddc54g15, 5' ... 66 4e-06 1
(BJ368934) Dictyostelium discoideum cDNA clone:ddc48k13, 5' ... 66 4e-06 1
(CU329670) Schizosaccharomyces pombe chromosome I. 54 1e-05 2
(CR380958) Candida glabrata strain CBS138 chromosome L compl... 48 1e-05 2
(AB162438) Schizosaccharomyces pombe snf21 gene for SNF2-fam... 54 1e-05 2
(EA377153) Sequence 25976 from patent US 7314974. 54 1e-05 2
(DR996984) Mdfb8002J14.g1 Apple_EST_Mdfb Malus x domestica c... 42 2e-05 2
(AL407931) T7 end of clone AV0AA005E09 of library AV0AA from... 58 3e-05 2
(CR382138) Debaryomyces hansenii chromosome F of strain CBS7... 48 4e-05 2
(CZ279811) cp07g12.r Candida parapsilosis Random Genomic Lib... 62 6e-05 1
(AW333477) S22C8 AGS-1 Pneumocystis carinii cDNA 3', mRNA se... 44 6e-05 2
(CQ604505) Sequence 32263 from Patent WO0171042. 60 2e-04 1
(CQ579255) Sequence 7013 from Patent WO0171042. 60 2e-04 1
(CQ579254) Sequence 7012 from Patent WO0171042. 60 2e-04 1
(AF215703) Drosophila melanogaster KISMET-L long isoform (ki... 60 2e-04 1
(AE014134) Drosophila melanogaster chromosome 2L, complete s... 60 2e-04 1
(AC008371) Drosophila melanogaster, chromosome 2L, region 21... 60 2e-04 1
(AC004274) Drosophila melanogaster DNA sequence (P1 DS07049 ... 60 2e-04 1
(AC017134) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 60 2e-04 1
(BB329501) Mus musculus 4 days neonate thymus cDNA, RIKEN fu... 60 2e-04 1
(FC645704) CAXU7931.fwd CAXU Lottia gigantea from female gon... 42 8e-04 2
(FF579515) Fernando_27_F04 Drosophila gastrula substracted c... 42 9e-04 2
(CR382122) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 58 0.001 1
(AL429824) clone BA0AB033H11 of library BA0AB from strain CL... 58 0.001 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 44 0.002 2
(AC093499) Drosophila melanogaster 3L BAC RP98-18K24 (Roswel... 44 0.003 2
(AC014424) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 0.003 2
(CQ584870) Sequence 12628 from Patent WO0171042. 44 0.003 2
(CQ599999) Sequence 27757 from Patent WO0171042. 44 0.003 2
(CQ584871) Sequence 12629 from Patent WO0171042. 44 0.003 2
(AY095048) Drosophila melanogaster LD36356 full insert cDNA. 44 0.003 2
(BT009972) Drosophila melanogaster RE61274 full insert cDNA. 44 0.003 2
(M85049) Drosophila melanogaster brahma protein mRNA, comple... 44 0.003 2
(CQ600000) Sequence 27758 from Patent WO0171042. 44 0.003 2
(EE572126) G01_G01sg3l1_pDNRf_531902 Myzus persicae, tobacco... 42 0.003 2
(DR395666) USDA-FP_155601 Adult Alate Aphis gossypii (WHAGA)... 42 0.003 2
(EX849612) CBNC8020.fwd CBNC Phycomyces blakesleeanus NRRL15... 40 0.003 2
(EA387664) Sequence 36488 from patent US 7314974. 56 0.004 1
(FC548268) AIAI-aad74d07.b1 Anclostoma_caninum_EST_L3_Activa... 56 0.004 1
(EX557593) AIAE-aab00b10.b1 Ancylostoma_caninum_EST_Female_p... 56 0.004 1
(EX555742) AIAE-aaa16b02.g1 Ancylostoma_caninum_EST_Female_p... 56 0.004 1
(FC675339) CAXX10626.rev CAXX Lottia gigantea from male gona... 42 0.012 2
(FC687262) CAXX1936.fwd CAXX Lottia gigantea from male gonad... 42 0.012 2
(FC784893) CBGC15450.fwd CBGC Lottia gigantea 15h 18h embryo... 42 0.012 2
(AZ923661) 4908.gf21m10.s1 Saccharomyces cariocanus UFRJ 507... 36 0.012 2
(FC698821) CAXX7277.fwd CAXX Lottia gigantea from male gonad... 42 0.012 2
(AZ923537) 4908.gf21f15.s1 Saccharomyces cariocanus UFRJ 507... 36 0.013 2
(EG960184) AU_Ich_011D_G11 Whole organism normalized cDNA li... 54 0.014 1
(EV275774) GLMCL75TF JCVI-SOY2 Glycine max cDNA 5', mRNA seq... 54 0.014 1
(CN627428) tae92b10.y1 Hydra EST Darmstadt I Hydra magnipapi... 42 0.015 3
(EA378472) Sequence 27295 from patent US 7314974. 52 0.025 2
(CR382123) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 38 0.032 2
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4... 36 0.035 2
(AC084459) Caenorhabditis briggsae cosmid CB032J19, complete... 42 0.037 2

>(BJ403338) Dictyostelium discoideum cDNA clone:dds24g21, 3' end,
single read.
Length = 703

Score = 1392 bits (702), Expect = 0.0
Identities = 702/702 (100%)
Strand = Plus / Minus


Query: 665 tgattcaccattttggattttcgtactctcaactcatgccggtggtttaggtatgaattt 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tgattcaccattttggattttcgtactctcaactcatgccggtggtttaggtatgaattt 644


Query: 725 acaaactgccgatactgtaatcattttcgattccgattggaatccacaaatggatcttca 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 acaaactgccgatactgtaatcattttcgattccgattggaatccacaaatggatcttca 584


Query: 785 agctcatgatagatgtcatcgtattggtcaaactaattctgtgtcggtgtttcgtttaat 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agctcatgatagatgtcatcgtattggtcaaactaattctgtgtcggtgtttcgtttaat 524


Query: 845 ctctgccaactctatcgaagagaaaattctaggtagagccaccgataaattggagatcga 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ctctgccaactctatcgaagagaaaattctaggtagagccaccgataaattggagatcga 464


Query: 905 tgcaaagattattcaagccggtatgtttaacactcattccaacgatcaagaaagacgtgc 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tgcaaagattattcaagccggtatgtttaacactcattccaacgatcaagaaagacgtgc 404


Query: 965 aaaattggaacaattccttcatggtttccccaataatactttggatgaagtaccagtgga 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aaaattggaacaattccttcatggtttccccaataatactttggatgaagtaccagtgga 344


Query: 1025 tctaaaggaaatcaataaattgattgctcgtgatgactttgaattcaaacaattccaaga 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tctaaaggaaatcaataaattgattgctcgtgatgactttgaattcaaacaattccaaga 284


Query: 1085 gatggataaagaacgtttgaaagtggatcaagcaaattcaaagaaaactagacaaccaat 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gatggataaagaacgtttgaaagtggatcaagcaaattcaaagaaaactagacaaccaat 224


Query: 1145 taaaccacgtctaatgatcgaaaaagaattacctgaatgggttttggcaactcctgtcac 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 taaaccacgtctaatgatcgaaaaagaattacctgaatgggttttggcaactcctgtcac 164


Query: 1205 cgataaggatgaagatatcgctggtaagaaacgttcaaccgccattgcttctgccaatag 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 cgataaggatgaagatatcgctggtaagaaacgttcaaccgccattgcttctgccaatag 104


Query: 1265 ttttgttcatgataatttaaccgataatcaatatgctagaatgatgaaaagaatatgacc 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ttttgttcatgataatttaaccgataatcaatatgctagaatgatgaaaagaatatgacc 44


Query: 1325 tttgaacagtataaagctcatttagaggcaaagaaattaaag 1366
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 tttgaacagtataaagctcatttagaggcaaagaaattaaag 2

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,495,701,893
Number of extensions: 85522945
Number of successful extensions: 7138515
Number of sequences better than 10.0: 282
Length of query: 1366
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1342
Effective length of database: 97,308,875,965
Effective search space: 130588511545030
Effective search space used: 130588511545030
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 1
Homology vs Protein
Query= Contig-U12025-1 (Contig-U12025-1Q) /CSM_Contig/Contig-U12025-1Q.Seq.d
(1366 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AM433721_7(AM433721|pid:none) Vitis vinifera contig VV78X233805.... 191 5e-47
BT042191_1(BT042191|pid:none) Zea mays full-length cDNA clone ZM... 186 2e-45
AX528684_1(AX528684|pid:none) Sequence 17 from Patent WO0246443. 184 8e-45
AL928727_1(AL928727|pid:none) Zebrafish DNA sequence from clone ... 182 2e-44
S39059(S39059)protein BRG1 - human 181 5e-44
X91638_1(X91638|pid:none) G.gallus mRNA for BRM protein. 181 5e-44
AK299683_1(AK299683|pid:none) Homo sapiens cDNA FLJ53181 partial... 181 7e-44
AK135871_1(AK135871|pid:none) Mus musculus in vitro fertilized e... 181 7e-44
BC022975_1(BC022975|pid:none) Mus musculus SWI/SNF related, matr... 181 7e-44
AK296373_1(AK296373|pid:none) Homo sapiens cDNA FLJ61591 partial... 181 7e-44
AY643746_1(AY643746|pid:none) Rattus norvegicus SWI/SNF-related ... 181 7e-44
BC142521_1(BC142521|pid:none) Bos taurus SWI/SNF related, matrix... 181 7e-44
BC075641_1(BC075641|pid:none) Mus musculus SWI/SNF related, matr... 181 7e-44
AL138755_5(AL138755|pid:none) Human DNA sequence from clone RP11... 181 7e-44
BC056199_1(BC056199|pid:none) Mus musculus SWI/SNF related, matr... 181 7e-44
EU430758_1(EU430758|pid:none) Homo sapiens SMARCA4 isoform 4 mRN... 180 1e-43
BC136644_1(BC136644|pid:none) Homo sapiens SWI/SNF related, matr... 180 1e-43
AK160825_1(AK160825|pid:none) Mus musculus 10 days embryo whole ... 180 1e-43
EU430757_1(EU430757|pid:none) Homo sapiens SMARCA4 isoform 2 mRN... 180 1e-43
EU430756_1(EU430756|pid:none) Homo sapiens SMARCA4 isoform 3 mRN... 178 4e-43
I53078(I53078) homeotic gene regulator - mouse (fragment) &S681... 178 4e-43
AK147047_1(AK147047|pid:none) Mus musculus 17 days embryo kidney... 178 4e-43
AK303352_1(AK303352|pid:none) Homo sapiens cDNA FLJ60382 complet... 178 4e-43
BC060229_1(BC060229|pid:none) Mus musculus SWI/SNF related, matr... 178 4e-43
BC153216_1(BC153216|pid:none) Bos taurus SWI/SNF related, matrix... 178 4e-43
AJ504723_1(AJ504723|pid:none) Rattus norvegicus partial mRNA for... 178 4e-43
AK166837_1(AK166837|pid:none) Mus musculus blastocyst blastocyst... 178 4e-43
AC006127_1(AC006127|pid:none) Homo sapiens chromosome 19, cosmid... 178 4e-43
D26155_1(D26155|pid:none) Homo sapiens mRNA for transcriptional ... 178 5e-43
EU780789_1(EU780789|pid:none) Sus scrofa Smarca4-like protein mR... 177 1e-42
AY205256_1(AY205256|pid:none) Danio rerio brahma protein-like pr... 177 1e-42
U64598_15(U64598|pid:none) Caenorhabditis elegans cosmid C52B9, ... 171 4e-41
AM270388_18(AM270388|pid:none) Aspergillus niger contig An17c006... 171 6e-41
AY303939_1(AY303939|pid:none) Pichia angusta global transcriptio... 171 7e-41
CU928171_378(CU928171|pid:none) Kluyveromyces thermotolerans str... 167 8e-40
AF254822_1(AF254822|pid:none) Homo sapiens SMARCA4 isoform (SMAR... 166 1e-39
D26156_1(D26156|pid:none) Homo sapiens mRNA for transcriptional ... 166 1e-39
AK299761_1(AK299761|pid:none) Homo sapiens cDNA FLJ60344 complet... 166 1e-39
(P51532) RecName: Full=Probable global transcription activator S... 166 1e-39
FN357499_5(FN357499|pid:none) Schistosoma mansoni genome sequenc... 166 1e-39
CP001323_433(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 166 2e-39
AM920436_1738(AM920436|pid:none) Penicillium chrysogenum Wiscons... 166 2e-39
A42091(A42091) transcription activator SNF2/SWI2 homolog brm - f... 166 2e-39
AE014296_2753(AE014296|pid:none) Drosophila melanogaster chromos... 166 2e-39
AF230280_1(AF230280|pid:none) Caenorhabditis elegans SWI2/SNF2-l... 165 4e-39
FM992689_189(FM992689|pid:none) Candida dubliniensis CD36 chromo... 164 5e-39
BC151849_1(BC151849|pid:none) Synthetic construct Homo sapiens c... 163 1e-38
AY268943_1(AY268943|pid:none) Tetrahymena thermophila strain Cu4... 163 2e-38
CP000498_251(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 162 2e-38
CR382139_133(CR382139|pid:none) Debaryomyces hansenii strain CBS... 159 2e-37
AE016818_715(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 159 2e-37
AE016819_795(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 159 2e-37
CR382126_197(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 159 3e-37
CR380953_373(CR380953|pid:none) Candida glabrata strain CBS138 c... 158 4e-37
(P32597) RecName: Full=Nuclear protein STH1/NPS1; EC=3.... 156 1e-36
AE017351_199(AE017351|pid:none) Cryptococcus neoformans var. neo... 156 1e-36
(P22082) RecName: Full=Transcription regulatory protein SNF2; ... 156 2e-36
(O94421) RecName: Full=SWI/SNF chromatin-remodeling complex subu... 155 3e-36
AL034491_14(AL034491|pid:none) S.pombe chromosome III cosmid c16... 155 3e-36
FM992690_238(FM992690|pid:none) Candida dubliniensis CD36 chromo... 155 3e-36
FN392320_1198(FN392320|pid:none) Pichia pastoris GS115 chromosom... 151 6e-35
(Q9UTN6) RecName: Full=Chromatin structure-remodeling complex su... 150 8e-35
CP000502_77(CP000502|pid:none) Pichia stipitis CBS 6054 chromoso... 146 1e-33
AX528676_1(AX528676|pid:none) Sequence 9 from Patent WO0246443. 146 2e-33
AE001362_151(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 132 3e-29
AM910986_40(AM910986|pid:none) Plasmodium knowlesi strain H chro... 127 9e-28
AY927849_1(AY927849|pid:none) Arabidopsis thaliana SPLAYED splic... 126 2e-27
AP003490_13(AP003490|pid:none) Oryza sativa Japonica Group genom... 122 2e-26
AE016819_194(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 120 1e-25
FN357305_17(FN357305|pid:none) Schistosoma mansoni genome sequen... 118 6e-25
BC143954_1(BC143954|pid:none) Homo sapiens SWI/SNF related, matr... 118 6e-25
CR382126_291(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 118 6e-25
(P28370) RecName: Full=Probable global transcription activator S... 118 6e-25
AL022577_2(AL022577|pid:none) Human DNA sequence from clone RP3-... 118 6e-25
AL022577_4(AL022577|pid:none) Human DNA sequence from clone RP3-... 118 6e-25
M89907_1(M89907|pid:none) Human global transcription activator h... 118 6e-25
CR380949_58(CR380949|pid:none) Candida glabrata strain CBS138 ch... 117 1e-24
BC154479_1(BC154479|pid:none) Danio rerio helicase, lymphoid-spe... 117 1e-24
BC016071_1(BC016071|pid:none) Mus musculus SWI/SNF related, matr... 117 1e-24
(Q6PGB8) RecName: Full=Probable global transcription activator S... 117 1e-24
FN392320_922(FN392320|pid:none) Pichia pastoris GS115 chromosome... 117 1e-24
AL935288_3(AL935288|pid:none) Zebrafish DNA sequence from clone ... 117 1e-24
CR857590_1(CR857590|pid:none) Pongo abelii mRNA; cDNA DKFZp459M1... 117 1e-24
AF325920_1(AF325920|pid:none) Mus musculus DNA-dependent ATPase ... 117 1e-24
CR848717_1(CR848717|pid:none) Zebrafish DNA sequence from clone ... 116 2e-24
CU928180_235(CU928180|pid:none) Kluyveromyces thermotolerans str... 116 2e-24
CU928176_687(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 115 3e-24
BC020056_1(BC020056|pid:none) Mus musculus helicase, lymphoid sp... 115 4e-24
AY612850_1(AY612850|pid:none) Danio rerio PASG mRNA, complete cds. 115 4e-24
BC100394_1(BC100394|pid:none) Mus musculus helicase, lymphoid sp... 115 4e-24
AK013266_1(AK013266|pid:none) Mus musculus 10, 11 days embryo wh... 115 4e-24
FN392322_123(FN392322|pid:none) Pichia pastoris GS115 chromosome... 115 4e-24
CR382126_1059(CR382126|pid:none) Kluyveromyces lactis strain NRR... 115 4e-24
CP000582_272(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 115 4e-24
JC4666(JC4666)lymphocyte specific helicase - mouse 115 4e-24
BC080870_1(BC080870|pid:none) Xenopus tropicalis SWI/SNF related... 115 5e-24
AF292095_1(AF292095|pid:none) Xenopus laevis imitation switch IS... 115 5e-24
(P38144) RecName: Full=ISWI chromatin-remodeling complex ATPase ... 115 5e-24
S46122(S46122)SNF2 protein homolog YBR245c - yeast (Saccharomyce... 115 5e-24
AP007150_188(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 115 5e-24
AB102721_1(AB102721|pid:none) Homo sapiens HELLS mRNA for lympho... 114 8e-24
BX538033_1(BX538033|pid:none) Homo sapiens mRNA; cDNA DKFZp686J0... 114 8e-24
AB102718_1(AB102718|pid:none) Homo sapiens HELLS mRNA for lympho... 114 8e-24
AX356104_1(AX356104|pid:none) Sequence 1 from Patent WO0190320. 114 8e-24
CR954202_161(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 114 8e-24
AK001201_1(AK001201|pid:none) Homo sapiens cDNA FLJ10339 fis, cl... 114 8e-24
(Q76H81) RecName: Full=Lymphoid-specific helicase; EC=3... 114 8e-24
AB102719_1(AB102719|pid:none) Homo sapiens HELLS mRNA for lympho... 114 8e-24
AB102723_1(AB102723|pid:none) Homo sapiens HELLS mRNA for lympho... 114 8e-24
AP004096_24(AP004096|pid:none) Oryza sativa Japonica Group genom... 114 1e-23
AF325921_1(AF325921|pid:none) Mus musculus DNA-dependent ATPase ... 114 1e-23
AK039811_1(AK039811|pid:none) Mus musculus 0 day neonate thymus ... 114 1e-23
AK316444_1(AK316444|pid:none) Homo sapiens cDNA, FLJ79343 comple... 114 1e-23
AB210714_1(AB210714|pid:none) Ciona intestinalis Ci-SWI/SNF mRNA... 114 1e-23
BC153225_1(BC153225|pid:none) Bos taurus SWI/SNF related, matrix... 114 1e-23
(Q91ZW3) RecName: Full=SWI/SNF-related matrix-associated actin-d... 114 1e-23
AB172055_1(AB172055|pid:none) Macaca fascicularis brain cDNA clo... 113 1e-23
AE017351_304(AE017351|pid:none) Cryptococcus neoformans var. neo... 113 1e-23
(O14139) RecName: Full=Chromodomain helicase hrp3; EC=3... 113 2e-23
CR382131_97(CR382131|pid:none) Yarrowia lipolytica strain CLIB12... 112 2e-23
AB113249_1(AB113249|pid:none) Homo sapiens HELLS mRNA for lympho... 112 2e-23
BC124094_1(BC124094|pid:none) Danio rerio helicase, lymphoid-spe... 112 2e-23
CU633901_345(CU633901|pid:none) Podospora anserina genomic DNA c... 112 2e-23
CU928179_909(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 112 3e-23
(Q8RWY3) RecName: Full=Putative chromatin-remodeling complex ATP... 112 3e-23
(Q9US25) RecName: Full=Chromodomain helicase hrp1; EC=3... 112 4e-23
AY095050_1(AY095050|pid:none) Drosophila melanogaster LD39323 fu... 112 4e-23
AB284258_1(AB284258|pid:none) Brassica rapa DDM1 gene for decrea... 112 4e-23
BT011071_1(BT011071|pid:none) Drosophila melanogaster SD21488 fu... 112 4e-23
(Q08773) RecName: Full=ISWI chromatin-remodeling complex ATPase ... 112 4e-23
(Q6CJ38) RecName: Full=Helicase SWR1; EC=3.6.1.-; &CR3... 111 5e-23
EU730899_1(EU730899|pid:none) Brachypodium distachyon clone BAC ... 111 5e-23
Z92970_2(Z92970|pid:none) Caenorhabditis elegans Fosmid H06O01, ... 111 5e-23
AB074174_1(AB074174|pid:none) Homo sapiens primary neuroblastoma... 111 5e-23
T23056(T23056)chromodomain helicase H06O01.2 - Caenorhabditis el... 111 5e-23
CR954207_416(CR954207|pid:none) Ostreococcus tauri strain OTTH05... 111 5e-23
AB331397_1(AB331397|pid:none) Brassica rapa DDM1b gene for decre... 111 5e-23
CU633455_71(CU633455|pid:none) Podospora anserina genomic DNA ch... 111 7e-23
AM270162_16(AM270162|pid:none) Aspergillus niger contig An08c007... 111 7e-23
AB018119_14(AB018119|pid:none) Arabidopsis thaliana genomic DNA,... 111 7e-23
S44645(S44645;T16288)hypothetical protein F37A4.8 - Caenorhabdit... 111 7e-23
CR940347_289(CR940347|pid:none) Theileria annulata strain Ankara... 110 9e-23
CU928180_627(CU928180|pid:none) Kluyveromyces thermotolerans str... 110 9e-23
AP007169_330(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 110 9e-23
AY333120_1(AY333120|pid:none) Arabidopsis arenosa Swi2/Snf2-rela... 110 9e-23
AM920431_481(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 110 9e-23
AY091030_1(AY091030|pid:none) Arabidopsis thaliana putative ATPa... 110 9e-23
CP000500_338(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 110 1e-22
AC146936_20(AC146936|pid:none) Oryza sativa (japonica cultivar-g... 110 1e-22
BC168798_1(BC168798|pid:none) Xenopus tropicalis cDNA clone MGC:... 110 1e-22
BC077794_1(BC077794|pid:none) Xenopus laevis helicase, lymphoid-... 110 2e-22
BC142881_1(BC142881|pid:none) Danio rerio SWI/SNF related, matri... 110 2e-22
BX470255_2(BX470255|pid:none) Zebrafish DNA sequence from clone ... 110 2e-22
AY279398_1(AY279398|pid:none) Arabidopsis thaliana photoperiod i... 110 2e-22
CR954217_197(CR954217|pid:none) Ostreococcus tauri strain OTTH05... 110 2e-22
BC133097_1(BC133097|pid:none) Danio rerio SWI/SNF related, matri... 110 2e-22
CP000496_810(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 109 2e-22
AC012647_4(AC012647|pid:none) Trypanosoma brucei chromosome 2 cl... 109 2e-22
CR382129_11(CR382129|pid:none) Yarrowia lipolytica strain CLIB12... 109 2e-22
FN357312_11(FN357312|pid:none) Schistosoma mansoni genome sequen... 109 2e-22
FN357312_10(FN357312|pid:none) Schistosoma mansoni genome sequen... 109 2e-22
AE016820_492(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 109 2e-22
CU928174_486(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 109 2e-22
CU928171_608(CU928171|pid:none) Kluyveromyces thermotolerans str... 109 2e-22
BC029381_1(BC029381|pid:none) Homo sapiens helicase, lymphoid-sp... 109 3e-22
FM992690_580(FM992690|pid:none) Candida dubliniensis CD36 chromo... 109 3e-22
AP008215_745(AP008215|pid:none) Oryza sativa (japonica cultivar-... 108 3e-22
AC011806_3(AC011806|pid:none) Genomic Sequence For Oryza sativa ... 108 3e-22
AP005419_19(AP005419|pid:none) Oryza sativa Japonica Group genom... 108 3e-22
CU928165_133(CU928165|pid:none) Kluyveromyces thermotolerans str... 108 3e-22
BX538352_70(BX538352|pid:none) Cryptosporidium parvum chromosome... 108 3e-22
BC059235_1(BC059235|pid:none) Mus musculus INO80 complex homolog... 108 5e-22
DQ402511_1(DQ402511|pid:none) Bombyx mori CHD1 (CHD1) mRNA, comp... 108 5e-22
AK129317_1(AK129317|pid:none) Mus musculus premature mRNA for mK... 108 5e-22
AB033085_1(AB033085|pid:none) Homo sapiens mRNA for KIAA1259 pro... 108 6e-22
(B0R0I6) RecName: Full=Chromodomain-helicase-DNA-binding protein... 108 6e-22
(Q9ULG1) RecName: Full=Putative DNA helicase INO80 complex homol... 108 6e-22
AF181824_1(AF181824|pid:none) Aegolius funereus chromosome W chr... 108 6e-22
BT067025_1(BT067025|pid:none) Zea mays full-length cDNA clone ZM... 108 6e-22
AL928674_21(AL928674|pid:none) Zebrafish DNA sequence from clone... 108 6e-22
CT005272_536(CT005272|pid:none) Leishmania major strain Friedlin... 108 6e-22
AE016817_302(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 108 6e-22
AF461813_1(AF461813|pid:none) Zea mays chromatin complex subunit... 108 6e-22
(P43610) RecName: Full=Uncharacterized ATP-dependent helicase YF... 107 8e-22
AL391737_32(AL391737|pid:none) chromosome I of strain GB-M1 of E... 107 8e-22
AK079035_1(AK079035|pid:none) Mus musculus adult male epididymis... 107 1e-21
AF181828_1(AF181828|pid:none) Nymphicus hollandicus chromosome Z... 107 1e-21
CR382125_177(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 107 1e-21
(Q6FK48) RecName: Full=Helicase SWR1; EC=3.6.1.-; &CR3... 107 1e-21
AY217131_1(AY217131|pid:none) Taeniopygia guttata chromo-helicas... 107 1e-21
(Q8RXS6) RecName: Full=DNA helicase INO80 complex homolog 1; ... 107 1e-21
AY080695_1(AY080695|pid:none) Arabidopsis thaliana putative heli... 107 1e-21
CR380958_504(CR380958|pid:none) Candida glabrata strain CBS138 c... 107 1e-21
D14316_1(D14316|pid:none) Gallus gallus mRNA for delta-crystalli... 107 1e-21
(Q05471) RecName: Full=Helicase SWR1; EC=3.6.1.-; AltNa... 107 1e-21
AF004397_1(AF004397|pid:none) Gallus gallus chromo-helicase-DNA-... 107 1e-21
CR940347_357(CR940347|pid:none) Theileria annulata strain Ankara... 107 1e-21
AL929049_3(AL929049|pid:none) Zebrafish DNA sequence from clone ... 106 2e-21
CP000592_288(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 106 2e-21
(Q6BKC2) RecName: Full=Helicase SWR1; EC=3.6.1.-; &CR3... 106 2e-21
(O13682) RecName: Full=Helicase swr1; EC=3.6.1.-; &CU3... 106 2e-21
AL590430_1(AL590430|pid:none) Mouse DNA sequence from clone RP23... 105 3e-21
(O14646) RecName: Full=Chromodomain-helicase-DNA-binding protein... 105 3e-21
AL590430_2(AL590430|pid:none) Mouse DNA sequence from clone RP23... 105 3e-21
BC115822_1(BC115822|pid:none) Mus musculus chromodomain helicase... 105 3e-21
(P40201) RecName: Full=Chromodomain-helicase-DNA-binding protein... 105 3e-21
FM992695_429(FM992695|pid:none) Candida dubliniensis CD36 chromo... 105 3e-21
(Q0UG82) RecName: Full=Putative DNA helicase INO80; EC=... 105 3e-21
AK221299_1(AK221299|pid:none) Arabidopsis thaliana mRNA for pseu... 105 3e-21
CU633872_184(CU633872|pid:none) Podospora anserina genomic DNA c... 105 3e-21
BC150806_1(BC150806|pid:none) Mus musculus chromodomain helicase... 105 3e-21
(Q759G7) RecName: Full=Helicase SWR1; EC=3.6.1.-; &AE0... 105 3e-21
FN392320_97(FN392320|pid:none) Pichia pastoris GS115 chromosome ... 105 3e-21
BC117134_1(BC117134|pid:none) Homo sapiens chromodomain helicase... 105 3e-21
AY069786_1(AY069786|pid:none) Drosophila melanogaster SD02886 fu... 105 4e-21
FJ515838_1(FJ515838|pid:none) Homo sapiens isolate CHD2-VI-T chr... 105 4e-21
AK292850_1(AK292850|pid:none) Homo sapiens cDNA FLJ76689 partial... 105 4e-21
AF006514_1(AF006514|pid:none) Homo sapiens CHD2 mRNA, complete c... 105 4e-21
AK017912_1(AK017912|pid:none) Mus musculus adult male thymus cDN... 105 4e-21
(Q9VDY1) RecName: Full=Putative DNA helicase Ino80; Sho... 105 4e-21
AE014185_229(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 105 5e-21
AB037837_1(AB037837|pid:none) Homo sapiens mRNA for KIAA1416 pro... 105 5e-21
(A2AJK6) RecName: Full=Chromodomain-helicase-DNA-binding protein... 105 5e-21
(Q9H6D4) RecName: Full=Chromodomain-helicase-DNA-binding protein... 105 5e-21
AP008213_1862(AP008213|pid:none) Oryza sativa (japonica cultivar... 105 5e-21
AM910988_83(AM910988|pid:none) Plasmodium knowlesi strain H chro... 105 5e-21
FN392322_137(FN392322|pid:none) Pichia pastoris GS115 chromosome... 105 5e-21
BC168553_1(BC168553|pid:none) Xenopus tropicalis chromodomain he... 105 5e-21
(Q4IL82) RecName: Full=Putative DNA helicase INO80; EC=... 105 5e-21
(Q6CA87) RecName: Full=Helicase SWR1; EC=3.6.1.-; &CR3... 105 5e-21
FM992690_120(FM992690|pid:none) Candida dubliniensis CD36 chromo... 105 5e-21
AB037756_1(AB037756|pid:none) Homo sapiens mRNA for KIAA1335 pro... 105 5e-21
CP000500_641(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 104 6e-21
AY647157_1(AY647157|pid:none) Homo sapiens KISH2 (KISH2) mRNA, c... 104 6e-21
AP007161_494(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 104 6e-21
DQ333316_1(DQ333316|pid:none) Homo sapiens PRIC320 isoform 1 mRN... 104 6e-21
BC052963_1(BC052963|pid:none) Homo sapiens Snf2-related CBP acti... 104 6e-21
AF143946_1(AF143946|pid:none) Homo sapiens transcriptional activ... 104 6e-21
(Q3L8U1) RecName: Full=Chromodomain-helicase-DNA-binding protein... 104 6e-21
(Q6ZRS2) RecName: Full=Helicase SRCAP; EC=3.6.1.-; AltN... 104 6e-21
BC172428_1(BC172428|pid:none) Synthetic construct Homo sapiens c... 104 6e-21
(Q8BYH8) RecName: Full=Chromodomain-helicase-DNA-binding protein... 104 6e-21
AB384457_1(AB384457|pid:none) Synthetic construct DNA, clone: pF... 104 6e-21
DQ059482_1(DQ059482|pid:none) Homo sapiens ciprofibrate bound pr... 104 6e-21
(Q8TBR9) RecName: Full=Chromodomain-helicase-DNA-binding protein... 104 8e-21
(Q4IAK7) RecName: Full=Helicase SWR1; EC=3.6.1.-; 104 8e-21
BC156439_1(BC156439|pid:none) Synthetic construct Homo sapiens c... 104 8e-21
(Q9NEL2) RecName: Full=Helicase ssl-1; EC=3.6.1.-; AltN... 104 8e-21
(Q9JIX5) RecName: Full=Chromodomain-helicase-DNA-binding protein... 104 8e-21
(Q09XV5) RecName: Full=Chromodomain-helicase-DNA-binding protein... 104 8e-21
AB046784_1(AB046784|pid:none) Homo sapiens mRNA for KIAA1564 pro... 104 8e-21
(Q5BAZ5) RecName: Full=Putative DNA helicase ino80; EC=... 104 8e-21
(Q7S133) RecName: Full=Helicase swr-1; EC=3.6.1.-; 104 8e-21
BC168549_1(BC168549|pid:none) Xenopus tropicalis cDNA clone MGC:... 103 1e-20
BX649606_44(BX649606|pid:none) Aspergillus fumigatus BAC pilot p... 103 1e-20
(B5DE69) RecName: Full=Chromodomain-helicase-DNA-binding protein... 103 1e-20
AM270168_148(AM270168|pid:none) Aspergillus niger contig An08c01... 103 1e-20
AL713629_19(AL713629|pid:none) Aspergillus fumigatus BAC AFA5C11. 103 1e-20
AC141111_14(AC141111|pid:none) Medicago truncatula clone mth2-20... 103 1e-20
FM992689_685(FM992689|pid:none) Candida dubliniensis CD36 chromo... 103 2e-20
AK296955_1(AK296955|pid:none) Homo sapiens cDNA FLJ59295 partial... 103 2e-20
(Q59U81) RecName: Full=Helicase SWR1; EC=3.6.1.-; 103 2e-20
AE017349_101(AE017349|pid:none) Cryptococcus neoformans var. neo... 103 2e-20
AY051813_1(AY051813|pid:none) Drosophila melanogaster LD32234 fu... 102 2e-20
AY058653_1(AY058653|pid:none) Drosophila melanogaster LD35434 fu... 102 2e-20
AE013599_3388(AE013599|pid:none) Drosophila melanogaster chromos... 102 2e-20
AF254373_1(AF254373|pid:none) Drosophila melanogaster DOMINO B (... 102 2e-20
BT044534_1(BT044534|pid:none) Drosophila melanogaster LP03212 fu... 102 2e-20
AM920437_355(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 102 2e-20
AE013599_3390(AE013599|pid:none) Drosophila melanogaster chromos... 102 2e-20
(Q4WAS9) RecName: Full=Helicase swr1; EC=3.6.1.-; 102 3e-20
(A1C9W6) RecName: Full=Putative DNA helicase ino80; EC=... 102 4e-20
T33152(T33152)hypothetical protein T04D1.4 - Caenorhabditis eleg... 102 4e-20
(A1CZE5) RecName: Full=Putative DNA helicase ino80; EC=... 102 4e-20
AM920427_717(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 101 6e-20
CR382133_515(CR382133|pid:none) Debaryomyces hansenii strain CBS... 101 6e-20
(A7EQA8) RecName: Full=Putative DNA helicase INO80; EC=... 101 6e-20
(A2R9H9) RecName: Full=Putative DNA helicase ino80; EC=... 101 6e-20
(Q872I5) RecName: Full=Putative DNA helicase ino-80; EC... 101 7e-20
BX294010_4(BX294010|pid:none) Neurospora crassa DNA linkage grou... 101 7e-20
CR940347_91(CR940347|pid:none) Theileria annulata strain Ankara ... 100 9e-20
AF007780_1(AF007780|pid:none) Drosophila melanogaster CHD3 mRNA,... 100 1e-19
AM270258_21(AM270258|pid:none) Aspergillus niger contig An12c001... 100 2e-19
AE014296_3433(AE014296|pid:none) Drosophila melanogaster chromos... 100 2e-19
(Q5ARK3) RecName: Full=Helicase swr1; EC=3.6.1.-; 100 2e-19
(Q5K8T2) RecName: Full=Helicase SWR1; EC=3.6.1.-; &AE0... 100 2e-19
AF119716_1(AF119716|pid:none) Drosophila melanogaster dMi-2 prot... 100 2e-19
AM920436_1170(AM920436|pid:none) Penicillium chrysogenum Wiscons... 100 2e-19
FN357317_37(FN357317|pid:none) Schistosoma mansoni genome sequen... 100 2e-19
(Q3B7N1) RecName: Full=Chromodomain-helicase-DNA-binding protein... 99 3e-19
AE014134_63(AE014134|pid:none) Drosophila melanogaster chromosom... 99 4e-19
(O14148) RecName: Full=Putative DNA helicase ino80; EC=... 99 4e-19
AE014134_62(AE014134|pid:none) Drosophila melanogaster chromosom... 99 4e-19
T38489(T38489) helicase - fission yeast (Schizosaccharomyces pom... 99 4e-19
AF308445_1(AF308445|pid:none) Caenorhabditis elegans LET-418 (le... 99 5e-19
FN392319_386(FN392319|pid:none) Pichia pastoris GS115 chromosome... 99 5e-19
AK027631_1(AK027631|pid:none) Homo sapiens cDNA FLJ14725 fis, cl... 98 6e-19
AK297135_1(AK297135|pid:none) Homo sapiens cDNA FLJ55722 complet... 98 6e-19
CR940352_114(CR940352|pid:none) Theileria annulata strain Ankara... 98 6e-19
AX876540_1(AX876540|pid:none) Sequence 11445 from Patent EP10746... 98 6e-19
AK001342_1(AK001342|pid:none) Homo sapiens cDNA FLJ10480 fis, cl... 98 6e-19
EF560738_1(EF560738|pid:none) Homo sapiens clone DKFZp686J1099 C... 98 6e-19
AL356378_7(AL356378|pid:none) Human DNA sequence from clone RP11... 98 6e-19
B84645(B84645)hypothetical protein At2g25170 [imported] - Arabid... 98 8e-19
AK229409_1(AK229409|pid:none) Arabidopsis thaliana mRNA for puta... 98 8e-19
BC057567_1(BC057567|pid:none) Mus musculus chromodomain helicase... 98 8e-19
(Q9S775) RecName: Full=CHD3-type chromatin-remodeling factor PIC... 98 8e-19
AP007150_191(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 97 1e-18
CP000585_159(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 97 1e-18
AM269978_13(AM269978|pid:none) Aspergillus niger contig An01c031... 97 1e-18
AY699010_1(AY699010|pid:none) Arabidopsis thaliana SWI2/SNF2-lik... 97 2e-18
CR382131_364(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 97 2e-18
AY699011_1(AY699011|pid:none) Arabidopsis thaliana SWI2/SNF2-lik... 97 2e-18
AC005936_13(AC005936|pid:none) Arabidopsis thaliana chromosome 2... 97 2e-18
(Q22516) RecName: Full=Chromodomain-helicase-DNA-binding protein... 96 2e-18
CP001575_509(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 96 2e-18
(Q6BGY8) RecName: Full=Putative DNA helicase INO80; EC=... 96 3e-18
(Q4PGL2) RecName: Full=Putative DNA helicase INO80; EC=... 96 3e-18
U91543_1(U91543|pid:none) Homo sapiens zinc-finger helicase (hZF... 96 4e-18
AY903245_1(AY903245|pid:none) Rattus norvegicus strain WHD chrom... 96 4e-18
AL606628_18(AL606628|pid:none) Oryza sativa genomic DNA, chromos... 96 4e-18
AL596125_1(AL596125|pid:none) Mouse DNA sequence from clone RP23... 96 4e-18
(Q12873) RecName: Full=Chromodomain-helicase-DNA-binding protein... 96 4e-18
(Q7ZU90) RecName: Full=Chromodomain-helicase-DNA-binding protein... 96 4e-18
AY903247_1(AY903247|pid:none) Rattus norvegicus strain SHRSP chr... 96 4e-18
BC156472_1(BC156472|pid:none) Synthetic construct Homo sapiens c... 96 4e-18
AL596125_2(AL596125|pid:none) Mouse DNA sequence from clone RP23... 96 4e-18
CP000496_494(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 96 4e-18
FN357585_11(FN357585|pid:none) Schistosoma mansoni genome sequen... 95 5e-18
AK140386_1(AK140386|pid:none) Mus musculus 4 days neonate thymus... 95 5e-18
(Q74Z27) RecName: Full=Putative DNA helicase INO80; EC=... 95 5e-18
CP001142_300(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 95 7e-18
(Q6EVK6) RecName: Full=ATP-dependent helicase BRM; Shor... 94 9e-18
CR954201_555(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 94 9e-18
CP001577_493(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 94 9e-18
AL049607_10(AL049607|pid:none) Arabidopsis thaliana DNA chromoso... 94 9e-18
(P53115) RecName: Full=Putative DNA helicase INO80; EC=... 94 1e-17
AK296937_1(AK296937|pid:none) Homo sapiens cDNA FLJ59330 complet... 94 1e-17
AY062186_1(AY062186|pid:none) Oryza sativa chromatin-remodeling ... 94 1e-17
AP008212_463(AP008212|pid:none) Oryza sativa (japonica cultivar-... 94 1e-17
(Q5KHM0) RecName: Full=Putative DNA helicase INO80; EC=... 94 1e-17
AP005919_4(AP005919|pid:none) Oryza sativa Japonica Group genomi... 94 1e-17
Z48618_5(Z48618|pid:none) S.cerevisiae genes for RAD54, ACE1(CUP... 94 1e-17
(A7TJI3) RecName: Full=Putative DNA helicase INO80; EC=... 94 1e-17
AX528672_1(AX528672|pid:none) Sequence 5 from Patent WO0246443. 94 1e-17
CP001334_203(CP001334|pid:none) Micromonas sp. RCC299 chromosome... 94 1e-17
CU928173_103(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 94 1e-17
FN357294_49(FN357294|pid:none) Schistosoma mansoni genome sequen... 94 1e-17
CR382132_1273(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 93 2e-17
AK153826_1(AK153826|pid:none) Mus musculus 2 days neonate thymus... 92 3e-17
(Q14839) RecName: Full=Chromodomain-helicase-DNA-binding protein... 92 3e-17
T20986(T20986;T26315)hypothetical protein F15D4.1 - Caenorhabdit... 92 3e-17
(Q6PDQ2) RecName: Full=Chromodomain-helicase-DNA-binding protein... 92 3e-17
AK220473_1(AK220473|pid:none) Mus musculus mRNA for mKIAA4075 pr... 92 3e-17
BC006035_1(BC006035|pid:none) Mus musculus chromodomain helicase... 92 3e-17
AL110281_1(AL110281|pid:none) Homo sapiens mRNA; cDNA DKFZp434K2... 92 4e-17
AL117491_1(AL117491|pid:none) Homo sapiens mRNA; cDNA DKFZp434N2... 92 4e-17
CS300694_1(CS300694|pid:none) Sequence 202 from Patent EP1661986. 92 4e-17
AB007913_1(AB007913|pid:none) Homo sapiens mRNA for KIAA0444 pro... 92 4e-17
BC046866_1(BC046866|pid:none) Xenopus laevis chromodomain helica... 92 4e-17
BC133719_1(BC133719|pid:none) Xenopus tropicalis chromodomain he... 92 4e-17
(Q8TDI0) RecName: Full=Chromodomain-helicase-DNA-binding protein... 92 4e-17
AM910987_113(AM910987|pid:none) Plasmodium knowlesi strain H chr... 92 6e-17
CP001575_88(CP001575|pid:none) Micromonas sp. RCC299 chromosome ... 91 7e-17
CP000591_41(CP000591|pid:none) Ostreococcus lucimarinus CCE9901 ... 91 1e-16
AP003227_41(AP003227|pid:none) Oryza sativa Japonica Group genom... 91 1e-16
AM910993_249(AM910993|pid:none) Plasmodium knowlesi strain H chr... 91 1e-16
AY815356_1(AY815356|pid:none) Schistosoma japonicum SJCHGC06070 ... 91 1e-16
AP007150_297(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 91 1e-16
AE014134_1792(AE014134|pid:none) Drosophila melanogaster chromos... 91 1e-16
CP000581_576(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 90 2e-16
CP001330_7(CP001330|pid:none) Micromonas sp. RCC299 chromosome 1... 90 2e-16
CP000498_551(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 89 3e-16
(Q9P793) RecName: Full=Chromatin remodeling factor mit1; ... 89 4e-16
AB287295_1(AB287295|pid:none) Mus musculus TAF170 mRNA for TBP-a... 89 5e-16
AK088840_1(AK088840|pid:none) Mus musculus 2 days neonate thymus... 89 5e-16
AB016874_14(AB016874|pid:none) Arabidopsis thaliana genomic DNA,... 89 5e-16
BX530089_4(BX530089|pid:none) Zebrafish DNA sequence from clone ... 88 6e-16
CU633900_558(CU633900|pid:none) Podospora anserina genomic DNA c... 88 6e-16
Z81089_4(Z81089|pid:none) Caenorhabditis elegans Cosmid F53H4, c... 88 6e-16
CR382126_326(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 88 6e-16
AE017345_475(AE017345|pid:none) Cryptococcus neoformans var. neo... 88 6e-16
AM920435_725(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 88 8e-16
AM920428_231(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 88 8e-16
CR382135_682(CR382135|pid:none) Debaryomyces hansenii strain CBS... 87 1e-15
CP000497_623(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 87 1e-15
CP001326_138(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 87 1e-15
AK066228_1(AK066228|pid:none) Oryza sativa Japonica Group cDNA c... 87 2e-15
AL137080_15(AL137080|pid:none) Arabidopsis thaliana DNA chromoso... 87 2e-15
BT001892_1(BT001892|pid:none) Drosophila melanogaster SD16865 fu... 87 2e-15
AM452412_1(AM452412|pid:none) Vitis vinifera contig VV78X221725.... 87 2e-15
BT003614_1(BT003614|pid:none) Drosophila melanogaster GH12153 fu... 87 2e-15
AE014297_2206(AE014297|pid:none) Drosophila melanogaster chromos... 87 2e-15
CR382125_983(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 86 2e-15
FN392320_1272(FN392320|pid:none) Pichia pastoris GS115 chromosom... 86 2e-15
CR382132_1194(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 86 3e-15
FN357508_4(FN357508|pid:none) Schistosoma mansoni genome sequenc... 85 5e-15
CP000312_1562(CP000312|pid:none) Clostridium perfringens SM101, ... 85 5e-15
CT005253_88(CT005253|pid:none) Leishmania major strain Friedlin,... 85 5e-15
BA000016_1625(BA000016|pid:none) Clostridium perfringens str. 13... 85 5e-15
AL844507_178(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 85 5e-15
FJ427399_1(FJ427399|pid:none) Triticum turgidum clone BAC 738D05... 85 7e-15
EU730901_22(EU730901|pid:none) Brachypodium distachyon clone BAC... 85 7e-15
CU928176_224(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 85 7e-15
AY816030_1(AY816030|pid:none) Schistosoma japonicum SJCHGC05261 ... 85 7e-15
GN099095_1(GN099095|pid:none) Sequence 3876 from Patent WO200903... 85 7e-15
BC005038_1(BC005038|pid:none) Homo sapiens chromodomain helicase... 85 7e-15
FJ864113_1(FJ864113|pid:none) Anopheles quadriannulatus isolate ... 85 7e-15
AY485643_5(AY485643|pid:none) Hordeum vulgare subsp. vulgare BAC... 85 7e-15
CU640366_1340(CU640366|pid:none) Podospora anserina genomic DNA ... 84 9e-15
EF540321_7(EF540321|pid:none) Triticum turgidum overlapping clon... 84 9e-15
(P31380) RecName: Full=Uncharacterized ATP-dependent helicase YA... 84 9e-15
AY485644_6(AY485644|pid:none) Triticum monococcum phosphatidylse... 84 9e-15
AP004126_9(AP004126|pid:none) Oryza sativa Japonica Group genomi... 84 9e-15
AM502249_300(AM502249|pid:none) Leishmania infantum chromosome 31. 84 9e-15
AF459085_1(AF459085|pid:none) Hordeum vulgare SNF2P (Snf2P) gene... 84 9e-15
AP007151_1229(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 84 9e-15
AL512768_1(AL512768|pid:none) Homo sapiens mRNA; cDNA DKFZp434A1... 84 1e-14
(Q9H4L7) RecName: Full=SWI/SNF-related matrix-associated actin-d... 84 1e-14
AB169326_1(AB169326|pid:none) Macaca fascicularis testis cDNA, c... 84 1e-14
AK301668_1(AK301668|pid:none) Homo sapiens cDNA FLJ58701 complet... 84 1e-14
AL807369_10(AL807369|pid:none) Neurospora crassa DNA linkage gro... 84 1e-14
AB032948_1(AB032948|pid:none) Homo sapiens mRNA for KIAA1122 pro... 84 1e-14
CU928169_543(CU928169|pid:none) Kluyveromyces thermotolerans str... 84 1e-14
BC042442_1(BC042442|pid:none) Mus musculus SWI/SNF-related, matr... 84 1e-14
AL359929_1(AL359929|pid:none) Homo sapiens mRNA; cDNA DKFZp762K2... 84 1e-14
BC089242_1(BC089242|pid:none) Xenopus tropicalis SWI/SNF-related... 84 1e-14
(Q04692) RecName: Full=SWI/SNF-related matrix-associated actin-d... 84 1e-14
AB385429_1(AB385429|pid:none) Synthetic construct DNA, clone: pF... 84 1e-14
CR954202_487(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 84 2e-14
FM992695_700(FM992695|pid:none) Candida dubliniensis CD36 chromo... 84 2e-14
AE016818_282(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 84 2e-14
AE016816_490(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 83 2e-14
CR380954_234(CR380954|pid:none) Candida glabrata strain CBS138 c... 83 2e-14
AP007171_293(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 83 2e-14
AP003727_27(AP003727|pid:none) Oryza sativa Japonica Group genom... 83 2e-14
BC167234_1(BC167234|pid:none) Synthetic construct Mus musculus c... 83 2e-14
AM502232_88(AM502232|pid:none) Leishmania infantum chromosome 14. 83 2e-14
AL807792_3(AL807792|pid:none) Zebrafish DNA sequence from clone ... 83 3e-14
(Q03468) RecName: Full=DNA excision repair protein ERCC-6; ... 83 3e-14
CU633900_1017(CU633900|pid:none) Podospora anserina genomic DNA ... 83 3e-14
(Q9UR24) RecName: Full=DNA repair protein rhp26; AltName: Full=R... 83 3e-14
CU928180_591(CU928180|pid:none) Kluyveromyces thermotolerans str... 83 3e-14
AP007166_181(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 83 3e-14
AK303022_1(AK303022|pid:none) Homo sapiens cDNA FLJ57242 complet... 83 3e-14
FN392320_672(FN392320|pid:none) Pichia pastoris GS115 chromosome... 82 3e-14
AY548901_1(AY548901|pid:none) Antonospora locustae helicase MOT1... 82 3e-14
CR380955_66(CR380955|pid:none) Candida glabrata strain CBS138 ch... 82 3e-14
AK023990_1(AK023990|pid:none) Homo sapiens cDNA FLJ13928 fis, cl... 82 5e-14
AL021171_1(AL021171|pid:none) Caenorhabditis elegans Fosmid H04D... 82 5e-14
AM270143_13(AM270143|pid:none) Aspergillus niger contig An07c026... 82 5e-14
AE015925_904(AE015925|pid:none) Chlamydophila caviae GPIC, compl... 82 5e-14
(P40352) RecName: Full=DNA repair and recombination protein RAD2... 82 5e-14
BA000008_847(BA000008|pid:none) Chlamydophila pneumoniae J138 ge... 82 5e-14
AC105379_56(AC105379|pid:none) Trypanosoma brucei chromosome 3 c... 82 6e-14
AE001273_725(AE001273|pid:none) Chlamydia trachomatis D/UW-3/CX,... 81 8e-14
CP000051_737(CP000051|pid:none) Chlamydia trachomatis A/HAR-13, ... 81 8e-14
AM746676_2993(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 81 8e-14
CR762493_3(CR762493|pid:none) Zebrafish DNA sequence from clone ... 81 8e-14
T23046(T23046;T23695)hypothetical protein M03C11.8 - Caenorhabdi... 81 8e-14
AE017348_138(AE017348|pid:none) Cryptococcus neoformans var. neo... 81 8e-14
CP000804_3239(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 81 8e-14
AM884177_77(AM884177|pid:none) Chlamydia trachomatis L2b/UCH-1/p... 81 8e-14
CR382126_514(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 81 1e-13
CP000089_3839(CP000089|pid:none) Dechloromonas aromatica RCB, co... 81 1e-13
AP008230_1384(AP008230|pid:none) Desulfitobacterium hafniense Y5... 81 1e-13
CP001078_1985(CP001078|pid:none) Clostridium botulinum E3 str. A... 81 1e-13
AM743169_619(AM743169|pid:none) Stenotrophomonas maltophilia K27... 80 1e-13
CP001326_123(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 80 1e-13
CP000721_2634(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 80 2e-13
AM180355_2250(AM180355|pid:none) Clostridium difficile 630 compl... 80 2e-13
CR954247_39(CR954247|pid:none) Pseudoalteromonas haloplanktis st... 80 2e-13
CP001083_1615(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 80 2e-13
FN357451_6(FN357451|pid:none) Schistosoma mansoni genome sequenc... 80 2e-13
CP001132_1040(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 79 3e-13
AM494962_161(AM494962|pid:none) Leishmania braziliensis chromoso... 79 3e-13
AM412317_1651(AM412317|pid:none) Clostridium botulinum A str. AT... 79 3e-13
CP001083_1772(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 79 3e-13
CP000939_1673(CP000939|pid:none) Clostridium botulinum B1 str. O... 79 3e-13
CR940353_74(CR940353|pid:none) Theileria annulata strain Ankara ... 79 3e-13
CP001393_430(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 79 3e-13
CP001281_3299(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 79 4e-13
AP008957_4070(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 79 4e-13
CP001032_3491(CP001032|pid:none) Opitutus terrae PB90-1, complet... 79 4e-13
(A2BGR3) RecName: Full=DNA excision repair protein ERCC-6-like; ... 79 4e-13
CP000962_1736(CP000962|pid:none) Clostridium botulinum A3 str. L... 79 4e-13
CP001056_2269(CP001056|pid:none) Clostridium botulinum B str. Ek... 79 4e-13
AF462829_1(AF462829|pid:none) Arabidopsis thaliana AT5g63950/MBM... 74 4e-13
CP000724_578(CP000724|pid:none) Alkaliphilus metalliredigens QYM... 79 5e-13
CP000302_2211(CP000302|pid:none) Shewanella denitrificans OS217,... 79 5e-13
CP000764_1367(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 79 5e-13
CP001033_1597(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 79 5e-13
CT005264_212(CT005264|pid:none) Leishmania major strain Friedlin... 79 5e-13
CP000246_1119(CP000246|pid:none) Clostridium perfringens ATCC 13... 78 7e-13
CP000721_2607(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 78 7e-13
CR380959_82(CR380959|pid:none) Candida glabrata strain CBS138 ch... 78 7e-13
CP000312_958(CP000312|pid:none) Clostridium perfringens SM101, c... 78 7e-13
AE001437_3384(AE001437|pid:none) Clostridium acetobutylicum ATCC... 78 7e-13
CP001341_3469(CP001341|pid:none) Arthrobacter chlorophenolicus A... 78 9e-13
CP000612_3196(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 78 9e-13

>AM433721_7(AM433721|pid:none) Vitis vinifera contig VV78X233805.4,
whole genome shotgun sequence.
Length = 399

Score = 191 bits (485), Expect = 5e-47
Identities = 108/225 (48%), Positives = 145/225 (64%), Gaps = 9/225 (4%)
Frame = +3

Query: 666 DSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAHDRCHRIGQTNSVSVFRLI 845
DSP+++F+LST AGGLG+NLQTADTVIIFDSDWNPQMD QA DR HRIGQ V VF L+
Sbjct: 72 DSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLV 131

Query: 846 SANSIEEKILGRATDKLEIDAKIIQAGMFNTHSNDQERRAKLEQFLHGFPNNTLDEVPVD 1025
S SIEE IL RA K+ IDAK+IQAG+FNT S Q+RR LE+ + N+ +VP +
Sbjct: 132 SVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMRRGTNSLGADVPSE 191

Query: 1026 LKEINKLIARDDFEFKQFQEMDKERLKVDQANSKKTRQPIKPRLMIEKELPEWVLATPVT 1205
+EIN+L AR D EF F++MD+ER + ++ + RLM E E+PEW +TP
Sbjct: 192 -REINRLAARSDEEFWMFEKMDEER---------RQKENYRSRLMEEHEVPEWAYSTPDG 241

Query: 1206 DKDED---------IAGKKRSTAIASANSFVHDNLTDNQYARMMK 1313
+++ I GK+R + A D+L+D Q+ + ++
Sbjct: 242 KEEKSKGFEHDASKITGKRRRKEVVYA-----DSLSDLQWMKAVE 281

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,152,828,302
Number of extensions: 45753522
Number of successful extensions: 116716
Number of sequences better than 10.0: 1366
Number of HSP's gapped: 116394
Number of HSP's successfully gapped: 1443
Length of query: 455
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 323
Effective length of database: 623,955,076
Effective search space: 201537489548
Effective search space used: 201537489548
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.68 gvh: 0.25 alm: 0.43 top: 0.53 tms: 0.00 mit: 0.46 mip: 0.10
nuc: 0.08 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: mitochondrial
32.0 %: nuclear
16.0 %: cytoplasmic
8.0 %: cytoskeletal
4.0 %: endoplasmic reticulum

>> prediction for Contig-U12025-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0