| Homology vs DNA |
 Query= Contig-U02054-1 (Contig-U02054-1Q) /CSM_Contig/Contig-U02054-1Q.Seq.d
(490 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ411198) Dictyostelium discoideum cDNA clone:ddv3l07, 5' e... 914 0.0 1
(AL035476) Plasmodium falciparum MAL4P3. 88 1e-27 2
(BB973905) Plasmodium berghei str. ANKA cDNA clone: OK003694... 74 2e-16 2
(CV222468) Le_mx0_60g03_SP6 Little Skate Multiple Tissues, N... 64 1e-12 2
(EE627846) SA_RG0_28g12_SP6 Dogfish Shark Rectal Gland, Norm... 58 2e-10 3
(CN583843) USDA-FP_126908 Acyrthosiphon pisum, Pea Aphid Acy... 46 2e-10 3
(EE886222) Sa_rcgd_07J24_M13R-29 Spiny dogfish shark rectal ... 58 2e-10 3
(DT610957) ACAG-aab07g01.g1 Hydra_EST_UCI-9 Hydra magnipapil... 56 2e-10 2
(EB688465) Sa_mx1_30e04_SP6 Dogfish Shark Multiple Tissues, ... 58 3e-10 3
(ES324359) SA_MX1_53a10_SP6 Dogfish Shark Multiple Tissues, ... 58 4e-10 3
(FF330356) 280443673 Pea aphid whole body normalized full le... 46 4e-10 3
(CN754554) ID0AAA13BD09RM1 ApMS Acyrthosiphon pisum cDNA clo... 46 5e-10 3
(CN586480) USDA-FP_129552 Acyrthosiphon pisum, Pea Aphid Acy... 46 6e-10 3
(DV204045) HSAA-aaa01c01.g1 UCI-11 Hydra vulgaris cDNA 5' si... 62 9e-10 2
(EA485709) Sequence 150 from patent US 7348410. 58 3e-09 2
(CS431229) Sequence 150 from Patent EP1710252. 58 3e-09 2
(BD281706) Flea head, nerve cord, hindgut and malpighian tub... 58 3e-09 2
(GM683384) Sequence 150 from Patent EP1947112. 58 3e-09 2
(EH642817) EST13925 LK04 Laupala kohalensis cDNA clone 10610... 48 2e-08 3
(EE571159) D08_D08fv2f16_pDNRf_530707 Myzus persicae, line F... 46 3e-08 3
(DB738940) Apis mellifera head cDNA, RIKEN full-length enric... 46 3e-08 3
(GH604561) G1297P552RA16.T0 C. parvum KSU-1 normalized sporo... 50 4e-07 3
(FC744344) CBBI14251.fwd CBBI Lottia gigantea 26h,37h,61h La... 54 8e-07 2
(FC751296) CBBI5663.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 54 8e-07 2
(FC710278) CAXY6255.fwd CAXY Lottia gigantea from male gonad... 54 9e-07 2
(EW442721) rnep16c_i1.y1 nep Sus scrofa cDNA 5', mRNA sequence. 58 2e-06 2
(DB793704) Sus scrofa mRNA, clone:DCI010038F07, 5' end, expr... 58 2e-06 2
(DT321688) SusFleck_BF_0025_0028_5_pCNS_M01 SusFleck Backfat... 58 4e-06 2
(EE298980) SA_RG0_20a01_SP6 Dogfish Shark Rectal Gland, Norm... 58 3e-05 2
(CJ395827) Molgula tectiformis cDNA, gonad clone:mtgd026i18,... 52 4e-05 2
(CJ419002) Molgula tectiformis cDNA, larva clone:mtlv032d05,... 52 5e-05 2
(CJ411330) Molgula tectiformis cDNA, larva clone:mtlv009g09,... 52 5e-05 2
(ES485887) BGBV-aac98e12.g1 Snail_EST_pSMART Biomphalaria gl... 60 8e-05 1
(AK230667) Sus scrofa mRNA, clone:AMP010022F12, expressed in... 58 3e-04 1
(EH292571) Q2_Reed_18d_tembryo_07_I08_121.F 14d_emb Meleagri... 58 3e-04 1
(EH292178) Q1_Reed_18d_tembryo_07_O03_047.F 14d_emb Meleagri... 58 3e-04 1
(EH291719) Q1_Reed_18d_tembryo_02_C03_035.F 14d_emb Meleagri... 58 3e-04 1
(EH287767) Q4_Reed_1DPH_cDNA_08_P16_256.F 1d_posthatch Melea... 58 3e-04 1
(EH286490) Q2_Reed_1DPH_cDNA_12_M18_285.F 1d_posthatch Melea... 58 3e-04 1
(AJ275272) Sus scrofa EST clone RIIIH1. 58 3e-04 1
(BW956675) Sus scrofa mRNA, clone:AMP010022F12, 5' end, expr... 58 3e-04 1
(FD643233) susfleck_AF_N_49_F11 SUSFLECK Abdominal Fat Norma... 58 3e-04 1
(FD639309) susfleck_AF_N_32_E10 SUSFLECK Abdominal Fat Norma... 58 3e-04 1
(EX818116) CBNA5926.fwd CBNA Phycomyces blakesleeanus NRRL15... 58 3e-04 1
(EW046882) rpigcb_7514.y1 cty Sus scrofa cDNA 5', mRNA seque... 58 3e-04 1
(ES487543) BGBV-aac78f08.b1 Snail_EST_pSMART Biomphalaria gl... 58 3e-04 1
(GO134545) CAGA26189.fwd CAGA Alvinella pompejana Normalized... 44 4e-04 2
(DN918244) MCF7RNAL24J05TF Human MCF7 breast cancer cell lin... 50 5e-04 2
(DN267824) LIB30320_015_F11_SP6_1 LIB30320 Canis lupus famil... 50 6e-04 2
(AC172772) Bos taurus clone CH240-267C23, WORKING DRAFT SEQU... 44 0.004 2
(AC221589) Bos taurus clone CH240-391N16, WORKING DRAFT SEQU... 44 0.004 2
(CW742312) MARC_886692 CHORI-240-142F2 Bos taurus genomic cl... 44 0.004 2
(CW740926) MARC_868623 CHORI-240-142F2 Bos taurus genomic cl... 44 0.004 2
(CW740923) MARC_868619 CHORI-240-142F2 Bos taurus genomic cl... 44 0.004 2
(CW742434) MARC_886912 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW742480) MARC_887009 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW740918) MARC_868609 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW742308) MARC_886678 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW742276) MARC_886620 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW742512) MARC_887070 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW741080) MARC_868985 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW742361) MARC_886781 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW740925) MARC_868622 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW742557) MARC_887150 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW742341) MARC_886734 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW742578) MARC_887190 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW742496) MARC_887041 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW740919) MARC_868610 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW740924) MARC_868620 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(CW742561) MARC_887162 CHORI-240-142F2 Bos taurus genomic cl... 44 0.005 2
(BJ043131) Xenopus laevis cDNA clone:XL033o18, 5' end, singl... 36 0.005 3
(BJ043085) Xenopus laevis cDNA clone:XL033m13, 5' end, singl... 36 0.005 3
(BJ037982) Xenopus laevis cDNA clone:XL042c05, 5' end, singl... 36 0.005 3
(CI761686) Oryza sativa Japonica Group cDNA, clone: J10B0029... 54 0.005 1
(BQ384688) NISC_mn08b04.y1 NICHD_XGC_Ov1 Xenopus laevis cDNA... 36 0.006 3
(BJ065359) Xenopus laevis cDNA clone:XL082l16, 5' end, singl... 36 0.006 3
(CF520730) AGENCOURT_15521086 NICHD_XGC_Kid1 Xenopus laevis ... 36 0.008 3
(BP696667) Xenopus laevis NBRP cDNA clone:XL480c05ex, 5' end. 36 0.009 3
(BP673956) Xenopus laevis NBRP cDNA clone:XL415f09ex, 5' end. 36 0.009 3
(BP694284) Xenopus laevis NBRP cDNA clone:XL474b10ex, 5' end. 36 0.009 3
(DR725605) AGENCOURT_54841343 NICHD_XGC_Emb10 Xenopus laevis... 36 0.009 3
(BU908304) AGENCOURT_10489671 NICHD_XGC_Emb1 Xenopus laevis ... 36 0.010 3
(EY189411) LLAE1039S Spider Loxosceles laeta cDNA library Lo... 52 0.020 1
(FG211403) Aafb00364 Antheraea assama fifth instar larval fa... 42 0.025 2
(DC120126) Xenopus laevis NBRP cDNA clone:xl289d24, 5' end. 34 0.028 3
(AM590205) Paracentrotus lividus EST, clone MPMGp1173J1652Q,... 48 0.031 2
(DC554904) Bombyx mori cDNA, clone:E_FL_wd--_08J20_F_0, 5' e... 48 0.031 2
(AM213861) Paracentrotus lividus EST, clone MPMGp1174B1629Q,... 48 0.033 2
(EY260259) BF01006X1H09.f1 Normalized subtracted keck librar... 38 0.035 2
(BW999507) Bombyx mori mRNA, clone:SES3786, expressed in fer... 48 0.037 2
(CZ291476) cp75h07.r Candida parapsilosis Random Genomic Lib... 44 0.039 2
(AM578472) Paracentrotus lividus EST, clone MPMGp1173P0223Q,... 48 0.040 2
(AM576314) Paracentrotus lividus EST, clone MPMGp1173B0918Q,... 48 0.042 2
(BC084165) Xenopus laevis RIO kinase 2 (yeast), mRNA (cDNA c... 36 0.058 3
(EZ012710) TSA: Acropora millepora SeqIndex14955, mRNA seque... 46 0.066 2
(AJ719586) Gallus gallus mRNA for hypothetical protein, clon... 50 0.080 1
(DT656898) pgr1n.UA001.227 Normalized chicken reproductive t... 50 0.080 1
(AJ454996) Gallus gallus EST, clone library riken1, clone 4e... 50 0.080 1
(AJ453299) Gallus gallus EST, clone library riken1, clone 33... 50 0.080 1
(BU271742) 603815962F1 CSEQCHN52 Gallus gallus cDNA clone Ch... 50 0.080 1
(EY215743) PRAG-aaa92e10.g1 Sand_fly_EST_Normalized Phleboto... 40 0.097 2
(AY387598) Flavobacterium columnare strain G4 prolyl oligope... 38 0.10 2
(BJ561188) Ipomoea nil cDNA clone:jm33a15, 5' end, single read. 38 0.11 2
(CJ746162) Ipomoea nil cDNA clone:jmsf33m11, 5' end. 38 0.12 2
(CJ748199) Ipomoea nil cDNA clone:jmsf39h01, 5' end. 38 0.12 2
(CF781762) AGENCOURT_15890810 XtSt10-30 Xenopus (Silurana) t... 36 0.17 2
(DV037739) BRS3230 storage root cDNA library Ipomoea batatas... 38 0.18 2
(FG344447) SF_09-d12 Bv_T1 Beta vulgaris subsp. vulgaris cDN... 34 0.24 2
(BQ582843) E012278-024-007-G17-SP6 MPIZ-ADIS-024-inflorescen... 34 0.24 2
(BC080511) Xenopus tropicalis cDNA clone IMAGE:7029600. 36 0.30 2
(AC120235) Rattus norvegicus clone CH230-83F19, *** SEQUENCI... 48 0.31 1
(AC106931) Rattus norvegicus clone CH230-71H11, WORKING DRAF... 48 0.31 1
(AC097803) Rattus norvegicus clone CH230-23D22, *** SEQUENCI... 48 0.31 1
(AM552624) Paracentrotus lividus EST, clone MPMGp1172D14108Q... 48 0.31 1
(AM550572) Paracentrotus lividus EST, clone MPMGp1172M04102Q... 48 0.31 1
(CI759531) Oryza sativa Japonica Group cDNA, clone: J10B0021... 48 0.31 1
(BJ648833) Eptatretus burgeri leukocyte cDNA clone:hg115c14,... 34 0.90 2
(AC139354) Medicago truncatula clone mth1-64n13, complete se... 46 0.95 2
(BU276121) Cr_Emb_06G11_TEXF1 Convoluta roscoffensis embryos... 38 1.1 2
(AJ684872) Sus scrofa EST, clone C0001807_E02. 38 1.2 2
(CU915355) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.2 1
(CU467050) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.2 1
(AC223153) Bos taurus clone CH240-427I4, WORKING DRAFT SEQUE... 46 1.2 1
(AQ842246) T136187b shotgun sub-library of BAC clone 64N13 M... 46 1.2 1
(FH296736) CHO_OF4225xg05f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 1.2 1
(CK310447) SB02006A1D01.f1 normalized Keck-Tagu Library SB02... 46 1.2 1
(CK307604) SB02044A1F11.f1 normalized Keck-Tagu Library SB02... 46 1.2 1
(FF597841) Le_emcl1_03J18_M13Reverse Little Skate (Leucoraja... 46 1.2 1
(FE713046) SB03053A2B11.f1 Normalized subtracted Keck-Tagu L... 46 1.2 1
(EX930515) li42h08.g7 Ginkgo female leaf (NYBG) Ginkgo bilob... 46 1.2 1
(BU276037) Cr_Emb_04A04_TEXF1 Convoluta roscoffensis embryos... 38 1.4 2
(BY673914) Mus musculus 14.5 days embryo df/df Rathke's pouc... 30 1.5 3
(CR547934) Pongo abelii mRNA; EST DKFZp459O2126_r1 (from clo... 40 1.7 2
(AQ935090) CpG2332A CpIOWAgDNA1 Cryptosporidium parvum genom... 40 1.9 2
(EJ884317) 1093018411050 Global-Ocean-Sampling_GS-30-02-01-1... 38 1.9 2
(EJ781312) 1093017255588 Global-Ocean-Sampling_GS-30-02-01-1... 38 2.0 2
(AM617808) Entamoeba invadens IP1 GSS, clone inv103d05.q1k. 42 2.0 2
(BB836822) Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDN... 30 2.1 3
(BB834798) Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDN... 30 2.2 3
(EJ306289) 1095390090758 Global-Ocean-Sampling_GS-27-01-01-1... 34 2.2 2
(BY388625) Mus musculus blastocyst blastocyst cDNA, RIKEN fu... 30 2.2 3
(CR376796) Zebrafish DNA sequence from clone CH211-278J12 in... 32 2.5 2
(CU459148) Zebrafish DNA sequence from clone CH1073-183I1 in... 32 2.7 2
(AP003046) Oryza sativa Japonica Group genomic DNA, chromoso... 34 2.7 5
(AC024444) Homo sapiens clone RP11-239F20, WORKING DRAFT SEQ... 44 2.8 3
(BB710717) Mus musculus 2 cells egg cDNA, RIKEN full-length ... 28 3.8 3
(BF523686) UI-R-Y0-abu-f-12-0-UI.r1 UI-R-Y0 Rattus norvegicu... 28 4.1 3
(AA692933) vr56e09.s1 Knowles Solter mouse 2 cell Mus muscul... 28 4.1 3
(BQ512420) EST619835 Generation of a set of potato cDNA clon... 40 4.7 2
(BV040520) S212P60447FF11.T0 CZECHII/Ei Mus musculus STS gen... 44 4.9 1
(AC164555) Mus musculus BAC clone RP23-346G13 from chromosom... 44 4.9 1
(AC154326) Mus musculus chromosome 16 clone RP24-496J3, comp... 44 4.9 1
(AC154260) Mus musculus BAC clone RP24-225C5 from 17, comple... 44 4.9 1
(CP000501) Pichia stipitis CBS 6054 chromosome 7, complete s... 44 4.9 1
(EA138827) Sequence 3142 from patent US 7214786. 44 4.9 1
(EF493964) Tegosa orobia orobia voucher NW128-10 cytochrome ... 44 4.9 1
(DQ518739) Acanthanura sp. RCG-2005 haplotype H60 cytochrome... 44 4.9 1
(DQ518733) Acanthanura sp. RCG-2005 haplotype H54 cytochrome... 44 4.9 1
(DQ518719) Acanthanura sp. RCG-2005 haplotype H40 cytochrome... 44 4.9 1
(DQ518715) Acanthanura sp. RCG-2005 haplotype H36 cytochrome... 44 4.9 1
(DQ518714) Acanthanura sp. RCG-2005 haplotype H35 cytochrome... 44 4.9 1
(AL513165) Human DNA sequence from clone RP11-613M10 on chro... 44 4.9 1
(AC090041) Homo sapiens 12 BAC RP11-239F20 (Roswell Park Can... 44 4.9 1
(AC084198) Homo sapiens 3 BAC RP11-454H13 (Roswell Park Canc... 44 4.9 1
(AC153720) Bos taurus clone CH240-23F3, WORKING DRAFT SEQUEN... 44 4.9 1
(AC130435) Homo sapiens chromosome 3 clone RP11-373A23, *** ... 44 4.9 1
(AL139414) Human DNA sequence *** SEQUENCING CANCELLED *** f... 44 4.9 1
(AC169335) Bos taurus clone CH240-230G18, WORKING DRAFT SEQU... 44 4.9 1
(AC165040) Bos taurus clone CH240-156I8, *** SEQUENCING IN P... 44 4.9 1
(AC009761) Homo sapiens chromosome 3 clone RP11-373A23 map 3... 44 4.9 1
(EJ590256) 1092961045585 Global-Ocean-Sampling_GS-29-01-01-1... 44 4.9 1
(EJ523907) 1092955168143 Global-Ocean-Sampling_GS-29-01-01-1... 44 4.9 1
(AL446295) Paramecium tetraurelia sequence M04D05r of the en... 44 4.9 1
(CG920194) MBECP93TR mth2 Medicago truncatula genomic clone ... 44 4.9 1
(AJ731428) Gallus gallus EST, clone 4e4s3. 44 4.9 1
(BW476506) Ciona intestinalis cDNA, clone:cima004h17, 5'end,... 44 4.9 1
(BW338942) Ciona intestinalis cDNA, clone:ciem810l06, 5'end,... 44 4.9 1
(BW289587) Ciona intestinalis cDNA, clone:cigd039l14, 5' end... 44 4.9 1
(BW286692) Ciona intestinalis cDNA, clone:cigd030n10, 5' end... 44 4.9 1
(BW286123) Ciona intestinalis cDNA, clone:cigd002a13, 5' end... 44 4.9 1
(BW279155) Ciona intestinalis cDNA, clone:cigd010a15, 5' end... 44 4.9 1
(BW234660) Ciona intestinalis cDNA, clone:citb048f08, 5' end... 44 4.9 1
(BW215884) Ciona intestinalis cDNA, clone:cieg081d22, 5' end... 44 4.9 1
(BW211174) Ciona intestinalis cDNA, clone:cieg066h10, 5' end... 44 4.9 1
(BW208741) Ciona intestinalis cDNA, clone:cieg101p03, 5' end... 44 4.9 1
(BW050553) Ciona intestinalis cDNA, clone:cibd006l18, 5' end... 44 4.9 1
(BW035097) Ciona intestinalis cDNA, clone:cibd027m18, 5' end... 44 4.9 1
(BU100136) WHE3315_F02_L03ZS Chinese Spring wheat drought st... 44 4.9 1
(BP005662) Ciona intestinalis cDNA, clone:ciad38i05, 5' end,... 44 4.9 1
(BM959958) cihA1L9S Ascidian hemocytes cDNA library Ciona in... 44 4.9 1
(BM230365) K0294C12-3 NIA Mouse Unfertilized Egg cDNA Librar... 44 4.9 1
(BI508274) BB170023B10C06.5 Bee Brain Normalized/Subtracted ... 44 4.9 1
(FK182950) XABT200294.b1 Gateway compatible cien cDNA librar... 44 4.9 1
(FK164285) XABT188902.b1 Gateway compatible cien cDNA librar... 44 4.9 1
(FK143213) XABT175847.b1 Gateway compatible cien cDNA librar... 44 4.9 1
(FK099232) XABT147951.b1 Gateway compatible cien cDNA librar... 44 4.9 1
(FF959792) CBWU86552.b1 Yutaka Satou unpublished cDNA librar... 44 4.9 1
(FF957366) CBWU85044.b1 Yutaka Satou unpublished cDNA librar... 44 4.9 1
(FF933609) CBWU69956.b1 Yutaka Satou unpublished cDNA librar... 44 4.9 1
(FF873394) CBWU16571.b1 Yutaka Satou unpublished cDNA librar... 44 4.9 1
(FF848245) TC043_F03 Moniezia expansa Shihezi immature progl... 44 4.9 1
(FF809178) XABT99195.fwd Gateway compatible cien cDNA librar... 44 4.9 1
(FF806596) XABT97489.fwd Gateway compatible cien cDNA librar... 44 4.9 1
(FF805523) XABT96394.fwd Gateway compatible cien cDNA librar... 44 4.9 1
(FF805009) XABT96048.fwd Gateway compatible cien cDNA librar... 44 4.9 1
(FF781009) XABT80227.fwd Gateway compatible cien cDNA librar... 44 4.9 1
(FF748309) XABT57650.fwd Gateway compatible cien cDNA librar... 44 4.9 1
(FF724376) XABT40298.fwd Gateway compatible cien cDNA librar... 44 4.9 1
(FF704921) XABT112776.fwd Gateway compatible cien cDNA libra... 44 4.9 1
(FE467558) CAOS25205.fwd CAOS Selaginella moellendorffii mix... 44 4.9 1
(FE462280) CAOS22117.fwd CAOS Selaginella moellendorffii mix... 44 4.9 1
(AV988938) Ciona intestinalis cDNA, clone:citb33n07, 5' end,... 44 4.9 1
(AV981999) Ciona intestinalis cDNA, clone:cilv36m24, 5' end,... 44 4.9 1
(AV976609) Ciona intestinalis cDNA, clone:cieg42j04, 5' end,... 44 4.9 1
(CP000387) Streptococcus sanguinis SK36, complete genome. 44 4.9 1
(CF441659) EST678004 normalized cDNA library of onion Allium... 38 5.0 2
(BM109305) EST556841 potato roots Solanum tuberosum cDNA clo... 40 5.1 2
(EI316416) GM_WBc0049N11.r GM_WBc Glycine max genomic clone ... 40 5.2 2
(BP496502) Rattus norvegicus mRNA, clone:RI14565, 3' end, ex... 28 5.3 3
(AL361309) Mus musculus mRNA; expressed sequence tag; clone ... 28 5.9 3
(AA474800) ve62c05.r1 Beddington mouse embryonic region Mus ... 28 6.0 3
(AM216688) Paracentrotus lividus EST, clone MPMGp1174J0435Q,... 40 6.1 2
(BP496785) Rattus norvegicus mRNA, clone:RI14840, 3' end, ex... 28 6.2 3
(DB706656) Solanum lycopersicum cDNA, clone: LEFL1092AH01, 5... 40 6.5 2
(AG182810) Pan troglodytes DNA, clone: RP43-056B16.TJ. 40 6.5 2
(FI250739) CccaBb021-K2JR CccABb Cajanus cajan genomic clone... 40 6.7 2
(FE346698) CBIB6771.fwd CBIB_Daphnia_pulex_Chosen_One_Librar... 40 6.7 2
(AL390788) Human DNA sequence from clone RP11-384P5 on chrom... 36 6.8 3
(CF446907) EST683252 normalized cDNA library of onion Allium... 38 7.0 2
(AA800999) EST190496 Normalized rat muscle, Bento Soares Rat... 28 7.1 3
(CG942206) MBECX26TR mth2 Medicago truncatula genomic clone ... 38 7.1 2
(CF440731) EST677076 normalized cDNA library of onion Allium... 38 7.1 2
(BY387701) Mus musculus blastocyst blastocyst cDNA, RIKEN fu... 28 7.2 3
(CO363630) RTK1_10_H03.g1_A029 Roots minus potassium Pinus t... 40 7.2 2
(EK031295) 1092955410199 Global-Ocean-Sampling_GS-31-01-01-1... 34 7.3 2
(BB727498) Mus musculus 8 cells embryo 8 cells cDNA, RIKEN f... 28 7.3 3
(AA216794) mu86c01.r1 Soares mouse lymph node NbMLN Mus musc... 28 7.4 3
(BB727460) Mus musculus 8 cells embryo 8 cells cDNA, RIKEN f... 28 7.5 3
(BM199418) C0459A06-3 NIA Mouse ES Cell (LIF-) cDNA Library ... 28 7.5 3
(BM242808) K0637G10-3 NIA Mouse Hematopoietic Stem Cell (Lin... 28 7.5 3
(BM216503) C0881D12-3 NIA Mouse Blastocyst cDNA Library (Lon... 28 7.5 3
(BM199354) C0457H03-3 NIA Mouse ES Cell (LIF-) cDNA Library ... 28 7.5 3
(BM195517) C0311G02-3 NIA Mouse Undifferentiated ES Cell cDN... 28 7.5 3
(CJ321885) Mus musculus 14.5 days embryo Rathke's pouches cD... 28 7.6 3
(BY376919) Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDN... 28 7.6 3
(DR944097) EST1135636 Aquilegia cDNA library Aquilegia formo... 34 7.7 2
(AW912514) uf52d07.x1 Soares_mammary_gland_NMLMG Mus musculu... 28 7.7 3
(EJ580950) 1092960165742 Global-Ocean-Sampling_GS-29-01-01-1... 36 7.8 2
(EJ578569) 1092960131287 Global-Ocean-Sampling_GS-29-01-01-1... 36 7.9 2
(FI251581) CccaBb021-J12JR CccABb Cajanus cajan genomic clon... 40 8.0 2
(CX205451) MNS09011 Mouse Neurosphere Normalized cDNA librar... 28 8.1 3
(AI875313) uk30f06.y1 Sugano mouse kidney mkia Mus musculus ... 28 8.1 3
(BY387979) Mus musculus blastocyst blastocyst cDNA, RIKEN fu... 28 8.1 3
(CJ300124) Mus musculus 14.5 days embryo Rathke's pouches cD... 28 8.2 3
(AW552378) L0213B02-3 NIA Mouse Newborn Ovary cDNA Library M... 28 8.3 3
(EJ660025) 1092955020388 Global-Ocean-Sampling_GS-30-02-01-1... 36 8.3 2
(CJ300520) Mus musculus 14.5 days embryo Rathke's pouches cD... 28 8.3 3
(BF389214) UI-R-BS2-bdi-b-06-0-UI.s1 UI-R-BS2 Rattus norvegi... 28 8.3 3
(AM286280) Francisella tularensis subsp. tularensis strain F... 32 8.4 10
(AJ749949) Francisella tularensis subsp. tularensis SCHU S4 ... 32 8.4 10
(EJ683371) 1092955152429 Global-Ocean-Sampling_GS-30-02-01-1... 36 8.5 2
(AU017014) Mus musculus 2-cell embryo cDNA 3'-end sequence, ... 28 8.6 3
(CJ312432) Mus musculus 14.5 days embryo Rathke's pouches cD... 28 8.6 3
(BM068935) id70h02.x1 Melton Normalized Mixed Mouse Pancreas... 28 8.6 3
(AC148443) Rhinolophus ferrumequinum clone VMRC7-325O15, WOR... 38 8.7 4
(AC177074) Strongylocentrotus purpuratus clone R3-4004K19, W... 32 8.8 2
(AW111654) MT4877 mouse liver, dioxin treated Mus musculus c... 28 8.8 3
(CJ299300) Mus musculus 14.5 days embryo Rathke's pouches cD... 28 8.8 3
(BP472178) Rattus norvegicus mRNA, clone:RBC08294, 3' end, e... 28 8.8 3
(AC091951) Homo sapiens chromosome 5 clone RP11-404K5, compl... 42 8.8 3
(BY470323) Mus musculus melanocyte cDNA, RIKEN full-length e... 28 8.9 3
(BE553967) ur45b01.x1 NCI_CGAP_Mam2 Mus musculus cDNA clone ... 28 8.9 3
(AW549487) L0051D06-3 NIA Mouse E12.5 Female Mesonephros and... 28 8.9 3
(AW209078) un99e12.x1 NCI_CGAP_Mam6 Mus musculus cDNA clone ... 28 8.9 3
(AW987935) uf96e02.y1 Soares_mammary_gland_NMLMG Mus musculu... 28 9.0 3
(AC168620) Strongylocentrotus purpuratus clone R3-3046F10, W... 32 9.0 2
(AI849863) UI-M-AL1-aho-f-12-0-UI.s1 NIH_BMAP_MCO_N Mus musc... 28 9.0 3
(BE226008) ia23h10.x1 Mouse E10 5 12 5 Pancreas cDNA Library... 28 9.0 3
(BP496136) Rattus norvegicus mRNA, clone:RI14163, 3' end, ex... 28 9.4 3
(BG060514) L0904A11-3 NIA Mouse Newborn Kidney cDNA Library ... 28 9.5 3
(BB759602) Mus musculus melanocyte cDNA, RIKEN full-length e... 28 9.5 3
(AM438262) Vitis vinifera, whole genome shotgun sequence, co... 30 9.6 2
(BY471746) Mus musculus melanocyte cDNA, RIKEN full-length e... 28 9.8 3
(AA517288) vh86e06.r1 Knowles Solter mouse embryonic stem ce... 28 9.8 3
(AU045238) Mus musculus 16-cell embryo cDNA 3'-end sequence,... 28 9.8 3
(AP010248) Lotus japonicus genomic DNA, chromosome 1, clone:... 40 9.9 3
(BY470414) Mus musculus melanocyte cDNA, RIKEN full-length e... 28 10.0 3
(BB756858) Mus musculus melanocyte cDNA, RIKEN full-length e... 28 10.0 3
>(BJ411198) Dictyostelium discoideum cDNA clone:ddv3l07, 5' end,
single read.
Length = 491
Score = 914 bits (461), Expect = 0.0
Identities = 461/461 (100%)
Strand = Plus / Plus
Query: 30 tagatccaaaagcattaagatacttaagtaaagatgattttagaacattagttgcagttg 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 tagatccaaaagcattaagatacttaagtaaagatgattttagaacattagttgcagttg 89
Query: 90 aaatgggtatgaaaaatcatgaactcgtaccagtcagtctcatttgcacaattgcaaatt 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 aaatgggtatgaaaaatcatgaactcgtaccagtcagtctcatttgcacaattgcaaatt 149
Query: 150 taaaatatggtggtactaaaaaatcaattcaaacattacataaatttaaattacttttcc 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 taaaatatggtggtactaaaaaatcaattcaaacattacataaatttaaattacttttcc 209
Query: 210 atgatggcagaaattatgatggttataaattaacatatttaggatatgattttttagcat 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 atgatggcagaaattatgatggttataaattaacatatttaggatatgattttttagcat 269
Query: 270 taaaaacattggtatcaagaggagtatgttcatatgttggtaatcaaattggtgttggta 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 taaaaacattggtatcaagaggagtatgttcatatgttggtaatcaaattggtgttggta 329
Query: 330 aagaatcggatatttatatagttgccaatgacgataatcaagagatggtattaaaattac 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aagaatcggatatttatatagttgccaatgacgataatcaagagatggtattaaaattac 389
Query: 390 atagattgggtagagtttcattcaagacaattaagaacaatcgtgactatttgaagcaca 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 atagattgggtagagtttcattcaagacaattaagaacaatcgtgactatttgaagcaca 449
Query: 450 gaaaatcagcatcatggctatacttgtcaagattggcggca 490
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gaaaatcagcatcatggctatacttgtcaagattggcggca 490
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 613,791,704
Number of extensions: 37431351
Number of successful extensions: 2945116
Number of sequences better than 10.0: 290
Length of query: 490
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 467
Effective length of database: 99,442,330,388
Effective search space: 46439568291196
Effective search space used: 46439568291196
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
|
| Homology vs Protein |
Query= Contig-U02054-1 (Contig-U02054-1Q) /CSM_Contig/Contig-U02054-1Q.Seq.d
(490 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54T05) RecName: Full=Serine/threonine-protein kinase rio2; ... 312 3e-84
AK073376_1(AK073376|pid:none) Oryza sativa Japonica Group cDNA c... 209 2e-53
BT038255_1(BT038255|pid:none) Zea mays full-length cDNA clone ZM... 209 2e-53
EU952236_1(EU952236|pid:none) Zea mays clone 1235111 serine/thre... 209 3e-53
CR753867_2(CR753867|pid:none) Zebrafish DNA sequence from clone ... 196 3e-49
AY398407_1(AY398407|pid:none) Danio rerio clone RK123A3C08 RIO k... 196 3e-49
BC067141_1(BC067141|pid:none) Danio rerio RIO kinase 2 (yeast), ... 196 3e-49
AJ719586_1(AJ719586|pid:none) Gallus gallus mRNA for hypothetica... 195 5e-49
BC161483_1(BC161483|pid:none) Xenopus tropicalis RIO kinase 2, m... 194 1e-48
BC084165_1(BC084165|pid:none) Xenopus laevis RIO kinase 2 (yeast... 194 1e-48
CR760205_1(CR760205|pid:none) Xenopus tropicalis finished cDNA, ... 194 1e-48
CR954206_179(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 192 5e-48
AK002021_1(AK002021|pid:none) Homo sapiens cDNA FLJ11159 fis, cl... 191 8e-48
BC112494_1(BC112494|pid:none) Bos taurus RIO kinase 2 (yeast), m... 191 8e-48
AX405785_1(AX405785|pid:none) Sequence 200 from Patent WO0222660. 191 8e-48
AK090011_1(AK090011|pid:none) Mus musculus RCB-0464 Meth-A cDNA,... 191 8e-48
(Q9BVS4) RecName: Full=Serine/threonine-protein kinase RIO2; ... 191 8e-48
AY335641_1(AY335641|pid:none) Synthetic construct Homo sapiens h... 189 4e-47
BT058938_1(BT058938|pid:none) Salmo salar clone ssal-rgf-515-013... 187 1e-46
AL132980_31(AL132980|pid:none) Arabidopsis thaliana DNA chromoso... 181 6e-45
BT083465_1(BT083465|pid:none) Drosophila melanogaster MIP10156 f... 178 5e-44
AE014297_3901(AE014297|pid:none) Drosophila melanogaster chromos... 178 5e-44
(Q9P7W5) RecName: Full=Serine/threonine-protein kinase rio2; ... 174 8e-43
AM270401_43(AM270401|pid:none) Aspergillus niger contig An18c008... 169 3e-41
CP000501_160(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 167 9e-41
FN392322_188(FN392322|pid:none) Pichia pastoris GS115 chromosome... 166 2e-40
FM992695_716(FM992695|pid:none) Candida dubliniensis CD36 chromo... 163 2e-39
CR382124_776(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 162 5e-39
CR382133_463(CR382133|pid:none) Debaryomyces hansenii strain CBS... 161 7e-39
AM920436_682(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 161 9e-39
AE017343_194(AE017343|pid:none) Cryptococcus neoformans var. neo... 159 4e-38
AJ617308_2(AJ617308|pid:none) Kluyveromyces marxianus rtt106 gen... 159 4e-38
AC084047_22(AC084047|pid:none) Trypanosoma brucei chromosome 6 c... 158 6e-38
CU928166_320(CU928166|pid:none) Kluyveromyces thermotolerans str... 158 7e-38
CR380954_347(CR380954|pid:none) Candida glabrata strain CBS138 c... 156 3e-37
AM494967_148(AM494967|pid:none) Leishmania braziliensis chromoso... 155 6e-37
AM502248_173(AM502248|pid:none) Leishmania infantum chromosome 30. 154 1e-36
(P40160) RecName: Full=Serine/threonine-protein kinase RIO2; ... 151 9e-36
CU638744_313(CU638744|pid:none) Podospora anserina genomic DNA c... 150 2e-35
FN357394_68(FN357394|pid:none) Schistosoma mansoni genome sequen... 119 3e-26
CP000816_1385(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, c... 110 2e-23
CP000493_68(CP000493|pid:none) Hyperthermus butylicus DSM 5456, ... 106 3e-22
CP000505_731(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 106 3e-22
CP000477_536(CP000477|pid:none) Methanosaeta thermophila PT, com... 105 7e-22
AE008384_3081(AE008384|pid:none) Methanosarcina mazei strain Goe... 105 7e-22
CP000867_934(CP000867|pid:none) Methanococcus maripaludis C6, co... 104 1e-21
E72539(E72539)hypothetical protein APE1602 - Aeropyrum pernix (s... 104 1e-21
CP000743_1146(CP000743|pid:none) Methanococcus aeolicus Nankai-3... 103 3e-21
CP000742_1200(CP000742|pid:none) Methanococcus vannielii SB, com... 102 4e-21
CP000745_995(CP000745|pid:none) Methanococcus maripaludis C7, co... 102 4e-21
CP000099_2747(CP000099|pid:none) Methanosarcina barkeri str. Fus... 102 5e-21
AE009439_1000(AE009439|pid:none) Methanopyrus kandleri AV19, com... 102 6e-21
AY714853_23(AY714853|pid:none) Uncultured archaeon GZfos31B6 clo... 95 1e-18
CP001140_22(CP001140|pid:none) Desulfurococcus kamchatkensis 122... 92 7e-18
AL590451_125(AL590451|pid:none) chromosome IX of strain GB-M1 of... 90 3e-17
AY596297_1807(AY596297|pid:none) Haloarcula marismortui ATCC 430... 86 6e-16
CP001365_529(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 86 6e-16
AE009950_364(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co... 85 8e-16
AJ248287_302(AJ248287|pid:none) Pyrococcus abyssi complete genom... 83 3e-15
AE004437_150(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 81 2e-14
CP001338_1136(CP001338|pid:none) Candidatus Methanosphaerula pal... 80 2e-14
CP000562_480(CP000562|pid:none) Methanoculleus marisnigri JR1, c... 80 2e-14
CP000855_1395(CP000855|pid:none) Thermococcus onnurineus NA1, co... 80 3e-14
CP000575_1273(CP000575|pid:none) Staphylothermus marinus F1, com... 80 3e-14
CP000254_2519(CP000254|pid:none) Methanospirillum hungatei JF-1,... 79 4e-14
CR936257_124(CR936257|pid:none) Natronomonas pharaonis DSM 2160 ... 79 7e-14
AM180088_431(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 78 1e-13
CP001014_1934(CP001014|pid:none) Thermoproteus neutrophilus V24S... 77 2e-13
CP000504_683(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,... 76 5e-13
BA000023_251(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA, ... 70 3e-11
AY814262_1(AY814262|pid:none) Schistosoma japonicum SJCHGC04135 ... 58 1e-07
EU441553_1(EU441553|pid:none) Xenopus borealis clone RioK2.a RIO... 56 5e-07
CP001402_1912(CP001402|pid:none) Sulfolobus islandicus M.16.4, c... 55 7e-07
CP001400_1789(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 55 7e-07
AE006641_176(AE006641|pid:none) Sulfolobus solfataricus P2, comp... 55 9e-07
CP001404_782(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51,... 54 2e-06
AE017199_452(AE017199|pid:none) Nanoarchaeum equitans Kin4-M, co... 48 1e-04
AE009439_674(AE009439|pid:none) Methanopyrus kandleri AV19, comp... 40 0.038
AK103061_1(AK103061|pid:none) Oryza sativa Japonica Group cDNA c... 37 0.25
AM494966_25(AM494966|pid:none) Leishmania braziliensis chromosom... 36 0.43
BT038292_1(BT038292|pid:none) Zea mays full-length cDNA clone ZM... 36 0.43
AM502247_40(AM502247|pid:none) Leishmania infantum chromosome 29. 36 0.43
CP000821_3239(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 35 0.93
BT069603_1(BT069603|pid:none) Zea mays full-length cDNA clone ZM... 35 0.95
AY088156_1(AY088156|pid:none) Arabidopsis thaliana clone 42141 m... 35 1.2
CU928178_421(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 35 1.2
AK176351_1(AK176351|pid:none) Arabidopsis thaliana mRNA, complet... 35 1.2
AC006585_8(AC006585|pid:none) Arabidopsis thaliana chromosome 2 ... 35 1.2
AY062719_1(AY062719|pid:none) Arabidopsis thaliana SUDD-like pro... 35 1.2
AB120324_1(AB120324|pid:none) Nicotiana tabacum NtRIO mRNA for R... 35 1.2
CP000562_2485(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 34 1.6
CP000254_2383(CP000254|pid:none) Methanospirillum hungatei JF-1,... 34 1.6
CP001338_2651(CP001338|pid:none) Candidatus Methanosphaerula pal... 34 1.6
FN357334_5(FN357334|pid:none) Schistosoma mansoni genome sequenc... 34 1.6
AY810901_1(AY810901|pid:none) Schistosoma japonicum SJCHGC04428 ... 34 2.1
BX571862_97(BX571862|pid:none) Photorhabdus luminescens subsp. l... 33 3.6
CP000931_2999(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 32 6.0
CP001179_122(CP001179|pid:none) Bacillus cereus AH187 plasmid pA... 32 6.1
CP001166_88(CP001166|pid:none) Bacillus cereus H3081.97 plasmid ... 32 6.1
CP000270_2031(CP000270|pid:none) Burkholderia xenovorans LB400 c... 32 8.0
AF065404_84(AF065404|pid:none) Bacillus anthracis virulence plas... 32 8.0
CP000780_2446(CP000780|pid:none) Candidatus Methanoregula boonei... 32 8.0
>(Q54T05) RecName: Full=Serine/threonine-protein kinase rio2;
EC=2.7.11.1;
Length = 522
Score = 312 bits (799), Expect = 3e-84
Identities = 154/154 (100%), Positives = 154/154 (100%)
Frame = +2
Query: 29 LDPKALRYLSKDDFRTLVAVEMGMKNHELVPVSLICTIANLKYGGTKKSIQTLHKFKLLF 208
LDPKALRYLSKDDFRTLVAVEMGMKNHELVPVSLICTIANLKYGGTKKSIQTLHKFKLLF
Sbjct: 3 LDPKALRYLSKDDFRTLVAVEMGMKNHELVPVSLICTIANLKYGGTKKSIQTLHKFKLLF 62
Query: 209 HDGRNYDGYKLTYLGYDFLALKTLVSRGVCSYVGNQIGVGKESDIYIVANDDNQEMVLKL 388
HDGRNYDGYKLTYLGYDFLALKTLVSRGVCSYVGNQIGVGKESDIYIVANDDNQEMVLKL
Sbjct: 63 HDGRNYDGYKLTYLGYDFLALKTLVSRGVCSYVGNQIGVGKESDIYIVANDDNQEMVLKL 122
Query: 389 HRLGRVSFKTIKNNRDYLKHRKSASWLYLSRLAA 490
HRLGRVSFKTIKNNRDYLKHRKSASWLYLSRLAA
Sbjct: 123 HRLGRVSFKTIKNNRDYLKHRKSASWLYLSRLAA 156
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 739,560,703
Number of extensions: 14527445
Number of successful extensions: 43145
Number of sequences better than 10.0: 102
Number of HSP's gapped: 43037
Number of HSP's successfully gapped: 102
Length of query: 163
Length of database: 1,051,180,864
Length adjustment: 118
Effective length of query: 45
Effective length of database: 669,266,902
Effective search space: 30117010590
Effective search space used: 30117010590
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
|