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Dicty_cDB
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U15301-1
Contig ID Contig-U15301-1
Contig update 2004. 6.11
Contig sequence 
>Contig-U15301-1 (Contig-U15301-1Q) /CSM_Contig/Contig-U15301-1Q.Seq.d
TCAACAGGTACATCAGGTGGTCATCCAGATCCATGTANAGATGTTGACTG
TCCAGATGGTTTCCATTGTGAATGTAAAGATGGTAAAACTGCTAAATGTG
TTCCAAGTCCAACAACCGGTTCATCAAGTACATCAGGTGGTCATCCAGAT
CCATGTAAAGATGTAACTTGTCCAGATGGTTTCCATTGTGAATGTAAAGA
TGGTAAANCTGCTAAATGTGTTCCAAGTCCAACAACCGGTTCATCAAGTA
CATCAGGTGGTAACACTAACCCATGTTCAAATGTAAATTGTCCAGATGGT
TTCTATTGTGAATGTTGCGTTGTTGCCCATAGACCACCACCAAAATGCTC
TTTAAGATGTCCACCAAGACATGAATGTAGAGTCAACCACTTTGGTGAAG
AATGTTGTGTTAAAGTTCACCACGATAAATGTTCATTGAGATGTCCACCA
GGCCATGAATGTAAAGTTGATCAACATGGAAAAGAATGTTGCGTTGTTGC
CCATAGACCACCACCAAAATGCTCATTAAGATGTCCACCAAAACATGAAT
GTAGAATCAATCACTTTGGTGAAGAATGCTGTGTTAAAAGTAGAAATGAT
TGTTTAACTTGTGAAGACCTAAACTGTGAAAGAAAAGGTTTACATTGTGC
CATGAAAACTGTACCAATTGATAAAGAAAATTGTTGTGAAAAAGT
Gap no gap
Contig length 695
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 7923742
End point 7924436
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U15301
List of clone(s) 

est1=AHN123Z,1,695
Translated Amino Acid sequence 
STGTSGGHPDPCXDVDCPDGFHCECKDGKTAKCVPSPTTGSSSTSGGHPDPCKDVTCPDG
FHCECKDGKXAKCVPSPTTGSSSTSGGNTNPCSNVNCPDGFYCECCVVAHRPPPKCSLRC
PPRHECRVNHFGEECCVKVHHDKCSLRCPPGHECKVDQHGKECCVVAHRPPPKCSLRCPP
KHECRINHFGEECCVKSRNDCLTCEDLNCERKGLHCAMKTVPIDKENCCEK
Translated Amino Acid sequence (All Frames) 
Frame A:
STGTSGGHPDPCXDVDCPDGFHCECKDGKTAKCVPSPTTGSSSTSGGHPDPCKDVTCPDG
FHCECKDGKXAKCVPSPTTGSSSTSGGNTNPCSNVNCPDGFYCECCVVAHRPPPKCSLRC
PPRHECRVNHFGEECCVKVHHDKCSLRCPPGHECKVDQHGKECCVVAHRPPPKCSLRCPP
KHECRINHFGEECCVKSRNDCLTCEDLNCERKGLHCAMKTVPIDKENCCEK


Frame B:
qqvhqvviqihvxmltvqmvsivnvkmvkllnvfqvqqpvhqvhqvviqihvkm*lvqmv
sivnvkmvxllnvfqvqqpvhqvhqvvtlthvqm*ivqmvsivnvallpidhhqnal*dv
hqdmnvesttlvknvvlkfttinvh*dvhqamnvklinmeknvallpidhhqnah*dvhq
nmnvesitlvknavlkvemiv*lvkt*tvkekvyivp*klyqlikkivvkk


Frame C:
nryirwssrsmxrc*lsrwfpl*m*rw*nc*mcsksnnrfikyirwssrsm*rcnlsrwf
pl*m*rw*xc*mcsksnnrfikyirw*h*pmfkcklsrwfll*mlrccp*tttkmlfkms
tkt*m*sqplw*rmlc*sspr*mfiemstrp*m*s*stwkrmlrccp*tttkmlikmstk
t*m*nqslw*rmlc*k*k*lfnl*rpkl*kkrftlchenctn**rkll*ks
own update 2004. 6.23
Homology vs CSM-cDNA 
Query= Contig-U15301-1 (Contig-U15301-1Q)
/CSM_Contig/Contig-U15301-1Q.Seq.d
         (695 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15301-1 (Contig-U15301-1Q) /CSM_Contig/Conti...  1366  0.0
Contig-U16419-1 (Contig-U16419-1Q) /CSM_Contig/Conti...   710  0.0
Contig-U13200-1 (Contig-U13200-1Q) /CSM_Contig/Conti...   660  0.0
Contig-U14678-1 (Contig-U14678-1Q) /CSM_Contig/Conti...   432  e-121
Contig-U16381-1 (Contig-U16381-1Q) /CSM_Contig/Conti...    66  8e-11
Contig-U15752-1 (Contig-U15752-1Q) /CSM_Contig/Conti...    66  8e-11
Contig-U15399-1 (Contig-U15399-1Q) /CSM_Contig/Conti...    66  8e-11
Contig-U12890-1 (Contig-U12890-1Q) /CSM_Contig/Conti...    66  8e-11
Contig-U10797-1 (Contig-U10797-1Q) /CSM_Contig/Conti...    36  0.069
Contig-U14830-1 (Contig-U14830-1Q) /CSM_Contig/Conti...    34  0.27

>Contig-U15301-1 (Contig-U15301-1Q) /CSM_Contig/Contig-U15301-1Q.Seq.d
          Length = 695

 Score = 1366 bits (689), Expect = 0.0
 Identities = 695/695 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcaacaggtacatcaggtggtcatccagatccatgtanagatgttgactgtccagatggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tcaacaggtacatcaggtggtcatccagatccatgtanagatgttgactgtccagatggt 60

                                                                       
Query: 61  ttccattgtgaatgtaaagatggtaaaactgctaaatgtgttccaagtccaacaaccggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttccattgtgaatgtaaagatggtaaaactgctaaatgtgttccaagtccaacaaccggt 120

                                                                       
Query: 121 tcatcaagtacatcaggtggtcatccagatccatgtaaagatgtaacttgtccagatggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcatcaagtacatcaggtggtcatccagatccatgtaaagatgtaacttgtccagatggt 180

                                                                       
Query: 181 ttccattgtgaatgtaaagatggtaaanctgctaaatgtgttccaagtccaacaaccggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttccattgtgaatgtaaagatggtaaanctgctaaatgtgttccaagtccaacaaccggt 240

                                                                       
Query: 241 tcatcaagtacatcaggtggtaacactaacccatgttcaaatgtaaattgtccagatggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcatcaagtacatcaggtggtaacactaacccatgttcaaatgtaaattgtccagatggt 300

                                                                       
Query: 301 ttctattgtgaatgttgcgttgttgcccatagaccaccaccaaaatgctctttaagatgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttctattgtgaatgttgcgttgttgcccatagaccaccaccaaaatgctctttaagatgt 360

                                                                       
Query: 361 ccaccaagacatgaatgtagagtcaaccactttggtgaagaatgttgtgttaaagttcac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccaccaagacatgaatgtagagtcaaccactttggtgaagaatgttgtgttaaagttcac 420

                                                                       
Query: 421 cacgataaatgttcattgagatgtccaccaggccatgaatgtaaagttgatcaacatgga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cacgataaatgttcattgagatgtccaccaggccatgaatgtaaagttgatcaacatgga 480

                                                                       
Query: 481 aaagaatgttgcgttgttgcccatagaccaccaccaaaatgctcattaagatgtccacca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaagaatgttgcgttgttgcccatagaccaccaccaaaatgctcattaagatgtccacca 540

                                                                       
Query: 541 aaacatgaatgtagaatcaatcactttggtgaagaatgctgtgttaaaagtagaaatgat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaacatgaatgtagaatcaatcactttggtgaagaatgctgtgttaaaagtagaaatgat 600

                                                                       
Query: 601 tgtttaacttgtgaagacctaaactgtgaaagaaaaggtttacattgtgccatgaaaact 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtttaacttgtgaagacctaaactgtgaaagaaaaggtttacattgtgccatgaaaact 660

                                              
Query: 661 gtaccaattgataaagaaaattgttgtgaaaaagt 695
           |||||||||||||||||||||||||||||||||||
Sbjct: 661 gtaccaattgataaagaaaattgttgtgaaaaagt 695


>Contig-U16419-1 (Contig-U16419-1Q) /CSM_Contig/Contig-U16419-1Q.Seq.d
          Length = 2413

 Score =  710 bits (358), Expect = 0.0
 Identities = 386/390 (98%), Gaps = 4/390 (1%)
 Strand = Plus / Plus

                                                                        
Query: 310  gaatgttgcgttgttgcccatagaccaccaccaaaatgctctttaagatgtccaccaaga 369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1855 gaatgttgcgttgttgcccatagaccaccaccaaaatgctctttaagatgtccaccaaga 1914

                                                                        
Query: 370  catgaatgtagagtcaaccactttggtgaagaatgttgtgttaaagttcaccacgataaa 429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1915 catgaatgtagagtcaaccactttggtgaagaatgttgtgttaaagttcaccacgataaa 1974

                                                                        
Query: 430  tgttcattgagatgtccaccaggccatgaatgtaaagttgatcaacatggaaaagaatgt 489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975 tgttcattgagatgtccaccaggccatgaatgtaaagttgatcaacatggaaaagaatgt 2034

                                                                        
Query: 490  tgcgttgttgcccatagaccaccaccaaaatgctcattaagatgtccaccaaaacatgaa 549
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2035 tgcgttgttgcccatagaccaccaccaaaatgctcattaagatgtccaccaaaacatgaa 2094

                                                                        
Query: 550  tgtagaatcaatcactttggtgaagaatgctgtgttaaaagtagaaatgattgtttaact 609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2095 tgtagaatcaatcactttggtgaagaatgctgtgttaaaagtagaaatgattgtttaact 2154

                                                                        
Query: 610  tgtgaagaccta-aactgtgaaagaaaaggtttacattgtgccatgaaa-actgtaccaa 667
            |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2155 tgtgaagacctagaactgtgaaagaaaaggtttacattgtgccatgaaacactgtaccaa 2214

                                          
Query: 668  ttg-ataaag-aaaattgttgtgaaaaagt 695
            ||| |||||| |||||||||||||||||||
Sbjct: 2215 ttgcataaagcaaaattgttgtgaaaaagt 2244


 Score =  613 bits (309), Expect = e-175
 Identities = 313/315 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    tcaacaggtacatcaggtggtcatccagatccatgtanagatgttgactgtccagatggt 60
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1033 tcaacaggtacatcaggtggtcatccagatccatgtagagatgttgactgtccagatggt 1092

                                                                        
Query: 61   ttccattgtgaatgtaaagatggtaaaactgctaaatgtgttccaagtccaacaaccggt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 ttccattgtgaatgtaaagatggtaaaactgctaaatgtgttccaagtccaacaaccggt 1152

                                                                        
Query: 121  tcatcaagtacatcaggtggtcatccagatccatgtaaagatgtaacttgtccagatggt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 tcatcaagtacatcaggtggtcatccagatccatgtaaagatgtaacttgtccagatggt 1212

                                                                        
Query: 181  ttccattgtgaatgtaaagatggtaaanctgctaaatgtgttccaagtccaacaaccggt 240
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1213 ttccattgtgaatgtaaagatggtaaaactgctaaatgtgttccaagtccaacaaccggt 1272

                                                                        
Query: 241  tcatcaagtacatcaggtggtaacactaacccatgttcaaatgtaaattgtccagatggt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1273 tcatcaagtacatcaggtggtaacactaacccatgttcaaatgtaaattgtccagatggt 1332

                           
Query: 301  ttctattgtgaatgt 315
            |||||||||||||||
Sbjct: 1333 ttctattgtgaatgt 1347


 Score =  307 bits (155), Expect = 1e-83
 Identities = 204/221 (92%)
 Strand = Plus / Plus

                                                                        
Query: 8    gtacatcaggtggtcatccagatccatgtanagatgttgactgtccagatggtttccatt 67
            |||||||||||||||||||||||||||||| ||||||    |||||||||||||||||||
Sbjct: 1160 gtacatcaggtggtcatccagatccatgtaaagatgtaacttgtccagatggtttccatt 1219

                                                                        
Query: 68   gtgaatgtaaagatggtaaaactgctaaatgtgttccaagtccaacaaccggttcatcaa 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 gtgaatgtaaagatggtaaaactgctaaatgtgttccaagtccaacaaccggttcatcaa 1279

                                                                        
Query: 128  gtacatcaggtggtcatccagatccatgtaaagatgtaacttgtccagatggtttccatt 187
            |||||||||||||| |  |  | ||||||  | |||||| |||||||||||||||| |||
Sbjct: 1280 gtacatcaggtggtaacactaacccatgttcaaatgtaaattgtccagatggtttctatt 1339

                                                     
Query: 188  gtgaatgtaaagatggtaaanctgctaaatgtgttccaagt 228
            |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1340 gtgaatgtaaagatggtaaaactgctaaatgtgttccaagt 1380


 Score =  238 bits (120), Expect = 9e-63
 Identities = 145/152 (95%), Gaps = 1/152 (0%)
 Strand = Plus / Plus

                                                                        
Query: 438  gagatgtccaccagg-ccatgaatgtaaagttgatcaacatggaaaagaatgttgcgttg 496
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1808 gagatgcccaccagggccatgaatgtaaagttgatcaacatggaaaagaatgttgcgttg 1867

                                                                        
Query: 497  ttgcccatagaccaccaccaaaatgctcattaagatgtccaccaaaacatgaatgtagaa 556
            |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| 
Sbjct: 1868 ttgcccatagaccaccaccaaaatgctctttaagatgtccaccaagacatgaatgtagag 1927

                                            
Query: 557  tcaatcactttggtgaagaatgctgtgttaaa 588
            |||| ||||||||||||||||| |||||||||
Sbjct: 1928 tcaaccactttggtgaagaatgttgtgttaaa 1959


 Score = 34.2 bits (17), Expect = 0.27
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 346  tgctctttaagatgtcc 362
            |||||||||||||||||
Sbjct: 1411 tgctctttaagatgtcc 1427


 Score = 32.2 bits (16), Expect = 1.1
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 453  ccatgaatgtaaagtt 468
            ||||||||||||||||
Sbjct: 1530 ccatgaatgtaaagtt 1545


 Score = 30.2 bits (15), Expect = 4.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 7   ggtacatcaggtggt 21
           |||||||||||||||
Sbjct: 726 ggtacatcaggtggt 740


 Score = 30.2 bits (15), Expect = 4.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 248 gtacatcaggtggta 262
           |||||||||||||||
Sbjct: 727 gtacatcaggtggta 741


>Contig-U13200-1 (Contig-U13200-1Q) /CSM_Contig/Contig-U13200-1Q.Seq.d
          Length = 612

 Score =  660 bits (333), Expect = 0.0
 Identities = 339/342 (99%)
 Strand = Plus / Plus

                                                                       
Query: 310 gaatgttgcgttgttgcccatagaccaccaccaaaatgctctttaagatgtccaccaaga 369
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gaatgttgcgttgttgcccatagaccaccaccaaaatgctctttaagatgtccaccaaga 330

                                                                       
Query: 370 catgaatgtagagtcaaccactttggtgaagaatgttgtgttaaagttcaccacgataaa 429
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 catgaatgtagagtcaaccactttggtgaagaatgttgtgttaaagttcaccacgataaa 390

                                                                       
Query: 430 tgttcattgagatgtccaccaggccatgaatgtaaagttgatcaacatggaaaagaatgt 489
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tgttcattgagatgtccaccaggccatgaatgtaaagttgatcaacatggaaaagaatgt 450

                                                                       
Query: 490 tgcgttgttgcccatagaccaccaccaaaatgctcattaagatgtccaccaaaacatgaa 549
           |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 451 tgcgttgttgcccatagaccaccaccaaaatgctcattnagatgtccaccnaaacatgaa 510

                                                                       
Query: 550 tgtagaatcaatcactttggtgaagaatgctgtgttaaaagtagaaatgattgtttaact 609
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 511 tgtagaatcaatcactttggtgaagaatgctgtgttaaaagtagaaangattgtttaact 570

                                                     
Query: 610 tgtgaagacctaaactgtgaaagaaaaggtttacattgtgcc 651
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tgtgaagacctaaactgtgaaagaaaaggtttacattgtgcc 612


 Score =  252 bits (127), Expect = 6e-67
 Identities = 145/151 (96%)
 Strand = Plus / Plus

                                                                       
Query: 438 gagatgtccaccaggccatgaatgtaaagttgatcaacatggaaaagaatgttgcgttgt 497
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gagatgcccaccaggccatgaatgtaaagttgatcaacatggaaaagaatgttgcgttgt 284

                                                                       
Query: 498 tgcccatagaccaccaccaaaatgctcattaagatgtccaccaaaacatgaatgtagaat 557
           ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |
Sbjct: 285 tgcccatagaccaccaccaaaatgctctttaagatgtccaccaagacatgaatgtagagt 344

                                          
Query: 558 caatcactttggtgaagaatgctgtgttaaa 588
           ||| ||||||||||||||||| |||||||||
Sbjct: 345 caaccactttggtgaagaatgttgtgttaaa 375


 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 346 tgctctttaagatgtccaccaa 367
           ||||||||||||||||||||||
Sbjct: 1   tgctctttaagatgtccaccaa 22


 Score = 42.1 bits (21), Expect = 0.001
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                
Query: 520 tgctcattaagatgtccaccaaa-acatgaatgtaga 555
           ||||| |||||||||||||||||  ||||||||||||
Sbjct: 1   tgctctttaagatgtccaccaaattcatgaatgtaga 37


 Score = 36.2 bits (18), Expect = 0.069
 Identities = 33/38 (86%)
 Strand = Plus / Plus

                                                 
Query: 454 catgaatgtaaagttgatcaacatggaaaagaatgttg 491
           |||||||||||| ||||| | ||||| ||| |||||||
Sbjct: 52  catgaatgtaaatttgatgatcatggtaaaaaatgttg 89


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7999
Number of Sequences: 8402
Number of extensions: 7999
Number of successful extensions: 883
Number of sequences better than 10.0: 67
length of query: 695
length of database: 8,075,542
effective HSP length: 16
effective length of query: 679
effective length of database: 7,941,110
effective search space: 5392013690
effective search space used: 5392013690
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.18
Homology vs DNA 
Query= Contig-U15301-1 (Contig-U15301-1Q) /CSM_Contig/Contig-U15301-1Q.Seq.d
         (695 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ355462) Dictyostelium discoideum cDNA clone:dda57m05, 3' ...  1366   0.0    1
(U25144) Dictyostelium discoideum spore coat protein SP87 (P...   765   0.0    2
(AC117267) Dictyostelium discoideum chromosome 2 map 5836255...   765   0.0    2
(BJ375922) Dictyostelium discoideum cDNA clone:ddc20e14, 3' ...   712   0.0    5
(BJ380844) Dictyostelium discoideum cDNA clone:ddc39c17, 3' ...   323   0.0    7
(AU053531) Dictyostelium discoideum slug cDNA, clone SLI849.      765   0.0    1
(AU053495) Dictyostelium discoideum slug cDNA, clone SLI769.      765   0.0    1
(AU053431) Dictyostelium discoideum slug cDNA, clone SLI640.      765   0.0    1
(AU052492) Dictyostelium discoideum slug cDNA, clone SLD417.      765   0.0    1
(AU039818) Dictyostelium discoideum slug cDNA, clone SLG501.      765   0.0    1
(AU039739) Dictyostelium discoideum slug cDNA, clone SLG302.      765   0.0    1
(AU039682) Dictyostelium discoideum slug cDNA, clone SLG176.      765   0.0    1
(AU039675) Dictyostelium discoideum slug cDNA, clone SLG163.      765   0.0    1
(AU039658) Dictyostelium discoideum slug cDNA, clone SLG130.      765   0.0    1
(AU039611) Dictyostelium discoideum slug cDNA, clone SLE838.      765   0.0    1
(AU039533) Dictyostelium discoideum slug cDNA, clone SLE709.      765   0.0    1
(AU039532) Dictyostelium discoideum slug cDNA, clone SLE706.      765   0.0    1
(AU039480) Dictyostelium discoideum slug cDNA, clone SLH866.      765   0.0    1
(AU034110) Dictyostelium discoideum slug cDNA, clone SLB753.      765   0.0    1
(AU033832) Dictyostelium discoideum slug cDNA, clone SLB494.      765   0.0    1
(AU033680) Dictyostelium discoideum slug cDNA, clone SLB309.      765   0.0    1
(AU033514) Dictyostelium discoideum slug cDNA, clone SLB119.      765   0.0    1
(AU033413) Dictyostelium discoideum slug cDNA, clone SLA740.      765   0.0    1
(AU033346) Dictyostelium discoideum slug cDNA, clone SLA644.      765   0.0    1
(BJ402714) Dictyostelium discoideum cDNA clone:dds17d22, 3' ...   765   0.0    1
(BJ400609) Dictyostelium discoideum cDNA clone:dds14b01, 3' ...   765   0.0    1
(BJ385578) Dictyostelium discoideum cDNA clone:ddc55m12, 3' ...   765   0.0    1
(BJ383314) Dictyostelium discoideum cDNA clone:ddc52h14, 3' ...   765   0.0    1
(BJ382441) Dictyostelium discoideum cDNA clone:ddc44c19, 3' ...   765   0.0    1
(BJ382163) Dictyostelium discoideum cDNA clone:ddc43h04, 3' ...   765   0.0    1
(BJ382023) Dictyostelium discoideum cDNA clone:ddc43k18, 3' ...   765   0.0    1
(BJ381362) Dictyostelium discoideum cDNA clone:ddc41d12, 3' ...   765   0.0    1
(BJ381280) Dictyostelium discoideum cDNA clone:ddc41c02, 3' ...   765   0.0    1
(BJ380750) Dictyostelium discoideum cDNA clone:ddc39n04, 3' ...   765   0.0    1
(BJ374577) Dictyostelium discoideum cDNA clone:ddc9d02, 3' e...   765   0.0    1
(BJ374239) Dictyostelium discoideum cDNA clone:ddc6i03, 3' e...   765   0.0    1
(BJ350917) Dictyostelium discoideum cDNA clone:dda41n08, 3' ...   765   0.0    1
(BJ349358) Dictyostelium discoideum cDNA clone:dda36b08, 3' ...   765   0.0    1
(BJ348029) Dictyostelium discoideum cDNA clone:dda31o24, 3' ...   765   0.0    1
(BJ342766) Dictyostelium discoideum cDNA clone:dda1b16, 3' e...   765   0.0    1
(BJ341161) Dictyostelium discoideum cDNA clone:dda5p12, 3' e...   765   0.0    1
(BJ339971) Dictyostelium discoideum cDNA clone:dda11k05, 3' ...   765   0.0    1
(BJ402630) Dictyostelium discoideum cDNA clone:dds17e15, 3' ...   763   0.0    1
(BJ385594) Dictyostelium discoideum cDNA clone:ddc55a13, 3' ...   763   0.0    1
(BJ384261) Dictyostelium discoideum cDNA clone:ddc48g21, 3' ...   763   0.0    1
(BJ383655) Dictyostelium discoideum cDNA clone:ddc53d21, 3' ...   763   0.0    1
(BJ383350) Dictyostelium discoideum cDNA clone:ddc52p18, 3' ...   763   0.0    1
(BJ383347) Dictyostelium discoideum cDNA clone:ddc52p14, 3' ...   763   0.0    1
(BJ383232) Dictyostelium discoideum cDNA clone:ddc52f09, 3' ...   763   0.0    1
(BJ383213) Dictyostelium discoideum cDNA clone:ddc52b10, 3' ...   763   0.0    1
(BJ382516) Dictyostelium discoideum cDNA clone:ddc45b02, 3' ...   763   0.0    1
(BJ382300) Dictyostelium discoideum cDNA clone:ddc44e09, 3' ...   763   0.0    1
(BJ382267) Dictyostelium discoideum cDNA clone:ddc44m06, 3' ...   763   0.0    1
(BJ380413) Dictyostelium discoideum cDNA clone:ddc38g04, 3' ...   763   0.0    1
(BJ379016) Dictyostelium discoideum cDNA clone:ddc33d16, 3' ...   763   0.0    1
(BJ354090) Dictyostelium discoideum cDNA clone:dda52a17, 3' ...   763   0.0    1
(BJ354010) Dictyostelium discoideum cDNA clone:dda52p05, 3' ...   763   0.0    1
(BJ350102) Dictyostelium discoideum cDNA clone:dda38o16, 3' ...   763   0.0    1
(BJ348646) Dictyostelium discoideum cDNA clone:dda33j23, 3' ...   763   0.0    1
(C92815) Dictyostelium discoideum slug cDNA, clone SSF378.        759   0.0    1
(BJ401177) Dictyostelium discoideum cDNA clone:dds22l08, 3' ...   759   0.0    1
(BJ386498) Dictyostelium discoideum cDNA clone:ddc58o08, 3' ...   759   0.0    1
(BJ384274) Dictyostelium discoideum cDNA clone:ddc48i24, 3' ...   759   0.0    1
(BJ353903) Dictyostelium discoideum cDNA clone:dda51g22, 3' ...   759   0.0    1
(BJ349745) Dictyostelium discoideum cDNA clone:dda37c14, 3' ...   759   0.0    1
(BJ342934) Dictyostelium discoideum cDNA clone:dda15a16, 3' ...   759   0.0    1
(BJ402843) Dictyostelium discoideum cDNA clone:dds18o08, 3' ...   613   0.0    5
(BJ390859) Dictyostelium discoideum cDNA clone:dds14b01, 5' ...   613   0.0    5
(BJ340910) Dictyostelium discoideum cDNA clone:dda4j10, 3' e...   613   0.0    5
(BJ401815) Dictyostelium discoideum cDNA clone:dds19a16, 3' ...   613   0.0    5
(BJ347645) Dictyostelium discoideum cDNA clone:dda27p18, 3' ...   613   0.0    5
(BJ347199) Dictyostelium discoideum cDNA clone:dda26l07, 3' ...   613   0.0    5
(AU039814) Dictyostelium discoideum slug cDNA, clone SLG487.      757   0.0    1
(AU037461) Dictyostelium discoideum slug cDNA, clone SSD665.      757   0.0    1
(C93794) Dictyostelium discoideum slug cDNA, clone SSL726.        757   0.0    1
(BJ401897) Dictyostelium discoideum cDNA clone:dds19c19, 3' ...   757   0.0    1
(BJ400248) Dictyostelium discoideum cDNA clone:dds9n09, 3' e...   757   0.0    1
(BJ399316) Dictyostelium discoideum cDNA clone:dds5m09, 3' e...   757   0.0    1
(BJ383810) Dictyostelium discoideum cDNA clone:ddc47f08, 3' ...   757   0.0    1
(BJ379977) Dictyostelium discoideum cDNA clone:ddc36j13, 3' ...   757   0.0    1
(BJ378337) Dictyostelium discoideum cDNA clone:ddc31i15, 3' ...   757   0.0    1
(BJ372955) Dictyostelium discoideum cDNA clone:ddc15j01, 3' ...   757   0.0    1
(BJ357533) Dictyostelium discoideum cDNA clone:dda63i20, 3' ...   757   0.0    1
(BJ354654) Dictyostelium discoideum cDNA clone:dda54g08, 3' ...   757   0.0    1
(BJ349650) Dictyostelium discoideum cDNA clone:dda37p01, 3' ...   757   0.0    1
(BJ342987) Dictyostelium discoideum cDNA clone:dda15p13, 3' ...   757   0.0    1
(BJ385788) Dictyostelium discoideum cDNA clone:ddc56l03, 3' ...   755   0.0    1
(BJ383351) Dictyostelium discoideum cDNA clone:ddc52a20, 3' ...   755   0.0    1
(BJ382099) Dictyostelium discoideum cDNA clone:ddc43k20, 3' ...   755   0.0    1
(BJ400383) Dictyostelium discoideum cDNA clone:dds13b04, 3' ...   753   0.0    1
(BJ379850) Dictyostelium discoideum cDNA clone:ddc36n05, 3' ...   753   0.0    1
(BJ374530) Dictyostelium discoideum cDNA clone:ddc8o11, 3' e...   753   0.0    1
(BJ386374) Dictyostelium discoideum cDNA clone:ddc58d01, 3' ...   751   0.0    1
(BJ382589) Dictyostelium discoideum cDNA clone:ddc45b08, 3' ...   751   0.0    1
(BJ378412) Dictyostelium discoideum cDNA clone:ddc31i23, 3' ...   751   0.0    1
(BJ373441) Dictyostelium discoideum cDNA clone:ddc3h06, 3' e...   605   0.0    5
(BJ400482) Dictyostelium discoideum cDNA clone:dds13o12, 3' ...   605   0.0    5
(BJ350626) Dictyostelium discoideum cDNA clone:dda40b18, 3' ...   749   0.0    1
(AU060605) Dictyostelium discoideum slug cDNA, clone SLK624.      747   0.0    1
(BJ409658) Dictyostelium discoideum cDNA clone:dds42g23, 3' ...   747   0.0    1

>(BJ355462) Dictyostelium discoideum cDNA clone:dda57m05, 3' end,
           single read.
          Length = 695

 Score = 1366 bits (689), Expect = 0.0
 Identities = 695/695 (100%)
 Strand = Plus / Minus


Query: 1   tcaacaggtacatcaggtggtcatccagatccatgtanagatgttgactgtccagatggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tcaacaggtacatcaggtggtcatccagatccatgtanagatgttgactgtccagatggt 636


Query: 61  ttccattgtgaatgtaaagatggtaaaactgctaaatgtgttccaagtccaacaaccggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ttccattgtgaatgtaaagatggtaaaactgctaaatgtgttccaagtccaacaaccggt 576


Query: 121 tcatcaagtacatcaggtggtcatccagatccatgtaaagatgtaacttgtccagatggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tcatcaagtacatcaggtggtcatccagatccatgtaaagatgtaacttgtccagatggt 516


Query: 181 ttccattgtgaatgtaaagatggtaaanctgctaaatgtgttccaagtccaacaaccggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ttccattgtgaatgtaaagatggtaaanctgctaaatgtgttccaagtccaacaaccggt 456


Query: 241 tcatcaagtacatcaggtggtaacactaacccatgttcaaatgtaaattgtccagatggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tcatcaagtacatcaggtggtaacactaacccatgttcaaatgtaaattgtccagatggt 396


Query: 301 ttctattgtgaatgttgcgttgttgcccatagaccaccaccaaaatgctctttaagatgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ttctattgtgaatgttgcgttgttgcccatagaccaccaccaaaatgctctttaagatgt 336


Query: 361 ccaccaagacatgaatgtagagtcaaccactttggtgaagaatgttgtgttaaagttcac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ccaccaagacatgaatgtagagtcaaccactttggtgaagaatgttgtgttaaagttcac 276


Query: 421 cacgataaatgttcattgagatgtccaccaggccatgaatgtaaagttgatcaacatgga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cacgataaatgttcattgagatgtccaccaggccatgaatgtaaagttgatcaacatgga 216


Query: 481 aaagaatgttgcgttgttgcccatagaccaccaccaaaatgctcattaagatgtccacca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aaagaatgttgcgttgttgcccatagaccaccaccaaaatgctcattaagatgtccacca 156


Query: 541 aaacatgaatgtagaatcaatcactttggtgaagaatgctgtgttaaaagtagaaatgat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aaacatgaatgtagaatcaatcactttggtgaagaatgctgtgttaaaagtagaaatgat 96


Query: 601 tgtttaacttgtgaagacctaaactgtgaaagaaaaggtttacattgtgccatgaaaact 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  tgtttaacttgtgaagacctaaactgtgaaagaaaaggtttacattgtgccatgaaaact 36


Query: 661 gtaccaattgataaagaaaattgttgtgaaaaagt 695
           |||||||||||||||||||||||||||||||||||
Sbjct: 35  gtaccaattgataaagaaaattgttgtgaaaaagt 1

 Score =  178 bits (90), Expect(4) = e-106
 Identities = 92/93 (98%)
 Strand = Plus / Minus


Query: 49  tgtccagatggtttccattgtgaatgtaaagatggtaaaactgctaaatgtgttccaagt 108
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 527 tgtccagatggtttccattgtgaatgtaaagatggtaaanctgctaaatgtgttccaagt 468


Query: 109 ccaacaaccggttcatcaagtacatcaggtggt 141
           |||||||||||||||||||||||||||||||||
Sbjct: 467 ccaacaaccggttcatcaagtacatcaggtggt 435

 Score =  178 bits (90), Expect(4) = e-106
 Identities = 92/93 (98%)
 Strand = Plus / Minus


Query: 169 tgtccagatggtttccattgtgaatgtaaagatggtaaanctgctaaatgtgttccaagt 228
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 647 tgtccagatggtttccattgtgaatgtaaagatggtaaaactgctaaatgtgttccaagt 588


Query: 229 ccaacaaccggttcatcaagtacatcaggtggt 261
           |||||||||||||||||||||||||||||||||
Sbjct: 587 ccaacaaccggttcatcaagtacatcaggtggt 555

 Score =  168 bits (85), Expect(4) = e-106
 Identities = 100/105 (95%)
 Strand = Plus / Minus


Query: 310 gaatgttgcgttgttgcccatagaccaccaccaaaatgctctttaagatgtccaccaaga 369
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 212 gaatgttgcgttgttgcccatagaccaccaccaaaatgctcattaagatgtccaccaaaa 153


Query: 370 catgaatgtagagtcaaccactttggtgaagaatgttgtgttaaa 414
           |||||||||||| |||| ||||||||||||||||| |||||||||
Sbjct: 152 catgaatgtagaatcaatcactttggtgaagaatgctgtgttaaa 108

 Score =  168 bits (85), Expect(4) = e-106
 Identities = 100/105 (95%)
 Strand = Plus / Minus


Query: 484 gaatgttgcgttgttgcccatagaccaccaccaaaatgctcattaagatgtccaccaaaa 543
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 386 gaatgttgcgttgttgcccatagaccaccaccaaaatgctctttaagatgtccaccaaga 327


Query: 544 catgaatgtagaatcaatcactttggtgaagaatgctgtgttaaa 588
           |||||||||||| |||| ||||||||||||||||| |||||||||
Sbjct: 326 catgaatgtagagtcaaccactttggtgaagaatgttgtgttaaa 282

 Score = 67.9 bits (34), Expect(4) = e-106
 Identities = 36/37 (97%)
 Strand = Plus / Minus


Query: 8   gtacatcaggtggtcatccagatccatgtanagatgt 44
           |||||||||||||||||||||||||||||| ||||||
Sbjct: 568 gtacatcaggtggtcatccagatccatgtaaagatgt 532

 Score = 67.9 bits (34), Expect(4) = e-106
 Identities = 36/37 (97%)
 Strand = Plus / Minus


Query: 128 gtacatcaggtggtcatccagatccatgtaaagatgt 164
           |||||||||||||||||||||||||||||| ||||||
Sbjct: 688 gtacatcaggtggtcatccagatccatgtanagatgt 652

 Score = 54.0 bits (27), Expect(4) = e-106
 Identities = 33/35 (94%)
 Strand = Plus / Minus


Query: 161 atgtaacttgtccagatggtttccattgtgaatgt 195
           |||||| |||||||||||||||| |||||||||||
Sbjct: 415 atgtaaattgtccagatggtttctattgtgaatgt 381

 Score = 54.0 bits (27), Expect(4) = e-106
 Identities = 33/35 (94%)
 Strand = Plus / Minus


Query: 281 atgtaaattgtccagatggtttctattgtgaatgt 315
           |||||| |||||||||||||||| |||||||||||
Sbjct: 535 atgtaacttgtccagatggtttccattgtgaatgt 501

 Score = 46.1 bits (23), Expect(4) = 8e-10
 Identities = 26/27 (96%)
 Strand = Plus / Minus


Query: 49  tgtccagatggtttccattgtgaatgt 75
           ||||||||||||||| |||||||||||
Sbjct: 407 tgtccagatggtttctattgtgaatgt 381

 Score = 46.1 bits (23), Expect(4) = 8e-10
 Identities = 26/27 (96%)
 Strand = Plus / Minus


Query: 289 tgtccagatggtttctattgtgaatgt 315
           ||||||||||||||| |||||||||||
Sbjct: 647 tgtccagatggtttccattgtgaatgt 621

 Score = 34.2 bits (17), Expect(4) = 8e-10
 Identities = 32/37 (86%)
 Strand = Plus / Minus


Query: 427 aaatgttcattgagatgtccaccaggccatgaatgta 463
           ||||| ||||| ||||||||||||   ||||||||||
Sbjct: 179 aaatgctcattaagatgtccaccaaaacatgaatgta 143

 Score = 34.2 bits (17), Expect(4) = 8e-10
 Identities = 32/37 (86%)
 Strand = Plus / Minus


Query: 517 aaatgctcattaagatgtccaccaaaacatgaatgta 553
           ||||| ||||| ||||||||||||   ||||||||||
Sbjct: 269 aaatgttcattgagatgtccaccaggccatgaatgta 233

 Score = 34.2 bits (17), Expect(4) = 8e-10
 Identities = 23/25 (92%)
 Strand = Plus / Minus


Query: 355 agatgtccaccaagacatgaatgta 379
           |||||||||||| | ||||||||||
Sbjct: 257 agatgtccaccaggccatgaatgta 233

 Score = 34.2 bits (17), Expect(4) = 8e-10
 Identities = 23/25 (92%)
 Strand = Plus / Minus


Query: 439 agatgtccaccaggccatgaatgta 463
           |||||||||||| | ||||||||||
Sbjct: 341 agatgtccaccaagacatgaatgta 317

 Score = 28.2 bits (14), Expect(4) = 8e-10
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 8   gtacatcaggtggt 21
           ||||||||||||||
Sbjct: 448 gtacatcaggtggt 435

 Score = 28.2 bits (14), Expect(4) = 8e-10
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 248 gtacatcaggtggt 261
           ||||||||||||||
Sbjct: 688 gtacatcaggtggt 675

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 776,613,293
Number of extensions: 43481699
Number of successful extensions: 3138170
Number of sequences better than 10.0: 643
Length of query: 695
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 671
Effective length of database: 100,704,341,533
Effective search space: 67572613168643
Effective search space used: 67572613168643
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.15
Homology vs Protein 
Query= Contig-U15301-1 (Contig-U15301-1Q) /CSM_Contig/Contig-U15301-1Q.Seq.d
         (695 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom...   312   7e-84
(P15270) RecName: Full=Spore coat protein SP60; Flags: Precursor...   144   2e-33
X52105_1(X52105|pid:none) Dictyostelium discoideum SP60 gene for...   102   1e-20
S07638(S07638;A60942;B60942) spore coat protein SP96 precursor -...    73   7e-12
(P14328) RecName: Full=Spore coat protein SP96;  &AC117075_49(AC...    73   7e-12
(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr...    68   3e-10
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87...    67   5e-10
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;...    67   7e-10
(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor;        66   9e-10
(P54704) RecName: Full=Spore coat protein SP85; AltName: Full=Ce...    62   2e-08
S72639_1(S72639|pid:none) PspB=prespore-specific gene {5' region...    57   4e-07
BC131709_1(BC131709|pid:none) Homo sapiens cysteine-rich PAK1 in...    52   2e-05
T22274(T22274)hypothetical protein F46B3.9 - Caenorhabditis eleg...    45   0.002
AK128809_1(AK128809|pid:none) Homo sapiens cDNA FLJ45978 fis, cl...    44   0.005
(P40798) RecName: Full=Protein shuttle craft;  &AE014134_2656(AE...    44   0.006
FJ380206_1(FJ380206|pid:none) Haliotis discus discus antistasin-...    44   0.006
AE014134_2657(AE014134|pid:none) Drosophila melanogaster chromos...    44   0.006
(O70554) RecName: Full=Small proline-rich protein 2B;  &AJ005560...    42   0.018
AF245486_1(AF245486|pid:none) Polysphondylium pallidum spore coa...    42   0.018
BC132518_1(BC132518|pid:none) Mus musculus small proline-rich pr...    42   0.018
A55035(A55035;S45034) cysteine-rich protein CRP1 - earthworm (En...    42   0.023
AL845369_7(AL845369|pid:none) Zebrafish DNA sequence from clone ...    41   0.031
AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A...    41   0.031
Z98877_12(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, com...    41   0.031
CP000497_120(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...    41   0.031
AK003998_1(AK003998|pid:none) Mus musculus 18-day embryo whole b...    41   0.031
T27283(T27283)hypothetical protein Y64G10A.f - Caenorhabditis el...    41   0.031
AK126919_1(AK126919|pid:none) Homo sapiens cDNA FLJ44971 fis, cl...    41   0.040
AK091762_1(AK091762|pid:none) Homo sapiens cDNA FLJ34443 fis, cl...    41   0.040
AB210576_1(AB210576|pid:none) Ciona intestinalis mRNA for transc...    40   0.052
BC123193_1(BC123193|pid:none) Xenopus laevis follistatin-like 3 ...    40   0.068
AY788095_2(AY788095|pid:none) Sus scrofa mitochondrial associate...    40   0.068
(O70560) RecName: Full=Small proline-rich protein 2I;  &AJ005567...    40   0.068
AB041857_1(AB041857|pid:none) Ciona intestinalis mRNA for Ci-MET...    40   0.089
AE014296_356(AE014296|pid:none) Drosophila melanogaster chromoso...    40   0.089
A49175(A49175;PH1570;S32113) Motch B protein - mouse (fragment) ...    40   0.089
AK155137_1(AK155137|pid:none) Mus musculus NOD-derived CD11c +ve...    40   0.089
BC172642_1(BC172642|pid:none) Synthetic construct Mus musculus c...    40   0.089
(P38977) RecName: Full=Antistasin;          Short=ATS; AltName: ...    39   0.12
AK098809_1(AK098809|pid:none) Homo sapiens cDNA FLJ25943 fis, cl...    34   0.18
BT071595_1(BT071595|pid:none) Picea sitchensis clone WS02926_J21...    39   0.20
DQ976710_7(DQ976710|pid:none) Hylobates klossii NOTCH2 (NOTCH2) ...    39   0.20
(Q04721) RecName: Full=Neurogenic locus notch homolog protein 2;...    39   0.20
AF308601_1(AF308601|pid:none) Homo sapiens NOTCH 2 (N2) mRNA, co...    39   0.20
AX357059_1(AX357059|pid:none) Sequence 21 from Patent EP1175909....    39   0.20
BC147443_1(BC147443|pid:none) Mus musculus late cornified envelo...    38   0.26
AX805769_1(AX805769|pid:none) Sequence 1 from Patent WO03060109....    38   0.26
AL353607_3(AL353607|pid:none) Human DNA sequence from clone RP11...    38   0.26
AK003951_1(AK003951|pid:none) Mus musculus 18-day embryo whole b...    38   0.26
AK003705_1(AK003705|pid:none) Mus musculus 18-day embryo whole b...    38   0.26
BT059209_1(BT059209|pid:none) Salmo salar clone ssal-rgf-532-249...    38   0.34
FJ039903_1(FJ039903|pid:none) Hordeum vulgare DEP1 (DEP1) mRNA, ...    38   0.34
FJ039902_1(FJ039902|pid:none) Triticum aestivum DEP1 (DEP1) mRNA...    38   0.34
AY628699_2(AY628699|pid:none) Sea perch iridovirus strain CH-1 O...    37   0.44
(O70557) RecName: Full=Small proline-rich protein 2F;  &AJ005564...    37   0.44
AK159557_1(AK159557|pid:none) Mus musculus osteoclast-like cell ...    37   0.44
T25768(T25768)hypothetical protein F46F11.7 - Caenorhabditis ele...    37   0.44
U88173_9(U88173|pid:none) Caenorhabditis elegans cosmid F46F11, ...    37   0.44
AL669839_1(AL669839|pid:none) Mouse DNA sequence from clone RP23...    37   0.58
CP000080_59(CP000080|pid:none) Leishmania major strain Friedlin ...    37   0.58
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ...    37   0.58
FN357711_14(FN357711|pid:none) Schistosoma mansoni genome sequen...    37   0.58
(Q9BYQ6) RecName: Full=Keratin-associated protein 4-11; AltName:...    37   0.58
(Q9WVB4) RecName: Full=Slit homolog 3 protein;          Short=Sl...    37   0.58
(Q96RM1) RecName: Full=Small proline-rich protein 2F;          S...    37   0.58
AF214523_1(AF214523|pid:none) Drosophila melanogaster SP460 mRNA...    37   0.58
(O88280) RecName: Full=Slit homolog 3 protein;          Short=Sl...    37   0.58
BC150780_1(BC150780|pid:none) Mus musculus slit homolog 3 (Droso...    37   0.58
AF056116_15(AF056116|pid:none) Fugu rubripes serine/threonine ki...    37   0.58
AY280362_1(AY280362|pid:none) Homo sapiens EGF domain-containing...    37   0.75
T00209(T00209)MEGF8 protein - human (fragment)                         37   0.75
BC103351_1(BC103351|pid:none) Bos taurus SPARC-like 1 (hevin), m...    37   0.75
AF176515_1(AF176515|pid:none) Mus musculus EIG3 protein (Eig3) m...    37   0.75
AB011534_1(AB011534|pid:none) Rattus norvegicus mRNA for MEGF8, ...    37   0.75
AB011541_1(AB011541|pid:none) Homo sapiens mRNA for MEGF8, parti...    37   0.75
EU975774_1(EU975774|pid:none) Zea mays clone 500142 hypothetical...    37   0.75
(Q9QYP0) RecName: Full=Multiple epidermal growth factor-like dom...    37   0.75
EU643480_17(EU643480|pid:none) Adineta vaga clone Av_TEL_L_B tra...    37   0.75
(P22531) RecName: Full=Small proline-rich protein 2E;          S...    36   0.98
AP006527_10(AP006527|pid:none) Oryza sativa Japonica Group genom...    36   0.98
EU973332_1(EU973332|pid:none) Zea mays clone 396882 keratin-asso...    36   0.98
AM478090_2(AM478090|pid:none) Vitis vinifera contig VV78X122122....    36   0.98
BC168665_1(BC168665|pid:none) Rattus norvegicus platelet endothe...    36   0.98
(P49901) RecName: Full=Sperm mitochondrial-associated cysteine-r...    36   1.3
AK222522_1(AK222522|pid:none) Homo sapiens mRNA for granulin var...    36   1.3
CR860771_1(CR860771|pid:none) Pongo abelii mRNA; cDNA DKFZp459H0...    36   1.3
AY901986_1(AY901986|pid:none) Xenopus laevis proprotein converta...    36   1.3
AJ275213_1(AJ275213|pid:none) Homo sapiens mRNA for stabilin-1 (...    36   1.3
AY901987_1(AY901987|pid:none) Xenopus laevis proprotein converta...    36   1.3
AY845260_1(AY845260|pid:none) Mytilus edulis clone 2 foot protei...    36   1.3
AB052956_1(AB052956|pid:none) Homo sapiens mRNA for FELE-1, comp...    36   1.3
AL590992_2(AL590992|pid:none) Mouse DNA sequence from clone RP23...    36   1.3
(P28799) RecName: Full=Granulins; AltName: Full=Proepithelin;   ...    36   1.3
AK023348_1(AK023348|pid:none) Homo sapiens cDNA FLJ13286 fis, cl...    36   1.3
AY661545_1(AY661545|pid:none) Olive flounder iridovirus laminin-...    36   1.3
X89960_1(X89960|pid:none) H.sapiens mRNA for mitochondrial capsu...    36   1.3
AB081339_1(AB081339|pid:none) Homo sapiens KRTAP1.9 gene for ker...    36   1.3
DQ786774_1(DQ786774|pid:none) Homo sapiens FEX1 mRNA, complete c...    36   1.3
S28291(S28291)hypothetical protein ZC84.1 - Caenorhabditis elegans     35   1.7
(O88799) RecName: Full=Zonadhesin; Flags: Precursor;  &T42215(T4...    35   1.7
AY570730_1(AY570730|pid:none) Danio rerio matrilin-4-like protei...    35   1.7
AB011671_1(AB011671|pid:none) Ovis aries Fas mRNA, complete cds.       35   1.7
AB463497_1(AB463497|pid:none) Synthetic construct DNA, clone: pF...    35   1.7
AC116100_6(AC116100|pid:none) Dictyostelium discoideum chromosom...    35   1.7
(Q18034) RecName: Full=Transcriptional repressor NF-X1 homolog; ...    35   1.7
BC152016_1(BC152016|pid:none) Danio rerio cDNA clone IMAGE:81055...    35   1.7
(Q6WN34) RecName: Full=Chordin-like protein 2; AltName: Full=Cho...    35   1.7
AK304519_1(AK304519|pid:none) Homo sapiens cDNA FLJ61081 complet...    35   1.7
AL591417_4(AL591417|pid:none) Mouse DNA sequence from clone RP23...    35   1.7
AJ416893_1(AJ416893|pid:none) Vaccinia virus A53R gene for tumou...    35   1.7
DQ121394_176(DQ121394|pid:none) Vaccinia virus strain Lister clo...    35   1.7
AL592545_3(AL592545|pid:none) Mouse DNA sequence from clone RP23...    35   1.7
AX817295_1(AX817295|pid:none) Sequence 43 from Patent WO02081517.      35   2.2
AP008215_740(AP008215|pid:none) Oryza sativa (japonica cultivar-...    35   2.2
BC146386_1(BC146386|pid:none) Synthetic construct Homo sapiens c...    35   2.2
AP005419_8(AP005419|pid:none) Oryza sativa Japonica Group genomi...    35   2.2
AY835595_1(AY835595|pid:none) Ovis aries keratin intermediate-fi...    35   2.2
I47109(I47109) high-sulfur wool matrix protein B2C - sheep  &L33...    35   2.2
AB169715_1(AB169715|pid:none) Macaca fascicularis brain cDNA, cl...    35   2.2
AX817297_1(AX817297|pid:none) Sequence 45 from Patent WO02081517.      35   2.2
AK030408_1(AK030408|pid:none) Mus musculus adult male pituitary ...    35   2.2
AK131904_1(AK131904|pid:none) Mus musculus adult male tongue cDN...    35   2.2
AK009782_1(AK009782|pid:none) Mus musculus adult male tongue cDN...    35   2.2
AK122377_1(AK122377|pid:none) Mus musculus mRNA for mKIAA0817 pr...    35   2.2
AL591496_16(AL591496|pid:none) Mouse DNA sequence from clone RP2...    35   2.2
(Q9BYQ9) RecName: Full=Keratin-associated protein 4-8; AltName: ...    35   2.2
(Q8R4Y4) RecName: Full=Stabilin-1; AltName: Full=Fasciclin, EGF-...    35   2.2
(Q8VIK5) RecName: Full=Platelet endothelial aggregation receptor...    35   2.2
AF461685_1(AF461685|pid:none) Mus musculus Jedi-736 protein mRNA...    35   2.2
BC036727_1(BC036727|pid:none) Mus musculus multiple EGF-like-dom...    35   2.2
BC031166_1(BC031166|pid:none) Mus musculus stabilin 1, mRNA (cDN...    35   2.2
AL591496_15(AL591496|pid:none) Mouse DNA sequence from clone RP2...    35   2.2
AF444274_1(AF444274|pid:none) Mus musculus Jedi protein mRNA, co...    35   2.2
AY812184_1(AY812184|pid:none) Schistosoma japonicum SJCHGC08587 ...    35   2.9
AY678277_238(AY678277|pid:none) Vaccinia virus strain LC16mO, co...    35   2.9
D88550(D88550)protein ZC84.6 [imported] - Caenorhabditis elegans       35   2.9
AK066765_1(AK066765|pid:none) Oryza sativa Japonica Group cDNA c...    35   2.9
Z19157_4(Z19157|pid:none) Caenorhabditis elegans Cosmid ZC84, co...    35   2.9
(Q6TU45) RecName: Full=Probable spore coat protein sigD; AltName...    35   2.9
BC134630_1(BC134630|pid:none) Bos taurus keratin associated prot...    35   2.9
AJ133651_1(AJ133651|pid:none) Trichoderma harzianum cmp1 gene.         35   2.9
I38869(I38869) transcription factor NFX1 [imported] - human  &U1...    35   2.9
FJ501956_1(FJ501956|pid:none) Oryza sativa Indica Group keratin ...    35   2.9
AY313848_190(AY313848|pid:none) Vaccinia virus strain Acambis cl...    35   2.9
AB003753_1(AB003753|pid:none) Rattus norvegicus genes for high s...    35   2.9
EU285556_1(EU285556|pid:none) Amphimedon queenslandica hedgling ...    35   2.9
AP005643_12(AP005643|pid:none) Oryza sativa Japonica Group genom...    35   2.9
(P04275) RecName: Full=von Willebrand factor;          Short=vWF...    34   3.7
AF482758_195(AF482758|pid:none) Cowpox virus strain Brighton Red...    34   3.7
(P24054) RecName: Full=SPARC-like protein 1; AltName: Full=Matri...    34   3.7
AB058677_1(AB058677|pid:none) Homo sapiens mRNA for MEGF11 prote...    34   3.7
AB300051_1(AB300051|pid:none) Homo sapiens mRNA for MEGF11, comp...    34   3.7
B27725(B27725) small proline-rich protein spr2 - human  &M20030_...    34   3.7
BC061755_1(BC061755|pid:none) Rattus norvegicus SPARC-like 1 (he...    34   3.7
(P02438) RecName: Full=Keratin, high-sulfur matrix protein, B2A;...    34   3.7
(Q5T754) RecName: Full=Late cornified envelope protein 1F; AltNa...    34   3.7
(Q32L04) RecName: Full=Late cornified envelope-like proline-rich...    34   3.7
A09265_1(A09265|pid:none) Partial synthetic nucleotide sequence,...    34   3.7
BC117419_1(BC117419|pid:none) Homo sapiens multiple EGF-like-dom...    34   3.7
AM746676_2058(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...    34   3.7
(Q5T753) RecName: Full=Late cornified envelope protein 1E; AltNa...    34   3.7
(Q5TA79) RecName: Full=Late cornified envelope protein 2A; AltNa...    34   3.7
(Q9BYS1) RecName: Full=Keratin-associated protein 1-5; AltName: ...    34   4.9
AY449461_16(AY449461|pid:none) Oikopleura dioica clone BACOIKO00...    34   4.9
(Q80V70) RecName: Full=Multiple epidermal growth factor-like dom...    34   4.9
AB085695_1(AB085695|pid:none) Homo sapiens mRNA for URCC5, compl...    34   4.9
(A8MXZ3) RecName: Full=Putative keratin-associated protein 9-2-l...    34   4.9
AY901988_1(AY901988|pid:none) Xenopus laevis proprotein converta...    34   4.9
Z30423_2(Z30423|pid:none) Caenorhabditis elegans Cosmid T20G5, c...    34   4.9
(Q6ZNB6) RecName: Full=NF-X1-type zinc finger protein NFXL1; Alt...    34   4.9
AB055057_1(AB055057|pid:none) Homo sapiens hKAP1.7 mRNA for kera...    34   4.9
DQ177286_1(DQ177286|pid:none) Danio rerio Slit1a (slit1a) mRNA, ...    34   4.9
(P34576) RecName: Full=Transmembrane cell adhesion receptor mua-...    34   4.9
EU410304_247(EU410304|pid:none) Vaccinia virus GLV-1h68, complet...    34   4.9
AY596304_1(AY596304|pid:none) Chlamydomonas reinhardtii unknown ...    34   4.9
Y17728_1(Y17728|pid:none) Vaccinia virus A53R gene, clone pAK2.        34   4.9
AM270369_22(AM270369|pid:none) Aspergillus niger contig An16c017...    34   4.9
AE014186_1(AE014186|pid:none) Plasmodium falciparum 3D7 chromoso...    34   4.9
EU072820_1(EU072820|pid:none) Drosophila americana isolate IR04....    34   4.9
BC140650_1(BC140650|pid:none) Bos taurus Fas (TNF receptor super...    34   4.9
BC072469_1(BC072469|pid:none) Rattus norvegicus granulin, mRNA (...    34   4.9
EU072824_1(EU072824|pid:none) Drosophila americana isolate IR04....    34   4.9
AC012647_8(AC012647|pid:none) Trypanosoma brucei chromosome 2 cl...    33   6.4
AK010064_1(AK010064|pid:none) Mus musculus adult male tongue cDN...    33   6.4
AM494966_61(AM494966|pid:none) Leishmania braziliensis chromosom...    33   6.4
DQ439815_188(DQ439815|pid:none) Vaccinia virus strain DUKE, comp...    33   6.4
Z81540_13(Z81540|pid:none) Caenorhabditis elegans Cosmid F46B3, ...    33   6.4
AK003412_1(AK003412|pid:none) Mus musculus 18-day embryo whole b...    33   6.4
(P41990) RecName: Full=Anterior pharynx in excess protein 1; Fla...    33   6.4
D88991(D88991)protein apx-1 [imported] - Caenorhabditis elegans        33   6.4
AM910990_169(AM910990|pid:none) Plasmodium knowlesi strain H chr...    33   6.4
AC139706_5(AC139706|pid:none) Medicago truncatula clone mth2-28n...    33   6.4
AK010137_1(AK010137|pid:none) Mus musculus adult male tongue cDN...    33   6.4
AK009424_1(AK009424|pid:none) Mus musculus adult male tongue cDN...    33   6.4
CR860411_1(CR860411|pid:none) Pongo abelii mRNA; cDNA DKFZp459B1...    33   8.3
CP001055_471(CP001055|pid:none) Elusimicrobium minutum Pei191, c...    33   8.3
AB172013_1(AB172013|pid:none) Macaca fascicularis brain cDNA clo...    33   8.3
AK289884_1(AK289884|pid:none) Homo sapiens cDNA FLJ77955 complet...    33   8.3
BX883044_5(BX883044|pid:none) Rattus norvegicus chromosome 20, m...    33   8.3
AM501482_188(AM501482|pid:none) Vaccinia virus Ankara strain cho...    33   8.3
AL356472_7(AL356472|pid:none) Human DNA sequence from clone RP11...    33   8.3
BC105563_1(BC105563|pid:none) Bos taurus chordin-like 2, mRNA (c...    33   8.3
AB168857_1(AB168857|pid:none) Macaca fascicularis testis cDNA, c...    33   8.3
DQ377945_180(DQ377945|pid:none) Vaccinia virus strain 3737, comp...    33   8.3
AK291643_1(AK291643|pid:none) Homo sapiens cDNA FLJ78663 complet...    33   8.3
AF332009_1(AF332009|pid:none) Homo sapiens nuclear transcription...    33   8.3
(A5D8T8) RecName: Full=C-type lectin domain family 18 member A; ...    33   8.3
(Q5TA82) RecName: Full=Late cornified envelope protein 2D; AltNa...    33   8.3
CR861410_1(CR861410|pid:none) Pongo abelii mRNA; cDNA DKFZp459M0...    33   8.3
(A6QLA0) RecName: Full=Transcriptional repressor NF-X1;         ...    33   8.3
(Q8NCF0) RecName: Full=C-type lectin domain family 18 member C; ...    33   8.3
AB385216_1(AB385216|pid:none) Synthetic construct DNA, clone: pF...    33   8.3
AM494959_6(AM494959|pid:none) Leishmania braziliensis chromosome...    33   8.3

>AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosome 2
            map 5836255-5862024 strain AX4, complete sequence.
          Length = 660

 Score =  312 bits (799), Expect = 7e-84
 Identities = 140/189 (74%), Positives = 143/189 (75%), Gaps = 7/189 (3%)
 Frame = +1

Query: 148  DPCKDVTCPDGFHCECKDGKXAKCVXXXXXXXXXXXXXXXXXXXXVNCPDGFYC------ 309
            D   D+ C  GF C+ +      CV                      CP G  C
Sbjct: 460  DEVCDLDCGRGFECKIRHDGSKCCVRSERPHPPQHEKCNK------RCPPGHECKVDQHG 513

Query: 310  -ECCVVAHRPPPKCSLRCPPRHECRVNHFGEECCVKVHHDKCSLRCPPGHECKVDQHGKE 486
             ECCVVAHRPPPKCSLRCPPRHECRVNHFGEECCVKVHHDKCSLRCPPGHECKVDQHGKE
Sbjct: 514  KECCVVAHRPPPKCSLRCPPRHECRVNHFGEECCVKVHHDKCSLRCPPGHECKVDQHGKE 573

Query: 487  CCVVAHRPPPKCSLRCPPKHECRINHFGEECCVKSRNDCLTCEDLNCERKGLHCAMKTVP 666
            CCVVAHRPPPKCSLRCPPKHECRINHFGEECCVKSRNDCLTCEDLNCERKGLHCAMKTVP
Sbjct: 574  CCVVAHRPPPKCSLRCPPKHECRINHFGEECCVKSRNDCLTCEDLNCERKGLHCAMKTVP 633

Query: 667  IDKENCCEK 693
            IDKENCCEK
Sbjct: 634  IDKENCCEK 642

 Score =  273 bits (698), Expect = 4e-72
 Identities = 133/242 (54%), Positives = 145/242 (59%), Gaps = 13/242 (5%)
 Frame = +1

Query: 1   STGTSGGHXXXXXXXXXXXGFHCECKDGKTAKCVXXXXXXXXXXXXXXXDPCKDVTCPDG 180
           STGTSGGH           GFHCECKDGKTAKCV               DPCKDVTCPDG
Sbjct: 248 STGTSGGHPDPCRDVDCPDGFHCECKDGKTAKCVPSPTTGSSSTSGGHPDPCKDVTCPDG 307

Query: 181 FHCECKDGKXAKCVXXXXXXXXXXXXXXXXXXXXVNCPDGFYCEC-------CVVAHRP- 336
           FHCECKDGK AKCV                    VNCPDGFYCEC       CV +
Sbjct: 308 FHCECKDGKTAKCVPSPTTGSSSTSGGNTNPCSNVNCPDGFYCECKDGKTAKCVPSGPTQ 367

Query: 337 ---PPKCSLRCPPRHECRVNHFGEECCVKVHHDKCSLRCPPGHECKVDQHGKECCVVAHR 507
              PP CSLRCPP HECR N  G +CCVKVHHD+CSLRCP GHECKVD +GKECCV +HR
Sbjct: 368 PPKPPVCSLRCPPNHECRFNDQGHQCCVKVHHDRCSLRCPHGHECKVDHNGKECCVRSHR 427

Query: 508 PPPK--CSLRCPPKHECRINHFGEECCVKSRNDCLTCEDLNCERKGLHCAMKTVPIDKEN 681
           PPP   CSLRCPPKHEC+ +  G++CCVK    C    DL+C R G  C ++    D
Sbjct: 428 PPPPEVCSLRCPPKHECKFDDHGKKCCVKIH--CDEVCDLDCGR-GFECKIRH---DGSK 481

Query: 682 CC 687
           CC
Sbjct: 482 CC 483

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,079,372,178
Number of extensions: 23885994
Number of successful extensions: 48156
Number of sequences better than 10.0: 213
Number of HSP's gapped: 47175
Number of HSP's successfully gapped: 293
Length of query: 231
Length of database: 1,051,180,864
Length adjustment: 124
Effective length of query: 107
Effective length of database: 649,847,548
Effective search space: 69533687636
Effective search space used: 69533687636
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
PSORT 

 psg: 0.75  gvh: 0.42  alm: 0.51  top: 0.53  tms: 0.00  mit: 0.14  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.50  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: cytoplasmic
	 28.0 %: nuclear
	 12.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  8.0 %: plasma membrane
	  4.0 %: endoplasmic reticulum
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U15301-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0