Contig-U15667-1
Contig ID Contig-U15667-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15667-1 (Contig-U15667-1Q) /CSM_Contig/Contig-U15667-1Q.Seq.d
TCGAAAGAGAATTTGAATGTTTTGGAAGGTTTTGTTTATCCATTCAATTT
TGTAATCAAACTAGTCAACAATGTGAATATGAACGTTGTACAAATACAAC
TTGCGTAACTCAACAACTTTGTCTTCAAAATAGTCCAACTTCACCAAAAC
TTTGTACTGGTACAAATATTATCCCAGTCATCGAAACTCCAAGATCAAAT
CCACCACAATCAGATCCATTCTTTGATAATAATAATAATAATAATAATAA
TAATAATAATAATAATAATAATAATAATAATAATAATAATAATGAAAATC
AACGTGTTTTCTATGGGTTAGTACACCAATTTGAATCAAGTGATCCAACA
TGGTCACAAGTTCATCATTGGTTTGAAATTTATGAAAAACAAAAACAATA
TAACTCGGTTAAAGAGAAATTGAAATCAATTTTCTATGGGCCAGGTTGGA
AAAAAGGTGATACCAATAGAATGGGTGATTTATCAAGTATTCCAATACCA
ACTGAAAAAGATGACCAATTACGAATTAAAGCATCATTATCAACATCATT
AAATATTTATTTGTTTATTCATTATTTTTTAGCATCATTTTTAGCATTGT
CATTACGTTCACTATTTGAGGATAAAATTGGATCTGCAAATGTAACTTGT
TCTTTTATTTTCGTATATTTCGGTTTAACTTCATTTGGTGCAATCTTTGA
TAGAAAATGGTATGCAATGATATTAGAACATTTTAGATTATGGTCTTTCA
TTCTATACACTCTGTACTTAGAATCAACCAATCCAATCATATCTCAACAA
TTTCAAATCATCTCACTATTAAGATACATTTATTTCGTATCTTCATTATT
TTTAATTTTAAAGAAATTATCACCTTTATCAATTCTATCAAATTATTTAA
AATCTTCAAAGAAATTATTAAATAAT----------TGATGTGATTGACT
TCTTGGTGGACTTGACCTCAAACCATAAGAATGAATAAGAGANCTTTGCA
AATGACAATTTCAATCTACGATGATTTCATGGACTATATCGTTGGCGATG
TTAAACCAGAGAAATTTGAAGAGGTTGATGTCATGCAATTGGTGGCTGTC
TCTAGTNTAAGTATCGCTTCTAAACTTGAAGAATTGGAAGAATATCAACC
ATCAATTAGGGAATTAAACTATTCAACTAATAATTCCTATACCCATGATG
GAATCGTTAAAACGGAAATGGGAATCTTATCAATTTTAAAATATAAAGTA
ATGTATCCAACTCCATCTCATTTCTTGGATTATCTACTTTTAATTACAAT
TCAACCATACGATTTTTTTGATGCTACCAAAGACTCCCAAATTACATTTG
CAAATCAATTTAAATTAATTAATGACCAAATTTTAAATATTTCTTATAAA
AATTTGAAATATAGACAATATTTACCTTCAATTAGTAGCATGTGCATCAA
TTGCTTCAACTAGAACTATAATGGGTATTGAACCAGCATGGAAACCATCT
TTAAGAAAA

Gap gap included
Contig length 1499
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 7
Number of EST 8
Link to clone list U15667
List of clone(s)

est1=SLB419Z,1,376
est2=VSI730Z,43,613
est3=SLD463E,54,404
est4=AFO509F,95,352
est5=VSC414Z,141,741
est6=AFO610Z,213,914
est7=SFI659Z,215,926
est8=AFO509Z,927,1499
Translated Amino Acid sequence
EREFECFGRFCLSIQFCNQTSQQCEYERCTNTTCVTQQLCLQNSPTSPKLCTGTNIIPVI
ETPRSNPPQSDPFFDNNNNNNNNNNNNNNNNNNNNNNENQRVFYGLVHQFESSDPTWSQV
HHWFEIYEKQKQYNSVKEKLKSIFYGPGWKKGDTNRMGDLSSIPIPTEKDDQLRIKASLS
TSLNIYLFIHYFLASFLALSLRSLFEDKIGSANVTCSFIFVYFGLTSFGAIFDRKWYAMI
LEHFRLWSFILYTLYLESTNPIISQQFQIISLLRYIYFVSSLFLILKKLSPLSILSNYLK
SSKKLLNN---

---DVIDFLVDLTSNHKNE*exfandnfnlr*fhglyrwrc*trei*rg*chaiggcl*x
kyrf*t*rigristin*giklfn**flyp*wnr*ngngnlinfki*snvsnsisflglst
fnynstirff*cyqrlpnyicksi*in**pnfkyfl*kfei*tiftfn**hvhqllqlel
*wvlnqhgnhl*e


Translated Amino Acid sequence (All Frames)
Frame A:
skenlnvlegfvypfnfviklvnnvnmnvvqiqla*lnnfvfkivqlhqnfvlvqilsqs
sklqdqihhnqihsliiiiiiiiiiiiiiiiiiiiiimkinvfsmg*ytnlnqviqhghk
fiiglkfmknknnitrlkrn*nqfsmgqvgkkvipiewviyqvfqyqlkkmtnyelkhhy
qhh*ificlfiif*hhf*hchyvhylrikldlqm*lvllfsyisv*lhlvqsliengmq*
y*nildyglsfytlct*nqpiqsylnnfksshy*dtfisylhyf*f*rnyhlyqfyqii*
nlqrny*i---

---*cd*llggldlkp*e*irxlck*qfqstmiswtislamlnqrnlkrlmscnwwlslv
*vsllnlknwkninhqlgn*tiqliipipmmeslkrkwesyqf*nik*ciqlhliswiiy
f*lqfnhtiflmlpktpklhlqinln*lmtkf*ifliki*nidniylqlvacasiastrt
imgiepawkpslrk

Frame B:
rkri*mfwkvlfihsil*sn*stm*i*tlykynlrnsttlssk*snftktlywykyypsh
rnskiksttirsil************************kstcflwvstpi*ik*snmvts
sslv*nl*ktkti*lg*reieinflwarlekr*yq*ng*fikysntn*kr*pitn*siii
niikylfvyslffsiifsivitfti*g*nwickcnlffyfrifrfnfiwcnl**kmvcnd
irtf*imvfhsihsvlrinqsnhistisnhltikihlfrifiifnfkeiitfinsiklfk
ifkeiik*---

---DVIDFLVDLTSNHKNE*exfandnfnlr*fhglyrwrc*trei*rg*chaiggcl*x
kyrf*t*rigristin*giklfn**flyp*wnr*ngngnlinfki*snvsnsisflglst
fnynstirff*cyqrlpnyicksi*in**pnfkyfl*kfei*tiftfn**hvhqllqlel
*wvlnqhgnhl*e

Frame C:
EREFECFGRFCLSIQFCNQTSQQCEYERCTNTTCVTQQLCLQNSPTSPKLCTGTNIIPVI
ETPRSNPPQSDPFFDNNNNNNNNNNNNNNNNNNNNNNENQRVFYGLVHQFESSDPTWSQV
HHWFEIYEKQKQYNSVKEKLKSIFYGPGWKKGDTNRMGDLSSIPIPTEKDDQLRIKASLS
TSLNIYLFIHYFLASFLALSLRSLFEDKIGSANVTCSFIFVYFGLTSFGAIFDRKWYAMI
LEHFRLWSFILYTLYLESTNPIISQQFQIISLLRYIYFVSSLFLILKKLSPLSILSNYLK
SSKKLLNN---

---m*ltswwt*pqtirmnkrxlqmtisiyddfmdyivgdvkpekfeevdvmqlvavssx
siaskleeleeyqpsirelnystnnsythdgivktemgilsilkykvmyptpshfldyll
litiqpydffdatkdsqitfanqfklindqilnisyknlkyrqylpsissmcincfn*ny
ngy*tsmetifkk

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15667-1 (Contig-U15667-1Q)
/CSM_Contig/Contig-U15667-1Q.Seq.d
(1509 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15667-1 (Contig-U15667-1Q) /CSM_Contig/Conti... 1679 0.0
Contig-U08746-1 (Contig-U08746-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U13957-1 (Contig-U13957-1Q) /CSM_Contig/Conti... 40 0.010
Contig-U16019-1 (Contig-U16019-1Q) /CSM_Contig/Conti... 38 0.039
Contig-U09142-1 (Contig-U09142-1Q) /CSM_Contig/Conti... 38 0.039
Contig-U15744-1 (Contig-U15744-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U15304-1 (Contig-U15304-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U15231-1 (Contig-U15231-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U13250-1 (Contig-U13250-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U12990-1 (Contig-U12990-1Q) /CSM_Contig/Conti... 36 0.15

>Contig-U15667-1 (Contig-U15667-1Q) /CSM_Contig/Contig-U15667-1Q.Seq.d
Length = 1509

Score = 1679 bits (847), Expect = 0.0
Identities = 897/904 (99%)
Strand = Plus / Plus


Query: 606 cgttcactatttgaggataaaattggatctgcaaatgtaacttgttcttttattttcgta 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 cgttcactatttgaggataaaattggatctgcaaatgtaacttgttcttttattttcgta 665


Query: 666 tatttcggtttaacttcatttggtgcaatctttgatagaaaatggtatgcaatgatatta 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tatttcggtttaacttcatttggtgcaatctttgatagaaaatggtatgcaatgatatta 725


Query: 726 gaacattttagattatggtctttcattctatacactctgtacttagaatcaaccaatcca 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gaacattttagattatggtctttcattctatacactctgtacttagaatcaaccaatcca 785


Query: 786 atcatatctcaacaatttcaaatcatctcactattaagatacatttatttcgtatcttca 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 atcatatctcaacaatttcaaatcatctcactattaagatacatttatttcgtatcttca 845


Query: 846 ttatttttaattttaaagaaattatcacctttatcaattctatcaaattatttaaaatct 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 ttatttttaattttaaagaaattatcacctttatcaattctatcaaattatttaaaatct 905


Query: 906 tcaaagaaattattaaataatnnnnnnnnnntgatgtgattgacttcttggtggacttga 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 tcaaagaaattattaaataatnnnnnnnnnntgatgtgattgacttcttggtggacttga 965


Query: 966 cctcaaaccataagaatgaataagaganctttgcaaatgacaatttcaatctacgatgat 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 cctcaaaccataagaatgaataagaganctttgcaaatgacaatttcaatctacgatgat 1025


Query: 1026 ttcatggactatatcgttggcgatgttaaaccagagaaatttgaagaggttgatgtcatg 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 ttcatggactatatcgttggcgatgttaaaccagagaaatttgaagaggttgatgtcatg 1085


Query: 1086 caattggtggctgtctctagtntaagtatcgcttctaaacttgaagaattggaagaatat 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 caattggtggctgtctctagtntaagtatcgcttctaaacttgaagaattggaagaatat 1145


Query: 1146 caaccatcaattagggaattaaactattcaactaataattcctatacccatgatggaatc 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 caaccatcaattagggaattaaactattcaactaataattcctatacccatgatggaatc 1205


Query: 1206 gttaaaacggaaatgggaatcttatcaattttaaaatataaagtaatgtatccaactcca 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 gttaaaacggaaatgggaatcttatcaattttaaaatataaagtaatgtatccaactcca 1265


Query: 1266 tctcatttcttggattatctacttttaattacaattcaaccatacgannnnnnngatgct 1325
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1266 tctcatttcttggattatctacttttaattacaattcaaccatacgatttttttgatgct 1325


Query: 1326 accaaagactcccaaattacatttgcaaatcaatttaaattaattaatgaccaaatttta 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 accaaagactcccaaattacatttgcaaatcaatttaaattaattaatgaccaaatttta 1385


Query: 1386 aatatttcttataaaaatttgaaatatagacaatatttaccttcaattagtagcatgtgc 1445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1386 aatatttcttataaaaatttgaaatatagacaatatttaccttcaattagtagcatgtgc 1445


Query: 1446 atcaattgcttcaactagaactataatgggtattgaaccagcatggaaaccatctttaag 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1446 atcaattgcttcaactagaactataatgggtattgaaccagcatggaaaccatctttaag 1505


Query: 1506 aaaa 1509
||||
Sbjct: 1506 aaaa 1509


Score = 498 bits (251), Expect = e-140
Identities = 251/251 (100%)
Strand = Plus / Plus


Query: 294 gaaaatcaacgtgttttctatgggttagtacaccaatttgaatcaagtgatccaacatgg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gaaaatcaacgtgttttctatgggttagtacaccaatttgaatcaagtgatccaacatgg 353


Query: 354 tcacaagttcatcattggtttgaaatttatgaaaaacaaaaacaatataactcggttaaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tcacaagttcatcattggtttgaaatttatgaaaaacaaaaacaatataactcggttaaa 413


Query: 414 gagaaattgaaatcaattttctatgggccaggttggaaaaaaggtgataccaatagaatg 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gagaaattgaaatcaattttctatgggccaggttggaaaaaaggtgataccaatagaatg 473


Query: 474 ggtgatttatcaagtattccaataccaactgaaaaagatgaccaattacgaattaaagca 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ggtgatttatcaagtattccaataccaactgaaaaagatgaccaattacgaattaaagca 533


Query: 534 tcattatcaac 544
|||||||||||
Sbjct: 534 tcattatcaac 544


Score = 446 bits (225), Expect = e-125
Identities = 225/225 (100%)
Strand = Plus / Plus


Query: 1 tcgaaagagaatttgaatgttttggaaggttttgtttatccattcaattttgtaatcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgaaagagaatttgaatgttttggaaggttttgtttatccattcaattttgtaatcaaa 60


Query: 61 ctagtcaacaatgtgaatatgaacgttgtacaaatacaacttgcgtaactcaacaacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctagtcaacaatgtgaatatgaacgttgtacaaatacaacttgcgtaactcaacaacttt 120


Query: 121 gtcttcaaaatagtccaacttcaccaaaactttgtactggtacaaatattatcccagtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcttcaaaatagtccaacttcaccaaaactttgtactggtacaaatattatcccagtca 180


Query: 181 tcgaaactccaagatcaaatccaccacaatcagatccattctttg 225
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgaaactccaagatcaaatccaccacaatcagatccattctttg 225


>Contig-U08746-1 (Contig-U08746-1Q) /CSM_Contig/Contig-U08746-1Q.Seq.d
Length = 935

Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1228 tatcaattttaaaatataaag 1248
|||||||||||||||||||||
Sbjct: 758 tatcaattttaaaatataaag 778


>Contig-U13957-1 (Contig-U13957-1Q) /CSM_Contig/Contig-U13957-1Q.Seq.d
Length = 1220

Score = 40.1 bits (20), Expect = 0.010
Identities = 20/20 (100%)
Strand = Plus / Minus


Query: 849 tttttaattttaaagaaatt 868
||||||||||||||||||||
Sbjct: 492 tttttaattttaaagaaatt 473


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 33,427
Number of Sequences: 8402
Number of extensions: 33427
Number of successful extensions: 4141
Number of sequences better than 10.0: 484
length of query: 1509
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1493
effective length of database: 7,941,110
effective search space: 11856077230
effective search space used: 11856077230
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 2. 5
Homology vs DNA
Query= Contig-U15667-1 (Contig-U15667-1Q) /CSM_Contig/Contig-U15667-1Q.Seq.d
(1509 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ402879) Dictyostelium discoideum cDNA clone:dds18e16, 3' ... 636 0.0 2
(AC115588) Dictyostelium discoideum chromosome 2 map complem... 636 0.0 3
(BJ346150) Dictyostelium discoideum cDNA clone:dda30c04, 3' ... 571 0.0 3
(BJ346139) Dictyostelium discoideum cDNA clone:dda30a03, 3' ... 733 0.0 3
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 666 0.0 13
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 430 e-116 1
(AU033770) Dictyostelium discoideum slug cDNA, clone SLB419. 430 e-116 1
(AU052521) Dictyostelium discoideum slug cDNA, clone SLD463. 325 3e-84 1
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 54 0.016 1
(EJ571130) 1092960042359 Global-Ocean-Sampling_GS-29-01-01-1... 38 0.049 2
(EJ550654) 1092959439874 Global-Ocean-Sampling_GS-29-01-01-1... 38 0.050 2
(AE014827) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 0.19 12
(AC166836) Mus musculus BAC clone RP23-17O23 from chromosome... 50 0.25 1
(AC093468) Mus musculus chromosome 10 clone RP23-17O23 map 1... 50 0.25 1
(CU468094) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.25 1
(AC217458) Cavia porcellus clone CH234-523C1, WORKING DRAFT ... 50 0.25 1
(CK379737) lai73g09.y1 Gastric Epithelial Progenitor 2 Mus m... 50 0.25 1
(EJ255799) 1095349009520 Global-Ocean-Sampling_GS-27-01-01-1... 42 0.34 2
(AM457982) Vitis vinifera contig VV78X114372.5, whole genome... 36 0.86 5
(AC224227) Bos taurus clone CH240-445P12, WORKING DRAFT SEQU... 48 0.97 1
(AC178164) Strongylocentrotus purpuratus clone R3-3081J11, W... 48 0.97 1
(ER341756) 1092344350083 Global-Ocean-Sampling_GS-34-01-01-1... 42 1.1 2
(CE467134) tigr-gss-dog-17000363588470 Dog Library Canis lup... 38 1.1 2
(AC139720) Homo sapiens BAC clone RP11-223C24 from 4, comple... 38 1.2 7
(ER437121) 1092963800111 Global-Ocean-Sampling_GS-35-01-01-1... 38 1.3 2
(ER513513) 1093015473619 Global-Ocean-Sampling_GS-35-01-01-1... 38 1.5 2
(EK164720) 1095458046537 Global-Ocean-Sampling_GS-31-01-01-1... 34 1.9 3
(Z82216) Human DNA sequence from clone RP1-75N13 on chromoso... 34 2.0 7
(EJ916590) 1093018563828 Global-Ocean-Sampling_GS-30-02-01-1... 34 2.5 3
(AZ538037) ENTGN71TF Entamoeba histolytica Sheared DNA Entam... 34 2.6 2
(EK419710) 1095515496455 Global-Ocean-Sampling_GS-31-01-01-1... 36 2.6 2
(GD268440) USDA-FP_200194 Asian citrus psyllid testes (Hemip... 36 2.6 2
(BX664724) Human DNA sequence from clone RP11-259A5 on chrom... 38 3.1 8
(AC167957) Medicago truncatula clone mth2-106h7, complete se... 38 3.3 6
(EJ825963) 1093017560440 Global-Ocean-Sampling_GS-30-02-01-1... 34 3.5 3
(AL929123) Mouse DNA sequence from clone RP23-328K3 on chrom... 46 3.8 1
(AL772231) Mouse DNA sequence from clone RP23-398O7 on chrom... 46 3.8 1
(AC209228) Populus trichocarpa clone POP075-L19, complete se... 46 3.8 1
(AC140544) Medicago truncatula clone mth2-17g16, complete se... 46 3.8 1
(AC140033) Medicago truncatula clone mth2-24f11, complete se... 46 3.8 1
(AC230230) Bos taurus clone CH240-518B4, WORKING DRAFT SEQUE... 46 3.8 1
(AC181628) Strongylocentrotus purpuratus clone R3-1105C18, W... 46 3.8 1
(AC181087) Strongylocentrotus purpuratus clone R3-3029F24, W... 46 3.8 1
(AC181025) Strongylocentrotus purpuratus clone R3-3050M6, WO... 46 3.8 1
(AC180970) Strongylocentrotus purpuratus clone R3-3059B02, W... 46 3.8 1
(AC177782) Strongylocentrotus purpuratus clone R3-1002J13, W... 46 3.8 1
(AC176836) Strongylocentrotus purpuratus clone R3-3112D11, W... 46 3.8 1
(AC176412) Strongylocentrotus purpuratus clone R3-12J16, WOR... 46 3.8 1
(AC175945) Strongylocentrotus purpuratus clone R3-17C11, WOR... 46 3.8 1
(AC168758) Strongylocentrotus purpuratus clone R3-3004I8, WO... 46 3.8 1
(BH422771) BOGLM35TF BOGL Brassica oleracea genomic clone BO... 46 3.8 1
(BH130843) ENTOV63TR Entamoeba histolytica Sheared DNA Entam... 46 3.8 1
(CU031150) Equus caballus GSS, BAC clone CH241-124F5, SP6 en... 46 3.8 1
(CT866561) Equus caballus GSS, BAC clone CH241-16A18, T7 end... 46 3.8 1
(CC559072) CH240_468A11.T7 CHORI-240 Bos taurus genomic clon... 46 3.8 1
(DQ068067) Uncultured bacterium BAC13K9BAC, complete sequence. 46 3.8 1
(FE122890) LV_HC_RA076M20f Litopenaeus vannamei hemocyte cDN... 44 4.3 2
(FE122889) LV_HC_RA076K20r Litopenaeus vannamei hemocyte cDN... 44 4.3 2
(FE118541) LV_HC_RA068J23f Litopenaeus vannamei hemocyte cDN... 44 4.4 2
(FE121980) LV_HC_RA074F14f Litopenaeus vannamei hemocyte cDN... 44 4.7 2
(FE121979) LV_HC_RA074D14r Litopenaeus vannamei hemocyte cDN... 44 4.7 2
(AC187478) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 36 5.0 7
(AC024808) Caenorhabditis elegans cosmid Y53G8AM, complete s... 40 6.4 5
(AC142243) Mus musculus clone RP23-77B24, WORKING DRAFT SEQU... 42 6.9 3
(AP004366) Oryza sativa Japonica Group genomic DNA, chromoso... 34 7.0 2
(AP003271) Oryza sativa Japonica Group genomic DNA, chromoso... 34 7.1 2
(AF005370) Alcelaphine herpesvirus 1 L-DNA, complete sequence. 34 7.2 2
(AC137886) Mus musculus clone RP23-161A7, LOW-PASS SEQUENCE ... 34 7.6 2
(CU852860) A BAC library has been constructed from PN40024 g... 34 7.7 3
(AC073914) Homo sapiens chromosome 12 clone RP11-587A8, WORK... 40 8.0 7
(EA692006) Sequence 70885 from patent US 7365185. 34 8.0 2
(CZ940807) 322692 Tomato EcoRI BAC Library Solanum lycopersi... 34 9.4 2
(DT780309) 125593141 TH1 Tribolium castaneum cDNA clone 68E5... 34 9.4 2
(ER514833) 1093015489816 Global-Ocean-Sampling_GS-35-01-01-1... 34 9.5 2
(EJ974732) 1093022108532 Global-Ocean-Sampling_GS-30-02-01-1... 32 9.5 2
(CT505856) A BAC library has been constructed from cultivar ... 34 9.6 3
(CW684554) OG_BBa0042E20.f OG_BBa Oryza glaberrima genomic c... 34 9.6 2
(DU341729) 1098313045806 CHORI-243 Ovis aries genomic clone ... 34 9.9 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 34 9.9 12

>(BJ402879) Dictyostelium discoideum cDNA clone:dds18e16, 3' end,
single read.
Length = 712

Score = 636 bits (321), Expect(2) = 0.0
Identities = 321/321 (100%)
Strand = Plus / Minus


Query: 606 cgttcactatttgaggataaaattggatctgcaaatgtaacttgttcttttattttcgta 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgttcactatttgaggataaaattggatctgcaaatgtaacttgttcttttattttcgta 262


Query: 666 tatttcggtttaacttcatttggtgcaatctttgatagaaaatggtatgcaatgatatta 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttcggtttaacttcatttggtgcaatctttgatagaaaatggtatgcaatgatatta 202


Query: 726 gaacattttagattatggtctttcattctatacactctgtacttagaatcaaccaatcca 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaacattttagattatggtctttcattctatacactctgtacttagaatcaaccaatcca 142


Query: 786 atcatatctcaacaatttcaaatcatctcactattaagatacatttatttcgtatcttca 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 atcatatctcaacaatttcaaatcatctcactattaagatacatttatttcgtatcttca 82


Query: 846 ttatttttaattttaaagaaattatcacctttatcaattctatcaaattatttaaaatct 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ttatttttaattttaaagaaattatcacctttatcaattctatcaaattatttaaaatct 22


Query: 906 tcaaagaaattattaaataat 926
|||||||||||||||||||||
Sbjct: 21 tcaaagaaattattaaataat 1

Score = 472 bits (238), Expect(2) = 0.0
Identities = 238/238 (100%)
Strand = Plus / Minus


Query: 294 gaaaatcaacgtgttttctatgggttagtacaccaatttgaatcaagtgatccaacatgg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gaaaatcaacgtgttttctatgggttagtacaccaatttgaatcaagtgatccaacatgg 574


Query: 354 tcacaagttcatcattggtttgaaatttatgaaaaacaaaaacaatataactcggttaaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tcacaagttcatcattggtttgaaatttatgaaaaacaaaaacaatataactcggttaaa 514


Query: 414 gagaaattgaaatcaattttctatgggccaggttggaaaaaaggtgataccaatagaatg 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gagaaattgaaatcaattttctatgggccaggttggaaaaaaggtgataccaatagaatg 454


Query: 474 ggtgatttatcaagtattccaataccaactgaaaaagatgaccaattacgaattaaag 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ggtgatttatcaagtattccaataccaactgaaaaagatgaccaattacgaattaaag 396

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,637,569,693
Number of extensions: 105672441
Number of successful extensions: 9667213
Number of sequences better than 10.0: 82
Length of query: 1509
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1485
Effective length of database: 96,409,374,237
Effective search space: 143167920741945
Effective search space used: 143167920741945
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15667-1 (Contig-U15667-1Q) /CSM_Contig/Contig-U15667-1Q.Seq.d
(1509 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC117081_31(AC117081|pid:none) Dictyostelium discoideum chromoso... 302 6e-91
AC115588_5(AC115588|pid:none) Dictyostelium discoideum chromosom... 323 8e-87
AC117076_49(AC117076|pid:none) Dictyostelium discoideum chromoso... 163 2e-38
AC117076_50(AC117076|pid:none) Dictyostelium discoideum chromoso... 76 4e-12
BC080202_1(BC080202|pid:none) Mus musculus cyclin B1, mRNA (cDNA... 61 9e-08
I48316(I48316) cyclin B1 - mouse &X64713_1(X64713|pid:none) 61 9e-08
(P30277) RecName: Full=G2/mitotic-specific cyclin-B1; &BC059113... 61 1e-07
AY618995_1(AY618995|pid:none) Gonyaulax polyedra mitotic cyclin ... 60 2e-07
JH0509(JH0509;S14652) cyclin B - mouse &X58708_1(X58708|pid:none) 60 3e-07
BC168416_1(BC168416|pid:none) Xenopus tropicalis cyclin J, mRNA ... 53 4e-07
(Q6ZNB7) RecName: Full=Transmembrane protein 195; &AK131284_1(A... 59 6e-07
(Q6DFJ9) RecName: Full=Cyclin-J; &BC076737_1(BC076737|pid:none) 52 9e-07
AK289431_1(AK289431|pid:none) Homo sapiens cDNA FLJ75563 complet... 57 1e-06
AY889745_1(AY889745|pid:none) Synthetic construct Homo sapiens c... 57 1e-06
(P14635) RecName: Full=G2/mitotic-specific cyclin-B1; &A32992(A... 57 1e-06
BT020128_1(BT020128|pid:none) Homo sapiens cyclin B1 mRNA, compl... 57 1e-06
AK297264_1(AK297264|pid:none) Homo sapiens cDNA FLJ58102 complet... 49 2e-06
BT080401_1(BT080401|pid:none) Caligus clemensi clone ccle-evs-50... 56 3e-06
(Q1LZG6) RecName: Full=G2/mitotic-specific cyclin-B1; &BC116011... 56 3e-06
(Q3TZI6) RecName: Full=Cyclin-J; &AK052506_1(AK052506|pid:none)... 49 4e-06
(P47829) RecName: Full=G2/mitotic-specific cyclin CYB1; &U40430... 55 5e-06
AK157841_1(AK157841|pid:none) Mus musculus erythroblast cDNA, RI... 48 5e-06
BC071014_1(BC071014|pid:none) Xenopus laevis cyclin B4, mRNA (cD... 55 7e-06
AK294000_1(AK294000|pid:none) Homo sapiens cDNA FLJ53725 complet... 55 9e-06
BC158316_1(BC158316|pid:none) Xenopus tropicalis cDNA clone MGC:... 55 9e-06
BT055466_1(BT055466|pid:none) Zea mays full-length cDNA clone ZM... 54 1e-05
(P24869) RecName: Full=G2/mitotic-specific cyclin-2; &M65070_1(... 54 1e-05
AB332237_1(AB332237|pid:none) Sus scrofa CCNB2 mRNA for cyclin B... 54 1e-05
CR760967_1(CR760967|pid:none) Xenopus tropicalis finished cDNA, ... 54 2e-05
BC080491_1(BC080491|pid:none) Xenopus tropicalis cDNA clone MGC:... 54 2e-05
JC4828(JC4828)cyclin B - yeast (Candida albicans) 53 3e-05
(P13351) RecName: Full=G2/mitotic-specific cyclin-B2; &B32370(B... 53 3e-05
AL360314_19(AL360314|pid:none) Arabidopsis thaliana DNA chromoso... 53 3e-05
AB005252_1(AB005252|pid:none) Rana japonica mRNA for cyclin B1, ... 53 3e-05
BC060466_1(BC060466|pid:none) Xenopus laevis hypothetical protei... 53 3e-05
AB005790_1(AB005790|pid:none) Cynops pyrrhogaster mRNA for cycli... 52 4e-05
BC084929_1(BC084929|pid:none) Xenopus laevis hypothetical LOC495... 52 4e-05
A96513(A96513) probable cyclin, 23571-21736 [imported] - Arabido... 52 4e-05
BT019458_1(BT019458|pid:none) Homo sapiens cyclin B2 mRNA, compl... 52 4e-05
AY816084_1(AY816084|pid:none) Schistosoma japonicum SJCHGC02339 ... 52 4e-05
(O95067) RecName: Full=G2/mitotic-specific cyclin-B2; &AB020981... 52 4e-05
AY891142_1(AY891142|pid:none) Synthetic construct Homo sapiens c... 52 4e-05
(Q9DG96) RecName: Full=G2/mitotic-specific cyclin-B2; &AB050467... 52 6e-05
(P13350) RecName: Full=G2/mitotic-specific cyclin-B1; &A32370(A... 52 6e-05
(P24871) RecName: Full=G2/mitotic-specific cyclin-4; &B60048(B6... 52 6e-05
CR761225_1(CR761225|pid:none) Xenopus tropicalis finished cDNA, ... 52 6e-05
(Q9Z238) RecName: Full=G1/S-specific cyclin-E2; &AF091432_1(AF0... 52 6e-05
(O77689) RecName: Full=G2/mitotic-specific cyclin-B2; &BT021153... 52 7e-05
(Q60FX9) RecName: Full=G2/mitotic-specific cyclin-B2; &AB183432... 52 7e-05
CR380959_479(CR380959|pid:none) Candida glabrata strain CBS138 c... 52 7e-05
(Q9DGA0) RecName: Full=G2/mitotic-specific cyclin-B1; &AB050463... 52 7e-05
BT020648_1(BT020648|pid:none) Bos taurus cyclin B2 (CCNB2), mRNA... 52 7e-05
EU939740_1(EU939740|pid:none) Saccoglossus kowalevskii cyclin B ... 52 7e-05
BC118382_1(BC118382|pid:none) Bos taurus cyclin B2, mRNA (cDNA c... 52 7e-05
AK076122_1(AK076122|pid:none) Mus musculus 10, 11 days embryo wh... 52 7e-05
(Q9DG97) RecName: Full=G2/mitotic-specific cyclin-B1; &AB050466... 52 7e-05
(P37883) RecName: Full=G2/mitotic-specific cyclin-B2; &D17294_1... 51 1e-04
BT037101_1(BT037101|pid:none) Zea mays full-length cDNA clone ZM... 51 1e-04
AK222611_1(AK222611|pid:none) Homo sapiens mRNA for cyclin B2 va... 51 1e-04
EF015589_1(EF015589|pid:none) Penaeus monodon cyclin B mRNA, com... 51 1e-04
D50737_1(D50737|pid:none) Nicotiana tabacum mRNA for B-type cycl... 51 1e-04
EU707334_1(EU707334|pid:none) Penaeus monodon cyclin B gene, com... 51 1e-04
EU707330_1(EU707330|pid:none) Penaeus monodon cyclin B mRNA, com... 51 1e-04
AK011883_1(AK011883|pid:none) Mus musculus 10 days embryo whole ... 51 1e-04
D86385_1(D86385|pid:none) Catharanthus roseus mRNA for A-type cy... 51 1e-04
AE016817_468(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 51 1e-04
AF097334_1(AF097334|pid:none) Pneumocystis carinii cell division... 51 1e-04
AJ719410_1(AJ719410|pid:none) Gallus gallus mRNA for hypothetica... 51 1e-04
EF123071_1(EF123071|pid:none) Ambystoma mexicanum cyclin B1 mRNA... 51 1e-04
(Q0DJR9) RecName: Full=Cyclin-A1-4; AltName: Full=G2/mitotic-spe... 51 1e-04
FJ705251_1(FJ705251|pid:none) Scylla paramamosain cyclin B mRNA,... 51 1e-04
CR382124_646(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 51 1e-04
AJ496539_1(AJ496539|pid:none) Trypanosoma brucei CYC6 gene for c... 51 1e-04
BC053727_1(BC053727|pid:none) Mus musculus cyclin E2, mRNA (cDNA... 51 1e-04
(Q75I54) RecName: Full=Cyclin-A3-1; AltName: Full=G2/mitotic-spe... 51 1e-04
AJ496540_1(AJ496540|pid:none) Trypanosoma brucei CYC6 gene for c... 51 1e-04
AY157031_1(AY157031|pid:none) Trypanosoma brucei putative mitoti... 51 1e-04
AP008211_618(AP008211|pid:none) Oryza sativa (japonica cultivar-... 51 1e-04
AM851052_1(AM851052|pid:none) Astropecten aranciacus mRNA for cy... 51 1e-04
(Q9DGA3) RecName: Full=G2/mitotic-specific cyclin-B2; &AB050460... 50 2e-04
AF363964_1(AF363964|pid:none) Rana dybowskii cyclin B1 mRNA, com... 50 2e-04
(Q9IBG0) RecName: Full=G2/mitotic-specific cyclin-B2; &AB030070... 50 2e-04
(P07818) RecName: Full=G2/mitotic-specific cyclin-B; &S00662(S0... 50 2e-04
FJ228727_1(FJ228727|pid:none) Fenneropenaeus penicillatus cyclin... 50 2e-04
D89723_1(D89723|pid:none) Asterina pectinifera mRNA for cyclin A... 50 2e-04
T02964(T02964) cyclin A-type (clone 13) - common tobacco (fragme... 50 2e-04
(P30276) RecName: Full=G2/mitotic-specific cyclin-B2; &S21529(I... 50 2e-04
CR380956_375(CR380956|pid:none) Candida glabrata strain CBS138 c... 50 2e-04
(O96020) RecName: Full=G1/S-specific cyclin-E2; &AF091433_1(AF0... 50 2e-04
(P10815) RecName: Full=G2/mitotic-specific cyclin cdc13; &AL096... 50 3e-04
(Q5E9K7) RecName: Full=G1/S-specific cyclin-E2; &BT020913_1(BT0... 50 3e-04
L48205_1(L48205|pid:none) Sus scrofa (clone CYC511) cyclin B mRN... 50 3e-04
AE016814_285(AE016814|pid:none) Ashbya gossypii (= Eremothecium ... 50 3e-04
FJ228728_1(FJ228728|pid:none) Litopenaeus vannamei cyclin B mRNA... 50 3e-04
A34948(A34948)cyclin-related cell division control protein cdc13... 50 3e-04
AK013312_1(AK013312|pid:none) Mus musculus 10, 11 days embryo wh... 50 3e-04
(Q5M8F9) RecName: Full=Transmembrane protein 195; &BC088041_1(B... 50 3e-04
AM920436_191(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 50 3e-04
EU780732_1(EU780732|pid:none) Anabas testudineus cyclin B mRNA, ... 50 3e-04
AF086634_1(AF086634|pid:none) Dreissena polymorpha cyclin B mRNA... 49 4e-04
U00595_1(U00595|pid:none) Mustela vison cyclin A mRNA, partial c... 49 4e-04
AM454754_1(AM454754|pid:none) Vitis vinifera contig VV78X038194.... 49 4e-04
AB008364_1(AB008364|pid:none) Hemicentrotus pulcherrimus HpCycA ... 49 5e-04
AF205358_1(AF205358|pid:none) Strongylocentrotus purpuratus cycl... 49 5e-04
AY776171_1(AY776171|pid:none) Nicotiana tabacum cyclin B-like pr... 49 5e-04
(Q9DGA4) RecName: Full=G2/mitotic-specific cyclin-B1; &AB050459... 49 5e-04
AF273494_1(AF273494|pid:none) Carassius auratus gibelio cyclin B... 49 5e-04
AY675097_1(AY675097|pid:none) Ostreococcus tauri cyclin A (CycA)... 49 5e-04
AF080219_1(AF080219|pid:none) Bos taurus cyclin B2 (CYCB2) mRNA,... 49 5e-04
EU333814_1(EU333814|pid:none) Cyprinus carpio cyclin B gene, exo... 49 5e-04
AC013453_8(AC013453|pid:none) Arabidopsis thaliana chromosome I ... 49 5e-04
(Q38819) RecName: Full=Cyclin-A2-3; AltName: Full=G2/mitotic-spe... 49 5e-04
CU928175_252(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 49 5e-04
D50868_1(D50868|pid:none) Glycine max mRNA for mitotic cyclin a1... 49 5e-04
EU293851_1(EU293851|pid:none) Carassius auratus cyclin B mRNA, c... 49 6e-04
AF273495_1(AF273495|pid:none) Carassius auratus cyclin B mRNA, c... 49 6e-04
(Q5SCB5) RecName: Full=Cyclin-D; &AY675099_1(AY675099|pid:none) 49 6e-04
CR382124_645(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 49 6e-04
AJ634048_1(AJ634048|pid:none) Sphaerechinus granularis mRNA for ... 49 6e-04
CU928180_66(CU928180|pid:none) Kluyveromyces thermotolerans stra... 49 6e-04
AJ224985_1(AJ224985|pid:none) Sphaerechinus granularis mRNA for ... 49 6e-04
CU928169_214(CU928169|pid:none) Kluyveromyces thermotolerans str... 49 6e-04
(Q9FMH5) RecName: Full=Putative cyclin-A3-1; AltName: Full=G2/mi... 49 6e-04
AB040435_1(AB040435|pid:none) Danio rerio mRNA for cyclin B1, co... 49 6e-04
BC045492_1(BC045492|pid:none) Danio rerio cyclin B1, mRNA (cDNA ... 49 6e-04
BT046289_1(BT046289|pid:none) Salmo salar clone ssal-eve-503-094... 48 8e-04
DQ888229_1(DQ888229|pid:none) Oncorhynchus mykiss cyclin B1 mRNA... 48 8e-04
T02963(T02963) cyclin A-type (clone 105) - common tobacco &X929... 48 8e-04
EU293850_1(EU293850|pid:none) Carassius auratus x Cyprinus carpi... 48 8e-04
AF545832_1(AF545832|pid:none) Oncorhynchus mykiss clone tcba_002... 48 8e-04
(P24861) RecName: Full=G2/mitotic-specific cyclin-A; &S17792(S1... 48 0.001
EU970075_1(EU970075|pid:none) Zea mays clone 339439 unknown mRNA. 48 0.001
L27223_1(L27223|pid:none) Arabidopsis thaliana cyclin (cyc1bAt) ... 48 0.001
T02968(T02968) cyclin A-type (clone 59) - common tobacco &X9296... 48 0.001
AE010300_1405(AE010300|pid:none) Leptospira interrogans serovar ... 48 0.001
AF052484_1(AF052484|pid:none) Paramecium tetraurelia mitotic cyc... 48 0.001
S71192(S71192) mitosis-specific cyclin 2 - Arabidopsis thaliana ... 48 0.001
D89636_1(D89636|pid:none) Nicotiana tabacum mRNA for A-type cycl... 48 0.001
(P13952) RecName: Full=G2/mitotic-specific cyclin-B; &A30108(A3... 48 0.001
(A0MEB5) RecName: Full=Cyclin-A3-3; AltName: Full=G2/mitotic-spe... 48 0.001
AB102687_1(AB102687|pid:none) Silene latifolia SlCycA1 mRNA for ... 48 0.001
U87966_1(U87966|pid:none) Paramecium tetraurelia cyclin mRNA, pa... 48 0.001
AY769095_1(AY769095|pid:none) Marsupenaeus japonicus cyclin B mR... 48 0.001
AJ250315_1(AJ250315|pid:none) Petunia hybrida mRNA for CYCB1-1 p... 47 0.001
EU953214_1(EU953214|pid:none) Zea mays clone 1390716 cyclin-A2 m... 47 0.001
AJ133722_1(AJ133722|pid:none) Pisum sativum mRNA for cyclin A3. 47 0.001
CP001324_786(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 47 0.001
(Q60FY0) RecName: Full=G2/mitotic-specific cyclin-B1; &AB183431... 47 0.002
CU633867_109(CU633867|pid:none) Podospora anserina genomic DNA c... 47 0.002
CP000685_4303(CP000685|pid:none) Flavobacterium johnsoniae UW101... 47 0.002
EU622123_1(EU622123|pid:none) Eriocheir sinensis ovarian cyclin ... 47 0.002
CP001576_27(CP001576|pid:none) Micromonas sp. RCC299 chromosome ... 47 0.002
AF052487_1(AF052487|pid:none) Paramecium tetraurelia mitotic cyc... 47 0.002
CR548612_301(CR548612|pid:none) Paramecium tetraurelia macronucl... 47 0.002
AM270349_7(AM270349|pid:none) Aspergillus niger contig An15c0220... 47 0.002
DQ888230_1(DQ888230|pid:none) Oncorhynchus mykiss cyclin B2 mRNA... 47 0.002
AB005256_1(AB005256|pid:none) Bufo japonicus mRNA for cyclin B, ... 47 0.002
EU137108_1(EU137108|pid:none) Oryctolagus cuniculus cyclin A2 (C... 47 0.002
BT061343_1(BT061343|pid:none) Zea mays full-length cDNA clone ZM... 47 0.002
BC045937_1(BC045937|pid:none) Danio rerio cyclin B2, mRNA (cDNA ... 47 0.002
AC079341_3(AC079341|pid:none) Homo sapiens BAC clone RP11-63B13 ... 47 0.002
EU970376_1(EU970376|pid:none) Zea mays clone 343909 cyclin-A2 mR... 47 0.002
Z31402_1(Z31402|pid:none) A.thaliana (Columbia) cyc3b mRNA for c... 47 0.002
(Q39071) RecName: Full=Cyclin-A2-1; AltName: Full=G2/mitotic-spe... 47 0.002
EU953280_1(EU953280|pid:none) Zea mays clone 1396170 cyclin-A2 m... 47 0.002
CR761287_1(CR761287|pid:none) Xenopus tropicalis finished cDNA, ... 47 0.002
CR407692_1(CR407692|pid:none) Homo sapiens full open reading fra... 47 0.002
AE014296_705(AE014296|pid:none) Drosophila melanogaster chromoso... 47 0.002
AC158501_17(AC158501|pid:none) Medicago truncatula chromosome 2 ... 47 0.002
(Q7F830) RecName: Full=Cyclin-A1-1; AltName: Full=G2/mitotic-spe... 46 0.003
AJ304992_1(AJ304992|pid:none) Xenopus laevis mRNA for cyclin B5. 46 0.003
AY623028_1(AY623028|pid:none) Rattus norvegicus clone E6-B cycli... 46 0.003
Z26331_1(Z26331|pid:none) G.max gene for cyclin. 46 0.003
AY623027_1(AY623027|pid:none) Rattus norvegicus clone E6-A cycli... 46 0.003
(Q9C6A9) RecName: Full=Cyclin-A3-2; AltName: Full=G2/mitotic-spe... 46 0.003
(P25011) RecName: Full=G2/mitotic-specific cyclin S13-6; AltName... 46 0.003
AF273492_1(AF273492|pid:none) Carassius auratus gibelio cyclin A... 46 0.003
(P25009) RecName: Full=Cyclin puc1; &AL032684_32(AL032684|pid:n... 46 0.003
DQ054488_1(DQ054488|pid:none) Helobdella triserialis cyclin B mR... 46 0.003
(Q0JPA4) RecName: Full=Cyclin-A1-2; AltName: Full=G2/mitotic-spe... 46 0.003
Z31589_1(Z31589|pid:none) A.thaliana (Columbia) cyc3a gene for c... 46 0.003
AP002481_7(AP002481|pid:none) Oryza sativa Japonica Group genomi... 46 0.003
(P51987) RecName: Full=G2/mitotic-specific cyclin-B; &X90984_1(... 46 0.003
(P30274) RecName: Full=Cyclin-A2; Short=Cyclin-A; &BC1... 46 0.003
CR382123_712(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 46 0.003
(P51943) RecName: Full=Cyclin-A2; Short=Cyclin-A; &S37... 46 0.003
(P51986) RecName: Full=G2/mitotic-specific cyclin-A; Flags: Frag... 46 0.004
AB024987_1(AB024987|pid:none) Oryza sativa cycB2;os;1 mRNA for c... 46 0.004
D50869_1(D50869|pid:none) Glycine max mRNA for mitotic cyclin a2... 46 0.004
(P24868) RecName: Full=G2/mitotic-specific cyclin-1; &M62389_2(... 46 0.004
(P29332) RecName: Full=G2/mitotic-specific cyclin-B2; &S23596(S... 46 0.004
S49462(S49462) cyclin - rice &X82035_1(X82035|pid:none) 46 0.004
CR380955_142(CR380955|pid:none) Candida glabrata strain CBS138 c... 45 0.005
M24841_1(M24841|pid:none) D.melanogaster cyclin A mRNA, complete... 45 0.005
X69425_1(X69425|pid:none) S.cerevisiae CLB3 gene. 45 0.005
(Q8IV13) RecName: Full=Cyclin-J-like protein; &BC035871_1(BC035... 45 0.005
AF087910_1(AF087910|pid:none) Homo sapiens mitotic specific cycl... 45 0.005
AJ512968_1(AJ512968|pid:none) Marthasterias glacialis mRNA for C... 45 0.005
AL035605_12(AL035605|pid:none) Arabidopsis thaliana DNA chromoso... 45 0.005
D82349_1(D82349|pid:none) Adiantum capillus-veneris mRNA for cyc... 45 0.005
AE014296_2175(AE014296|pid:none) Drosophila melanogaster chromos... 45 0.005
(Q5T5M9) RecName: Full=Cyclin-J; &AL356155_4(AL356155|pid:none)... 45 0.005
BT001635_1(BT001635|pid:none) Drosophila melanogaster RE38818 fu... 45 0.005
AF273493_1(AF273493|pid:none) Carassius auratus cyclin A2 mRNA, ... 45 0.005
AK092360_1(AK092360|pid:none) Homo sapiens cDNA FLJ35041 fis, cl... 45 0.005
AF234784_1(AF234784|pid:none) Danio rerio cyclin A2 (CycA2) mRNA... 45 0.005
BC068323_1(BC068323|pid:none) Danio rerio cyclin A2, mRNA (cDNA ... 45 0.005
X70436_1(X70436|pid:none) S.cerevisiae (K1107) CLB6 gene. 45 0.007
AB456999_1(AB456999|pid:none) Bombyx mori BMcycA mRNA for cyclin... 45 0.007
AJ243454_1(AJ243454|pid:none) Lycopersicon esculentum partial mR... 45 0.007
S15406(S15406)cyclin puc1 - fission yeast (Schizosaccharomyces p... 45 0.007
D84452_1(D84452|pid:none) Silkworm mRNA for cyclin B homolog, co... 45 0.007
BT035026_1(BT035026|pid:none) Zea mays full-length cDNA clone ZM... 45 0.007
EU963376_1(EU963376|pid:none) Zea mays clone 261615 cyclin-A2 mR... 45 0.007
BT083599_1(BT083599|pid:none) Zea mays full-length cDNA clone ZM... 45 0.007
AF025907_1(AF025907|pid:none) Paramecium tetraurelia cyclin B2 m... 45 0.007
BT045412_1(BT045412|pid:none) Salmo salar clone ssal-rgf-520-270... 45 0.007
T02746(T02746) cyclin A-like protein CYCZM2W - maize &U50064_1(... 45 0.007
AY675098_1(AY675098|pid:none) Ostreococcus tauri cyclin B (CycB)... 45 0.007
T04104(T04104) B-type cyclin homolog - maize &U66607_1(U66607|p... 45 0.007
AF518250_1(AF518250|pid:none) Nicotiana tabacum cyclin A-like pr... 45 0.009
AK314261_1(AK314261|pid:none) Homo sapiens cDNA, FLJ95009, highl... 45 0.009
AB077360_1(AB077360|pid:none) Daucus carota DcCycB1-3 mRNA for C... 45 0.009
BT019576_1(BT019576|pid:none) Synthetic construct Homo sapiens c... 45 0.009
CU928178_482(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 45 0.009
(Q7XSJ6) RecName: Full=Cyclin-B2-1; AltName: Full=G2/mitotic-spe... 45 0.009
AY167737_1(AY167737|pid:none) Populus alba cyclin A mRNA, partia... 45 0.009
BC117559_1(BC117559|pid:none) Mus musculus cyclin J, mRNA (cDNA ... 45 0.009
AK301897_1(AK301897|pid:none) Homo sapiens cDNA FLJ50745 complet... 45 0.009
(Q9C6Y3) RecName: Full=Cyclin-A1-1; AltName: Full=G2/mitotic-spe... 45 0.009
(P25010) RecName: Full=G2/mitotic-specific cyclin C13-1; AltName... 45 0.009
AB179431_1(AB179431|pid:none) Macaca fascicularis testis cDNA cl... 45 0.009
AB462995_1(AB462995|pid:none) Synthetic construct DNA, clone: pF... 45 0.009
(Q01J96) RecName: Full=Cyclin-B2-1; AltName: Full=G2/mitotic-spe... 45 0.009
EU707329_1(EU707329|pid:none) Penaeus monodon cyclin A mRNA, com... 45 0.009
(P78396) RecName: Full=Cyclin-A1; &AL359767_1(AL359767|pid:none... 45 0.009
AY890528_1(AY890528|pid:none) Synthetic construct Homo sapiens c... 45 0.009
AL513442_9(AL513442|pid:none) Neurospora crassa DNA linkage grou... 45 0.009
AJ243451_1(AJ243451|pid:none) Lycopersicon esculentum mRNA for c... 45 0.009
BT081272_1(BT081272|pid:none) Caligus clemensi clone ccle-evs-51... 45 0.009
BT019577_1(BT019577|pid:none) Homo sapiens cyclin A1 mRNA, compl... 45 0.009
(P30284) RecName: Full=G2/mitotic-specific cyclin-B; &S22694(S2... 45 0.009
AX040982_1(AX040982|pid:none) Sequence 29 from Patent WO0065040.... 44 0.012
S71193(S71193) mitosis-specific cyclin 3c - Arabidopsis thaliana... 44 0.012
BC075562_1(BC075562|pid:none) Xenopus tropicalis cyclin A2, mRNA... 44 0.012
L34207_1(L34207|pid:none) Petroselinum crispum mitotic cyclin ge... 44 0.012
BT039382_1(BT039382|pid:none) Zea mays full-length cDNA clone ZM... 44 0.012
L25406_1(L25406|pid:none) Brassica napus cyclin mRNA, complete c... 44 0.012
AY340663_1(AY340663|pid:none) Cryptococcus neoformans var. neofo... 44 0.012
(P34801) RecName: Full=G2/mitotic-specific cyclin-2; &S41710(S4... 44 0.012
BC077260_1(BC077260|pid:none) Xenopus laevis cyclin A2, mRNA (cD... 44 0.012
BC081485_1(BC081485|pid:none) Danio rerio zgc:103540, mRNA (cDNA... 44 0.012
AY227808_1(AY227808|pid:none) Lytechinus variegatus cyclin B mRN... 44 0.012
D50735_1(D50735|pid:none) Nicotiana tabacum mRNA for A-type cycl... 44 0.016
T02966(T02966) cyclin A-type (clone 19) - common tobacco &X9296... 44 0.016
EU969147_1(EU969147|pid:none) Zea mays clone 326336 unknown mRNA. 44 0.016
EU961786_1(EU961786|pid:none) Zea mays clone 238246 cyclin B2 mR... 44 0.016
T02967(T02967) cyclin A-type (clone30) - common tobacco &X92967... 44 0.016
BT036639_1(BT036639|pid:none) Zea mays full-length cDNA clone ZM... 44 0.016
AB443443_1(AB443443|pid:none) Gryllus bimaculatus cycB3 mRNA for... 44 0.016
B57742(B57742) cyclin Ib - maize &U10078_1(U10078|pid:none) 44 0.016
BC106386_1(BC106386|pid:none) Xenopus laevis hypothetical protei... 44 0.016
Y08016_1(Y08016|pid:none) S.granularis mRNA for cyclin B. 44 0.016
AM471814_1(AM471814|pid:none) Vitis vinifera contig VV78X201399.... 44 0.016
A48100(A48100) B-type cyclin, Cig2 - fission yeast (Schizosaccha... 44 0.016
CP000582_275(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 44 0.016
AF126105_1(AF126105|pid:none) Lupinus luteus mitotic cyclin B1-1... 41 0.020
AM269973_2(AM269973|pid:none) Aspergillus niger contig An01c0260... 44 0.020
BT069967_1(BT069967|pid:none) Zea mays full-length cDNA clone ZM... 44 0.020
BT055761_1(BT055761|pid:none) Zea mays full-length cDNA clone ZM... 44 0.020
BC108565_1(BC108565|pid:none) Xenopus laevis hypothetical protei... 44 0.020
EU967602_1(EU967602|pid:none) Zea mays clone 304745 cyclin B2 mR... 44 0.020
X72890_1(X72890|pid:none) S.cerevisiae CLB6 gene for B-type cycl... 44 0.020
Z75660_1(Z75660|pid:none) S.rostrata mRNA mitotic cyclin. 44 0.020
CR382139_1031(CR382139|pid:none) Debaryomyces hansenii strain CB... 44 0.020
(P34800) RecName: Full=G2/mitotic-specific cyclin-1; &S41709(S4... 44 0.020
AB008189_1(AB008189|pid:none) Pisum sativum cycB1 mRNA for cycli... 44 0.020
(P32943) RecName: Full=S-phase entry cyclin-6; &AY693095_1(AY69... 44 0.020
(P24866) RecName: Full=G1/S-specific cyclin CLN1; &M76587_1(M76... 43 0.026
AB077361_1(AB077361|pid:none) Daucus carota DcCycB1-4 mRNA for C... 43 0.026
(P36630) RecName: Full=G2/mitotic-specific cyclin cig2; &AL5125... 43 0.026
AF126107_1(AF126107|pid:none) Lupinus luteus mitotic cyclin B1-3... 43 0.026
D89635_1(D89635|pid:none) Nicotiana tabacum mRNA for B-type cycl... 43 0.035
AF334142_1(AF334142|pid:none) Asterina pectinifera cyclin B (cyc... 43 0.035
A35144(A35144;S12562;S03544) cyclin B - fruit fly (Drosophila me... 43 0.035
FN392322_632(FN392322|pid:none) Pichia pastoris GS115 chromosome... 43 0.035
AM920437_530(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 43 0.035
AP006852_365(AP006852|pid:none) Candida albicans genomic DNA, ch... 43 0.035
FN357319_22(FN357319|pid:none) Schistosoma mansoni genome sequen... 43 0.035
T09596(T09596) cyclin cyc3 - alfalfa &X85783_1(X85783|pid:none) 42 0.045
(P51988) RecName: Full=G2/mitotic-specific cyclin-B; Flags: Frag... 42 0.045
BT045855_1(BT045855|pid:none) Salmo salar clone ssal-rgf-534-307... 42 0.059
AF173864_1(AF173864|pid:none) Carassius auratus gibelio cyclin A... 42 0.059
AY260969_1(AY260969|pid:none) Ustilago maydis B-type cyclin 1 (c... 42 0.059
AY027763_1(AY027763|pid:none) Homo sapiens MS6.3 cyclin B1 mRNA,... 42 0.059
BC155264_1(BC155264|pid:none) Danio rerio cyclin E2, mRNA (cDNA ... 42 0.059
(P47794) RecName: Full=G1/S-specific cyclin-E1; &BC045842_1(BC0... 42 0.059
S49206(S49206;S51612;S27406;B47211;S51631)G1 cyclin CLN1 - yeast... 42 0.059
AF268045_1(AF268045|pid:none) Danio rerio cyclin A1 mRNA, comple... 42 0.077
(Q2V3B2) RecName: Full=Cyclin-D5-1; AltName: Full=G1/S-specific ... 42 0.077
(Q9FVX0) RecName: Full=Cyclin-A1-2; AltName: Full=G2/mitotic-spe... 42 0.077
A96803(A96803) probable mitotic cyclin a2-type [imported] - Arab... 42 0.077
AY260970_1(AY260970|pid:none) Ustilago maydis B-type cyclin 2 (c... 42 0.077
BT043319_1(BT043319|pid:none) Zea mays full-length cDNA clone ZM... 42 0.077
AB247280_1(AB247280|pid:none) Camellia sinensis cycb mRNA for cy... 41 0.10
AB183429_1(AB183429|pid:none) Anguilla japonica mRNA for cyclin ... 41 0.10
FM992694_360(FM992694|pid:none) Candida dubliniensis CD36 chromo... 41 0.10
AJ243499_1(AJ243499|pid:none) Medicago sativa mRNA for cyclin A2... 41 0.10
AJ006772_1(AJ006772|pid:none) Drosophila melanogaster mRNA for c... 41 0.13
M68881_1(M68881|pid:none) S.pombe cigl+ gene, complete cds. 41 0.13
(Q9I7I0) RecName: Full=G2/mitotic-specific cyclin-B3; &AE014297... 41 0.13
A40270(A40270;C40268) cyclin E - human &AF518727_1(AF518727|pid... 41 0.13
T09960(T09960) mitosis-specific cyclin 1 - red goosefoot &Y1016... 41 0.13
AB091346_1(AB091346|pid:none) Daucus carota Dauca;CycB1;1 mRNA f... 41 0.13
AM424613_1(AM424613|pid:none) Vitis vinifera contig VV78X159476.... 41 0.13
AY893056_1(AY893056|pid:none) Synthetic construct Homo sapiens c... 41 0.13
AL121720_2(AL121720|pid:none) S.pombe chromosome III cosmid c4E9. 41 0.13
AB077358_1(AB077358|pid:none) Daucus carota DcCycB1-1 mRNA for C... 41 0.13
AC118286_11(AC118286|pid:none) Oryza sativa (japonica cultivar-g... 40 0.17
AP008207_2830(AP008207|pid:none) Oryza sativa (japonica cultivar... 40 0.17
EU964476_1(EU964476|pid:none) Zea mays clone 279166 cyclin IaZm ... 40 0.17
AX040974_1(AX040974|pid:none) Sequence 21 from Patent WO0065040.... 40 0.17
U28990_1(U28990|pid:none) Gallus gallus cyclin E gene, exon 10, ... 40 0.17
AF512432_1(AF512432|pid:none) Triticum aestivum cyclin D2 (CycD2... 40 0.17
(Q0JIF2) RecName: Full=Cyclin-B1-1; AltName: Full=G2/mitotic-spe... 40 0.17
AY340664_1(AY340664|pid:none) Cryptococcus neoformans var. neofo... 40 0.17
AF126108_1(AF126108|pid:none) Lupinus luteus mitotic cyclin B1-4... 40 0.22
AB026627_1(AB026627|pid:none) Carassius auratus mRNA for cyclin ... 40 0.22
(P39949) RecName: Full=G1/S-specific cyclin-E1; 40 0.29
AB066208_1(AB066208|pid:none) Allium cepa AcCycB1 mRNA for cycli... 40 0.29
BC003499_1(BC003499|pid:none) Mus musculus cyclin E1, mRNA (cDNA... 40 0.29
AM494967_9(AM494967|pid:none) Leishmania braziliensis chromosome... 40 0.29
BC062152_1(BC062152|pid:none) Mus musculus cyclin E1, mRNA (cDNA... 40 0.29
BC162008_1(BC162008|pid:none) Rattus norvegicus cyclin E1, mRNA ... 40 0.29
D14015_1(D14015|pid:none) Rattus rattus mRNA for cyclin E, compl... 40 0.29
AY033440_1(AY033440|pid:none) Helianthus annuus cyclin D3 mRNA, ... 40 0.29
BC084588_1(BC084588|pid:none) Mus musculus cyclin E1, mRNA (cDNA... 40 0.29
AJ314765_1(AJ314765|pid:none) Homo sapiens mRNA for cyclin B3 is... 39 0.38
AY063461_1(AY063461|pid:none) Helianthus tuberosus cyclin D3 (Cy... 39 0.38
(Q8WWL7) RecName: Full=G2/mitotic-specific cyclin-B3; &AL591367... 39 0.38
(P39963) RecName: Full=G2/mitotic-specific cyclin-B3; &S41708(S... 39 0.38
AB008188_1(AB008188|pid:none) Pisum sativum cycD1 mRNA for cycli... 39 0.38
CR382129_521(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 39 0.38
AF401313_1(AF401313|pid:none) Sphoeroides annulatus cyclin-depen... 39 0.38
FN357412_24(FN357412|pid:none) Schistosoma mansoni genome sequen... 39 0.50
AB077359_1(AB077359|pid:none) Daucus carota DcCycB1-2 mRNA for C... 39 0.50
EU972105_1(EU972105|pid:none) Zea mays clone 375085 cyclin-A2 mR... 39 0.65
EU952232_1(EU952232|pid:none) Zea mays clone 1234256 cyclin IaZm... 39 0.65
CP000076_5894(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 39 0.65
T18789(T18789)hypothetical protein BE10.2 - Caenorhabditis elegans 39 0.65
AM746118_1(AM746118|pid:none) Populus trichocarpa partial mRNA f... 39 0.65
FJ168555_8(FJ168555|pid:none) Bodo saltans clone fosmid 93D02, c... 38 0.85
AM502248_8(AM502248|pid:none) Leishmania infantum chromosome 30. 38 0.85
AJ002590_1(AJ002590|pid:none) Lycopersicon esculentum mRNA for D... 38 0.85
EF147193_1(EF147193|pid:none) Populus trichocarpa clone WS01228_... 38 1.1
AF181993_1(AF181993|pid:none) Populus tremula x Populus tremuloi... 38 1.1
AM746116_1(AM746116|pid:none) Populus trichocarpa mRNA for D3-ty... 38 1.1
(Q810T2) RecName: Full=G2/mitotic-specific cyclin-B3; &AJ555464... 38 1.1
AE016823_1329(AE016823|pid:none) Leptospira interrogans serovar ... 37 1.5
AF318615_1(AF318615|pid:none) Strongylocentrotus purpuratus cycl... 37 1.5
AF051225_1(AF051225|pid:none) Picea mariana probable G2/mitotic-... 37 1.5
DQ017758_1(DQ017758|pid:none) Ustilago maydis G1 cyclin (cln1) g... 37 1.9
AM920433_491(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 37 1.9
(Q659K0) RecName: Full=G2/mitotic-specific cyclin-B3; &AJ833648... 37 1.9
AJ132929_1(AJ132929|pid:none) Medicago sativa cycD3 gene, type I... 37 1.9
AY809873_1(AY809873|pid:none) Schistosoma japonicum SJCHGC07225 ... 37 1.9
(P50756) RecName: Full=G1/S-specific cyclin-E1; &BC077766_1(BC0... 37 1.9
EU325650_1(EU325650|pid:none) Solanum tuberosum D-type cyclin fa... 37 1.9
(P42751) RecName: Full=Cyclin-D1-1; AltName: Full=G1/S-specific ... 37 2.5
AM270145_5(AM270145|pid:none) Aspergillus niger contig An07c0280... 37 2.5
S51650(S51650)cyclin delta-1 - Arabidopsis thaliana 37 2.5
AL021176_2(AL021176|pid:none) Caenorhabditis elegans YAC Y43E12A... 37 2.5
FJ262735_1(FJ262735|pid:none) Populus tomentosa cyclin B mRNA, c... 37 2.5
AC146856_11(AC146856|pid:none) Medicago truncatula clone mth2-16... 36 3.2
BC142772_1(BC142772|pid:none) Danio rerio si:ch211-132b12.8, mRN... 36 3.2
AM746114_1(AM746114|pid:none) Populus trichocarpa partial mRNA f... 36 3.2
CP000961_1657(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 36 3.2
T03675(T03675) cyclin 2 - rice &X82036_1(X82036|pid:none) 36 4.2
CP000926_5245(CP000926|pid:none) Pseudomonas putida GB-1, comple... 36 4.2
AY776172_1(AY776172|pid:none) Nicotiana tabacum cyclin D-like pr... 36 4.2
AE014185_317(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 36 4.2
AB247282_1(AB247282|pid:none) Camellia sinensis cycD3 mRNA for c... 36 4.2
(Q9FGQ7) RecName: Full=Cyclin-D3-2; AltName: Full=G1/S-specific ... 36 4.2
(O48790) RecName: Full=Cyclin-B1-4; AltName: Full=G2/mitotic-spe... 35 5.5
AB478416_1(AB478416|pid:none) Ipomoea batatas CycD3;1 mRNA for c... 35 5.5
BC157769_1(BC157769|pid:none) Xenopus tropicalis cyclin E1, mRNA... 35 5.5
AB067726_1(AB067726|pid:none) Allium cepa AcCycB2 mRNA for cycli... 35 5.5
(O14332) RecName: Full=Meiosis-specific cyclin rem1; &CU329671_... 35 5.5
CP000356_2315(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 35 5.5
CP000949_5012(CP000949|pid:none) Pseudomonas putida W619, comple... 35 7.2
AP007151_1304(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 35 7.2
AJ250397_1(AJ250397|pid:none) Antirrhinum majus partial mRNA for... 35 7.2
(Q10PQ9) RecName: Full=Cyclin-SDS-like; AltName: Full=Protein SO... 35 7.2
AP008212_488(AP008212|pid:none) Oryza sativa (japonica cultivar-... 35 9.4
AC152421_22(AC152421|pid:none) Medicago truncatula clone mth2-7h... 35 9.4
AY321328_1(AY321328|pid:none) Rattus norvegicus Ac2-059 mRNA, co... 35 9.4
AK105241_1(AK105241|pid:none) Oryza sativa Japonica Group cDNA c... 35 9.4

>AC117081_31(AC117081|pid:none) Dictyostelium discoideum chromosome 2
map 5862124-6045772 strain AX4, complete sequence.
Length = 694

Score = 302 bits (773), Expect(3) = 6e-91
Identities = 152/154 (98%), Positives = 152/154 (98%)
Frame = +3

Query: 972 TIRMNKRXLQMTISIYDDFMDYIVGDVKPEKFEEVDVMQLVAVSSXSIASKLEELEEYQP 1151
TIRMNKR LQMTISIYDDFMDYIVGDVKPEKFEEVDVMQLVAVSS SIASKLEELEEYQP
Sbjct: 471 TIRMNKRTLQMTISIYDDFMDYIVGDVKPEKFEEVDVMQLVAVSSLSIASKLEELEEYQP 530

Query: 1152 SIRELNYSTNNSYTHDGIVKTEMGILSILKYKVMYPTPSHFLDYLLLITIQPYDFFDATK 1331
SIRELNYSTNNSYTHDGIVKTEMGILSILKYKVMYPTPSHFLDYLLLITIQPYDFFDATK
Sbjct: 531 SIRELNYSTNNSYTHDGIVKTEMGILSILKYKVMYPTPSHFLDYLLLITIQPYDFFDATK 590

Query: 1332 DSQITFANQFKLINDQILNISYKNLKYRQYLPSI 1433
DSQITFANQFKLINDQILNISYKNLKYRQYLPSI
Sbjct: 591 DSQITFANQFKLINDQILNISYKNLKYRQYLPSI 624

Score = 54.3 bits (129), Expect(3) = 6e-91
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +1

Query: 1432 LVACASIASTRTIMGIEPAWKPSLRK 1509
++ACASIASTRTIMGIEPAWKPSLRK
Sbjct: 624 IIACASIASTRTIMGIEPAWKPSLRK 649

Score = 25.0 bits (53), Expect(3) = 6e-91
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2

Query: 938 DVIDFLVDLTS 970
DVIDFLVDLTS
Sbjct: 460 DVIDFLVDLTS 470

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,195,475,279
Number of extensions: 39968119
Number of successful extensions: 93650
Number of sequences better than 10.0: 397
Number of HSP's gapped: 93400
Number of HSP's successfully gapped: 405
Length of query: 503
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 370
Effective length of database: 620,718,517
Effective search space: 229665851290
Effective search space used: 229665851290
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.62 alm: 0.29 top: 0.43 tms: 0.20 mit: 0.17 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 1.00 m3b: 0.00 m_ : 0.00

40.0 %: endoplasmic reticulum
16.0 %: mitochondrial
12.0 %: plasma membrane
8.0 %: extracellular, including cell wall
4.0 %: cytoplasmic
4.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: Golgi
4.0 %: vesicles of secretory system
4.0 %: nuclear

>> prediction for Contig-U15667-1 is end

VS (DIR, S) 2
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 2
SL (DIR, L) 2
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0