>Contig-U03165-1 (Contig-U03165-1Q) /CSM_Contig/Contig-U03165-1Q.Seq.d
ACTTATGTTTCTCAAAACAATCAAAAAACTATTTATTAATATTATTGTAA
AACCCATTAGTTTCGCTGTTTTTGTTATTTTAATAGTTTTTGAAAAATTA
AAATATAAAATTAGAATGTCACATATACCATATACAGATGACAATTTAAA
TAATCAAATTGAAATTAAAGAAAATGGTGAATTATTAGATGAAAATGGTA
TATTAAAAATAAAAGGATGGTCAAGACAACCCTATTTAAAGTATAACCCA
GAACAATTATCAAAATTTAGAAAATCATTTAGATTAAAAGAATGGAATTA
TTACTCAATTGGATCCAATAGTTTTTATTTTGCAGTTGTCGCTATTGATC
TAGGTTATGCATGTATTTATCAATGTTTTTTCATTGATTTTGAAAAGGAT
TATAAAAATTTAAATGAAAATCAACCACAACAACCATCAGAACCATCAGA
TTATATTATGGATGAAATTAGATTTGCAACACCATTCTCAAAAGGATTAT
GTTTACCATCAGATAGCTGTGAACATGGTTGTCATACAAAATATGATTCA
AATAACTTTTCAATTGAATTTAATTCAATTTGTAGTGAACATCTTAATAA
AGATGATGAAAGTAGTGATAGTAATAATAATAATTCAAAAATTAAACATC
ATATTAAATTTTATAGTAAAAAGGGTCAACTTGAAGGTGATATAGTATTT
GATTTATCACCAACTAGAGAATCAATTGTATTGATGACACCAATTGGTAA
AGAGAATTTCTACTATAATAGAAAAACAAATTTGATACCAGTTGGTGGTA
GTTTAAAAGTTAAAGGTGTAGAACAATTAAATGGTGACATCAATTCAATT
GCAAATGATTGTTTTGGTATTATGGATTGGGGTAGAGGTATTTGGGAATA
TAATAGCTTTTGGTTATGGTCATCTGCTTGGGGTAAAGTCGATGGAATTC
CAGTTGGTTTAAATTTTGGATCTGGTTTTGGTGATCTTTCAACTCATACT
GAAAATGGAGTAAATGTGAATGGAATCGTCCATAAATTAGGTCATGTAGA
TATAGAATACAATGAATCAAACCTAATGGAACCTTGGAAATTCATTTGTA
AGCATGGTAGATTTGGTGAACAACCTCTCATCTTTACTCCATTCAAAAAG
AAGTATGATAATAATGATTTCACCGTTTTCATTTCAAGTTTTCATCAAAT
TCTTGGTACTTTTACTGGTGAAATCATTTTAGATGATGGTAGTAGATTAA
AAATAAATTTAATTGGCTTCTCTGAAGTTCATAAAGCAAGATGGTAAAAT
TTTAAAAAATAAAATAAAAAAATAAAATAAAAAAATAAAATAAATAAATA
ATAAAACAAAGTAAATAAAATAATAAATAAATTTTACAAAGAGA

est1=CFD585F,1,638
est2=SFK169F,2,657
est3=CFF258F,4,588
est4=SFK221F,13,565
est5=SLK724F,22,131
est6=CFF258Z,609,1395
est7=SLK724Z,973,1372

LMFLKTIKKLFINIIVKPISFAVFVILIVFEKLKYKIRMSHIPYTDDNLNNQIEIKENGE
LLDENGILKIKGWSRQPYLKYNPEQLSKFRKSFRLKEWNYYSIGSNSFYFAVVAIDLGYA
CIYQCFFIDFEKDYKNLNENQPQQPSEPSDYIMDEIRFATPFSKGLCLPSDSCEHGCHTK
YDSNNFSIEFNSICSEHLNKDDESSDSNNNNSKIKHHIKFYSKKGQLEGDIVFDLSPTRE
SIVLMTPIGKENFYYNRKTNLIPVGGSLKVKGVEQLNGDINSIANDCFGIMDWGRGIWEY
NSFWLWSSAWGKVDGIPVGLNFGSGFGDLSTHTENGVNVNGIVHKLGHVDIEYNESNLME
PWKFICKHGRFGEQPLIFTPFKKKYDNNDFTVFISSFHQILGTFTGEIILDDGSRLKINL
IGFSEVHKARW*nfkk*nkkik*knkink**nkvnkiinkfyke

Frame A:
tyvsqnnqktiy*yyckth*frcfcyfnsf*kiki*n*nvtytiyr*qfk*sn*n*rkw*
iir*kwyiknkrmvkttlfkv*prtiiki*kii*ikrmelllnwiq*flfcscry*srlc
mylsmffh*f*kgl*kfk*ksttttirtirlyyg*n*icntilkrimftir*l*twlsyk
i*fk*lfn*i*fnl**ts**r**k*******fkn*tsy*il**kgst*r*ysi*fitn*r
inciddtnw*refll**knkfdtsww*fks*rcrtikw*hqfnck*lfwyyglg*rylgi
**llvmviclg*srwnsswfkfwiwfw*sfnsy*kwskcewnrp*irscryriq*ikpng
tleihl*aw*iw*ttshlysiqkev****fhrfhfkfssnswyfyw*nhfr*w**iknkf
nwll*ss*skmvkf*kik*knkikk*nk*iikqsk*nnk*ilqr


Frame B:
LMFLKTIKKLFINIIVKPISFAVFVILIVFEKLKYKIRMSHIPYTDDNLNNQIEIKENGE
LLDENGILKIKGWSRQPYLKYNPEQLSKFRKSFRLKEWNYYSIGSNSFYFAVVAIDLGYA
CIYQCFFIDFEKDYKNLNENQPQQPSEPSDYIMDEIRFATPFSKGLCLPSDSCEHGCHTK
YDSNNFSIEFNSICSEHLNKDDESSDSNNNNSKIKHHIKFYSKKGQLEGDIVFDLSPTRE
SIVLMTPIGKENFYYNRKTNLIPVGGSLKVKGVEQLNGDINSIANDCFGIMDWGRGIWEY
NSFWLWSSAWGKVDGIPVGLNFGSGFGDLSTHTENGVNVNGIVHKLGHVDIEYNESNLME
PWKFICKHGRFGEQPLIFTPFKKKYDNNDFTVFISSFHQILGTFTGEIILDDGSRLKINL
IGFSEVHKARW*nfkk*nkkik*knkink**nkvnkiinkfyke


Frame C:
lcfskqsknyllill*nplvslfllf**flkn*niklechiyhiqmti*iiklklkkmvn
y*mkmvy*k*kdgqdnpi*sitqnnyqnlenhld*kngiitqldpivfilqlslli*vmh
vfinvfslilkriiki*mkinhnnhqnhqiilwmkldlqhhsqkdyvyhqiavnmvviqn
miqitfqlnliqfvvnilikmmkvviviiiiqklniilnfivkrvnlkvi*yliyhqlen
qly**hqlvkristiiekqi*yqlvvv*klkv*nn*mvtsiqlqmivlvlwigvevfgni
iafgyghllgvksmefqlv*ildlvlvifqlilkme*m*messin*vm*i*ntmnqt*wn
lgnsfvsmvdlvnnlssllhskrsmiimispfsfqvfikflvlllvksf*mmvvd*k*i*
laslkfikqdgkilknkikk*nkkik*innktk*ik**inftkr

Query= Contig-U03165-1 (Contig-U03165-1Q)
/CSM_Contig/Contig-U03165-1Q.Seq.d
         (1394 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U03165-1 (Contig-U03165-1Q) /CSM_Contig/Conti...  2565  0.0
Contig-U10965-1 (Contig-U10965-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U04705-1 (Contig-U04705-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U09313-1 (Contig-U09313-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U02282-1 (Contig-U02282-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U14123-1 (Contig-U14123-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U13687-1 (Contig-U13687-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U13343-1 (Contig-U13343-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U12124-1 (Contig-U12124-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U12122-1 (Contig-U12122-1Q) /CSM_Contig/Conti...    40  0.006

>Contig-U03165-1 (Contig-U03165-1Q) /CSM_Contig/Contig-U03165-1Q.Seq.d
          Length = 1394

 Score = 2565 bits (1294), Expect = 0.0
 Identities = 1294/1294 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    acttatgtttctcaaaacaatcaaaaaactatttattaatattattgtaaaacccattag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    acttatgtttctcaaaacaatcaaaaaactatttattaatattattgtaaaacccattag 60

                                                                        
Query: 61   tttcgctgtttttgttattttaatagtttttgaaaaattaaaatataaaattagaatgtc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tttcgctgtttttgttattttaatagtttttgaaaaattaaaatataaaattagaatgtc 120

                                                                        
Query: 121  acatataccatatacagatgacaatttaaataatcaaattgaaattaaagaaaatggtga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  acatataccatatacagatgacaatttaaataatcaaattgaaattaaagaaaatggtga 180

                                                                        
Query: 181  attattagatgaaaatggtatattaaaaataaaaggatggtcaagacaaccctatttaaa 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  attattagatgaaaatggtatattaaaaataaaaggatggtcaagacaaccctatttaaa 240

                                                                        
Query: 241  gtataacccagaacaattatcaaaatttagaaaatcatttagattaaaagaatggaatta 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gtataacccagaacaattatcaaaatttagaaaatcatttagattaaaagaatggaatta 300

                                                                        
Query: 301  ttactcaattggatccaatagtttttattttgcagttgtcgctattgatctaggttatgc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ttactcaattggatccaatagtttttattttgcagttgtcgctattgatctaggttatgc 360

                                                                        
Query: 361  atgtatttatcaatgttttttcattgattttgaaaaggattataaaaatttaaatgaaaa 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  atgtatttatcaatgttttttcattgattttgaaaaggattataaaaatttaaatgaaaa 420

                                                                        
Query: 421  tcaaccacaacaaccatcagaaccatcagattatattatggatgaaattagatttgcaac 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  tcaaccacaacaaccatcagaaccatcagattatattatggatgaaattagatttgcaac 480

                                                                        
Query: 481  accattctcaaaaggattatgtttaccatcagatagctgtgaacatggttgtcatacaaa 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  accattctcaaaaggattatgtttaccatcagatagctgtgaacatggttgtcatacaaa 540

                                                                        
Query: 541  atatgattcaaataacttttcaattgaatttaattcaatttgtagtgaacatcttaataa 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  atatgattcaaataacttttcaattgaatttaattcaatttgtagtgaacatcttaataa 600

                                                                        
Query: 601  agatgatgaaagtagtgatagtaataataataattcaaaaattaaacatcatattaaatt 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  agatgatgaaagtagtgatagtaataataataattcaaaaattaaacatcatattaaatt 660

                                                                        
Query: 661  ttatagtaaaaagggtcaacttgaaggtgatatagtatttgatttatcaccaactagaga 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  ttatagtaaaaagggtcaacttgaaggtgatatagtatttgatttatcaccaactagaga 720

                                                                        
Query: 721  atcaattgtattgatgacaccaattggtaaagagaatttctactataatagaaaaacaaa 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  atcaattgtattgatgacaccaattggtaaagagaatttctactataatagaaaaacaaa 780

                                                                        
Query: 781  tttgataccagttggtggtagtttaaaagttaaaggtgtagaacaattaaatggtgacat 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  tttgataccagttggtggtagtttaaaagttaaaggtgtagaacaattaaatggtgacat 840

                                                                        
Query: 841  caattcaattgcaaatgattgttttggtattatggattggggtagaggtatttgggaata 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  caattcaattgcaaatgattgttttggtattatggattggggtagaggtatttgggaata 900

                                                                        
Query: 901  taatagcttttggttatggtcatctgcttggggtaaagtcgatggaattccagttggttt 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  taatagcttttggttatggtcatctgcttggggtaaagtcgatggaattccagttggttt 960

                                                                        
Query: 961  aaattttggatctggttttggtgatctttcaactcatactgaaaatggagtaaatgtgaa 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  aaattttggatctggttttggtgatctttcaactcatactgaaaatggagtaaatgtgaa 1020

                                                                        
Query: 1021 tggaatcgtccataaattaggtcatgtagatatagaatacaatgaatcaaacctaatgga 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tggaatcgtccataaattaggtcatgtagatatagaatacaatgaatcaaacctaatgga 1080

                                                                        
Query: 1081 accttggaaattcatttgtaagcatggtagatttggtgaacaacctctcatctttactcc 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 accttggaaattcatttgtaagcatggtagatttggtgaacaacctctcatctttactcc 1140

                                                                        
Query: 1141 attcaaaaagaagtatgataataatgatttcaccgttttcatttcaagttttcatcaaat 1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 attcaaaaagaagtatgataataatgatttcaccgttttcatttcaagttttcatcaaat 1200

                                                                        
Query: 1201 tcttggtacttttactggtgaaatcattttagatgatggtagtagattaaaaataaattt 1260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tcttggtacttttactggtgaaatcattttagatgatggtagtagattaaaaataaattt 1260

                                              
Query: 1261 aattggcttctctgaagttcataaagcaagatgg 1294
            ||||||||||||||||||||||||||||||||||
Sbjct: 1261 aattggcttctctgaagttcataaagcaagatgg 1294


>Contig-U10965-1 (Contig-U10965-1Q) /CSM_Contig/Contig-U10965-1Q.Seq.d
          Length = 1820

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 612  gtagtgatagtaataataataat 634
            |||||||||||||||||||||||
Sbjct: 1419 gtagtgatagtaataataataat 1441


 Score = 30.2 bits (15), Expect = 6.1
 Identities = 27/31 (87%)
 Strand = Plus / Plus

                                           
Query: 604  tgatgaaagtagtgatagtaataataataat 634
            ||||||||  ||| ||| |||||||||||||
Sbjct: 1498 tgatgaaaaaagtaataataataataataat 1528


 Score = 30.2 bits (15), Expect = 6.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 620  agtaataataataat 634
            |||||||||||||||
Sbjct: 1508 agtaataataataat 1522


>Contig-U04705-1 (Contig-U04705-1Q) /CSM_Contig/Contig-U04705-1Q.Seq.d
          Length = 834

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 413 aatgaaaatcaaccacaacaac 434
           ||||||||||||||||||||||
Sbjct: 516 aatgaaaatcaaccacaacaac 537


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 46,588
Number of Sequences: 6905
Number of extensions: 46588
Number of successful extensions: 12376
Number of sequences better than 10.0: 1047
length of query: 1394
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1378
effective length of database: 5,564,391
effective search space: 7667730798
effective search space used: 7667730798
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U03165-1 (Contig-U03165-1Q) /CSM_Contig/Contig-U03165-1Q.Seq.d
         (1394 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AC116919) Dictyostelium discoideum chromosome 2 map complem...  2141   0.0    1
(BJ372162) Dictyostelium discoideum cDNA clone:ddc11c16, 3' ...  1360   0.0    1
(BJ390223) Dictyostelium discoideum cDNA clone:dds21i17, 5' ...   878   0.0    3
(BJ360976) Dictyostelium discoideum cDNA clone:ddc8i21, 5' e...   841   0.0    2
(BJ358817) Dictyostelium discoideum cDNA clone:ddc11c16, 5' ...   741   0.0    2
(BJ390081) Dictyostelium discoideum cDNA clone:dds21i06, 5' ...   696   0.0    2
(AU054106) Dictyostelium discoideum slug cDNA, clone SLK724.      630   e-176  1
(AU060642) Dictyostelium discoideum slug cDNA, clone SLK724.      218   4e-52  1
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8...    38   2e-05  14
(CP001056) Clostridium botulinum B str. Eklund 17B, complete...    38   1e-04  19
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    42   3e-04  8
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    36   3e-04  15
(DQ927305) Tetrahymena pigmentosa strain UM1060 mitochondrio...    34   3e-04  9
(AL844509) Plasmodium falciparum chromosome 13.                    40   3e-04  12
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    38   3e-04  10
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771...    36   5e-04  9
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255...    36   5e-04  21
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...    40   6e-04  9
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135...    34   0.002  11
(AL844507) Plasmodium falciparum chromosome 8.                     42   0.002  14
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen...    38   0.003  14
(DD010736) Diagnosis of known genetic Parameters within the ...    38   0.003  12
(AC117080) Dictyostelium discoideum chromosome 2 map complem...    40   0.004  9
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ...    40   0.004  13
(AL445563) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    40   0.004  16
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    36   0.004  22
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098...    44   0.005  9
(AL844506) Plasmodium falciparum chromosome  7.                    40   0.006  14
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    38   0.007  10
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)...    36   0.008  19
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    38   0.008  8
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI...    34   0.009  15
(EJ946902) 1093018918746 Global-Ocean-Sampling_GS-30-02-01-1...    42   0.010  3
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6...    38   0.012  12
(AE017308) Mycoplasma mobile 163K complete genome.                 36   0.013  20
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome.         38   0.014  19
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    36   0.014  12
(CK855066) SWWbL3CAW32H10SK Wuchereria bancrofti L3 cDNA (SA...    54   0.015  1
(AA841011) MB3D6AA2E02T3 Brugia malayi day 6 post-infection ...    54   0.015  1
(EJ841266) 1093017833885 Global-Ocean-Sampling_GS-30-02-01-1...    42   0.015  3
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105...    34   0.015  8
(ER470005) 1092963947801 Global-Ocean-Sampling_GS-35-01-01-1...    42   0.017  3
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    36   0.018  7
(AC216469) Populus trichocarpa clone POP036-C22, complete se...    34   0.024  11
(CP000246) Clostridium perfringens ATCC 13124, complete genome.    36   0.025  17
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet...    36   0.027  19
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8...    32   0.029  9
(AC223076) Bos taurus clone CH240-430B1, WORKING DRAFT SEQUE...    36   0.030  8
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    36   0.031  12
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    38   0.032  13
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1...    34   0.032  12
(BX005440) Zebrafish DNA sequence from clone DKEY-248K5.           42   0.034  7
(CP000726) Clostridium botulinum A str. ATCC 19397, complete...    40   0.035  18
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    36   0.048  16
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    40   0.050  10
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    36   0.051  9
(CR936487) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    40   0.051  9
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084...    36   0.054  7
(CU694868) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   0.056  8
(AC157526) Pan troglodytes BAC clone CH251-513A15 from chrom...    52   0.059  1
(AC084782) Homo sapiens chromosome 15 clone RP11-48G14 map 1...    52   0.059  1
(AC068726) Homo sapiens chromosome 15 clone RP11-844G16 map ...    52   0.059  1
(AC083922) Homo sapiens chromosome 8 clone RP11-63H17 map 8,...    52   0.059  1
(AC080035) Homo sapiens chromosome 15 clone CTD-2501G10 map ...    52   0.059  1
(AC181263) Strongylocentrotus purpuratus clone R3-4012A17, W...    52   0.059  1
(AC180536) Strongylocentrotus purpuratus clone R3-3098K10, W...    52   0.059  1
(AC178783) Strongylocentrotus purpuratus clone R3-21G01, WOR...    52   0.059  1
(AC168447) Strongylocentrotus purpuratus clone R3-39A20, WOR...    52   0.059  1
(AZ195608) SP_1030_A2_F10_T7A Strongylocentrotus purpuratus,...    52   0.059  1
(CP000882) Hemiselmis andersenii chromosome 2, complete sequ...    36   0.066  11
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572...    40   0.067  9
(AC210556) Populus trichocarpa clone POP120-A02, complete se...    32   0.068  8
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    36   0.071  10
(CP000768) Campylobacter jejuni subsp. doylei 269.97, comple...    38   0.073  22
(AC184097) Populus trichocarpa clone Pop1-88A18, complete se...    38   0.075  7
(AX344558) Sequence 9 from Patent WO0200932.                       42   0.076  14
(EK188844) 1095460012102 Global-Ocean-Sampling_GS-31-01-01-1...    32   0.077  4
(AE014850) Plasmodium falciparum 3D7 chromosome 12, section ...    34   0.077  11
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    40   0.090  10
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ...    34   0.095  20
(BA000016) Clostridium perfringens str. 13 DNA, complete gen...    36   0.096  18
(AB109855) Cychrus kaznakovi mitochondrial CO1 gene for cyto...    44   0.10   2
(AB109854) Cychrus kaznakovi mitochondrial CO1 gene for cyto...    44   0.10   2
(BD453065) Diagnosis of Diseases Associated with tumor suppr...    36   0.11   6
(AX251544) Sequence 512 from Patent WO0168912.                     36   0.11   6
(AM485397) Vitis vinifera, whole genome shotgun sequence, co...    32   0.12   6
(CU457411) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   0.13   8
(AJ011856) Saccharomyces cerevisiae complete mitochondrial g...    34   0.13   8
(AP006425) Lotus japonicus genomic DNA, chromosome 1, clone:...    38   0.14   2
(CP000883) Hemiselmis andersenii chromosome 3, complete sequ...    32   0.15   11
(AC096654) Homo sapiens BAC clone RP11-17I18 from 2, complet...    34   0.15   10
(BX629347) Zebrafish DNA sequence from clone DKEY-103K21 in ...    36   0.16   8
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8...    40   0.17   12
(AE017243) Mycoplasma hyopneumoniae J, complete genome.            34   0.17   19
(FG300881) 1108799246317 New World Screwworm Larvae 9387 EST...    38   0.18   2
(FG283409) 1108770613864 New World Screwworm Egg 9261 ESTs C...    38   0.18   2
(FG289850) 1108793308025 New World Screwworm Egg 9261 ESTs C...    38   0.18   2
(CU633940) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   0.19   7
(AF088979) Dictyostelium discoideum beige protein homolog (l...    38   0.20   4
(AF160864) Tetrahymena pyriformis mitochondrial DNA, complet...    32   0.23   7
(AE014830) Plasmodium falciparum 3D7 chromosome 10 section 2...    36   0.23   12
(AL034559) Plasmodium falciparum MAL3P7.                           36   0.23   11
(CT030655) Mouse DNA sequence from clone RP23-259C9 on chrom...    50   0.23   1
(CQ609485) Sequence 37243 from Patent WO0171042.                   50   0.23   1
(AE013599) Drosophila melanogaster chromosome 2R, complete s...    50   0.23   1
(AC008188) Drosophila melanogaster, chromosome 2R, region 56...    50   0.23   1
(AC148088) Mus musculus chromosome 13 clone RP24-369H7 map 1...    50   0.23   1
(AC079560) Mus musculus clone RP23-455P22, WORKING DRAFT SEQ...    50   0.23   1
(AC233214) Solanum tuberosum chromosome 6 clone RHPOTKEY086B...    50   0.23   1
(AC219956) Bos taurus clone CH240-317P23, WORKING DRAFT SEQU...    50   0.23   1
(AC176579) Strongylocentrotus purpuratus clone R3-3077H02, W...    50   0.23   1
(AC018184) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    50   0.23   1
(AZ210638) SP_0154_A2_B01_SP6E Strongylocentrotus purpuratus...    50   0.23   1
(FI395164) CH322-117M20.y CHORI-322 Drosophila melanogaster ...    50   0.23   1
(ED413202) AUAC-aas83h02.g1 Ascaris suum whole genome shotgu...    50   0.23   1
(AL064854) Drosophila melanogaster genome survey sequence TE...    50   0.23   1
(BZ395125) EINDZ66TR EI_10_12_KB Entamoeba invadens genomic ...    50   0.23   1
(AG219895) Lotus japonicus DNA, clone:LjB02g19_r.                  50   0.23   1
(AL049181) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    38   0.24   11
(CU571104) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   0.25   10
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s...    32   0.26   13
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2...    34   0.26   11
(AC176644) Strongylocentrotus purpuratus clone R3-112N9, WOR...    38   0.27   9
(EK054173) 1092960001092 Global-Ocean-Sampling_GS-31-01-01-1...    42   0.28   2
(AM626474) Entamoeba dispar GSS, clone dispar129c10.q1k.           34   0.28   4
(AC091517) Homo sapiens 12 BAC RP11-777M1 (Roswell Park Canc...    34   0.29   9
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    36   0.30   11
(CP000825) Prochlorococcus marinus str. MIT 9215, complete g...    36   0.31   21
(AM480817) Vitis vinifera contig VV78X205698.91, whole genom...    40   0.32   4
(AU269543) Dictyostelium discoideum vegetative cDNA clone:VS...    34   0.33   3
(AM464458) Vitis vinifera contig VV78X183950.10, whole genom...    42   0.34   4
(AX458510) Sequence 56 from Patent WO0246454.                      34   0.34   6
(AC165772) Bos taurus clone CH240-160H23, WORKING DRAFT SEQU...    36   0.35   10
(AU269542) Dictyostelium discoideum vegetative cDNA clone:VS...    34   0.36   3
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    34   0.37   10
(AC116551) Dictyostelium discoideum chromosome 2 map complem...    36   0.38   11
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35...    34   0.40   11
(BX248082) Zebrafish DNA sequence from clone CH211-237B12 in...    40   0.40   9
(CU525306) H.melpomene DNA sequence from clone AEHM-13H8.          36   0.41   7
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co...    34   0.41   8
(AX344566) Sequence 17 from Patent WO0200932.                      34   0.42   12
(AX346829) Sequence 1900 from Patent WO0200928.                    34   0.42   5
(AC130803) Medicago truncatula clone mth2-10g3, complete seq...    32   0.42   9
(CR955012) Medicago truncatula chromosome 5 clone mth2-84f14...    34   0.43   11
(DQ927303) Tetrahymena malaccensis strain MP75 mitochondrion...    36   0.45   8
(AC124558) Mus musculus BAC clone RP23-248O8 from chromosome...    40   0.46   8
(AM466592) Vitis vinifera contig VV78X273584.6, whole genome...    38   0.47   4
(AC117082) Dictyostelium discoideum chromosome 2 map complem...    34   0.49   6
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s...    34   0.51   14
(CR382398) Plasmodium falciparum chromosome 6, complete sequ...    34   0.51   13
(CU915405) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   0.51   2
(CU914641) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.51   2
(AC171127) Helobdella robusta clone CH306-1A1, complete sequ...    36   0.52   2
(AC171131) Helobdella robusta clone CH306-1A2, complete sequ...    36   0.52   2
(CR762391) Zebrafish DNA sequence from clone DKEYP-52F4 in l...    34   0.54   6
(BX072534) Zebrafish DNA sequence from clone DKEY-16C1.            36   0.54   8
(AC157125) Bos taurus clone CH240-45K9, WORKING DRAFT SEQUEN...    44   0.55   5
(FJ435437) Ostrinia latipennis voucher CGSLSZ02 cytochrome o...    42   0.55   2
(FJ435436) Ostrinia furnacalis voucher ACACH01 cytochrome ox...    42   0.55   2
(EU128665) Ostrinia furnacalis voucher ACGD11 cytochrome oxi...    42   0.55   2
(EU128663) Ostrinia furnacalis voucher ACXJ08 cytochrome oxi...    42   0.55   2
(EU128662) Ostrinia furnacalis voucher ACSC07 cytochrome oxi...    42   0.55   2
(EU128661) Ostrinia furnacalis voucher ACGZ3 cytochrome oxid...    42   0.55   2
(AM446719) Vitis vinifera, whole genome shotgun sequence, co...    34   0.56   2
(CR940347) Theileria annulata genomic DNA chromosome 1 part 1.     36   0.57   21
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ...    46   0.59   11
(AC184396) Strongylocentrotus purpuratus clone R3-3106K1, WO...    38   0.59   6
(EI328810) GM_WBc0067F08.f GM_WBc Glycine max genomic clone ...    28   0.60   5
(AC007695) Homo sapiens 12q24 BAC RPCI11-124N23 (Roswell Par...    44   0.61   5
(FE232372) CAPG1712.fwd CAPG Naegleria gruberi amoeba stage ...    34   0.64   3
(CR382401) Plasmodium falciparum chromosome 6, complete sequ...    34   0.65   11
(CP000993) Borrelia recurrentis A1, complete genome.               40   0.66   19
(CL324234) RPCI44_474E12.r RPCI-44 Sus scrofa genomic clone ...    36   0.67   2
(AM489062) Vitis vinifera, whole genome shotgun sequence, co...    34   0.67   5
(AE015927) Clostridium tetani E88, complete genome.                42   0.67   19
(AX345795) Sequence 866 from Patent WO0200928.                     32   0.69   6
(AC229713) Medicago truncatula clone mth2-154m17, WORKING DR...    32   0.69   11
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7...    36   0.70   12
(CU138558) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   0.74   6
(EY316780) CAWX26815.rev CAWX Helobdella robusta Primary Ear...    44   0.78   2
(AC187854) Populus trichocarpa clone Pop1-11B14, complete se...    38   0.82   7
(EC821806) SME00001438 esmbsro2 Sawyeria marylandensis cDNA,...    46   0.82   2
(AC172650) Bos taurus clone CH240-257C17, WORKING DRAFT SEQU...    38   0.87   6
(BX323586) Zebrafish DNA sequence from clone CH211-3O3 in li...    40   0.88   10
(AB360996) Culicoides wadai mitochondrial cox1, tRNA-Leu, tR...    38   0.88   3
(AB360997) Culicoides wadai mitochondrial cox1, tRNA-Leu, tR...    38   0.89   3
(EC822874) SME00003539 esmbsro2 Sawyeria marylandensis cDNA,...    38   0.90   2
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3...    38   0.91   9
(AC164486) Danio rerio strain Tue clone CH211-31F19, WORKING...    40   0.91   10
(CR387929) Zebrafish DNA sequence from clone DKEY-172H18 in ...    48   0.92   1
(BX511101) Zebrafish DNA sequence from clone DKEYP-92F1 in l...    48   0.92   1
(AY566239) Amaryllis potyvirus polyprotein gene, partial cds.      48   0.92   1
(BV666987) S217P61687FF11.T0 Noemie Pan troglodytes troglody...    48   0.92   1
(AL731554) Mouse DNA sequence from clone RP23-337H1 on chrom...    48   0.92   1
(AC211561) Pan troglodytes BAC clone CH251-407G2 from chromo...    48   0.92   1
(AC200217) Pan troglodytes BAC clone CH251-611O20 from chrom...    48   0.92   1
(BD460250) Diagnosis of Diseases Associated with Cell Cycle.       48   0.92   1
(BD452172) Diagnosis of Diseases Associated with Cell Cycle.       48   0.92   1
(AX348947) Sequence 405 from Patent WO0202807.                     48   0.92   1
(AX345278) Sequence 349 from Patent WO0200928.                     48   0.92   1
(AX251786) Sequence 47 from Patent WO0168911.                      48   0.92   1
(AF518252) Heterosternuta pulcher 16S ribosomal RNA gene, pa...    48   0.92   1
(AC011296) Homo sapiens BAC clone RP11-96K1 from 7, complete...    48   0.92   1
(AC156728) Bos taurus clone CH240-52H4, WORKING DRAFT SEQUEN...    48   0.92   1
(AC152356) Otolemur garnettii clone CH256-457G22, WORKING DR...    48   0.92   1
(AC148958) Otolemur garnettii clone CH256-538K17, WORKING DR...    48   0.92   1
(AC096161) Rattus norvegicus clone CH230-11D21, *** SEQUENCI...    48   0.92   1
(CU915661) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.92   1
(AC222083) Bos taurus clone CH240-372L20, WORKING DRAFT SEQU...    48   0.92   1
(AZ631398) 1M0485K01R Mouse 10kb plasmid UUGC1M library Mus ...    48   0.92   1
(FI348628) CH321-38B07.x CHORI-321 Drosophila melanogaster g...    48   0.92   1
(EJ301147) 1095390026243 Global-Ocean-Sampling_GS-27-01-01-1...    48   0.92   1
(CG089368) PUFUN06TB ZM_0.6_1.0_KB Zea mays genomic clone ZM...    48   0.92   1
(AG138157) Pan troglodytes DNA, clone: PTB-152E03.F.               48   0.92   1
(EE549162) BNQA_UP_011_F08_18SEP2003_054 Brassica napus BNQA...    48   0.92   1
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975...    34   0.92   8
(BX323067) Zebrafish DNA sequence from clone CH211-277B21 in...    34   0.93   8
(AC128831) Rattus norvegicus clone CH230-483J17, *** SEQUENC...    38   0.95   6
(CP000111) Prochlorococcus marinus str. MIT 9312, complete g...    36   0.95   15
(AC177746) Strongylocentrotus purpuratus clone R3-1008E12, W...    38   0.95   10
(BX936413) Zebrafish DNA sequence from clone CH211-48M9 in l...    36   0.97   6
(BX548046) Zebrafish DNA sequence from clone DKEY-176G1 in l...    44   0.97   7
(CT027610) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   0.98   10
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5...    30   0.98   15
(EY341002) CAWZ10922.rev CAWZ Helobdella robusta Primary Lat...    44   0.99   2
(AC230118) Bos taurus clone CH240-521J23, WORKING DRAFT SEQU...    44   1.0    6
(AE014848) Plasmodium falciparum 3D7 chromosome 12, section ...    32   1.0    15
(AC179784) Strongylocentrotus purpuratus clone R3-1015G21, W...    40   1.0    5
(CP000727) Clostridium botulinum A str. Hall, complete genome.     36   1.0    18
(CP000963) Clostridium botulinum A3 str. Loch Maree plasmid ...    32   1.0    13
(EY362880) CAWZ8479.rev CAWZ Helobdella robusta Primary Late...    44   1.1    2
(EY352526) CAWZ18867.rev CAWZ Helobdella robusta Primary Lat...    44   1.1    2
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3...    42   1.1    15
(AF362368) Dictyostelium discoideum histidine kinase DhkF (d...    44   1.1    4
(AC184394) Strongylocentrotus purpuratus clone R3-3101M23, W...    36   1.1    8
(AE001410) Plasmodium falciparum 3D7 chromosome 2 section 47...    42   1.1    4
(DU100174) JBnY026M01F Brassica napus BAC library JBnY Brass...    34   1.1    4
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1...    32   1.1    14
(AG990704) Hemicentrotus pulcherrimus BAC clone: BUB1-15A12_...    38   1.1    2
(EY375276) CAXA15542.fwd CAXA Helobdella robusta Subtracted ...    38   1.1    2
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    34   1.1    13
(EY294067) CAWX11471.rev CAWX Helobdella robusta Primary Ear...    44   1.2    2
(AC209042) Populus trichocarpa clone POP052-O09, complete se...    36   1.2    8
(AM458656) Vitis vinifera contig VV78X186361.4, whole genome...    36   1.2    5
(AC190815) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB...    38   1.2    7
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ...    40   1.3    22
(CP000552) Prochlorococcus marinus str. MIT 9515, complete g...    34   1.3    19
(EI829907) POTJ505TF Solanum tuberosum RHPOTKEY BAC ends Sol...    44   1.3    2
(CU681837) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   1.3    5
(DQ642846) Plasmodium falciparum HB3 apicoplast, complete ge...    32   1.3    6
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9...    38   1.3    10
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214...    36   1.3    8
(AC173122) Bos taurus clone CH240-487J11, WORKING DRAFT SEQU...    40   1.3    8
(AC210653) Populus trichocarpa clone POP054-B08, complete se...    36   1.3    8
(AC016253) Homo sapiens chromosome 12 clone RP11-115E9, WORK...    44   1.3    5
(AC005505) Plasmodium falciparum chromosome 12 clone PFYAC18...    34   1.3    13
(AC116925) Dictyostelium discoideum chromosome 2 map 4189423...    34   1.4    5
(AC168743) Strongylocentrotus purpuratus clone R3-3004P24, W...    42   1.4    4
(AC165496) Bos taurus clone CH240-176A20, WORKING DRAFT SEQU...    34   1.4    7
(CR457452) Zebrafish DNA sequence from clone DKEY-52H10 in l...    44   1.4    7
(EJ458280) 1093018363834 Global-Ocean-Sampling_GS-28-01-01-1...    40   1.4    2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    34   1.4    7
(CR385038) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   1.4    7
(AX344573) Sequence 24 from Patent WO0200932.                      32   1.4    14
(AC087774) Homo sapiens 12p BAC RP11-633O13 (Roswell Park Ca...    44   1.4    7
(AM442169) Vitis vinifera contig VV78X151062.2, whole genome...    44   1.5    2
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome.       30   1.5    12
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g...    36   1.5    18
(AC149479) Populus trichocarpa clone Pop1-017N13, complete s...    36   1.5    6
(AM437593) Vitis vinifera contig VV78X222207.2, whole genome...    34   1.5    5
(AF482397) Dictyostelium discoideum ABC transporter AbcG20 (...    36   1.5    3
(AC166659) Bos taurus clone CH240-183F11, *** SEQUENCING IN ...    36   1.6    5
(CP000312) Clostridium perfringens SM101, complete genome.         36   1.6    16
(EF533697) Glycine max clone BAC GM_WBb035N07, *** SEQUENCIN...    46   1.6    8
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2...    38   1.6    8
(AF102575) Dictyostelium discoideum cell surface protein DTF...    30   1.7    5
(AJ002383) Dictyostelium discoideum mybB gene.                     34   1.7    3
(DY460827) 1593456 MARC 11BOV Bos taurus cDNA 5', mRNA seque...    34   1.8    3
(AF165818) Guillardia theta nucleomorph chromosome 1, comple...    30   1.8    15
(AM180355) Clostridium difficile 630 complete genome.              34   1.8    22
(AL445564) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    34   1.8    13
(AL808103) Mouse DNA sequence from clone RP23-301G2 on chrom...    34   1.8    2
(AC190969) Zea mays chromosome 6 clone CH201-48I21; ZMMBBc00...    34   1.8    2
(AF405554) Cryptosporidium parvum hypothetical protein gene,...    38   1.9    6
(CU138504) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   1.9    2
(BX088530) Zebrafish DNA sequence from clone DKEY-56F11 in l...    38   1.9    9
(AC205021) Zea mays chromosome 6 clone CH201-316F10; ZMMBBc0...    34   1.9    2
(AP005416) Oryza sativa Japonica Group genomic DNA, chromoso...    36   1.9    2
(CR788285) Zebrafish DNA sequence from clone DKEYP-99C4 in l...    40   1.9    7
(AC134236) Oryza sativa Japonica Group chromosome 3 clone OS...    36   1.9    2
(AC210486) Oryza glaberrima clone OG_BBa0079C16, complete se...    36   1.9    2
(AC203890) Zea mays chromosome 6 clone CH201-113L3; ZMMBBc01...    34   1.9    2
(AP004589) Oryza sativa Japonica Group genomic DNA, chromoso...    36   1.9    2
(AC210497) Oryza glaberrima clone OG_BBa0094P01, complete se...    36   1.9    2
(AC133216) Oryza sativa (japonica cultivar-group) chromosome...    36   1.9    2
(AB231864) Schistosoma mansoni gene for zinc finger protein ...    34   1.9    2
(AC118980) Oryza sativa Japonica Group chromosome 3 clone OJ...    36   1.9    2
(AC210489) Oryza glaberrima clone OG_BBa0083I10, complete se...    36   1.9    2
(AP003906) Oryza sativa Japonica Group genomic DNA, chromoso...    36   1.9    2
(AC145395) Oryza sativa (japonica cultivar-group) chromosome...    36   1.9    2
(AP009713) Lotus japonicus genomic DNA, clone: LjT37K03, TM1...    32   1.9    2
(AX345594) Sequence 665 from Patent WO0200928.                     42   2.0    2
(BX649298) Zebrafish DNA sequence from clone DKEY-12H2 in li...    34   2.0    7
(EA696953) Sequence 75832 from patent US 7365185.                  36   2.0    2
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041...    38   2.0    6
(AL929023) Zebrafish DNA sequence from clone DKEY-98G12 in l...    46   2.0    7
(AC019058) Homo sapiens BAC clone RP11-125B15 from Y, comple...    32   2.0    8
(AC192613) Trichinella spiralis BAC clone TS195-33H12 from c...    32   2.1    11
(FP102319) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   2.1    4
(AC006898) Caenorhabditis elegans clone Y73B6x, *** SEQUENCI...    32   2.1    11
(CU468865) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   2.1    6
(DQ927304) Tetrahymena paravorax strain RP mitochondrion, co...    32   2.1    7
(DQ338834) Cosmosatyrus leptoneuroides cytochrome c oxidase ...    36   2.1    3
(DQ338589) Chillanella stelligera cytochrome c oxidase subun...    36   2.1    3
(GO078348) PmTwN41E05.scf PmTwN Penaeus monodon cDNA 3', mRN...    36   2.2    3
(CU914757) S.lycopersicum DNA sequence from clone LE_HBa-34P...    34   2.2    8
(AX344569) Sequence 20 from Patent WO0200932.                      34   2.2    17
(DY682580) TTEA260TV Tetrahymena thermophila EST library, co...    34   2.2    3
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693...    34   2.3    8
(C94129) Dictyostelium discoideum slug cDNA, clone SSG443.         32   2.3    3
(AC176786) Strongylocentrotus purpuratus clone R3-3106G24, W...    40   2.3    9
(AC176637) Strongylocentrotus purpuratus clone R3-3080K09, W...    42   2.3    5
(AC223004) Bos taurus clone CH240-432J24, WORKING DRAFT SEQU...    38   2.3    4
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69...    44   2.3    10
(AC129651) Rattus norvegicus clone CH230-9A14, *** SEQUENCIN...    34   2.3    7
(AF250284) Amsacta moorei entomopoxvirus, complete genome.         32   2.4    13
(DB732406) Apis mellifera head cDNA, RIKEN full-length enric...    44   2.4    2
(AC168513) Strongylocentrotus purpuratus clone R3-3108L14, W...    40   2.4    5
(DX093867) AU_BAC002A2D07_T7 CHORI212 Ictalurus punctatus ge...    38   2.4    2
(AM458395) Vitis vinifera contig VV78X009796.12, whole genom...    38   2.4    5
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    40   2.4    19
(EA695882) Sequence 74761 from patent US 7365185.                  38   2.4    5
(CL209142) ZMMBBb0562F07r ZMMBBb (HindIII) Zea mays subsp. m...    34   2.4    2
(CZ168129) UCDRGdSpm231A_3.1 UCD RGdSpm Rice Insertions Oryz...    36   2.4    2
(AG904000) Oryza sativa Indica Group genomic DNA, BAC end se...    36   2.4    2
(AG904521) Oryza sativa Indica Group genomic DNA, BAC end se...    36   2.4    2
(CL840630) OR_CBa0068D14.f OR_CBa Oryza rufipogon genomic cl...    36   2.5    2
(EI056804) hgu0001da12.b1 hgu Oryza glaberrima genomic clone...    36   2.5    2
(AC182673) Populus trichocarpa clone Pop1-26A1, complete seq...    34   2.5    8
(CW527462) OP__Ba0028C16.r OP__Ba Oryza punctata genomic clo...    36   2.5    2
(EK333768) 1095467033385 Global-Ocean-Sampling_GS-31-01-01-1...    36   2.5    2
(AC192813) Pan troglodytes BAC clone CH251-57C7 from chromos...    32   2.5    11
(EA724894) Sequence 103773 from patent US 7365185.                 36   2.5    2
(DJ387385) Diagnosis of Diseases Associated with Apoptosis.        40   2.5    3
(AX345216) Sequence 287 from Patent WO0200928.                     40   2.5    3
(AX281293) Sequence 35 from Patent WO0177164.                      40   2.5    3
(DH535190) Rattus norvegicus DNA, BAC clone: RNB1-037I13, 5'...    34   2.5    3
(DB742456) Apis mellifera head cDNA, RIKEN full-length enric...    44   2.5    2
(AB284564) Polistes formosanus gene for 16S rRNA, partial se...    32   2.5    3
(AB284558) Polistes formosanus gene for 16S rRNA, partial se...    32   2.5    3
(AB284557) Polistes formosanus gene for 16S rRNA, partial se...    32   2.5    3
(AB284568) Polistes formosanus gene for 16S rRNA, partial se...    32   2.5    3
(AB284567) Polistes formosanus gene for 16S rRNA, partial se...    32   2.5    3
(AB284565) Polistes formosanus gene for 16S rRNA, partial se...    32   2.5    3
(AB284562) Polistes formosanus gene for 16S rRNA, partial se...    32   2.5    3
(AB284561) Polistes formosanus gene for 16S rRNA, partial se...    32   2.5    3
(AB284560) Polistes formosanus gene for 16S rRNA, partial se...    32   2.5    3
(AB284563) Polistes formosanus gene for 16S rRNA, partial se...    32   2.6    3
(FB571370) Sequence 237 from Patent EP1865317.                     32   2.6    9
(DQ107351) Leishmania major strain MHOM/IL/2003/LRC-L952 max...    36   2.6    3
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    36   2.7    13
(CR450793) Zebrafish DNA sequence from clone DKEY-48M5 in li...    38   2.7    7
(BY889720) Cryptomeria japonica cDNA clone: CMFL033_H21, 5'e...    42   2.7    2
(CS468878) Sequence 69 from Patent EP1748080.                      34   2.7    14
(CS419355) Sequence 69 from Patent WO2006094836.                   34   2.7    14
(AC182652) Populus trichocarpa clone Pop1-120B14, complete s...    36   2.7    7
(AF083031) Guillardia theta nucleomorph chromosome 3, comple...    32   2.7    10
(DN859884) nab04a01.y1 Zebrafish lens. Unnormalized (nab) Da...    32   2.8    3
(C90722) Dictyostelium discoideum slug cDNA, clone SSJ870.         44   2.8    2
(EK467691) 1095469432435 Global-Ocean-Sampling_GS-32-01-01-1...    36   2.8    3
(DY683264) TTEA360T1V Tetrahymena thermophila EST library, c...    34   2.8    3
(C91109) Dictyostelium discoideum slug cDNA, clone SSJ582.         32   2.9    3
(AM446476) Vitis vinifera contig VV78X257381.17, whole genom...    34   2.9    3
(CR792459) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    38   2.9    10
(AC215398) Solanum lycopersicum chromosome 2 clone C02HBa015...    34   2.9    11
(U87145) Toxoplasma gondii chloroplast, complete genome.           40   2.9    5
(BX957225) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   3.0    9
(CR068281) Reverse strand read from insert in 5'HPRT inserti...    38   3.0    3
(BX962905) Reverse strand read from insert in 5'HPRT inserti...    38   3.0    3
(BH164062) ENTSJ74TF Entamoeba histolytica Sheared DNA Entam...    36   3.0    3
(DX095528) AU_BAC007B1D01_T7 CHORI212 Ictalurus punctatus ge...    38   3.1    2
(C90542) Dictyostelium discoideum slug cDNA, clone SSI702.         44   3.1    2
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s...    34   3.1    10
(CG767277) TcB43.2_A07_T7 Tribolium BAC library Tribolium ca...    36   3.1    3
(FI501180) AHT1B5RGH006-B14TP AHT1BS-Rearray Arachis hypogae...    42   3.1    2
(AC216686) Populus trichocarpa clone POP077-C21, complete se...    32   3.1    6
(CU855878) Zebrafish DNA sequence from clone CH73-113N5 in l...    36   3.1    8
(AC013777) Homo sapiens clone RP11-12D3, WORKING DRAFT SEQUE...    46   3.1    8
(CT051234) Sus scrofa genomic clone PigE-220M8, genomic surv...    42   3.2    2
(EF151845) Aerochoreutes carlinianus cytochrome oxidase subu...    38   3.2    2
(CR376798) Zebrafish DNA sequence from clone DKEY-78N18 in l...    38   3.2    7
(CP000361) Arcobacter butzleri RM4018, complete genome.            38   3.2    19
(DX101779) AU_BAC030B2G12_T7 CHORI212 Ictalurus punctatus ge...    38   3.2    2
(AM285305) Spiroplasma citri GII3-3X chromosome, contig Cont...    34   3.2    10
(AM626161) Entamoeba dispar GSS, clone dispar124b02.q1k.           34   3.2    3
(C93145) Dictyostelium discoideum slug cDNA, clone SSM679.         44   3.2    2
(AC176714) Strongylocentrotus purpuratus clone R3-3095H11, W...    42   3.3    6
(EU644601) Conopomorpha cramerella isolate CPB.066 cytochrom...    38   3.3    2
(EU644600) Conopomorpha cramerella isolate CPB.063 cytochrom...    38   3.3    2
(EU644599) Conopomorpha cramerella isolate CPB.038 cytochrom...    38   3.3    2
(EU644598) Conopomorpha cramerella isolate CPB.033 cytochrom...    38   3.3    2
(EU644597) Conopomorpha cramerella isolate CPB.040 cytochrom...    38   3.3    2
(EU644596) Conopomorpha cramerella isolate CPB.053 cytochrom...    38   3.3    2
(EU644595) Conopomorpha cramerella isolate CPB.048 cytochrom...    38   3.3    2
(EU644594) Conopomorpha cramerella isolate CPB.060 cytochrom...    38   3.3    2
(EU644593) Conopomorpha cramerella isolate CPB.046 cytochrom...    38   3.3    2
(EU644592) Conopomorpha cramerella isolate CPB.050 cytochrom...    38   3.3    2
(EU644591) Conopomorpha cramerella isolate CPB.042 cytochrom...    38   3.3    2
(EU644590) Conopomorpha cramerella isolate CPB.081 cytochrom...    38   3.3    2
(EU644588) Conopomorpha cramerella isolate CPB.037 cytochrom...    38   3.3    2
(EU644587) Conopomorpha cramerella isolate CPB.062 cytochrom...    38   3.3    2
(EU644586) Conopomorpha cramerella isolate CPB.100 cytochrom...    38   3.3    2
(EU644585) Conopomorpha cramerella isolate CPB.124 cytochrom...    38   3.3    2
(EU644584) Conopomorpha cramerella isolate CPB.125 cytochrom...    38   3.3    2
(EU644583) Conopomorpha cramerella isolate CPB.134 cytochrom...    38   3.3    2
(EU644582) Conopomorpha cramerella isolate CPB.133 cytochrom...    38   3.3    2
(EU644581) Conopomorpha cramerella isolate CPB.126 cytochrom...    38   3.3    2
(EU644580) Conopomorpha cramerella isolate CPB.136 cytochrom...    38   3.3    2
(EU644579) Conopomorpha cramerella isolate CPB.099 cytochrom...    38   3.3    2
(EU644578) Conopomorpha cramerella isolate CPB.097 cytochrom...    38   3.3    2
(EU644577) Conopomorpha cramerella isolate CPB.123 cytochrom...    38   3.3    2
(EU644576) Conopomorpha cramerella isolate CPB.018 cytochrom...    38   3.3    2
(EU644575) Conopomorpha cramerella isolate CPB.002 cytochrom...    38   3.3    2
(EU644574) Conopomorpha cramerella isolate CPB.010 cytochrom...    38   3.3    2
(EU644573) Conopomorpha cramerella isolate CPB.001 cytochrom...    38   3.3    2
(EU644572) Conopomorpha cramerella isolate CPB.009 cytochrom...    38   3.3    2
(EU644571) Conopomorpha cramerella isolate CPB.004 cytochrom...    38   3.3    2
(EU644570) Conopomorpha cramerella isolate CPB.003 cytochrom...    38   3.3    2
(EU644569) Conopomorpha cramerella isolate CPB.021 cytochrom...    38   3.3    2
(EU644568) Conopomorpha cramerella isolate CPB.005 cytochrom...    38   3.3    2
(EU644567) Conopomorpha cramerella isolate CPB.012 cytochrom...    38   3.3    2
(EU644566) Conopomorpha cramerella isolate CPB.094 cytochrom...    38   3.3    2
(EU644565) Conopomorpha cramerella isolate CPB.095 cytochrom...    38   3.3    2
(EU644564) Conopomorpha cramerella isolate CPB.093 cytochrom...    38   3.3    2
(EU644563) Conopomorpha cramerella isolate CPB.096 cytochrom...    38   3.3    2
(EU644562) Conopomorpha cramerella isolate CPB.014 cytochrom...    38   3.3    2
(EU644561) Conopomorpha cramerella isolate CPB.011 cytochrom...    38   3.3    2
(EU644560) Conopomorpha cramerella isolate CPB.015 cytochrom...    38   3.3    2
(EU644559) Conopomorpha cramerella isolate CPB.016 cytochrom...    38   3.3    2
(EU644558) Conopomorpha cramerella isolate CPB.111 cytochrom...    38   3.3    2
(EU644557) Conopomorpha cramerella isolate CPB.112 cytochrom...    38   3.3    2
(EU644556) Conopomorpha cramerella isolate CPB.109 cytochrom...    38   3.3    2
(EU644555) Conopomorpha cramerella isolate CPB.071 cytochrom...    38   3.3    2
(EU644554) Conopomorpha cramerella isolate CPB.104 cytochrom...    38   3.3    2
(EU644553) Conopomorpha cramerella isolate CPB.101 cytochrom...    38   3.3    2
(EU644552) Conopomorpha cramerella isolate CPB.103 cytochrom...    38   3.3    2
(EU644551) Conopomorpha cramerella isolate CPB.108 cytochrom...    38   3.3    2
(EU644550) Conopomorpha cramerella isolate CPB.105 cytochrom...    38   3.3    2
(EU644549) Conopomorpha cramerella isolate CPB.106 cytochrom...    38   3.3    2
(EU644548) Conopomorpha cramerella isolate CPB.074 cytochrom...    38   3.3    2
(EU644547) Conopomorpha cramerella isolate CPB.068 cytochrom...    38   3.3    2
(EU644546) Conopomorpha cramerella isolate CPB.075 cytochrom...    38   3.3    2
(EU644545) Conopomorpha cramerella isolate CPB.076 cytochrom...    38   3.3    2
(EU644544) Conopomorpha cramerella isolate CPB.073 cytochrom...    38   3.3    2
(EU644543) Conopomorpha cramerella isolate CPB.065 cytochrom...    38   3.3    2
(EU644542) Conopomorpha cramerella isolate CPB.079 cytochrom...    38   3.3    2
(EU644541) Conopomorpha cramerella isolate CPB.077 cytochrom...    38   3.3    2
(EU644540) Conopomorpha cramerella isolate CPB.080 cytochrom...    38   3.3    2
(EU644539) Conopomorpha cramerella isolate CPB.072 cytochrom...    38   3.3    2
(EU644538) Conopomorpha cramerella isolate CPB.069 cytochrom...    38   3.3    2
(EU644537) Conopomorpha cramerella isolate CPB.070 cytochrom...    38   3.3    2
(EU644536) Conopomorpha cramerella isolate CPB.027 cytochrom...    38   3.3    2
(EU644535) Conopomorpha cramerella isolate CPB.006 cytochrom...    38   3.3    2
(EU644534) Conopomorpha cramerella isolate CPB.024 cytochrom...    38   3.3    2
(EU644533) Conopomorpha cramerella isolate CPB.026 cytochrom...    38   3.3    2
(EU644532) Conopomorpha cramerella isolate CPB.088 cytochrom...    38   3.3    2
(EU644531) Conopomorpha cramerella isolate CPB.023 cytochrom...    38   3.3    2
(EU644530) Conopomorpha cramerella isolate CPB.022 cytochrom...    38   3.3    2
(EU644529) Conopomorpha cramerella isolate CPB.031 cytochrom...    38   3.3    2
(EU644528) Conopomorpha cramerella isolate CPB.030 cytochrom...    38   3.3    2
(EU644527) Conopomorpha cramerella isolate CPB.008 cytochrom...    38   3.3    2
(EU644526) Conopomorpha cramerella isolate CPB.007 cytochrom...    38   3.3    2
(EU644525) Conopomorpha cramerella isolate CPB.083 cytochrom...    38   3.3    2
(EU644523) Conopomorpha cramerella isolate CPB.085 cytochrom...    38   3.3    2
(EU644522) Conopomorpha cramerella isolate CPB.082 cytochrom...    38   3.3    2
(EU644521) Conopomorpha cramerella isolate CPB.102 cytochrom...    38   3.3    2
(EU644520) Conopomorpha cramerella isolate CPB.098 cytochrom...    38   3.3    2
(EU644519) Conopomorpha cramerella isolate CPB.086 cytochrom...    38   3.3    2
(EU644518) Conopomorpha cramerella isolate CPB.087 cytochrom...    38   3.3    2
(EU644517) Conopomorpha cramerella isolate CPB.092 cytochrom...    38   3.3    2
(EU644516) Conopomorpha cramerella isolate CPB.090 cytochrom...    38   3.3    2
(EU644515) Conopomorpha cramerella isolate CPB.089 cytochrom...    38   3.3    2
(EU644514) Conopomorpha cramerella isolate CPB.091 cytochrom...    38   3.3    2
(EU644513) Conopomorpha cramerella isolate CPB.078 cytochrom...    38   3.3    2
(EU644512) Conopomorpha cramerella isolate CPB.067 cytochrom...    38   3.3    2
(EU644511) Conopomorpha cramerella isolate CPB.058 cytochrom...    38   3.3    2
(EU644510) Conopomorpha cramerella isolate CPB.056 cytochrom...    38   3.3    2
(AC230303) Bos taurus clone CH240-513H18, WORKING DRAFT SEQU...    44   3.3    6
(AC171940) Bos taurus clone CH240-197F8, WORKING DRAFT SEQUE...    38   3.3    6
(CU929810) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   3.4    8
(CR626874) Zebrafish DNA sequence from clone CH211-219H2 in ...    44   3.4    6
(BY895726) Cryptomeria japonica cDNA clone: CMFL049_P23, 5'e...    42   3.4    2
(AX345961) Sequence 1032 from Patent WO0200928.                    36   3.4    4
(AL844501) Plasmodium falciparum strain 3D7, chromosome 1.         34   3.5    15
(AX344551) Sequence 2 from Patent WO0200932.                       32   3.5    15
(AC190204) Pan troglodytes BAC clone CH251-637M16 from chrom...    34   3.5    9
(EU427346) Yemmalysus parallelus mitochondrion, complete gen...    32   3.5    4
(AX345526) Sequence 597 from Patent WO0200928.                     32   3.6    6
(AC021833) Homo sapiens chromosome 2 clone RP11-553L19 map 2...    36   3.6    6
(DE245102) Trifolium pratense DNA, clone:RC0277r.ab1.              36   3.6    2

>(AC116919) Dictyostelium discoideum chromosome 2 map
            complement(6245035-6206343) strain AX4, complete
            sequence.
          Length = 38692

 Score = 2141 bits (1080), Expect = 0.0
 Identities = 1080/1080 (100%)
 Strand = Plus / Plus


Query: 215  ggatggtcaagacaaccctatttaaagtataacccagaacaattatcaaaatttagaaaa 274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240  ggatggtcaagacaaccctatttaaagtataacccagaacaattatcaaaatttagaaaa 299


Query: 275  tcatttagattaaaagaatggaattattactcaattggatccaatagtttttattttgca 334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300  tcatttagattaaaagaatggaattattactcaattggatccaatagtttttattttgca 359


Query: 335  gttgtcgctattgatctaggttatgcatgtatttatcaatgttttttcattgattttgaa 394
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360  gttgtcgctattgatctaggttatgcatgtatttatcaatgttttttcattgattttgaa 419


Query: 395  aaggattataaaaatttaaatgaaaatcaaccacaacaaccatcagaaccatcagattat 454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420  aaggattataaaaatttaaatgaaaatcaaccacaacaaccatcagaaccatcagattat 479


Query: 455  attatggatgaaattagatttgcaacaccattctcaaaaggattatgtttaccatcagat 514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480  attatggatgaaattagatttgcaacaccattctcaaaaggattatgtttaccatcagat 539


Query: 515  agctgtgaacatggttgtcatacaaaatatgattcaaataacttttcaattgaatttaat 574
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540  agctgtgaacatggttgtcatacaaaatatgattcaaataacttttcaattgaatttaat 599


Query: 575  tcaatttgtagtgaacatcttaataaagatgatgaaagtagtgatagtaataataataat 634
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600  tcaatttgtagtgaacatcttaataaagatgatgaaagtagtgatagtaataataataat 659


Query: 635  tcaaaaattaaacatcatattaaattttatagtaaaaagggtcaacttgaaggtgatata 694
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660  tcaaaaattaaacatcatattaaattttatagtaaaaagggtcaacttgaaggtgatata 719


Query: 695  gtatttgatttatcaccaactagagaatcaattgtattgatgacaccaattggtaaagag 754
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720  gtatttgatttatcaccaactagagaatcaattgtattgatgacaccaattggtaaagag 779


Query: 755  aatttctactataatagaaaaacaaatttgataccagttggtggtagtttaaaagttaaa 814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780  aatttctactataatagaaaaacaaatttgataccagttggtggtagtttaaaagttaaa 839


Query: 815  ggtgtagaacaattaaatggtgacatcaattcaattgcaaatgattgttttggtattatg 874
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840  ggtgtagaacaattaaatggtgacatcaattcaattgcaaatgattgttttggtattatg 899


Query: 875  gattggggtagaggtatttgggaatataatagcttttggttatggtcatctgcttggggt 934
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900  gattggggtagaggtatttgggaatataatagcttttggttatggtcatctgcttggggt 959


Query: 935  aaagtcgatggaattccagttggtttaaattttggatctggttttggtgatctttcaact 994
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960  aaagtcgatggaattccagttggtttaaattttggatctggttttggtgatctttcaact 1019


Query: 995  catactgaaaatggagtaaatgtgaatggaatcgtccataaattaggtcatgtagatata 1054
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 catactgaaaatggagtaaatgtgaatggaatcgtccataaattaggtcatgtagatata 1079


Query: 1055 gaatacaatgaatcaaacctaatggaaccttggaaattcatttgtaagcatggtagattt 1114
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 gaatacaatgaatcaaacctaatggaaccttggaaattcatttgtaagcatggtagattt 1139


Query: 1115 ggtgaacaacctctcatctttactccattcaaaaagaagtatgataataatgatttcacc 1174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 ggtgaacaacctctcatctttactccattcaaaaagaagtatgataataatgatttcacc 1199


Query: 1175 gttttcatttcaagttttcatcaaattcttggtacttttactggtgaaatcattttagat 1234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 gttttcatttcaagttttcatcaaattcttggtacttttactggtgaaatcattttagat 1259


Query: 1235 gatggtagtagattaaaaataaatttaattggcttctctgaagttcataaagcaagatgg 1294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 gatggtagtagattaaaaataaatttaattggcttctctgaagttcataaagcaagatgg 1319

 Score = 36.2 bits (18), Expect(5) = 4.0
 Identities = 18/18 (100%)
 Strand = Plus / Minus


Query: 634   ttcaaaaattaaacatca 651
             ||||||||||||||||||
Sbjct: 20804 ttcaaaaattaaacatca 20787

 Score = 32.2 bits (16), Expect(5) = 4.0
 Identities = 16/16 (100%)
 Strand = Plus / Minus


Query: 1249 aaaaataaatttaatt 1264
            ||||||||||||||||
Sbjct: 2635 aaaaataaatttaatt 2620

 Score = 32.2 bits (16), Expect(5) = 4.0
 Identities = 22/24 (91%)
 Strand = Plus / Minus


Query: 554   aacttttcaattgaatttaattca 577
             |||||||||||||| || ||||||
Sbjct: 25226 aacttttcaattgatttcaattca 25203

 Score = 26.3 bits (13), Expect(5) = 4.0
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 624   ataataataattc 636
             |||||||||||||
Sbjct: 21551 ataataataattc 21539

 Score = 26.3 bits (13), Expect(5) = 4.0
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 422   caaccacaacaac 434
             |||||||||||||
Sbjct: 37286 caaccacaacaac 37274

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,881,627,989
Number of extensions: 129479159
Number of successful extensions: 14796068
Number of sequences better than 10.0: 944
Length of query: 1394
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1370
Effective length of database: 99,340,224,878
Effective search space: 136096108082860
Effective search space used: 136096108082860
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U03165-1 (Contig-U03165-1Q) /CSM_Contig/Contig-U03165-1Q.Seq.d
         (1394 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AP008957_1511(AP008957|pid:none) Rhodococcus erythropolis PR4 DN...   162   2e-38
CP000774_415(CP000774|pid:none) Parvibaculum lavamentivorans DS-...   162   2e-38
CP000885_1290(CP000885|pid:none) Clostridium phytofermentans ISD...   157   7e-37
CP000777_109(CP000777|pid:none) Leptospira biflexa serovar Patoc...   134   1e-29
CP001083_1431(CP001083|pid:none) Clostridium botulinum Ba4 str. ...   118   6e-25
CP000939_1426(CP000939|pid:none) Clostridium botulinum B1 str. O...   114   6e-24
AM412317_1389(AM412317|pid:none) Clostridium botulinum A str. AT...   114   8e-24
CP000726_1343(CP000726|pid:none) Clostridium botulinum A str. AT...   114   8e-24
CP000962_1453(CP000962|pid:none) Clostridium botulinum A3 str. L...   114   8e-24
CP000812_1924(CP000812|pid:none) Thermotoga lettingae TMO, compl...   113   1e-23
AE010300_3830(AE010300|pid:none) Leptospira interrogans serovar ...   110   2e-22
CP000817_841(CP000817|pid:none) Lysinibacillus sphaericus C3-41,...   108   5e-22
BA000032_1098(BA000032|pid:none) Vibrio parahaemolyticus RIMD 22...    86   3e-15
AM286690_1789(AM286690|pid:none) Alcanivorax borkumensis SK2, co...    85   5e-15
CP000859_1049(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ...    85   7e-15
CP000509_4452(CP000509|pid:none) Nocardioides sp. JS614, complet...    83   3e-14
CP000790_1423(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch...    80   2e-13
FM954972_1614(FM954972|pid:none) Vibrio splendidus LGP32 chromos...    80   2e-13
CP000444_810(CP000444|pid:none) Shewanella sp. MR-7, complete ge...    78   7e-13
CP000446_3139(CP000446|pid:none) Shewanella sp. MR-4, complete g...    78   7e-13
CP000469_781(CP000469|pid:none) Shewanella sp. ANA-3, complete g...    77   1e-12
CP000514_2306(CP000514|pid:none) Marinobacter aquaeolei VT8, com...    77   1e-12
CP000447_3085(CP000447|pid:none) Shewanella frigidimarina NCIMB ...    76   3e-12
AE014299_3701(AE014299|pid:none) Shewanella oneidensis MR-1, com...    76   3e-12
CP000681_818(CP000681|pid:none) Shewanella putrefaciens CN-32, c...    75   7e-12
CP000503_3310(CP000503|pid:none) Shewanella sp. W3-18-1, complet...    75   7e-12
CP001252_3465(CP001252|pid:none) Shewanella baltica OS223, compl...    73   3e-11
CP000753_3547(CP000753|pid:none) Shewanella baltica OS185, compl...    72   5e-11
CP000438_1655(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA...    70   1e-10
FM209186_1723(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c...    70   1e-10
AE004091_3342(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co...    70   1e-10
CP000744_4612(CP000744|pid:none) Pseudomonas aeruginosa PA7, com...    67   2e-09
CP000507_2541(CP000507|pid:none) Shewanella amazonensis SB2B, co...    66   3e-09
CP000851_3096(CP000851|pid:none) Shewanella pealeana ATCC 700345...    64   1e-08
CP000821_3429(CP000821|pid:none) Shewanella sediminis HAW-EB3, c...    64   1e-08
CP000113_6656(CP000113|pid:none) Myxococcus xanthus DK 1622, com...    64   2e-08
CP000438_4267(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA...    59   3e-07
A83539(A83539) hypothetical protein PA0855 [imported] - Pseudomo...    59   3e-07
CP000961_3600(CP000961|pid:none) Shewanella woodyi ATCC 51908, c...    59   6e-07
CP000323_1582(CP000323|pid:none) Psychrobacter cryohalolentis K5...    56   3e-06
CP000680_1679(CP000680|pid:none) Pseudomonas mendocina ymp, comp...    56   4e-06
CP000931_3163(CP000931|pid:none) Shewanella halifaxensis HAW-EB4...    55   5e-06
CR543861_573(CR543861|pid:none) Acinetobacter sp. ADP1 complete ...    53   3e-05
AE010300_536(AE010300|pid:none) Leptospira interrogans serovar l...    49   4e-04
CP000551_993(CP000551|pid:none) Prochlorococcus marinus str. AS9...    35   5.0
AC116305_71(AC116305|pid:none) Dictyostelium discoideum chromoso...    35   8.5

>AP008957_1511(AP008957|pid:none) Rhodococcus erythropolis PR4 DNA,
            complete genome.
          Length = 339

 Score =  162 bits (411), Expect = 2e-38
 Identities = 117/384 (30%), Positives = 175/384 (45%), Gaps = 11/384 (2%)
 Frame = +2

Query: 176  GELLDENGILKIKGWSRQPYLKYNPEQLSKFRKS------FRLKEWNYYSIGSNSFYFAV 337
            G LLD+ G L   GW+        P ++ K+R+S      FR+KEW+YY + +  +  A+
Sbjct: 8    GPLLDDRGHLVETGWA--------PSEIRKYRRSAITAPKFRIKEWDYYCVLTADYGIAL 59

Query: 338  VAIDLGYACIYQCFFIDFEKDYKNLNENQPQQPSEPSDYIMDEIRFATPFSKGLCLPSDS 517
               D GY  +    ++DF            + P E ++ +M       PF  G     +S
Sbjct: 60   TVADNGYMGLLGVSWLDF------------RTPHEITENVM------LPFPMGRLGLPES 101

Query: 518  CEHGCHTKYDSNNFSIEFNSICS-EHLXXXXXXXXXXXXXXXXXXXXXFYSKKGQLEGDI 694
             + G            EF  +    HL                     F   +G L  D+
Sbjct: 102  ADDG-DVVVSKGKARFEFRHVDGGRHLIVDYPA---------------FDGGRG-LHADL 144

Query: 695  VFDLSPTRESIVLMTPIGK--ENFYYNRKTNLIPVGGSLKVKGVEQLNGDINSIANDCFG 868
             F   P  + +V+ TP  K   +FYYN+K N +P  G++++      + D    + D FG
Sbjct: 145  -FLAGPVDDRMVIATPFPKASRSFYYNQKINCLPAAGTVRIG-----SDDFTFRSEDSFG 198

Query: 869  IMDWGRGIWEYNSFWLWSSAWGKVDGIPVGLNFGSGFGDLSTHTENGVNVNGIVHKLGHV 1048
            ++DWGRG+W Y++ W W SA G V+G   G N G GFGD    +EN V V G  HKL  +
Sbjct: 199  VLDWGRGVWTYDNTWYWGSASGLVNGERFGFNIGYGFGDTRAASENIVFVGGRAHKLDRI 258

Query: 1049 DIEYNESNL-MEPWKFICKHGRFGEQPLIFTPFKKKYDNNDFTVFISSFHQILGTFTGEI 1225
            D +  +      PW F    GRFG   + F P   +    D  V  S  HQ+ G F+G +
Sbjct: 259  DFDIPQGTYDGAPWNFSSNDGRFG---MTFEPIIDRAATFDVGVLRSIQHQVFGKFSGTV 315

Query: 1226 ILDDGSRLKI-NLIGFSEVHKARW 1294
            ILDDG+ + + +L+GF+E  + RW
Sbjct: 316  ILDDGTSVVVRDLLGFAEEVRNRW 339

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,792,190,048
Number of extensions: 34369089
Number of successful extensions: 99276
Number of sequences better than 10.0: 46
Number of HSP's gapped: 98922
Number of HSP's successfully gapped: 57
Length of query: 464
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 332
Effective length of database: 623,955,076
Effective search space: 207153085232
Effective search space used: 207153085232
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.80  gvh: 0.43  alm: 0.17  top: 0.50  tms: 0.07  mit: 0.32  mip: 0.07
 nuc: 0.06  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 20.0 %: mitochondrial
	 20.0 %: cytoplasmic
	 12.0 %: nuclear
	  8.0 %: Golgi
	  8.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U03165-1 is end