Contig-U16043-1 |
Contig ID |
Contig-U16043-1 |
Contig update |
2004. 6.11 |
Contig sequence |
|
Gap |
gap included |
Contig length |
1061 |
Chromosome number (1..6, M) |
4 |
Chromosome length |
5430582 |
Start point |
1972150 |
End point |
1973211 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
10 |
Number of EST |
12 |
Link to clone list |
U16043 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.23 |
Homology vs CSM-cDNA |
|
dna update |
2009. 3. 8 |
Homology vs DNA |
Query= Contig-U16043-1 (Contig-U16043-1Q) /CSM_Contig/Contig-U16043-1Q.Seq.d (1071 letters)
Database: ddbj_B 98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ347596) Dictyostelium discoideum cDNA clone:dda27g13, 3' ... 1126 0.0 5 (BJ346488) Dictyostelium discoideum cDNA clone:dda24h04, 3' ... 1124 0.0 5 (BJ429714) Dictyostelium discoideum cDNA clone:ddv4k15, 3' e... 1082 0.0 6 (BJ402575) Dictyostelium discoideum cDNA clone:dds17k07, 3' ... 1082 0.0 5 (BJ375230) Dictyostelium discoideum cDNA clone:ddc17o21, 3' ... 1059 0.0 3 (BJ401353) Dictyostelium discoideum cDNA clone:dds23a02, 3' ... 1041 0.0 3 (C23846) Dictyostelium discoideum gamete cDNA, clone FCL-AC23. 874 0.0 1 (BJ398338) Dictyostelium discoideum cDNA clone:dds12f04, 3' ... 656 0.0 1 (AU265610) Dictyostelium discoideum vegetative cDNA clone:VS... 636 e-178 1 (AU033494) Dictyostelium discoideum slug cDNA, clone SLA895. 446 e-121 1 (AU265611) Dictyostelium discoideum vegetative cDNA clone:VS... 293 e-101 2 (AU037201) Dictyostelium discoideum slug cDNA, clone SSB604. 353 9e-93 1 (AU071472) Dictyostelium discoideum slug cDNA, clone SSB604. 151 3e-89 3 (EE009871) ROE00004945 Rhizopus oryzae Company Rhizopus oryz... 121 6e-56 6 (FC776657) CBGB628.fwd CBGB Lottia gigantea 3,6,9,12h embryo... 94 3e-47 5 (FE249337) CAPH2218.rev CAPH Naegleria gruberi amoeba stage ... 94 4e-47 6 (EH701097) CCIS13217.b1_B17.ab1 CCI(LMS) chicory Cichorium i... 113 5e-45 5 (FC814580) Sr_pASP6_018f15_SP6 S. ratti mixed stage pAMP Str... 111 3e-44 6 (FC813683) Sr_pASP6_015c21_SP6 S. ratti mixed stage pAMP Str... 111 3e-44 6 (CZ280781) cp13c12.r Candida parapsilosis Random Genomic Lib... 133 5e-44 4 (CZ284258) cp34d12.r Candida parapsilosis Random Genomic Lib... 133 5e-44 4 (FE265994) CAZO4847.rev CAZO Naegleria gruberi Flagellate St... 94 6e-44 5 (FE252619) CAPH4109.rev CAPH Naegleria gruberi amoeba stage ... 94 6e-44 5 (FE252620) CAPH4109.fwd CAPH Naegleria gruberi amoeba stage ... 94 6e-44 5 (FE247334) CAPG9896.rev CAPG Naegleria gruberi amoeba stage ... 94 7e-44 5 (FE268985) CAZO965.rev CAZO Naegleria gruberi Flagellate Sta... 94 9e-44 5 (BI509603) BB170019A10F05.5 Bee Brain Normalized/Subtracted ... 86 2e-41 4 (BI507586) BB170013B10D07.5 Bee Brain Normalized/Subtracted ... 86 3e-41 5 (BI506653) BB170020B20A08.5 Bee Brain Normalized/Subtracted ... 86 4e-41 5 (CT747984) Paramecium tetraurelia 5-PRIME EST from clone LK0... 105 2e-40 4 (FC811173) Sr_pASP6_06l17_SP6 S. ratti mixed stage pAMP Stro... 119 8e-40 5 (FC811167) Sr_pASP6_06l11_SP6 S. ratti mixed stage pAMP Stro... 119 8e-40 5 (FC811194) Sr_pASP6_06m17_SP6 S. ratti mixed stage pAMP Stro... 119 9e-40 5 (CN755137) ID0AAA15AA04RM1 ApMS Acyrthosiphon pisum cDNA clo... 78 4e-39 6 (EY106261) CAZI4655.rev CAZI Artemisia annua normalized leaf... 94 6e-39 4 (FE233363) CAPG2246.rev CAPG Naegleria gruberi amoeba stage ... 94 8e-39 5 (EY112099) CAZI767.rev CAZI Artemisia annua normalized leaf ... 94 9e-39 4 (EY110164) CAZI666.rev CAZI Artemisia annua normalized leaf ... 94 9e-39 4 (EY105674) CAZI436.rev CAZI Artemisia annua normalized leaf ... 94 1e-38 4 (FD461311) LARVL07TF Haematobia irritans 1st Instar Larvae H... 121 3e-38 4 (FE244030) CAPG7973.rev CAPG Naegleria gruberi amoeba stage ... 94 3e-38 5 (FE243866) CAPG7879.rev CAPG Naegleria gruberi amoeba stage ... 94 3e-38 5 (AY750868) Toxoptera citricida putative 26S protease regulat... 78 9e-38 5 (EY112100) CAZI767.fwd CAZI Artemisia annua normalized leaf ... 94 8e-37 3 (EY110165) CAZI666.fwd CAZI Artemisia annua normalized leaf ... 94 8e-37 3 (EY075305) CAZI11714.fwd CAZI Artemisia annua normalized lea... 94 8e-37 3 (CB284621) DF1388 Dermatophagoides farinae cDNA library Derm... 113 9e-37 5 (EX148958) ZRA453R ZRA Zoophthora radicans cDNA clone ZRA453... 80 7e-36 4 (BI510050) BB170023B10G11.5 Bee Brain Normalized/Subtracted ... 66 1e-35 5 (FC672726) CAXW8985.fwd CAXW Lottia gigantea from female gon... 94 4e-35 4 (FC704028) CAXY2342.fwd CAXY Lottia gigantea from male gonad... 94 4e-35 3 (BT040193) Zea mays full-length cDNA clone ZM_BFc0070L08 mRN... 76 4e-35 5 (AY105910) Zea mays PCO106969 mRNA sequence. 76 5e-35 5 (BT041454) Zea mays full-length cDNA clone ZM_BFc0061I22 mRN... 76 5e-35 5 (FE267940) CAZO6435.fwd CAZO Naegleria gruberi Flagellate St... 94 2e-34 4 (FE267939) CAZO6435.rev CAZO Naegleria gruberi Flagellate St... 94 2e-34 4 (FE253077) CAPH4346.rev CAPH Naegleria gruberi amoeba stage ... 94 2e-34 4 (EC998323) ROE00014340 Rhizopus oryzae Company Rhizopus oryz... 80 4e-34 3 (CD440167) EL01N0551F03.b Endosperm_5 Zea mays cDNA, mRNA se... 68 1e-33 5 (CT754715) Paramecium tetraurelia 5-PRIME EST from clone LK0... 72 2e-33 4 (CD441712) EL01N0562C09.g Endosperm_5 Zea mays cDNA, mRNA se... 68 2e-33 5 (DY977846) CLSS11619.b1_F01.ab1 CLS(LMS) lettuce sativa Lact... 113 3e-33 2 (CT747847) Paramecium tetraurelia 5-PRIME EST from clone LK0... 70 5e-33 5 (EU965190) Zea mays clone 284371 unknown mRNA. 68 7e-33 5 (BQ530609) APEX3_33_E09 pSLR Saccharum officinarum cDNA 5', ... 86 9e-33 5 (BT016782) Zea mays clone Contig615 mRNA sequence. 68 9e-33 5 (BQ530379) APEX3_28_A06 pSLR Saccharum officinarum cDNA 5', ... 86 1e-32 5 (FC740049) CBBI11601.rev CBBI Lottia gigantea 26h,37h,61h La... 94 1e-32 4 (FC801324) CBGC4319.rev CBGC Lottia gigantea 15h 18h embryos... 94 1e-32 4 (FC806720) CBGC8466.rev CBGC Lottia gigantea 15h 18h embryos... 94 1e-32 4 (FC730613) CBBG6105.rev CBBG Lottia gigantea 12,15,18h embry... 94 2e-32 4 (FC713437) CAXY834.rev CAXY Lottia gigantea from male gonad ... 94 2e-32 4 (FC672725) CAXW8985.rev CAXW Lottia gigantea from female gon... 94 2e-32 4 (FC776656) CBGB628.rev CBGB Lottia gigantea 3,6,9,12h embryo... 94 2e-32 4 (CO451041) MZCCL10159E07.g Maize Endosperm cDNA Library Zea ... 68 3e-32 5 (DR401955) TKN077D04_631432 Taraxacum kok-saghyz root cDNA l... 90 6e-32 4 (FE306936) CANS2615.rev CANS_Daphnia_pulex_Log50_Library_3 D... 64 1e-31 5 (FF335792) 280461109 Pea aphid whole body normalized full le... 80 2e-31 6 (DW263243) UI-S-GN0-abl-d-22-0-UI.s1 UI-S-GN0 Euprymna scolo... 100 4e-31 3 (EE264073) E07_E07gf2o13_pDNRf_505160 Myzus persicae, line G... 70 4e-31 4 (FG074211) UI-FF-IF0-abi-g-03-0-UI.r1 Ceratitis capitata emb... 70 7e-31 5 (CK811837) Rasgsc7874 Salivary Gland 4th instar 3rd period (... 111 9e-31 4 (CN586539) USDA-FP_129611 Acyrthosiphon pisum, Pea Aphid Acy... 78 1e-30 5 (EX622250) 255417964 Pea aphid whole body normalized full le... 78 1e-30 5 (FF312093) 279384472 Pea aphid whole body normalized full le... 78 1e-30 5 (DN315621) PL06021B1B04 cDNA from juvenile hermaphodites Sch... 72 1e-30 4 (FF298442) 279319272 Pea aphid whole body normalized full le... 78 1e-30 5 (EL578085) Physarum00914 Physarum polycephalum starvation st... 90 3e-30 4 (CO825698) LM_GB5_006024 Locusta migratoria gregarious phase... 70 5e-30 3 (EL484923) CHUM6717.b1_J23.ab1 CHU(LMS) puzzle sunflower Hel... 74 5e-30 5 (CN550770) tad50d02.x1 Hydra EST -Kiel 1 Hydra vulgaris cDNA... 56 5e-30 5 (FL006908) 15184984 CERES-CR1 Zea mays cDNA clone 1484555 5'... 68 8e-30 4 (EX149348) ZRB351R ZRB Zoophthora radicans cDNA clone ZRB351... 80 8e-30 3 (DV743141) ID0AFF9AD06CM1 ID0AFF Acyrthosiphon pisum cDNA cl... 78 9e-30 4 (DN230730) MEST1085_A02.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mR... 68 1e-29 4 (DN219048) MEST1075_F11.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mR... 68 1e-29 4 (DN559322) ME20-B11-T3-96-R1 E7PCR Zea mays cDNA clone E7PCR... 68 1e-29 4 (CN757757) ID0AAA20BE05RM1 ApMS Acyrthosiphon pisum cDNA clo... 78 2e-29 5 (DW264016) UI-S-GN0-abm-k-12-0-UI.s1 UI-S-GN0 Euprymna scolo... 94 2e-29 3 (DR399043) TKN096H02_634942 Taraxacum kok-saghyz root cDNA l... 90 7e-29 3 (EH789214) CNSS29256.b1_O17.ab1 CNS(LMS) yellow starthistle ... 74 1e-28 3 (EH764162) CNSM10171.b1_F23.ab1 CNS(LMS) yellow starthistle ... 74 1e-28 3 (EH769196) CNSM1806.b1_K20.ab1 CNS(LMS) yellow starthistle C... 74 1e-28 3 (EH766119) CNSM12446.b1_L15.ab1 CNS(LMS) yellow starthistle ... 74 1e-28 3 (EH781510) CNSS20348.b1_H24.ab1 CNS(LMS) yellow starthistle ... 74 1e-28 3 (EG713191) Os6CPREST1117 6cm rice panicles Oryza sativa Japo... 60 1e-28 5 (GE547466) CCHS6347.b1_E04.ab1 CCHS Espina Barnadesia spinos... 90 2e-28 5 (BW643807) Dugesia ryukyuensis mRNA, clone: Dr_sW_028_H19, 5... 80 2e-28 5 (AW255473) ML497 peppermint glandular trichome Mentha x pipe... 98 2e-28 3 (GE545660) CCHS4602.b1_D24.ab1 CCHS Espina Barnadesia spinos... 90 3e-28 5 (L16579) Dictyostelium discoideum HIV1 TAT-binding protein h... 84 3e-28 5 (EY105675) CAZI436.fwd CAZI Artemisia annua normalized leaf ... 94 6e-28 2 (FC814902) Sr_pAMT7_01i16_T7 S. ratti mixed stage pAMP Stron... 119 8e-28 2 (AX654156) Sequence 4026 from Patent WO03000898. 60 1e-27 5 (CU399679) Eucalyptus gunnii EST from cold-acclimated leaves... 96 2e-27 4 (CU399685) Eucalyptus gunnii EST from cold-acclimated leaves... 96 2e-27 4 (EX630443) 255474710 Pea aphid whole body normalized full le... 60 2e-27 6 (AJ804570) Antirrhinum majus EST, clone 018_5_10_f11. 82 2e-27 3 (EE026793) ZM_BFc0084E06.f ZM_BFc Zea mays cDNA clone ZM_BFc... 86 2e-27 5 (DW285542) UI-S-GU1-aee-g-01-0-UI.s1 UI-S-GU1 Euprymna scolo... 60 3e-27 4 (CT832918) Oryza sativa (indica cultivar-group) cDNA clone:O... 60 3e-27 5 (DN216025) MEST1027_H08.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mR... 86 3e-27 5 (CK347524) zmrsub1_0A20-005-e12.s3 zmrsub1 Zea mays cDNA 3',... 86 3e-27 5 (DN231042) MEST1056_A04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mR... 86 4e-27 5 (EE165786) ZM_BFc0138H08.f ZM_BFc Zea mays cDNA clone ZM_BFc... 86 4e-27 5 (EE154581) ZM_BFc0117B16.f ZM_BFc Zea mays cDNA clone ZM_BFc... 86 4e-27 5 (DR021642) STRS1_46_B10.b1_A034 Shoot tip pitch canker susce... 72 4e-27 4 (CO439614) MZCCL10009B03.g Maize Endosperm cDNA Library Zea ... 86 5e-27 5 (CF036165) QCG28d10.yg QCG Zea mays cDNA clone QCG28d10, mRN... 86 8e-27 5 (FK909761) EST_lsal_evj_949925 lsalevj mixed_tissue_mixed_st... 56 9e-27 6 (FF559062) MUSLI15TF MUSL Musa acuminata cDNA 5', mRNA seque... 58 1e-26 5 (FC734407) CBBG8965.fwd CBBG Lottia gigantea 12,15,18h embry... 88 1e-26 2 (BJ430546) Dictyostelium discoideum cDNA clone:ddv7l16, 3' e... 76 1e-26 5 (FC713438) CAXY834.fwd CAXY Lottia gigantea from male gonad ... 88 1e-26 2 (CU399496) Eucalyptus gunnii EST from cold-acclimated leaves... 103 1e-26 3 (EY075304) CAZI11714.rev CAZI Artemisia annua normalized lea... 94 2e-26 3 (FK909760) EST_lsal_evj_933797 lsalevj mixed_tissue_mixed_st... 56 2e-26 6 (BI674586) 949022D03.x2 949 - Juvenile leaf and shoot cDNA f... 86 2e-26 5 (EC924326) WIN025.TB24.1_A16 Cab Sauv flower, leaf and root ... 84 3e-26 3 (EH728025) CNMM14472.b1_O18.ab1 CNM(LMS) spotted knapweed Ce... 74 3e-26 3 (EH727185) CNMM13621.b1_J21.ab1 CNM(LMS) spotted knapweed Ce... 74 3e-26 3 (EH744203) CNMS3890.b1_C13.ab1 CNM(LMS) spotted knapweed Cen... 74 3e-26 3 (BM169926) EST572449 PyBS Plasmodium yoelii yoelii cDNA clon... 74 3e-26 5 (DQ246109) Zea mays clone 18880 mRNA sequence. 86 3e-26 5 (BT034485) Zea mays full-length cDNA clone ZM_BFc0173K19 mRN... 86 4e-26 5 (BT040935) Zea mays full-length cDNA clone ZM_BFc0153O22 mRN... 86 4e-26 5 (EH632528) EST3635 LK04 Laupala kohalensis cDNA clone 106102... 80 4e-26 4 (BT043367) Zea mays full-length cDNA clone ZM_BFc0172C18 mRN... 86 4e-26 5 (CA264818) SCAGRT3046H12.g RT3 Saccharum officinarum cDNA cl... 70 4e-26 3 (EY148437) CBTN11266.g1_D09.ab1:P Triphysaria pusilla root t... 94 5e-26 5 (FL315144) 3499721 CERES-264 Zea mays cDNA clone 689659 5', ... 86 6e-26 4 (BQ530726) APEX3_41_F07 pSLR Saccharum officinarum cDNA 5', ... 86 6e-26 4 (BQ530988) APEX3_40_E01 pSLR Saccharum officinarum cDNA 5', ... 86 6e-26 4 (BQ530532) APEX3_29_F01 pSLR Saccharum officinarum cDNA 5', ... 86 6e-26 4 (BQ531808) APEX3_31_C03 pSLR Saccharum officinarum cDNA 5', ... 86 6e-26 4 (CA162204) SCQSRZ3038F04.g RZ3 Saccharum officinarum cDNA cl... 70 6e-26 3 (BQ529938) APEX3_22_F04 pSLR Saccharum officinarum cDNA 5', ... 86 6e-26 4 (EE462868) BNSCS2CT_UP_002_F04_05JAN2005_022 Brassica napus ... 74 7e-26 3 (BQ966728) QHB27L08.yg.ab1 QH_ABCDI sunflower RHA801 Heliant... 74 7e-26 4 (EE561094) BNZB_UP_066_B04_14MAY2004_030 Brassica napus BNZB... 74 7e-26 3 (CA253333) SCJLFL4099F01.g FL4 Saccharum officinarum cDNA cl... 86 9e-26 4 (BM168249) EST570772 PyBS Plasmodium yoelii yoelii cDNA clon... 74 9e-26 5 (EE094156) S7B05821 Berries 14mm with GA3 (VvS7) Vitis vinif... 84 1e-25 3 (CA144678) SCSFRT2069D01.g RT2 Saccharum officinarum cDNA cl... 86 1e-25 4 (EE174921) ZM_BFc0153O22.f ZM_BFc Zea mays cDNA clone ZM_BFc... 86 1e-25 4 (CA153567) SCUTRZ2024D12.g RZ2 Saccharum officinarum cDNA cl... 86 1e-25 4 (DN207188) MEST845_B03.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRN... 86 1e-25 4 (EE187649) ZM_BFc0173K19.f ZM_BFc Zea mays cDNA clone ZM_BFc... 86 1e-25 4 (DN208522) MEST870_H06.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRN... 86 1e-25 4 (CF037104) QCG40f09.yg QCG Zea mays cDNA clone QCG40f09, mRN... 86 1e-25 4 (BQ969751) QHB39H03.yg.ab1 QH_ABCDI sunflower RHA801 Heliant... 74 1e-25 4 (C92801) Dictyostelium discoideum slug cDNA, clone SSF362. 84 1e-25 4 (FF329817) 280441068 Pea aphid whole body normalized full le... 78 1e-25 4 (GE510355) CCFT7485.g1_J23.ab1 CCF(STU) sunflower Helianthus... 74 1e-25 4 (BJ432198) Dictyostelium discoideum cDNA clone:ddv18b01, 3' ... 84 1e-25 4 (EE186647) ZM_BFc0172C18.f ZM_BFc Zea mays cDNA clone ZM_BFc... 86 2e-25 4 (EX847099) CBNC6726.rev CBNC Phycomyces blakesleeanus NRRL15... 86 2e-25 2 (FC819558) Sr_pAMT7_015c21_T7 S. ratti mixed stage pAMP Stro... 111 2e-25 2 (FC820653) Sr_pAMT7_018f15_T7 S. ratti mixed stage pAMP Stro... 111 2e-25 2 (DR408614) mhn47e03.b1 C.remanei EST SB146 Caenorhabditis re... 64 2e-25 4 (ES622904) NGPP002TR NGPP Nasonia giraulti cDNA, mRNA sequence. 74 2e-25 6 (CD527288) 3529_1_117_1_E06.x_1 3529 - 2 mm ear tissue from ... 86 2e-25 4 (ES622891) NGPEZ76TR NGPA Nasonia giraulti cDNA, mRNA sequence. 74 5e-25 6 (EX196617) SGT20e2_F02 normalized library from a mix of tamm... 94 7e-25 2 (FK918625) EST_lsal_evj_949136 lsalevj mixed_tissue_mixed_st... 56 7e-25 6 (EX199313) SGT20m2_G02 normalized library from a mix of tamm... 94 7e-25 2 (EX203535) SGT20x2_B11 normalized library from a mix of tamm... 94 7e-25 2 (EY172560) CBTI3763.g1_F06.ab1:P Triphysaria pusilla root ti... 94 7e-25 5 (AK065612) Oryza sativa Japonica Group cDNA clone:J013026E01... 60 8e-25 5 (FK919942) EST_lsal_evj_947900 lsalevj mixed_tissue_mixed_st... 56 8e-25 6 (AZ549612) ENTFS50TR Entamoeba histolytica Sheared DNA Entam... 64 8e-25 6 (CF638005) zmrww00_0B20-012-c12.s1 zmrww00 Zea mays cDNA 3',... 68 9e-25 4 (EV435377) 35054_460 Quinqueloculina sp. cDNA library Quinqu... 58 1e-24 5 (CV289687) aof01-16ms4-d07 Aof01 Asparagus officinalis cDNA ... 58 1e-24 4 (FK918624) EST_lsal_evj_941840 lsalevj mixed_tissue_mixed_st... 56 1e-24 6 (FL755415) CCGC6693.g1 CCGC Panicum virgatum early floral bu... 62 2e-24 6 (FE378421) CBNS3272.rev CBNS_Daphnia_pulex_Chosen_One_Librar... 56 2e-24 5 (EL680364) AMM1121 Ammopiptanthus mongolicus leaf cDNA libra... 72 2e-24 4 (BI501899) rm06e11.y1 Meloidogyne arenaria egg pAMP1 v1 Chia... 76 2e-24 3 (FE381612) CBNS694.rev CBNS_Daphnia_pulex_Chosen_One_Library... 56 2e-24 5 (FE381078) CBNS484.rev CBNS_Daphnia_pulex_Chosen_One_Library... 56 3e-24 5 (CN071028) 1021006G08.x4 1021 - Unigene II from Maize Genome... 86 3e-24 4 (ES251901) WS03715.C21_O15 SS-B-N-22 Picea sitchensis cDNA c... 64 4e-24 4 (ES878803) WS02938.CR_M19 SS-IB-A-FL-15 Picea sitchensis cDN... 64 4e-24 4 (FE413036) CBTU3642.fwd CBTU_Daphnia_pulex_Chosen_One_Librar... 58 4e-24 5 (EY806641) CR05-C3-702-067-F12-CT.F Mandarin fruit, developm... 52 5e-24 4 (AM104061) Lutzomyia longipalpis EST clone NSFM-34g08, seque... 58 5e-24 5 (FL808841) CCGG10928.b1 CCGG Panicum virgatum late flowering... 60 5e-24 6 (EE182347) ZM_BFc0165L18.f ZM_BFc Zea mays cDNA clone ZM_BFc... 86 5e-24 4 (EX847100) CBNC6726.fwd CBNC Phycomyces blakesleeanus NRRL15... 76 6e-24 3 (FC816681) Sr_pAMT7_06m17_T7 S. ratti mixed stage pAMP Stron... 74 6e-24 3 (DT649607) ZM_BFb0112H02.f ZM_BFb Zea mays cDNA 3', mRNA seq... 86 6e-24 4 (AM769824) Zostera marina EST, 5'-end sequence, meristematic... 80 8e-24 4 (EY104197) CAZI3595.rev CAZI Artemisia annua normalized leaf... 88 9e-24 2 (EY104371) CAZI3692.rev CAZI Artemisia annua normalized leaf... 84 1e-23 3 (EF085905) Picea sitchensis clone WS0295_I06 unknown mRNA. 64 2e-23 4 (DY925557) CHAY9066.b1_C12.ab1 CHA(XYZ) common wild sunflowe... 66 2e-23 3 (EL478038) CHUL6624.b1_O23.ab1 CHU(LMS) puzzle sunflower Hel... 66 2e-23 3 (FG198348) AGN_PNL227ar1_g2.trimmed.seq AGN_PNL Nicotiana ta... 78 2e-23 3 (FG183719) AGN_PNL207ar1_e1.trimmed.seq AGN_PNL Nicotiana ta... 78 2e-23 3 (FG201717) AGN_PNL231dr1_a4.trimmed.seq AGN_PNL Nicotiana ta... 78 2e-23 3 (CA264126) SCSBLB2038H01.g LB2 Saccharum officinarum cDNA cl... 78 2e-23 4 (EV414739) 210741196 NGP Nasonia giraulti cDNA clone 142C17 ... 74 2e-23 5 (FG851533) UCRVU05_CCNN17489_b1 Cowpea IT84S-2049 Mixed Tiss... 88 3e-23 5 (EV420678) 210788150 NGP Nasonia giraulti cDNA clone 159I15 ... 74 3e-23 5 (DY974582) CLSM8259.b1_E02.ab1 CLS(LMS) lettuce sativa Lactu... 88 3e-23 2 (EY075763) CAZI11957.rev CAZI Artemisia annua normalized lea... 88 3e-23 2 (EY086065) CAZI17194.rev CAZI Artemisia annua normalized lea... 88 3e-23 2 (FF542432) MOPCU11TF MOP Vigna unguiculata cDNA 5', mRNA seq... 88 4e-23 5 (ES625258) NGPQ681TR NGPP Nasonia giraulti cDNA, mRNA sequence. 74 4e-23 5 (BW637021) Dugesia ryukyuensis mRNA, clone: Dr_sW_007_D16, 5... 80 4e-23 4 (FG935318) UCRVU09_CCNT13607_b1 Cowpea UCR 707 Mixed Tissue ... 88 4e-23 5 (FC734321) CBBG8911.fwd CBBG Lottia gigantea 12,15,18h embry... 76 4e-23 2 (CD439103) EL01N0521A03.b Endosperm_5 Zea mays cDNA, mRNA se... 68 4e-23 3 (GE747469) MUS22-N19.y1d-s SHGC-MUS Mytilus californianus cD... 72 5e-23 3 (BM161490) EST564013 PyBS Plasmodium yoelii yoelii cDNA clon... 74 7e-23 4 (CJ358474) Molgula tectiformis cDNA, cleaving embryo clone:m... 62 9e-23 6 (EV178827) 0148918 Brassica napus Etiolated seedlings (pSPOR... 82 9e-23 3 (GE753973) MUS23-A21.y1d-s SHGC-MUS Mytilus californianus cD... 66 1e-22 4 (EX484258) EST_lsal_evj_795072 lsalevj mixed_tissue_mixed_st... 54 1e-22 6 (DY771561) 5TH_new02_M08 Bicyclus anynana wings - 5TH instar... 88 1e-22 2 (EL589598) 65JKBNM0_T3_034_H06_18MAR2005_034 65JKBNM0 Brassi... 82 1e-22 3 (EH689847) CCIM2022.b1_L01.ab1 CCI(LMS) chicory Cichorium in... 80 1e-22 4 (EG606386) KIDNEYF098373I15 POSSUM_01-POSSUM-KIDNEY-2KB Tric... 94 2e-22 2 (EV414557) 210734594 NGP Nasonia giraulti cDNA clone 142C17 ... 74 2e-22 5 (EC285502) BRAINF089553K20 POSSUM_01-POSSUM-C-BRAIN-2KB Tric... 94 2e-22 2 (EC348273) LIVERF089832D21 POSSUM_01-POSSUM-LIVER-2KB Tricho... 94 2e-22 2 (BJ346690) Dictyostelium discoideum cDNA clone:dda24o18, 3' ... 70 2e-22 3 (EX485431) EST_lsal_evj_795665 lsalevj mixed_tissue_mixed_st... 56 2e-22 5 (DY609682) IMMUNEF045823P3 POSSUM_01-C-POSSUM-IMMUNE-2KB Tri... 94 2e-22 2 (EG608361) KIDNEYF101161O7 POSSUM_01-POSSUM-KIDNEY-2KB Trich... 94 2e-22 2 (CX578753) TTE00023572 Amplicon Express - Conjugative Form T... 62 2e-22 3 (FL986643) CCHY18990.g1 CCHY Panicum virgatum callus (N) Pan... 54 2e-22 6 (EX124710) BR108540 mature green leaf cDNA library KHLM Bras... 62 2e-22 3 (EY181486) CBTI818.g1_C13.ab1:P Triphysaria pusilla root tip... 94 2e-22 3 (CT814356) Paramecium tetraurelia 5-PRIME EST from clone LK0... 70 3e-22 5 (EX837207) CBNB6796.rev CBNB Phycomyces blakesleeanus NRRL15... 50 3e-22 4 (ES646096) NVPRF76TR NVPP Nasonia vitripennis cDNA, mRNA seq... 64 4e-22 6 (AM870637) Venerupis (Ruditapes) decussatus EST, 5' end sequ... 70 4e-22 3 (EX837208) CBNB6796.fwd CBNB Phycomyces blakesleeanus NRRL15... 50 4e-22 4 (FE403003) CBTS863.rev CBTS_Daphnia_pulex_Chosen_One_Library... 58 4e-22 5 (EX298421) 1612674_5_B24_096 PY06 Carica papaya cDNA, mRNA s... 86 5e-22 3 (EC590887) 9231 Zea mays embryo sac cDNA library Zea mays cD... 68 5e-22 4 (EL456499) CHTM9561.b1_B16.ab1 CHT(LMS) Jerusalem artichoke ... 60 5e-22 4 (EV162495) 0086357 Brassica napus Bud library Brassica napus... 66 5e-22 4 (CA142033) SCMCRT2086D02.g RT2 Saccharum officinarum cDNA cl... 78 6e-22 3 (BJ400063) Dictyostelium discoideum cDNA clone:dds8n15, 3' e... 68 6e-22 3 (BJ347565) Dictyostelium discoideum cDNA clone:dda27p12, 3' ... 68 6e-22 3 (EB345816) CNSN01-F-058484-501 Normalized CNS library (juven... 68 6e-22 4 (FK925841) EST_lsal_evj_952457 lsalevj mixed_tissue_mixed_st... 56 7e-22 5 (BJ346267) Dictyostelium discoideum cDNA clone:dda30l08, 3' ... 68 7e-22 3 (BJ346383) Dictyostelium discoideum cDNA clone:dda30b21, 3' ... 68 7e-22 3 (BJ430177) Dictyostelium discoideum cDNA clone:ddv6h10, 3' e... 68 7e-22 3 (EV021027) BNSCS2CT_UP_071_H03_18APR2007_017 Brassica napus ... 66 8e-22 4 (AM104059) Lutzomyia longipalpis EST clone NSFM-74a06, seque... 58 9e-22 5 (EB303791) CNSN01-F-062995-501 Normalized CNS library (juven... 68 1e-21 4 (FE233364) CAPG2246.fwd CAPG Naegleria gruberi amoeba stage ... 84 1e-21 3 (EV048702) BNSCS3CT_UP_151_F02_11MAY2007_006 Brassica napus ... 66 1e-21 4 (FF750815) XABT59466.rev Gateway compatible cien cDNA librar... 58 1e-21 5 (AK286037) Glycine max cDNA, clone: GMFL01-20-J20. 80 1e-21 4 (FF606814) G825P512RG8.T0 Acorn worm normalized gastrula pEx... 52 1e-21 4 (EE002624) ROE00014244 Rhizopus oryzae Company Rhizopus oryz... 64 2e-21 5 (DY963641) CLSM1389.b1_I12.ab1 CLS(LMS) lettuce sativa Lactu... 74 2e-21 2 (DL173593) Methods for Identifying the Target of a Compound ... 94 2e-21 3 (AX489153) Sequence 6453 from Patent WO02053728. 94 2e-21 3 (FC730614) CBBG6105.fwd CBBG Lottia gigantea 12,15,18h embry... 72 2e-21 2 (AM637708) Entamoeba dispar GSS, clone dispar47b02.q1k. 56 2e-21 6 (EH062845) PMDBR58TO Perkinsus marinus small insert cDNA lib... 58 2e-21 4 (EX198432) SGT20j3_C06 normalized library from a mix of tamm... 66 3e-21 3 (DN559323) ME7-C12-T3-96-R1 E7PCR Zea mays cDNA clone E7PCRM... 68 3e-21 3 (AZ547267) ENTGM14TR Entamoeba histolytica Sheared DNA Entam... 64 3e-21 4 (AJ561442) Cryptosporidium parvum GSS, PAC clone pica_0002_e... 76 4e-21 4 (FG920526) UCRVU09_CCNT4160_b1 Cowpea UCR 707 Mixed Tissue a... 88 5e-21 4 (EL611934) CtDI_B_32 Safflower (A-1) drought stressed subtra... 72 5e-21 3 (FG920222) UCRVU09_CCNT3973_b1 Cowpea UCR 707 Mixed Tissue a... 88 5e-21 4 (DV621424) IV-1091-402D-E07.T7-1 UGIV-1091-Reseq Zea mays cD... 68 5e-21 4 (DV621679) IV-1091-402D-B10.T7-1 UGIV-1091-Reseq Zea mays cD... 68 5e-21 4 (FG846678) UCRVU05_CCNN14708_b1 Cowpea IT84S-2049 Mixed Tiss... 88 5e-21 4 (EE157571) ZM_BFc0124N23.f ZM_BFc Zea mays cDNA clone ZM_BFc... 70 6e-21 4 (FG817440) UCRVU04_CCNI4145_b1 Cowpea 524B Mixed Tissue and ... 88 6e-21 4 (FG935319) UCRVU09_CCNT13607_g1 Cowpea UCR 707 Mixed Tissue ... 88 7e-21 4 (DY974397) CLSM8070.b1_K01.ab1 CLS(LMS) lettuce sativa Lactu... 72 7e-21 2 (DR097230) STRR1_33_H08.b1_A033 Stem Response Resistant Pinu... 64 8e-21 4 (CA292313) SCACFL8022G12.g FL8 Saccharum officinarum cDNA cl... 86 9e-21 3 (FL337511) 3522944 CERES-264 Zea mays cDNA clone 706465 5', ... 86 9e-21 4 (DQ202367) Schistosoma mansoni 26S proteasome subunit ATPase... 66 9e-21 6 (BG605910) RHIZ2_83_A10.g1_A003 Rhizome2 (RHIZ2) Sorghum pro... 56 9e-21 3 (FL332304) 3498474 CERES-264 Zea mays cDNA clone 688908 5', ... 86 1e-20 4 (AV406309) Bombyx mori cDNA clone:wdV30940. 64 1e-20 3 (AV404650) Bombyx mori cDNA clone:prgv0290. 64 1e-20 3 (EC319560) EMBRYOF088886A14 POSSUM_01-POSSUM-C-EMBRYO-2KB Tr... 88 1e-20 2 (BM328095) PIC1_21_A12.g1_A002 Pathogen-infected compatible ... 56 1e-20 3 (BG605745) RHIZ2_81_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum pro... 56 1e-20 3 (CA236299) SCMCFL5004C05.g Saccharum officinarum FL5 Sacchar... 70 1e-20 4 (DW085121) CLPX8172.b1_H03.ab1 CLP(XYZ) lettuce perennis Lac... 62 1e-20 4 (CT744180) Paramecium tetraurelia 5-PRIME EST from clone LK0... 70 1e-20 4 (BQ833772) 946125E11.y1 946 - tassel primordium prepared by ... 86 1e-20 4 (ES490152) BGBV-aac73a09.g1 Snail_EST_pSMART Biomphalaria gl... 70 1e-20 3 (CN148991) WOUND1_60_C07.b1_A002 Wounded leaves Sorghum bico... 56 1e-20 3 (ES648811) NVPSP03TR NVPP Nasonia vitripennis cDNA, mRNA seq... 64 1e-20 5 (FF757789) XABT64726.rev Gateway compatible cien cDNA librar... 72 2e-20 4 (BJ428704) Dictyostelium discoideum cDNA clone:ddv12n20, 3' ... 84 2e-20 3 (BJ372696) Dictyostelium discoideum cDNA clone:ddc13p15, 3' ... 84 2e-20 3 (BJ436179) Dictyostelium discoideum cDNA clone:ddv30c08, 3' ... 84 2e-20 3 (FL968262) CCHY8570.b1 CCHY Panicum virgatum callus (N) Pani... 58 2e-20 5 (ES834523) UFL_416_51 Cotton fiber 0-10 day post anthesis Go... 78 2e-20 5 (BJ434924) Dictyostelium discoideum cDNA clone:ddv25o09, 3' ... 84 2e-20 3 (EV430107) 210795450 NVP Nasonia vitripennis cDNA clone 220O... 64 2e-20 5 (GE388624) 293721749 Nasonia vitripennis Female Pupae Nasoni... 64 2e-20 5 (BJ343032) Dictyostelium discoideum cDNA clone:dda15n21, 3' ... 84 2e-20 3 (GE399918) 293785656 Nasonia vitripennis Female Pupae Nasoni... 64 2e-20 5 (BJ400840) Dictyostelium discoideum cDNA clone:dds15f02, 3' ... 84 2e-20 3 (GE362834) 292286983 Nasonia vitripennis Male Pupae Nasonia ... 64 2e-20 5 (BJ344479) Dictyostelium discoideum cDNA clone:dda19p09, 3' ... 84 2e-20 3 (BJ341416) Dictyostelium discoideum cDNA clone:dda6f14, 3' e... 84 2e-20 3 (BJ434153) Dictyostelium discoideum cDNA clone:ddv16e02, 3' ... 84 2e-20 3 (BJ400793) Dictyostelium discoideum cDNA clone:dds14h23, 3' ... 84 2e-20 3 (BJ377756) Dictyostelium discoideum cDNA clone:ddc25c21, 3' ... 84 2e-20 3 (BJ345175) Dictyostelium discoideum cDNA clone:dda21i23, 3' ... 84 2e-20 3 (BJ340810) Dictyostelium discoideum cDNA clone:dda3o24, 3' e... 84 2e-20 3 (BJ344809) Dictyostelium discoideum cDNA clone:dda20f18, 3' ... 84 2e-20 3 (BJ339938) Dictyostelium discoideum cDNA clone:dda11d06, 3' ... 84 2e-20 3 (BJ432569) Dictyostelium discoideum cDNA clone:ddv19g05, 3' ... 84 2e-20 3 (BJ341967) Dictyostelium discoideum cDNA clone:dda8o23, 3' e... 84 2e-20 3 (BJ346220) Dictyostelium discoideum cDNA clone:dda30c10, 3' ... 84 2e-20 3 (CT795546) Paramecium tetraurelia 5-PRIME EST from clone LK0... 98 2e-20 2 (BJ430323) Dictyostelium discoideum cDNA clone:ddv6h23, 3' e... 84 2e-20 3 (ES649109) NVPST79TR NVPP Nasonia vitripennis cDNA, mRNA seq... 64 3e-20 5 (DW047463) CLLX14116.b1_H02.ab1 CLL(XYZ) lettuce saligna Lac... 70 3e-20 2 (CU366666) Aphanomyces euteiches cDNA. 60 3e-20 4 (CU360028) Aphanomyces euteiches cDNA. 60 3e-20 4 (FL006906) 3508527 CERES-264 Zea mays cDNA clone 695453 5', ... 68 3e-20 4 (FG472831) 020207KALA004498HT (KALA) Dormant kiwifruit buds ... 72 3e-20 4 (CU360150) Aphanomyces euteiches cDNA. 60 4e-20 4 (FC819627) Sr_pAMT7_015f22_T7 S. ratti mixed stage pAMP Stro... 94 4e-20 2 (CO445879) MZCCL10090E09.g Maize Endosperm cDNA Library Zea ... 86 4e-20 4 (CA093566) SCCCCL3080B05.b CL3 Saccharum officinarum cDNA cl... 72 4e-20 3 (CU367206) Aphanomyces euteiches cDNA. 60 4e-20 4 (FF794098) XABT88808.rev Gateway compatible cien cDNA librar... 58 5e-20 5 (DR060618) RTNIT1_29_A02.b1_A029 Roots minus nitrogen Pinus ... 72 6e-20 3 (FE370250) CBNP1494.rev CBNP_Daphnia_pulex_Chosen_One_Librar... 56 7e-20 4 (CF637697) zmrww00_0B20-008-h09.s2 zmrww00 Zea mays cDNA 3',... 68 7e-20 4 (AB071016) Oryza sativa Japonica Group OsRPT5b mRNA for 26S ... 58 9e-20 4 (CT820046) Paramecium tetraurelia 5-PRIME EST from clone LK0... 98 9e-20 2 (FF380077) CASL574TF CASL Manihot esculenta cDNA 5', mRNA se... 52 1e-19 4 (AC203153) Zea mays chromosome 5 clone ZMMBBb-31P14; ZMMBBb0... 50 1e-19 7 (DY369564) ZO__Ef0001K10.f ZO__Ef Zingiber officinale cDNA c... 58 1e-19 5 (EE076827) S1G06781 Fruits and flowers treated with GA3 (VvS... 84 1e-19 2 (BG051463) FM1_56_G09.g1_A003 Floral-Induced Meristem 1 (FM1... 56 1e-19 3 (CD223109) CCC1_26_B02.b1_A007 Callus culture/cell suspensio... 56 1e-19 3 (CD222448) CCC1_22_H08.b1_A007 Callus culture/cell suspensio... 56 1e-19 3 (BF587769) FM1_40_C10.g1_A003 Floral-Induced Meristem 1 (FM1... 56 1e-19 3 (EX849646) CBNC8041.rev CBNC Phycomyces blakesleeanus NRRL15... 70 1e-19 2 (DV474474) 5481_C03_F05ZE5_027 Brachypodium distachyon devel... 68 1e-19 3 (EV163738) 0165149 Brassica napus Late bud Brassica napus cD... 82 2e-19 3 (DY369565) ZO__Ef0001K10.r ZO__Ef Zingiber officinale cDNA c... 58 2e-19 5 (FC615942) CAXS7979.fwd CAXS Lottia gigantea from head, foot... 48 2e-19 4 (FC615941) CAXS7979.rev CAXS Lottia gigantea from head, foot... 48 2e-19 4 (CF828399) UCRCR01_01I11_r Clementine Mandarin Albedo at Rin... 46 2e-19 4 (FG920223) UCRVU09_CCNT3973_g1 Cowpea UCR 707 Mixed Tissue a... 88 2e-19 3 (CX642328) UCRPT02_59E08_g Poncirus trifoliata Roots with Ir... 80 2e-19 3 (EH066688) PMDA830TO Perkinsus marinus small insert cDNA lib... 54 2e-19 5 (CK444349) GQ0071.TB_K05 GQ007: Secondary xylem of girdled s... 70 2e-19 3 (ES858617) WS02775.CR_K15 SS-IL-A-FL-14 Picea sitchensis cDN... 70 2e-19 3 (DR576583) WS00743.C21_N20 WS-PS-N-A-8 Picea glauca cDNA clo... 70 2e-19 3 (EX391405) GQ03319.B7_O04 GQ033 - Terminal leader (Normalize... 70 2e-19 3 (CA265686) SCEZRT3070C04.g RT3 Saccharum officinarum cDNA cl... 70 2e-19 4 (BJ345400) Dictyostelium discoideum cDNA clone:dda23g15, 3' ... 84 3e-19 3 (EX626327) 255437947 Pea aphid whole body normalized full le... 44 3e-19 5 (EX647604) 256713991 Pea aphid whole body normalized full le... 46 3e-19 5 (CR382139) Debaryomyces hansenii strain CBS767 chromosome G ... 64 3e-19 3 (FF659412) G826P5292RF2.T0 Acorn worm normalized juvenile pE... 52 3e-19 4 (FL710847) CCGA13807.g1 CCGA Panicum virgatum apex + stem (H... 54 3e-19 5 (FL694304) CCGA3727.g1 CCGA Panicum virgatum apex + stem (H)... 62 3e-19 5 (FL717854) CCGB4063.b1 CCGB Panicum virgatum apex + stem (L)... 60 3e-19 5 (GE461616) 294749230 Nasonia vitripennis Adult Female Nasoni... 50 4e-19 4 (BQ621065) 1091064A04.x1 1091 - Immature ear with common EST... 86 4e-19 3 (CO454698) MZCCL10208F02.g Maize Endosperm cDNA Library Zea ... 86 4e-19 3 (DN210574) MEST922_A01.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRN... 86 4e-19 3 (DY968444) CLSM19513.b1_B08.ab1 CLS(LMS) lettuce sativa Lact... 72 4e-19 2 (DT669262) s13dLT04F09FM075_329078 Darnel ryegrass, Lolium t... 80 4e-19 3 (DT669086) s13dLT01G03FM020_328726 Darnel ryegrass, Lolium t... 80 4e-19 3 (CX663416) UCRCP01_003_G05_T3 Swingle citrumelo nematode-cha... 48 4e-19 4 (DN220210) MEST1096_H07.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mR... 86 4e-19 3 (DN219224) MEST1078_D06.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mR... 86 4e-19 3 (DN215841) MEST993_C04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRN... 86 4e-19 3 (DY395453) PES669 Petunia embryosac SMART cDNA library Petun... 88 4e-19 2 (DR443409) AR2016A02 A. gomesiana hemocytes library Acanthos... 88 4e-19 2 (DT669957) s13dLT13F09FM075_331740 Darnel ryegrass, Lolium t... 80 5e-19 3 (DN229856) MEST1015_H05.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mR... 86 5e-19 3 (DT669065) s13dLT01E05FM035_328684 Darnel ryegrass, Lolium t... 80 5e-19 3 (FF397376) MOOED92TF MOO Vigna unguiculata cDNA 5', mRNA seq... 88 5e-19 3 (DW093793) CLPY5002.b1_C03.ab1 CLP(XYZ) lettuce perennis Lac... 62 5e-19 4 (AC116987) Dictyostelium discoideum chromosome 2 map 3527441... 68 6e-19 5 (FK117097) XABT160073.g1 Gateway compatible cien cDNA librar... 58 6e-19 5 (FF336389) 280462866 Pea aphid whole body normalized full le... 44 6e-19 6 (CJ405981) Molgula tectiformis cDNA, gonad clone:mtgd024n19,... 62 7e-19 5 (CA994306) P01-6 Pst1-P fragment Gossypium hirsutum cDNA 5',... 54 7e-19 5 (GE385187) 293699735 Nasonia vitripennis Female Pupae Nasoni... 64 8e-19 5 (DR494556) WS0295.BR_I06 SS-IB-A-FL-15 Picea sitchensis cDNA... 64 8e-19 3 (EX276385) 1457260_5_C10_045 PY06 Carica papaya cDNA, mRNA s... 86 9e-19 4 (CJ397786) Molgula tectiformis cDNA, gonad clone:mtgd001e07,... 62 9e-19 5 (CT781211) Paramecium tetraurelia 5-PRIME EST from clone LK0... 70 1e-18 3 (DN231873) MEST1054_A09.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mR... 70 1e-18 4 (DR465215) WS00934.B21_O17 IS-B-N-A-10 Picea engelmannii x P... 64 1e-18 3 (GE447449) 294580704 Nasonia vitripennis Adult Female Nasoni... 64 1e-18 5 (FF313548) 279390403 Pea aphid whole body normalized full le... 54 1e-18 4 (CJ405718) Molgula tectiformis cDNA, gonad clone:mtgd024b16,... 62 1e-18 5 (AU262962) Dictyostelium discoideum vegetative cDNA clone:VS... 84 1e-18 3 (CX583833) TTE00034880 Amplicon Express - Conjugative Form T... 62 1e-18 4 (CA219592) SCRUFL4020H02.g FL4 Saccharum officinarum cDNA cl... 78 1e-18 3 (CA153645) SCUTRZ2024D12.b RZ2 Saccharum officinarum cDNA cl... 72 1e-18 3 (EV162415) 0086277 Brassica napus Bud library Brassica napus... 54 1e-18 4 (CD236579) SS1_35_F04.b1_A012 Salt-stressed seedlings Sorghu... 56 2e-18 3 (AW400134) 707052C05.y1 707 - Mixed adult tissues from Walbo... 84 2e-18 3 (AU037308) Dictyostelium discoideum slug cDNA, clone SSB746. 84 2e-18 3 (EL466428) CHTS5256.b2_O18.ab1 CHT(LMS) Jerusalem artichoke ... 66 2e-18 2 (EL462835) CHTS17313.b1_A09.ab1 CHT(LMS) Jerusalem artichoke... 66 2e-18 2 (GE514003) CCFT9229.g1_I03.ab1 CCF(STU) sunflower Helianthus... 66 2e-18 2 (EE619690) CHWM6927.b1_M03.ab1 CHW(LMS) silverleaf sunflower... 66 2e-18 2 (GE510893) CCFT774.g1_K01.ab1 CCF(STU) sunflower Helianthus ... 66 2e-18 2 (CD228333) CCC1_7_H12.b1_A007 Callus culture/cell suspension... 56 2e-18 3 (C91302) Dictyostelium discoideum slug cDNA, clone SSK224. 84 2e-18 3 (CD230896) SS1_20_D05.b1_A012 Salt-stressed seedlings Sorghu... 56 2e-18 3 (CD230003) SS1_40_B07.b1_A012 Salt-stressed seedlings Sorghu... 56 2e-18 3 (BU037874) 946142G11.x1 946 - tassel primordium prepared by ... 60 2e-18 5 (C91943) Dictyostelium discoideum slug cDNA, clone SSC519. 84 2e-18 3 (CD491231) WHE3081_E10_J19ZT CS wheat cold-stressed seedling... 56 2e-18 3 (AM667113) Entamoeba terrapinae GSS, clone terra121e08.q1k. 64 2e-18 3 (C90774) Dictyostelium discoideum slug cDNA, clone SSJ132. 86 2e-18 3 (CA236131) SCRFFL5040A09.g Saccharum officinarum FL5 Sacchar... 70 2e-18 3 (DT339583) JBW099H10.b_066.abi Pineapple root tip cDNA libra... 58 2e-18 5 (AY112136) Zea mays CL34715_1 mRNA sequence. 84 2e-18 3 (GE585678) CCPW10012.b1_G07.ab1 CCP(UWX) Globe Artichoke Cyn... 72 2e-18 3 (GE608685) CCPX5674.b1_D04.ab1 CCP(UWX) Globe Artichoke Cyna... 72 3e-18 3 (ES850593) UFL_651_54 Cotton fiber 0-10 day post anthesis Go... 54 3e-18 4 (EH413115) 12A11 Fire ant Uni-ZAP XR Library Solenopsis invi... 60 3e-18 4 (EI024116) bb52d10.r Dekkera bruxellensis Random Genomic Lib... 105 3e-18 1 (EI013600) bb10b06.f Dekkera bruxellensis Random Genomic Lib... 105 3e-18 1 (EL475989) CHUL3945.b1_B03.ab1 CHU(LMS) puzzle sunflower Hel... 60 4e-18 3 (FF777217) XABT77728.rev Gateway compatible cien cDNA librar... 58 4e-18 4 (GE409004) 293805431 Nasonia vitripennis Female Pupae Nasoni... 56 4e-18 5 (CD462768) ETH1_40_A08.b1_A002 Ethylene-treated seedlings So... 70 4e-18 4 (CA086916) SCQGAM2029G10.g AM2 Saccharum officinarum cDNA cl... 78 4e-18 3 (CX613250) GABR1_7_D04.b1_A002 GA- or brassinolide-treated s... 70 5e-18 4 (AB044593) Brassica rapa BrTBP gene for Tat binding protein ... 54 5e-18 4 (AW568456) si59a07.y1 Gm-r1030 Glycine max cDNA clone GENOME... 80 5e-18 3 (AI941637) 618032E06.x1 618 - Inbred Tassel cDNA Library Zea... 86 5e-18 2 (CN135484) OX1_37_D01.b1_A002 Oxidatively-stressed leaves an... 70 5e-18 4 (EX034124) BR018768 callus cDNA library KBCG Brassica rapa s... 66 7e-18 2 (EX063431) BR048075 etiolated mature leaf cDNA library KBLW ... 66 7e-18 2 (BH158528) ENTQT70TF Entamoeba histolytica Sheared DNA Entam... 48 7e-18 4 (ES217612) MpFVN_ag1_F08 Myzus persicae, line F001, PLRV fre... 68 7e-18 2 (AZ539188) ENTGC32TR Entamoeba histolytica Sheared DNA Entam... 48 7e-18 4 (GE750144) MUS17-D04.y1d-s SHGC-MUS Mytilus californianus cD... 52 7e-18 5 (DN224076) MEST1153_D04.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mR... 86 8e-18 2 (EV075528) BNSCS4CT_UP_223_A01_24MAY2007_015 Brassica napus ... 66 8e-18 3 (CN827330) EL2156F Brassica embryo library (EL) Brassica nap... 66 9e-18 3 (EX480328) EST_lsal_evj_790753 lsalevj mixed_tissue_mixed_st... 56 1e-17 4 (EX348021) GQ03105.B7_O13 GQ031 - Xylem Scrapings (Normalize... 64 1e-17 3 (EX390741) GQ03318.B7_B12 GQ033 - Terminal leader (Normalize... 64 1e-17 3 (EX382951) GQ03305.B7_O13 GQ033 - Terminal leader (Normalize... 64 1e-17 3 (CO099735) GR__Ea24M13.f GR__Ea Gossypium raimondii cDNA clo... 78 1e-17 4 (EX230579) PY01054X1A04.f1 PY01 Carica papaya cDNA, mRNA seq... 86 1e-17 3 (ES862123) WS02786.CR_H05 SS-IL-A-FL-14 Picea sitchensis cDN... 64 1e-17 3 (AY810445) Schistosoma japonicum SJCHGC03868 protein mRNA, p... 52 2e-17 4 (CV672187) RE-3-SJ-P_E12_RE-3-SJ-PE12-T7 Schistosoma japonic... 52 2e-17 4 (BG948750) LG1_330_B12.b1_A002 Light Grown 1 (LG1) Sorghum b... 54 2e-17 3 (EX485432) EST_lsal_evj_796049 lsalevj mixed_tissue_mixed_st... 56 2e-17 4 (EX228833) PY01043X1F04.f1 PY01 Carica papaya cDNA, mRNA seq... 86 2e-17 3 (CN190995) UCRCS06_0004G10_r Washington Navel Orange Stored ... 64 2e-17 4 (FL988837) CCHY19886.g1 CCHY Panicum virgatum callus (N) Pan... 42 2e-17 6 (CO845401) LM_GM5_002991 Locusta migratoria gregarious phase... 68 2e-17 3 (CX102094) RECm3072 A normalized whole-life-cycle cDNA libra... 60 2e-17 4 (CO845402) LM_GM5_002992 Locusta migratoria gregarious phase... 60 2e-17 3 (AZ668023) ENTJN80TF Entamoeba histolytica Sheared DNA Entam... 64 2e-17 4 (EY181454) CBTI8175.g1_N03.ab1:P Triphysaria pusilla root ti... 94 3e-17 2 (AC211323) Zea mays chromosome 5 clone CH201-65L11; ZMMBBc00... 50 3e-17 6 (DV473204) 5452_D12_G24ZE5_090 Brachypodium distachyon devel... 60 3e-17 3 (AB012136) Schizosaccharomyces pombe gene for regulatory sub... 96 3e-17 2
>(BJ347596) Dictyostelium discoideum cDNA clone:dda27g13, 3' end, single read. Length = 771
Score = 1126 bits (568), Expect(5) = 0.0 Identities = 568/568 (100%) Strand = Plus / Minus
Query: 319 ggcacgtgcatgtgcagcacaaacaaattctacctacctcaaattggcaggtccacaatt 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 ggcacgtgcatgtgcagcacaaacaaattctacctacctcaaattggcaggtccacaatt 541
Query: 379 ggtacaaatgtttattggtgatggtgcaaaactagttagagatgcatttgcattggccaa 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 ggtacaaatgtttattggtgatggtgcaaaactagttagagatgcatttgcattggccaa 481
Query: 439 agagaaaggaccaaccattatctttattgatgaactcgatgctattggtaccaaacgttt 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 agagaaaggaccaaccattatctttattgatgaactcgatgctattggtaccaaacgttt 421
Query: 499 cgatagtgaggttagtggtgatagagaggtgcaacgtacaatgttagagttactcaatca 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 cgatagtgaggttagtggtgatagagaggtgcaacgtacaatgttagagttactcaatca 361
Query: 559 attggatggtttcagtagtgatgcaaatatcaaagttatcgccgccaccaatcgtattga 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 attggatggtttcagtagtgatgcaaatatcaaagttatcgccgccaccaatcgtattga 301
Query: 619 tatcttggatcctgctctcttgagatctggtcgtttggatagaaagattgaattcccatt 678 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tatcttggatcctgctctcttgagatctggtcgtttggatagaaagattgaattcccatt 241
Query: 679 accaaatgaagaggctagagctcatatccttcaaattcactctcgtaagatgaacgtttc 738 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 accaaatgaagaggctagagctcatatccttcaaattcactctcgtaagatgaacgtttc 181
Query: 739 cgctgatgttaatttcgatgagttggcacgttcctctgaagatttcaatggcgctcaatt 798 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 cgctgatgttaatttcgatgagttggcacgttcctctgaagatttcaatggcgctcaatt 121
Query: 799 aaaagcagtttgtgtcgaagctggtatgattgcacttcgtagaggtggtacagaattaat 858 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 aaaagcagtttgtgtcgaagctggtatgattgcacttcgtagaggtggtacagaattaat 61
Query: 859 tcataatgattttgttgaaggttgtgtt 886 |||||||||||||||||||||||||||| Sbjct: 60 tcataatgattttgttgaaggttgtgtt 33
Score = 260 bits (131), Expect(5) = 0.0 Identities = 131/131 (100%) Strand = Plus / Minus
Query: 174 ggtggattagataaacaaattcaagaattagttgaagcagtagtgttaccaatgacacac 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 ggtggattagataaacaaattcaagaattagttgaagcagtagtgttaccaatgacacac 684
Query: 234 aaagagagatttgaatcaattggtattaaaccaccaaagggagtattgatgtatggtcca 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 683 aaagagagatttgaatcaattggtattaaaccaccaaagggagtattgatgtatggtcca 624
Query: 294 ccaggtactgg 304 ||||||||||| Sbjct: 623 ccaggtactgg 613
Score = 52.0 bits (26), Expect(5) = 0.0 Identities = 26/26 (100%) Strand = Plus / Minus
Query: 895 ggcaaagaaaaagaaaactttagaat 920 |||||||||||||||||||||||||| Sbjct: 26 ggcaaagaaaaagaaaactttagaat 1
Score = 46.1 bits (23), Expect(5) = 0.0 Identities = 28/30 (93%) Strand = Plus / Minus
Query: 145 aaaaacaacagaggaatatagtgatattgg 174 |||| || |||||||||||||||||||||| Sbjct: 771 aaaaccancagaggaatatagtgatattgg 742
Score = 32.2 bits (16), Expect(5) = 0.0 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 304 ggtaagacattattgg 319 |||||||||||||||| Sbjct: 614 ggtaagacattattgg 599
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 98226423 Number of Hits to DB: 895,833,634 Number of extensions: 53075287 Number of successful extensions: 4707425 Number of sequences better than 10.0: 3976 Length of query: 1071 Length of database: 98,766,808,389 Length adjustment: 24 Effective length of query: 1047 Effective length of database: 96,409,374,237 Effective search space: 100940614826139 Effective search space used: 100940614826139 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 7.20 |
Homology vs Protein |
Query= Contig-U16043-1 (Contig-U16043-1Q) /CSM_Contig/Contig-U16043-1Q.Seq.d (1071 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
AK167002_1(AK167002|pid:none) Mus musculus blastocyst blastocyst... 321 e-105 BC107804_1(BC107804|pid:none) Homo sapiens proteasome (prosome, ... 321 e-105 AL691439_2(AL691439|pid:none) Mouse DNA sequence from clone RP23... 321 e-105 (P17980) RecName: Full=26S protease regulatory subunit 6A; AltNa... 321 e-105 (Q63569) RecName: Full=26S protease regulatory subunit 6A; AltNa... 321 e-105 BT034485_1(BT034485|pid:none) Zea mays full-length cDNA clone ZM... 322 e-105 BC103063_1(BC103063|pid:none) Bos taurus proteasome (prosome, ma... 321 e-105 BT025458_1(BT025458|pid:none) Bos taurus proteasome (prosome, ma... 321 e-105 AK151370_1(AK151370|pid:none) Mus musculus bone marrow macrophag... 321 e-105 AJ720697_1(AJ720697|pid:none) Gallus gallus mRNA for hypothetica... 321 e-105 BC075596_1(BC075596|pid:none) Xenopus tropicalis proteasome (pro... 321 e-105 BT043367_1(BT043367|pid:none) Zea mays full-length cDNA clone ZM... 322 e-105 AK168263_1(AK168263|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 321 e-105 AL691439_3(AL691439|pid:none) Mouse DNA sequence from clone RP23... 321 e-105 BT040193_1(BT040193|pid:none) Zea mays full-length cDNA clone ZM... 322 e-105 AP002854_15(AP002854|pid:none) Oryza sativa Japonica Group genom... 322 e-105 D17788_1(D17788|pid:none) Oryza sativa Japonica Group mRNA for h... 322 e-105 AC009606_1(AC009606|pid:none) Arabidopsis thaliana chromosome II... 320 e-105 AB171711_1(AB171711|pid:none) Macaca fascicularis brain cDNA clo... 321 e-105 BC054164_1(BC054164|pid:none) Xenopus laevis proteasome (prosome... 320 e-105 AP005056_24(AP005056|pid:none) Oryza sativa Japonica Group genom... 322 e-105 U77918_1(U77918|pid:none) Rattus norvegicus spermatogenic cell/s... 320 e-105 AF412095_1(AF412095|pid:none) Arabidopsis thaliana At1g09100/F7G... 320 e-105 (O04019) RecName: Full=26S protease regulatory subunit 6A homolo... 320 e-105 BT046299_1(BT046299|pid:none) Salmo salar clone ssal-eve-543-152... 320 e-105 AK222485_1(AK222485|pid:none) Homo sapiens mRNA for proteasome 2... 320 e-105 AK167061_1(AK167061|pid:none) Mus musculus blastocyst blastocyst... 319 e-105 FB781802_1(FB781802|pid:none) Sequence 1075 from Patent WO200803... 320 e-105 AC136288_5(AC136288|pid:none) Medicago truncatula clone mth2-13o... 319 e-105 (P54776) RecName: Full=26S protease regulatory subunit 6A homolo... 321 e-105 BT052739_1(BT052739|pid:none) Medicago truncatula clone MTYFH_FI... 317 e-104 AM910991_280(AM910991|pid:none) Plasmodium knowlesi strain H chr... 318 e-104 AE014186_295(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 318 e-104 BT077485_1(BT077485|pid:none) Lepeophtheirus salmonis Pacific fo... 317 e-104 (O42586) RecName: Full=26S protease regulatory subunit 6A-B; Alt... 315 e-104 BT080690_1(BT080690|pid:none) Caligus clemensi clone ccle-evs-50... 315 e-103 EF085905_1(EF085905|pid:none) Picea sitchensis clone WS0295_I06 ... 315 e-103 FB781816_1(FB781816|pid:none) Sequence 1089 from Patent WO200803... 314 e-103 CP001575_145(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 315 e-102 AY750868_1(AY750868|pid:none) Toxoptera citricida putative 26S p... 307 e-101 FN314258_1(FN314258|pid:none) Schistosoma japonicum isolate Anhu... 307 e-101 FN357393_54(FN357393|pid:none) Schistosoma mansoni genome sequen... 306 e-101 CP000586_397(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 317 e-101 AF134402_1(AF134402|pid:none) Drosophila melanogaster Tat-bindin... 308 e-101 AF067618_3(AF067618|pid:none) Caenorhabditis elegans cosmid F56H... 308 e-101 AP007154_387(AP007154|pid:none) Aspergillus oryzae RIB40 genomic... 304 6e-97 CR382130_373(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 299 6e-97 (P33297) RecName: Full=26S protease regulatory subunit 6A; AltNa... 305 8e-97 AE017353_152(AE017353|pid:none) Cryptococcus neoformans var. neo... 302 2e-96 CU928178_417(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 302 1e-95 CR380947_109(CR380947|pid:none) Candida glabrata strain CBS138 c... 301 1e-95 AL691439_1(AL691439|pid:none) Mouse DNA sequence from clone RP23... 286 2e-95 BX908808_47(BX908808|pid:none) Neurospora crassa DNA linkage gro... 299 3e-95 CR382125_922(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 297 6e-95 AB429248_1(AB429248|pid:none) Dicyema japonicum psmc3 gene for 2... 293 7e-95 CU638744_559(CU638744|pid:none) Podospora anserina genomic DNA c... 298 9e-95 AL590449_141(AL590449|pid:none) chromosome X of strain GB-M1 of ... 294 2e-94 FN357393_55(FN357393|pid:none) Schistosoma mansoni genome sequen... 280 2e-93 AM494959_57(AM494959|pid:none) Leishmania braziliensis chromosom... 280 6e-92 AM502240_60(AM502240|pid:none) Leishmania infantum chromosome 22. 280 6e-92 CT005261_60(CT005261|pid:none) Leishmania major strain Friedlin,... 280 6e-92 AF227503_1(AF227503|pid:none) Trypanosoma brucei proteasome regu... 261 8e-85 AB071016_1(AB071016|pid:none) Oryza sativa Japonica Group OsRPT5... 304 4e-81 FN357393_56(FN357393|pid:none) Schistosoma mansoni genome sequen... 238 9e-81 AK071386_1(AK071386|pid:none) Oryza sativa Japonica Group cDNA c... 246 9e-81 CR855073_5(CR855073|pid:none) Oryza sativa (indica cultivar-grou... 244 3e-80 AJ010592_133(AJ010592|pid:none) Guillardia theta DNA for complet... 241 1e-75 AB005895_1(AB005895|pid:none) Rattus rattus TBP-1 mRNA for Tat-b... 283 6e-75 (Q90732) RecName: Full=26S protease regulatory subunit 4; AltNam... 224 8e-73 (P62191) RecName: Full=26S protease regulatory subunit 4; AltNam... 221 9e-72 AK222668_1(AK222668|pid:none) Homo sapiens mRNA for proteasome 2... 221 9e-72 BT020983_1(BT020983|pid:none) Bos taurus proteasome (prosome, ma... 221 9e-72 A44468(A44468;B44468)26S proteasome regulatory chain 4 [validate... 221 9e-72 BC067741_1(BC067741|pid:none) Homo sapiens proteasome (prosome, ... 221 9e-72 AL935145_2(AL935145|pid:none) Zebrafish DNA sequence from clone ... 222 3e-71 (P48601) RecName: Full=26S protease regulatory subunit 4; AltNam... 219 3e-71 DQ440313_1(DQ440313|pid:none) Aedes aegypti clone AET-397 26S pr... 219 3e-71 FB781850_1(FB781850|pid:none) Sequence 1123 from Patent WO200803... 221 3e-71 BT062241_1(BT062241|pid:none) Zea mays full-length cDNA clone ZM... 221 3e-71 D17789_1(D17789|pid:none) Oryza sativa Japonica Group mRNA for h... 221 4e-71 (P46466) RecName: Full=26S protease regulatory subunit 4 homolog... 221 4e-71 BT054998_1(BT054998|pid:none) Zea mays full-length cDNA clone ZM... 221 4e-71 AF123391_1(AF123391|pid:none) Arabidopsis thaliana 26S proteasom... 221 4e-71 AB161192_1(AB161192|pid:none) Arabidopsis thaliana HLR mRNA for ... 221 4e-71 BC154336_1(BC154336|pid:none) Danio rerio proteasome (prosome, m... 221 4e-71 BC049471_1(BC049471|pid:none) Danio rerio proteasome (prosome, m... 221 4e-71 AB169562_1(AB169562|pid:none) Macaca fascicularis brain cDNA, cl... 219 6e-71 AB037154_1(AB037154|pid:none) Oryza sativa Japonica Group OsRPT2... 220 9e-71 AF432345_1(AF432345|pid:none) Tortula ruralis 26S proteasome reg... 223 9e-71 BC054287_1(BC054287|pid:none) Xenopus laevis protease (prosome, ... 220 9e-71 AC006081_7(AC006081|pid:none) Arabidopsis thaliana chromosome 2 ... 220 1e-70 EU959285_1(EU959285|pid:none) Zea mays clone 214269 26S protease... 219 2e-70 AY540192_1(AY540192|pid:none) Oreochromis mossambicus proteasome... 216 2e-70 BT043952_1(BT043952|pid:none) Salmo salar clone HM4_3128 proteas... 218 4e-70 AC150776_3(AC150776|pid:none) Medicago truncatula chromosome 7 c... 216 6e-70 FN320332_1(FN320332|pid:none) Schistosoma japonicum isolate Anhu... 219 6e-70 DQ206972_1(DQ206972|pid:none) Schistosoma mansoni 26S proteasome... 219 6e-70 AY087584_1(AY087584|pid:none) Arabidopsis thaliana clone 36815 m... 217 8e-70 BT076124_1(BT076124|pid:none) Caligus rogercresseyi clone crog-e... 217 1e-69 FN318152_1(FN318152|pid:none) Schistosoma japonicum isolate Anhu... 218 1e-69 AK010505_1(AK010505|pid:none) Mus musculus ES cells cDNA, RIKEN ... 218 1e-69 FN375083_1(FN375083|pid:none) Schistosoma mansoni genome sequenc... 218 2e-69 AM502254_679(AM502254|pid:none) Leishmania infantum chromosome 36. 222 2e-69 AM494972_460(AM494972|pid:none) Leishmania braziliensis chromoso... 222 2e-69 (O18413) RecName: Full=26S protease regulatory subunit 8; &AE01... 218 2e-69 U97538_1(U97538|pid:none) Drosophila melanogaster DUG mRNA, comp... 218 2e-69 BT073386_1(BT073386|pid:none) Oncorhynchus mykiss clone omyk-evn... 215 3e-69 CP001365_184(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 221 5e-69 AB171905_1(AB171905|pid:none) Macaca fascicularis brain cDNA clo... 216 5e-69 CP001325_99(CP001325|pid:none) Micromonas sp. RCC299 chromosome ... 214 7e-69 (O16368) RecName: Full=Probable 26S protease regulatory subunit ... 214 9e-69 AY627303_1(AY627303|pid:none) Haloferax volcanii DS2 proteasome-... 224 9e-69 BC078375_1(BC078375|pid:none) Danio rerio proteasome (prosome, m... 215 9e-69 (P62194) RecName: Full=26S protease regulatory subunit 8; AltNam... 215 9e-69 BT019726_1(BT019726|pid:none) Synthetic construct Homo sapiens p... 215 9e-69 D44467_1(D44467|pid:none) Homo sapiens mRNA for 26S proteasome s... 215 9e-69 AB000493_1(AB000493|pid:none) Rattus norvegicus gene for proteas... 215 9e-69 AF517885_1(AF517885|pid:none) Griffithsia japonica isolate Gj112... 214 9e-69 AF035309_1(AF035309|pid:none) Homo sapiens clone 23598 mRNA, com... 215 9e-69 BT075406_1(BT075406|pid:none) Osmerus mordax clone omor-eva-504-... 214 2e-68 T27048(T27048) hypothetical protein Y49E10.1 - Caenorhabditis el... 216 3e-68 AE014185_79(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 207 7e-68 AL590451_186(AL590451|pid:none) chromosome IX of strain GB-M1 of... 212 9e-68 (Q58576) RecName: Full=Proteasome-activating nucleotidase; AltNa... 210 1e-67 BT058391_1(BT058391|pid:none) Salmo salar clone Contig273 26S pr... 212 2e-67 (O28303) RecName: Full=Proteasome-activating nucleotidase; AltNa... 214 2e-67 AF099922_2(AF099922|pid:none) Caenorhabditis elegans cosmid F56F... 214 2e-67 AF099922_3(AF099922|pid:none) Caenorhabditis elegans cosmid F56F... 214 2e-67 DQ864866_1(DQ864866|pid:none) Pfiesteria piscicida clone ppi-5p-... 209 2e-67 AE014297_4820(AE014297|pid:none) Drosophila melanogaster chromos... 209 3e-67 AK150189_1(AK150189|pid:none) Mus musculus bone marrow macrophag... 192 3e-67 AB171188_1(AB171188|pid:none) Macaca fascicularis brain cDNA clo... 212 4e-67 L38810_1(L38810|pid:none) Homo sapiens thyroid receptor interact... 209 5e-67 CR859252_1(CR859252|pid:none) Pongo abelii mRNA; cDNA DKFZp469N2... 209 6e-67 AP007172_18(AP007172|pid:none) Aspergillus oryzae RIB40 genomic ... 212 6e-67 AM494950_89(AM494950|pid:none) Leishmania braziliensis chromosom... 211 8e-67 BX538350_38(BX538350|pid:none) Cryptosporidium parvum chromosome... 209 8e-67 AB035272_1(AB035272|pid:none) Matricaria chamomilla McTBP1 mRNA ... 207 2e-66 EF678275_1(EF678275|pid:none) Picea sitchensis clone WS02911_P12... 207 2e-66 AK226206_1(AK226206|pid:none) Arabidopsis thaliana mRNA for 26S ... 207 2e-66 EU162611_6(EU162611|pid:none) Capsella rubella clone contig46 BA... 207 2e-66 AF123395_1(AF123395|pid:none) Arabidopsis thaliana 26S proteasom... 207 2e-66 CU928173_172(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 207 3e-66 AE016818_336(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 206 3e-66 CU633898_26(CU633898|pid:none) Podospora anserina genomic DNA ch... 210 3e-66 AX497296_1(AX497296|pid:none) Sequence 63 from Patent WO0229058. 208 4e-66 AB033537_1(AB033537|pid:none) Oryza sativa Japonica Group OsRPT6... 206 4e-66 BT054955_1(BT054955|pid:none) Zea mays full-length cDNA clone ZM... 206 4e-66 FB781822_1(FB781822|pid:none) Sequence 1095 from Patent WO200803... 206 4e-66 (Q25544) RecName: Full=26S protease regulatory subunit 8 homolog... 206 5e-66 CP000496_248(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 205 7e-66 AM180088_563(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 212 7e-66 (P34124) RecName: Full=26S protease regulatory subunit 8; AltNam... 204 9e-66 FN392322_761(FN392322|pid:none) Pichia pastoris GS115 chromosome... 204 1e-65 (Q8TX03) RecName: Full=Proteasome-activating nucleotidase; AltNa... 208 1e-65 AF227500_1(AF227500|pid:none) Trypanosoma brucei proteasome regu... 207 1e-65 FM992689_795(FM992689|pid:none) Candida dubliniensis CD36 chromo... 203 2e-65 AK065619_1(AK065619|pid:none) Oryza sativa Japonica Group cDNA c... 204 2e-65 CU928171_706(CU928171|pid:none) Kluyveromyces thermotolerans str... 203 2e-65 CR380955_202(CR380955|pid:none) Candida glabrata strain CBS138 c... 204 2e-65 (Q01939) RecName: Full=26S protease regulatory subunit 8 homolog... 206 3e-65 X66400_1(X66400|pid:none) S.cerevisiae SUG1 gene. 206 3e-65 AY011124_1(AY011124|pid:none) Dactylis glomerata 26S proteasome ... 202 9e-65 AY810445_1(AY810445|pid:none) Schistosoma japonicum SJCHGC03868 ... 249 1e-64 L17040_1(L17040|pid:none) Saccharomyces cerevisiae ATPase gene, ... 202 1e-64 CR382126_636(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 201 1e-64 CR382130_688(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 202 1e-64 (P36612) RecName: Full=26S protease regulatory subunit 4 homolog... 200 2e-64 CU928179_930(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 202 2e-64 CR382135_216(CR382135|pid:none) Debaryomyces hansenii strain CBS... 200 2e-64 CR382135_420(CR382135|pid:none) Debaryomyces hansenii strain CBS... 201 2e-64 (Q5JHS5) RecName: Full=Proteasome-activating nucleotidase; AltNa... 197 4e-64 AY627304_1(AY627304|pid:none) Haloferax volcanii DS2 proteasome-... 208 5e-64 AE017350_96(AE017350|pid:none) Cryptococcus neoformans var. neof... 198 5e-64 AE017350_312(AE017350|pid:none) Cryptococcus neoformans var. neo... 204 5e-64 AE017347_370(AE017347|pid:none) Cryptococcus neoformans var. neo... 206 6e-64 (Q0W257) RecName: Full=Proteasome-activating nucleotidase; AltNa... 204 6e-64 AE008384_1006(AE008384|pid:none) Methanosarcina mazei strain Goe... 198 8e-64 (Q8PY58) RecName: Full=Proteasome-activating nucleotidase; AltNa... 198 8e-64 (Q9YAC7) RecName: Full=Proteasome-activating nucleotidase; AltNa... 205 8e-64 CR382132_107(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 198 1e-63 (A6UQT3) RecName: Full=Proteasome-activating nucleotidase; AltNa... 204 1e-63 CP001140_1265(CP001140|pid:none) Desulfurococcus kamchatkensis 1... 204 2e-63 AM114193_1720(AM114193|pid:none) Uncultured methanogenic archaeo... 196 2e-63 CP000099_606(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 198 4e-63 AE010299_4158(AE010299|pid:none) Methanosarcina acetivorans str.... 197 5e-63 (Q8TI88) RecName: Full=Proteasome-activating nucleotidase; AltNa... 197 5e-63 (A6VHR1) RecName: Full=Proteasome-activating nucleotidase; AltNa... 201 5e-63 AM270384_3(AM270384|pid:none) Aspergillus niger contig An17c0020... 199 7e-63 CP000678_354(CP000678|pid:none) Methanobrevibacter smithii ATCC ... 201 7e-63 (A4G0S4) RecName: Full=Proteasome-activating nucleotidase; AltNa... 201 7e-63 AY596297_3126(AY596297|pid:none) Haloarcula marismortui ATCC 430... 206 7e-63 (O57940) RecName: Full=Proteasome-activating nucleotidase; AltNa... 196 7e-63 AE014298_1620(AE014298|pid:none) Drosophila melanogaster chromos... 197 9e-63 (Q6LWR0) RecName: Full=Proteasome-activating nucleotidase; AltNa... 200 9e-63 CP000867_1013(CP000867|pid:none) Methanococcus maripaludis C6, c... 200 9e-63 (Q9V287) RecName: Full=Proteasome-activating nucleotidase; AltNa... 196 9e-63 AE013599_464(AE013599|pid:none) Drosophila melanogaster chromoso... 204 1e-62 (Q86JA1) RecName: Full=26S protease regulatory subunit 7; AltNam... 201 1e-62 CP000099_389(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 202 1e-62 T48743(T48743)probable 26S ATP/ubiquitin-dependent proteinase ch... 197 1e-62 CP000682_2236(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 199 1e-62 AM920437_1474(AM920437|pid:none) Penicillium chrysogenum Wiscons... 197 2e-62 (Q9HNP9) RecName: Full=Proteasome-activating nucleotidase 1; Alt... 202 2e-62 CP000743_1018(CP000743|pid:none) Methanococcus aeolicus Nankai-3... 189 2e-62 CR936257_2506(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 201 2e-62 (Q8U4H3) RecName: Full=Proteasome-activating nucleotidase; AltNa... 194 2e-62 (Q9HRW6) RecName: Full=Proteasome-activating nucleotidase 2; Alt... 203 2e-62 CP001325_312(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 194 2e-62 DQ202368_1(DQ202368|pid:none) Schistosoma mansoni 26S proteasome... 241 3e-62 BC041186_1(BC041186|pid:none) Xenopus laevis proteasome 26S ATPa... 201 3e-62 AF227504_1(AF227504|pid:none) Trypanosoma brucei proteasome regu... 200 3e-62 BT075118_1(BT075118|pid:none) Osmerus mordax clone omor-rgc-504-... 201 4e-62 BC053187_1(BC053187|pid:none) Danio rerio proteasome (prosome, m... 201 4e-62 AJ719466_1(AJ719466|pid:none) Gallus gallus mRNA for hypothetica... 201 4e-62 (P35998) RecName: Full=26S protease regulatory subunit 7; AltNam... 201 4e-62 EU446703_1(EU446703|pid:none) Synthetic construct Homo sapiens c... 201 4e-62 AB075520_1(AB075520|pid:none) Homo sapiens neuroblastoma cDNA, c... 201 4e-62 AC093701_1(AC093701|pid:none) Homo sapiens BAC clone RP11-1252L1... 201 4e-62 AK298821_1(AK298821|pid:none) Homo sapiens cDNA FLJ52353 complet... 201 4e-62 BC061542_1(BC061542|pid:none) Rattus norvegicus proteasome (pros... 200 5e-62 (P46507) RecName: Full=26S protease regulatory subunit 6B; AltNa... 194 5e-62 DQ443126_1(DQ443126|pid:none) Bombyx mori 26S protease regulator... 194 7e-62 CR954203_112(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 194 9e-62 (Q63347) RecName: Full=26S protease regulatory subunit 7; AltNam... 199 9e-62 FN357312_3(FN357312|pid:none) Schistosoma mansoni genome sequenc... 199 9e-62 AY814884_1(AY814884|pid:none) Schistosoma japonicum SJCHGC09284 ... 199 9e-62 CP000477_446(CP000477|pid:none) Methanosaeta thermophila PT, com... 196 9e-62 DQ202365_1(DQ202365|pid:none) Schistosoma mansoni 26S proteasome... 199 9e-62 FN314955_1(FN314955|pid:none) Schistosoma japonicum isolate Anhu... 199 9e-62 FN357538_19(FN357538|pid:none) Schistosoma mansoni genome sequen... 195 1e-61 EF147477_1(EF147477|pid:none) Populus trichocarpa clone WS01231_... 194 1e-61 AB170960_1(AB170960|pid:none) Macaca fascicularis brain cDNA clo... 221 1e-61 (O64982) RecName: Full=26S protease regulatory subunit 7; AltNam... 198 2e-61 EF676518_1(EF676518|pid:none) Picea sitchensis clone WS02740_E13... 198 2e-61 (Q975U2) RecName: Full=Proteasome-activating nucleotidase; AltNa... 197 2e-61 AE010299_4017(AE010299|pid:none) Methanosarcina acetivorans str.... 200 2e-61 EF148658_1(EF148658|pid:none) Populus trichocarpa x Populus delt... 194 2e-61 BT042644_1(BT042644|pid:none) Zea mays full-length cDNA clone ZM... 198 2e-61 AY750867_1(AY750867|pid:none) Toxoptera citricida 26S protease r... 200 3e-61 BC080137_1(BC080137|pid:none) Xenopus tropicalis 26S protease re... 198 3e-61 FN314957_1(FN314957|pid:none) Schistosoma japonicum isolate Anhu... 197 3e-61 AY243360_1(AY243360|pid:none) Lactuca sativa clone 2 26S proteas... 197 3e-61 CR936257_759(CR936257|pid:none) Natronomonas pharaonis DSM 2160 ... 202 3e-61 BT078547_1(BT078547|pid:none) Lepeophtheirus salmonis Pacific fo... 196 4e-61 AK071476_1(AK071476|pid:none) Oryza sativa Japonica Group cDNA c... 192 4e-61 AE008384_798(AE008384|pid:none) Methanosarcina mazei strain Goe1... 199 4e-61 FB781798_1(FB781798|pid:none) Sequence 1071 from Patent WO200803... 193 4e-61 AB070253_1(AB070253|pid:none) Oryza sativa Japonica Group OsRPT3... 192 4e-61 AL590447_19(AL590447|pid:none) chromosome VII of strain GB-M1 of... 201 5e-61 AL954724_8(AL954724|pid:none) Zebrafish DNA sequence from clone ... 193 6e-61 CR940353_23(CR940353|pid:none) Theileria annulata strain Ankara ... 196 6e-61 AM910987_174(AM910987|pid:none) Plasmodium knowlesi strain H chr... 195 6e-61 CP001399_1810(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 194 6e-61 AY891401_1(AY891401|pid:none) Synthetic construct Homo sapiens c... 192 1e-60 (P43686) RecName: Full=26S protease regulatory subunit 6B; AltNa... 192 1e-60 (Q63570) RecName: Full=26S protease regulatory subunit 6B; AltNa... 192 1e-60 (P54778) RecName: Full=26S protease regulatory subunit 6B homolo... 191 1e-60 A99111(A99111) 26S proteasome AAA-ATPase subunit [imported] - Gu... 202 1e-60 AF020736_1(AF020736|pid:none) Homo sapiens ATPase homolog mRNA, ... 192 1e-60 BC080888_1(BC080888|pid:none) Xenopus tropicalis proteasome (pro... 192 1e-60 AK050677_1(AK050677|pid:none) Mus musculus 9 days embryo whole b... 192 1e-60 EF146866_1(EF146866|pid:none) Populus trichocarpa clone WS0121_F... 194 1e-60 AY229998_1(AY229998|pid:none) Sulfolobus acidocaldarius strain D... 191 1e-60 BC060362_1(BC060362|pid:none) Xenopus laevis proteasome 26S ATPa... 192 2e-60 AB033536_1(AB033536|pid:none) Oryza sativa Japonica Group OsRPT4... 194 2e-60 EF676776_1(EF676776|pid:none) Picea sitchensis clone WS02751_M22... 194 2e-60 BT075424_1(BT075424|pid:none) Osmerus mordax clone omor-eva-511-... 191 2e-60 BT078140_1(BT078140|pid:none) Lepeophtheirus salmonis Pacific fo... 190 2e-60 (P46502) RecName: Full=Probable 26S protease regulatory subunit ... 189 3e-60 CP000102_1167(CP000102|pid:none) Methanosphaera stadtmanae DSM 3... 195 3e-60 AK063158_1(AK063158|pid:none) Oryza sativa Japonica Group cDNA c... 194 3e-60 AC007915_8(AC007915|pid:none) Genomic sequence for Arabidopsis t... 193 3e-60 FB781812_1(FB781812|pid:none) Sequence 1085 from Patent WO200803... 193 3e-60 AB070254_1(AB070254|pid:none) Oryza sativa Japonica Group OsRPT4... 194 3e-60 CR954203_337(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 196 4e-60 BT040547_1(BT040547|pid:none) Zea mays full-length cDNA clone ZM... 192 4e-60 BT067445_1(BT067445|pid:none) Zea mays full-length cDNA clone ZM... 192 4e-60 CP000575_899(CP000575|pid:none) Staphylothermus marinus F1, comp... 192 4e-60 AM424422_1(AM424422|pid:none) Vitis vinifera contig VV78X256011.... 192 4e-60 FB781814_1(FB781814|pid:none) Sequence 1087 from Patent WO200803... 192 4e-60 BC055215_1(BC055215|pid:none) Danio rerio proteasome (prosome, m... 190 5e-60 CR940353_129(CR940353|pid:none) Theileria annulata strain Ankara... 190 8e-60 (P54775) RecName: Full=26S protease regulatory subunit 6B; AltNa... 189 8e-60 AC104496_3(AC104496|pid:none) Trypanosoma cruzi strain CL Brener... 188 8e-60 CP000583_331(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 195 8e-60 AM910996_49(AM910996|pid:none) Plasmodium knowlesi strain H chro... 196 8e-60 CP000254_1009(CP000254|pid:none) Methanospirillum hungatei JF-1,... 194 8e-60 AK160644_1(AK160644|pid:none) Mus musculus 10, 11 days embryo wh... 192 1e-59 CT005251_22(CT005251|pid:none) Leishmania major strain Friedlin,... 187 1e-59 AM502230_19(AM502230|pid:none) Leishmania infantum chromosome 12. 187 1e-59 AM494949_23(AM494949|pid:none) Leishmania braziliensis chromosom... 187 1e-59 FB781856_1(FB781856|pid:none) Sequence 1129 from Patent WO200803... 191 1e-59 CP000559_1165(CP000559|pid:none) Methanocorpusculum labreanum Z,... 202 1e-59 AC125735_52(AC125735|pid:none) Leishmania major strain Friedlin ... 193 1e-59 CP000300_1963(CP000300|pid:none) Methanococcoides burtonii DSM 6... 187 2e-59 BT081387_1(BT081387|pid:none) Drosophila melanogaster LP16188 fu... 195 2e-59 DQ440423_1(DQ440423|pid:none) Aedes aegypti clone AET-5666 26S p... 194 2e-59 AE014298_899(AE014298|pid:none) Drosophila melanogaster chromoso... 195 2e-59 AY241962_1(AY241962|pid:none) Dermacentor variabilis 26S proteas... 192 2e-59 AY071182_1(AY071182|pid:none) Drosophila melanogaster RE23388 fu... 194 2e-59 CP000493_1096(CP000493|pid:none) Hyperthermus butylicus DSM 5456... 189 4e-59 BT016035_1(BT016035|pid:none) Drosophila melanogaster RE01104 fu... 189 4e-59 AF227502_1(AF227502|pid:none) Trypanosoma brucei proteasome regu... 190 4e-59 AE014297_1050(AE014297|pid:none) Drosophila melanogaster chromos... 189 4e-59 CP000883_64(CP000883|pid:none) Hemiselmis andersenii chromosome ... 194 5e-59 AL844509_63(AL844509|pid:none) Plasmodium falciparum 3D7 chromos... 195 5e-59 CR380951_271(CR380951|pid:none) Candida glabrata strain CBS138 c... 191 7e-59 FM992688_493(FM992688|pid:none) Candida dubliniensis CD36 chromo... 191 7e-59 CR382130_469(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 192 7e-59 AP007155_52(AP007155|pid:none) Aspergillus oryzae RIB40 genomic ... 184 9e-59 CP001338_484(CP001338|pid:none) Candidatus Methanosphaerula palu... 194 9e-59 T49507(T49507)probable 26S proteasome regulatory particle chain ... 192 1e-58 T39558(T39558)26S proteinase regulatory subunit 7 - fission yeas... 192 1e-58 EZ000460_1(EZ000460|pid:none) TSA: Culex tarsalis Ctar-313 26S p... 191 1e-58 BX538352_118(BX538352|pid:none) Cryptosporidium parvum chromosom... 188 2e-58 CP001326_453(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 184 3e-58 CR382137_302(CR382137|pid:none) Debaryomyces hansenii strain CBS... 190 3e-58 AM502240_55(AM502240|pid:none) Leishmania infantum chromosome 22. 185 5e-58 CT005261_55(CT005261|pid:none) Leishmania major strain Friedlin,... 185 5e-58 DQ443392_1(DQ443392|pid:none) Bombyx mori 26S proteasome regulat... 190 5e-58 AJ223384_1(AJ223384|pid:none) Manduca sexta mRNA for 26S proteas... 190 5e-58 BC073644_1(BC073644|pid:none) Xenopus laevis similar to proteaso... 186 5e-58 AY892558_1(AY892558|pid:none) Synthetic construct Homo sapiens c... 186 5e-58 BC097594_1(BC097594|pid:none) Xenopus laevis hypothetical protei... 186 5e-58 BC064227_1(BC064227|pid:none) Xenopus tropicalis proteasome (pro... 186 5e-58 BC057997_1(BC057997|pid:none) Mus musculus proteasome (prosome, ... 186 5e-58 BC107950_1(BC107950|pid:none) Rattus norvegicus proteasome (pros... 186 5e-58 BC025134_1(BC025134|pid:none) Mus musculus proteasome (prosome, ... 186 5e-58 AL844509_114(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 188 6e-58 AM494959_52(AM494959|pid:none) Leishmania braziliensis chromosom... 184 8e-58 (O17071) RecName: Full=Probable 26S protease regulatory subunit ... 189 8e-58 AF024493_9(AF024493|pid:none) Caenorhabditis elegans cosmid F23F... 189 8e-58 AP007167_353(AP007167|pid:none) Aspergillus oryzae RIB40 genomic... 189 1e-57 AM270035_12(AM270035|pid:none) Aspergillus niger contig An02c041... 189 1e-57 AY814317_1(AY814317|pid:none) Schistosoma japonicum SJCHGC06030 ... 188 1e-57 BT077925_1(BT077925|pid:none) Lepeophtheirus salmonis Pacific fo... 187 2e-57 BT083190_1(BT083190|pid:none) Anoplopoma fimbria clone afim-evh-... 184 2e-57 CQ840920_1(CQ840920|pid:none) Sequence 15 from Patent EP1439230.... 184 2e-57 (Q8SQI9) RecName: Full=26S protease regulatory subunit 6B homolo... 187 2e-57 CP000881_144(CP000881|pid:none) Hemiselmis andersenii chromosome... 191 2e-57 BT043940_1(BT043940|pid:none) Salmo salar clone HM4_1948 proteas... 186 3e-57 BT080753_1(BT080753|pid:none) Caligus clemensi clone ccle-evs-52... 186 4e-57 AP007155_599(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 179 5e-57 BT077020_1(BT077020|pid:none) Caligus rogercresseyi clone crog-e... 181 1e-56 CP000816_585(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, co... 187 1e-56 BT079180_1(BT079180|pid:none) Esox lucius clone eluc-evq-511-062... 184 1e-56 EU188624_3(EU188624|pid:none) Giardia intestinalis isolate JH hy... 191 1e-56 EU188625_3(EU188625|pid:none) Giardia intestinalis isolate 55 hy... 191 1e-56 AK014354_1(AK014354|pid:none) Mus musculus 17 days embryo head c... 182 1e-56 CU633899_420(CU633899|pid:none) Podospora anserina genomic DNA c... 180 1e-56 (O74445) RecName: Full=Probable 26S protease subunit rpt4; &CU3... 180 1e-56 AM118080_27(AM118080|pid:none) Ustilago hordei mating type regio... 185 1e-56 BX908789_22(BX908789|pid:none) Neurospora crassa DNA linkage gro... 176 2e-56 AJ010592_143(AJ010592|pid:none) Guillardia theta DNA for complet... 187 2e-56 CP000589_215(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 178 3e-56 BT079937_1(BT079937|pid:none) Esox lucius clone eluc-evq-527-020... 182 3e-56 DQ206974_1(DQ206974|pid:none) Schistosoma mansoni 26S proteasome... 184 3e-56 AE014297_1051(AE014297|pid:none) Drosophila melanogaster chromos... 189 5e-56 AE017342_397(AE017342|pid:none) Cryptococcus neoformans var. neo... 179 5e-56 EU016618_25(EU016618|pid:none) Uncultured marine microorganism H... 182 9e-56 AF083031_110(AF083031|pid:none) Guillardia theta nucleomorph chr... 182 1e-55 AF115331_1(AF115331|pid:none) Amblyomma americanum 26S protease ... 219 2e-55 AB070252_1(AB070252|pid:none) Oryza sativa Japonica Group OsRPT1... 198 2e-55 CR380957_379(CR380957|pid:none) Candida glabrata strain CBS138 c... 175 3e-55 FM992695_364(FM992695|pid:none) Candida dubliniensis CD36 chromo... 175 3e-55 FN392322_403(FN392322|pid:none) Pichia pastoris GS115 chromosome... 175 4e-55 CR382130_485(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 176 4e-55 CR382138_643(CR382138|pid:none) Debaryomyces hansenii strain CBS... 177 1e-54 FM992689_281(FM992689|pid:none) Candida dubliniensis CD36 chromo... 174 1e-54 AB170497_1(AB170497|pid:none) Macaca fascicularis brain cDNA clo... 176 1e-54 AC159413_35(AC159413|pid:none) Trypanosoma brucei chromosome 7 c... 177 2e-54 AY208828_1(AY208828|pid:none) Rhipicephalus appendiculatus prote... 175 2e-54 AB209036_1(AB209036|pid:none) Homo sapiens mRNA for proteasome 2... 167 2e-54 AJ297368_1(AJ297368|pid:none) Giardia lamblia partial s4 gene fo... 191 2e-54 CU928168_500(CU928168|pid:none) Kluyveromyces thermotolerans str... 171 3e-54 (P53549) RecName: Full=26S protease subunit RPT4; AltName: Full=... 170 6e-54 AE016819_627(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 171 1e-53 CR380957_405(CR380957|pid:none) Candida glabrata strain CBS138 c... 169 2e-53 BC030840_1(BC030840|pid:none) Mus musculus protease (prosome, ma... 162 4e-53 CU928171_100(CU928171|pid:none) Kluyveromyces thermotolerans str... 169 5e-53 CR382123_278(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 168 1e-52 CU928178_509(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 171 2e-52 AJ871357_1(AJ871357|pid:none) Nyctotherus ovalis partial gene fo... 209 2e-52 EF575938_1(EF575938|pid:none) Oryza sativa (indica cultivar-grou... 206 9e-52 AJ010592_72(AJ010592|pid:none) Guillardia theta DNA for complete... 172 1e-51 AE016814_74(AE016814|pid:none) Ashbya gossypii (= Eremothecium g... 166 2e-51 CP000882_30(CP000882|pid:none) Hemiselmis andersenii chromosome ... 169 8e-51 (Q2FQ56) RecName: Full=Proteasome-activating nucleotidase; AltNa... 202 1e-50 AC147002_2(AC147002|pid:none) Medicago truncatula clone mth2-151... 156 3e-50 BC094063_1(BC094063|pid:none) Mus musculus proteasome (prosome, ... 192 1e-47 (Q58556) RecName: Full=Cell division cycle protein 48 homolog MJ... 151 2e-47 BA000001_713(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, c... 153 4e-47 AJ248284_97(AJ248284|pid:none) Pyrococcus abyssi complete genome... 153 5e-47 B71196(B71196) probable transitional endoplasmic reticulum ATPas... 152 7e-47 (O28972) RecName: Full=Cell division cycle protein 48 homolog AF... 149 2e-46 CP000477_76(CP000477|pid:none) Methanosaeta thermophila PT, comp... 146 3e-46 CP000505_671(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 151 3e-46 BX950229_176(BX950229|pid:none) Methanococcus maripaludis strain... 149 4e-46 CP000493_291(CP000493|pid:none) Hyperthermus butylicus DSM 5456,... 144 6e-46 CP001398_1690(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 150 7e-46 AE009950_963(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co... 149 2e-45 AY596297_1361(AY596297|pid:none) Haloarcula marismortui ATCC 430... 147 2e-45 AB018433_1(AB018433|pid:none) Pyrococcus kodakaraensis Pk-cdcA g... 146 3e-45 CP001338_250(CP001338|pid:none) Candidatus Methanosphaerula palu... 143 3e-45 CP000477_519(CP000477|pid:none) Methanosaeta thermophila PT, com... 147 4e-45 CP000682_210(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 147 5e-45 AM180088_1780(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 142 5e-45 CP001398_1723(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 146 6e-45 CP000855_1119(CP000855|pid:none) Thermococcus onnurineus NA1, co... 147 6e-45 CP000102_1047(CP000102|pid:none) Methanosphaera stadtmanae DSM 3... 150 6e-45 (Q9HPF0) RecName: Full=Protein cdcH; &AE004437_1275(AE004437|pi... 144 8e-45 CU234118_1203(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 147 8e-45 AE017261_456(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 150 1e-44 CP000866_11(CP000866|pid:none) Nitrosopumilus maritimus SCM1, co... 141 1e-44 CP000924_542(CP000924|pid:none) Thermoanaerobacter pseudethanoli... 156 1e-44 CP000923_1009(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 156 1e-44 AY255679_4(AY255679|pid:none) Sulfolobus acidocaldarius DSM 639 ... 145 1e-44 AM180088_2248(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 144 2e-44 CP000493_1304(CP000493|pid:none) Hyperthermus butylicus DSM 5456... 146 2e-44 CP000562_1555(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 137 2e-44 GM015171_186(GM015171|pid:none) Sequence 1 from Patent EP1923464. 144 3e-44 AP006878_1158(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 144 3e-44 CP000159_1774(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 160 5e-44 AE008691_1853(AE008691|pid:none) Thermoanaerobacter tengcongensi... 152 5e-44 AY574576_1(AY574576|pid:none) Cricetulus griseus ATPase 3 mRNA, ... 181 5e-44 A69086(A69086) cell division control protein Cdc48 - Methanobact... 144 7e-44 AE010299_4460(AE010299|pid:none) Methanosarcina acetivorans str.... 138 8e-44 CP000575_1105(CP000575|pid:none) Staphylothermus marinus F1, com... 140 8e-44 CP000866_101(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 142 8e-44 DQ118121_1(DQ118121|pid:none) Lupinus albus 26S proteasome ATPas... 180 9e-44 CP000780_2417(CP000780|pid:none) Candidatus Methanoregula boonei... 137 1e-43 CP000591_197(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 156 1e-43 AM114193_2109(AM114193|pid:none) Uncultured methanogenic archaeo... 147 1e-43 CP001399_1960(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 143 1e-43 AE009439_486(AE009439|pid:none) Methanopyrus kandleri AV19, comp... 139 2e-43 AE008384_1256(AE008384|pid:none) Methanosarcina mazei strain Goe... 138 2e-43 CP000609_1479(CP000609|pid:none) Methanococcus maripaludis C5, c... 140 2e-43 CR936257_1989(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 140 2e-43 CP000033_263(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 162 3e-43 CP001071_340(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 164 5e-43 AE000782_2073(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 136 5e-43 AY596297_693(AY596297|pid:none) Haloarcula marismortui ATCC 4304... 139 5e-43 (O19922) RecName: Full=Cell division protease ftsH homolog; ... 160 5e-43 EF215368_1(EF215368|pid:none) Callithrix jacchus clone G05-53.1_... 177 6e-43 CP001365_2346(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 150 7e-43 CP000099_888(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 136 7e-43 CP000968_194(CP000968|pid:none) Candidatus Korarchaeum cryptofil... 136 7e-43 CP000300_1888(CP000300|pid:none) Methanococcoides burtonii DSM 6... 139 7e-43 CP000742_1163(CP000742|pid:none) Methanococcus vannielii SB, com... 138 9e-43 EF558549_18(EF558549|pid:none) Halorubrum sp. TP009 clone 1 sequ... 138 9e-43 AE004438_162(AE004438|pid:none) Halobacterium sp. NRC-1 plasmid ... 139 1e-42 AP006628_307(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 153 3e-42 CP000816_691(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, co... 139 4e-42 CP000240_616(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 152 5e-42 CP001147_615(CP001147|pid:none) Thermodesulfovibrio yellowstonii... 157 5e-42 AF051251_1(AF051251|pid:none) Picea mariana TAT-binding protein ... 174 5e-42 CP000682_2198(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 139 6e-42 AJ006095_1(AJ006095|pid:none) Cicer arietinum mRNA for putative ... 174 6e-42 CP000660_1594(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135... 139 8e-42 CP001108_1731(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 147 8e-42 CP001399_1656(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 135 1e-41 CP001404_1031(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51... 135 1e-41 CP001014_1584(CP001014|pid:none) Thermoproteus neutrophilus V24S... 140 1e-41 AE009441_467(AE009441|pid:none) Pyrobaculum aerophilum str. IM2,... 137 1e-41 CU207366_2659(CU207366|pid:none) Gramella forsetii KT0803 comple... 153 1e-41 AM180088_1817(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 141 1e-41 CP000780_1589(CP000780|pid:none) Candidatus Methanoregula boonei... 128 2e-41 CP000561_1786(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 139 2e-41 CP000300_1547(CP000300|pid:none) Methanococcoides burtonii DSM 6... 137 2e-41 CP000413_267(CP000413|pid:none) Lactobacillus gasseri ATCC 33323... 156 2e-41 CP000781_3054(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 156 2e-41 CP000770_3(CP000770|pid:none) Candidatus Sulcia muelleri GWSS, c... 157 2e-41 AY593104_1(AY593104|pid:none) Bos grunniens proteasome 26S ATPas... 172 2e-41 CP001365_2041(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 139 2e-41 CP001276_442(CP001276|pid:none) Thermomicrobium roseum DSM 5159 ... 157 3e-41 AE015928_4005(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 156 3e-41 AP006841_776(AP006841|pid:none) Bacteroides fragilis YCH46 DNA, ... 156 3e-41 AP009384_528(AP009384|pid:none) Azorhizobium caulinodans ORS 571... 155 3e-41 CP001146_698(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 154 3e-41 CP000496_956(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 127 4e-41 AM114193_1763(AM114193|pid:none) Uncultured methanogenic archaeo... 138 4e-41 BA000023_415(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA, ... 138 4e-41 AE009441_2232(AE009441|pid:none) Pyrobaculum aerophilum str. IM2... 137 4e-41 CP000702_338(CP000702|pid:none) Thermotoga petrophila RKU-1, com... 148 4e-41 CP000559_1115(CP000559|pid:none) Methanocorpusculum labreanum Z,... 132 5e-41 CP000561_2090(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 136 5e-41 AE006470_296(AE006470|pid:none) Chlorobium tepidum TLS, complete... 145 5e-41 AY809862_1(AY809862|pid:none) Schistosoma japonicum SJCHGC04980 ... 171 5e-41 L17042_1(L17042|pid:none) Sulfolobus acidocaldarius ATPase gene,... 135 6e-41 CP001140_1067(CP001140|pid:none) Desulfurococcus kamchatkensis 1... 137 6e-41 BA000039_1831(BA000039|pid:none) Thermosynechococcus elongatus B... 147 6e-41 CP000239_2612(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 151 6e-41 AM429802_2(AM429802|pid:none) Vitis vinifera contig VV78X236944.... 170 7e-41 (O05209) RecName: Full=VCP-like ATPase; &AL445065_184(AL445065|... 142 8e-41 AE017198_285(AE017198|pid:none) Lactobacillus johnsonii NCC 533,... 155 8e-41 CP000698_2797(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 131 8e-41 CP000123_15(CP000123|pid:none) Mycoplasma capricolum subsp. capr... 150 8e-41 AE000512_571(AE000512|pid:none) Thermotoga maritima MSB8, comple... 148 8e-41 CP000969_350(CP000969|pid:none) Thermotoga sp. RQ2, complete gen... 148 8e-41
>AK167002_1(AK167002|pid:none) Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0027D13 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence. Length = 502
Score = 321 bits (822), Expect(2) = e-105 Identities = 160/191 (83%), Positives = 176/191 (92%) Frame = +2
Query: 320 ARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRF 499 ARACAAQT +T+LKLAGPQLVQMFIGDGAKLVRDAFALAKEK P+IIFIDELDAIGTKRF Sbjct: 300 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 359
Query: 500 DSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPL 679 DSE +GDREVQRTMLELLNQLDGF + +KVIAATNR+DILDPALLRSGRLDRKIEFP+ Sbjct: 360 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 419
Query: 680 PNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELI 859 PNEEARA I+QIHSRKMNVS DVN++ELAR ++DFNGAQ KAVCVEAGMIALRRG TEL Sbjct: 420 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 479
Query: 860 HNDFVEGCVEV 892 H D++EG +EV Sbjct: 480 HEDYMEGILEV 490
Score = 87.4 bits (215), Expect(2) = e-105 Identities = 38/45 (84%), Positives = 44/45 (97%) Frame = +3
Query: 171 LGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTG 305 +GGLDKQIQELVEA+VLPM HKE+FE++GI+PPKGVLMYGPPGTG Sbjct: 251 IGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTG 295
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 1,478,224,042 Number of extensions: 30845755 Number of successful extensions: 109902 Number of sequences better than 10.0: 2666 Number of HSP's gapped: 108151 Number of HSP's successfully gapped: 5574 Length of query: 357 Length of database: 1,051,180,864 Length adjustment: 130 Effective length of query: 227 Effective length of database: 630,428,194 Effective search space: 143107200038 Effective search space used: 143107200038 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
1 |
VH (FL, L) |
0 |
VF (FL, S) |
1 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
1 |
SS (DIR, S) |
1 |
SH (FL, L) |
0 |
SF (FL, S) |
3 |
CH (FL, L) |
0 |
CF (FL, S) |
1 |
FCL (DIR, L) |
1 |
FC (DIR, S) |
1 |
FC-IC (SUB) |
0 |