| Contig-U16093-1 |
| Contig ID |
Contig-U16093-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1020 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
4899973 |
| End point |
4899063 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
29 |
| Number of EST |
31 |
| Link to clone list |
U16093 |
| List of clone(s) |
est1=SSH884Z,1,594
est2=VSH825F,47,557
est3=SLD255E,52,728
est4=SLD679F,52,378
est5=SSJ541F,52,858
est6=VSD723F,52,705
est7=VSD875Z,60,700
est8=SSA331F,71,673
est9=SSA525F,77,690
est10=SSA536Z,85,740
est11=SSJ840E,96,715
est12=SSD536F,97,635
est13=FC-AN11E,124,751
est14=FC-AU02F,124,469
est15=SSF221F,125,801
est16=VSF294Z,136,699
est17=VSE134Z,147,737
est18=SSF161Z,154,717
est19=SSJ286E,236,736
est20=SSM178Z,291,840
est21=VSB223Z,299,856
est22=SSK446Z,302,845
est23=SSB346Z,328,737
est24=VSB544E,336,763
est25=FC-AU02Z,344,746
est26=SSL251F,352,730
est27=SSM858Z,402,746
est28=SSB545Z,404,818
est29=SSK127E,423,751
est30=SSG227E,482,720
est31=SLD679Z,859,1020
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 3.12 |
| Homology vs DNA |
Query= Contig-U16093-1 (Contig-U16093-1Q) /CSM_Contig/Contig-U16093-1Q.Seq.d
(1030 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU076328) Dictyostelium discoideum slug cDNA, clone SSA331. 519 0.0 3
(AU264463) Dictyostelium discoideum vegetative cDNA clone:VS... 519 0.0 3
(C89661) Dictyostelium discoideum slug cDNA, clone SSA536. 519 0.0 3
(C91224) Dictyostelium discoideum slug cDNA, clone SSJ840. 519 0.0 3
(C22927) Dictyostelium discoideum gamete cDNA, clone FC-AN11. 519 0.0 2
(AU264693) Dictyostelium discoideum vegetative cDNA clone:VS... 496 0.0 3
(AU265008) Dictyostelium discoideum vegetative cDNA clone:VS... 505 0.0 2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 359 0.0 7
(AU262896) Dictyostelium discoideum vegetative cDNA clone:VS... 519 0.0 2
(C92591) Dictyostelium discoideum slug cDNA, clone SSF161. 519 0.0 2
(AU038572) Dictyostelium discoideum slug cDNA, clone SSH884. 375 0.0 3
(AU052401) Dictyostelium discoideum slug cDNA, clone SLD255. 519 0.0 2
(AU268034) Dictyostelium discoideum vegetative cDNA clone:VS... 363 0.0 3
(C90901) Dictyostelium discoideum slug cDNA, clone SSJ286. 509 e-173 2
(AU261902) Dictyostelium discoideum vegetative cDNA clone:VS... 519 e-151 2
(AU262086) Dictyostelium discoideum vegetative cDNA clone:VS... 519 e-143 1
(AU038944) Dictyostelium discoideum slug cDNA, clone SSM178. 519 e-143 1
(C91563) Dictyostelium discoideum slug cDNA, clone SSK446. 519 e-143 1
(C93235) Dictyostelium discoideum slug cDNA, clone SSM858. 517 e-142 1
(AU037159) Dictyostelium discoideum slug cDNA, clone SSB545. 496 e-136 1
(C91363) Dictyostelium discoideum slug cDNA, clone SSK127. 478 e-130 1
(C24393) Dictyostelium discoideum gamete cDNA, clone FC-AU02. 472 e-128 1
(AU051864) Dictyostelium discoideum slug cDNA, clone SSB346. 359 e-123 2
(AU072154) Dictyostelium discoideum slug cDNA, clone SSD536. 414 e-111 1
(AU061287) Dictyostelium discoideum slug cDNA, clone SLD679. 363 e-106 2
(AU061115) Dictyostelium discoideum slug cDNA, clone SLD255. 363 e-106 2
(AU072685) Dictyostelium discoideum slug cDNA, clone SSA525. 363 e-106 2
(C24392) Dictyostelium discoideum gamete cDNA, clone FC-AU02. 361 e-103 2
(AU074553) Dictyostelium discoideum slug cDNA, clone SSL251. 379 e-100 1
(AU074110) Dictyostelium discoideum slug cDNA, clone SSJ541. 339 4e-99 2
(C89711) Dictyostelium discoideum slug cDNA, clone SSG227. 361 3e-95 1
(AU072844) Dictyostelium discoideum slug cDNA, clone SSF221. 202 2e-47 1
(AU052646) Dictyostelium discoideum slug cDNA, clone SLD679. 198 3e-46 1
(AU265007) Dictyostelium discoideum vegetative cDNA clone:VS... 56 4e-05 2
(AM848091) Nicotiana tabacum EST, clone nt002175091. 42 1e-04 2
(AM820119) Nicotiana tabacum EST, clone nt002162050. 42 1e-04 2
(DW273701) UI-S-GS1-act-m-08-0-UI.s1 UI-S-GS1 Euprymna scolo... 44 2e-04 2
(DY894386) CeleSEQ13945 Cunninghamella elegans pBluescript (... 38 0.28 3
(DY891950) CeleSEQ8718 Cunninghamella elegans pBluescript (E... 38 0.34 3
(FE248298) CAPH1605.rev CAPH Naegleria gruberi amoeba stage ... 38 0.47 2
(FE258248) CAPH7046.rev CAPH Naegleria gruberi amoeba stage ... 38 0.47 2
(FE259435) CAPH7689.rev CAPH Naegleria gruberi amoeba stage ... 38 0.48 2
(FE250643) CAPH2973.fwd CAPH Naegleria gruberi amoeba stage ... 38 0.48 2
(FE259436) CAPH7689.fwd CAPH Naegleria gruberi amoeba stage ... 38 0.48 2
(FE250642) CAPH2973.rev CAPH Naegleria gruberi amoeba stage ... 38 0.48 2
(FE250422) CAPH2842.rev CAPH Naegleria gruberi amoeba stage ... 38 0.48 2
(FE258249) CAPH7046.fwd CAPH Naegleria gruberi amoeba stage ... 38 0.48 2
(FE250423) CAPH2842.fwd CAPH Naegleria gruberi amoeba stage ... 38 0.48 2
(FC815833) Sr_pAMT7_04e21_T7 S. ratti mixed stage pAMP Stron... 48 0.66 1
(FC810427) Sr_pASP6_04e21_SP6 S. ratti mixed stage pAMP Stro... 48 0.66 1
(CU914218) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.6 1
(CL323722) RPCI44_458N18.r RPCI-44 Sus scrofa genomic clone ... 46 2.6 1
(FE658507) CBYZ9670.g1 CBYZ Panicum virgatum Kanlow 4 day ol... 46 2.6 1
(FE635929) CBYY13209.g1 CBYY Panicum virgatum Kanlow crown P... 46 2.6 1
(ES748739) BGBV-aad38e03.g1 Snail_EST_pSMART Biomphalaria gl... 36 6.2 2
>(AU076328) Dictyostelium discoideum slug cDNA, clone SSA331.
Length = 600
Score = 519 bits (262), Expect(3) = 0.0
Identities = 262/262 (100%)
Strand = Plus / Plus
Query: 401 gggatccagcttccgattatatggccggttacatgatgtttggtgccggtatcactgttg 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gggatccagcttccgattatatggccggttacatgatgtttggtgccggtatcactgttg 388
Query: 461 gtctttgtaatgttttttcaggtgtttgcgtaggtattgctggtagtggttgtgcattgg 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gtctttgtaatgttttttcaggtgtttgcgtaggtattgctggtagtggttgtgcattgg 448
Query: 521 gtgacgctcaaaatccatcactttttgttaaaatgcttattattgaaattttcgctggtg 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gtgacgctcaaaatccatcactttttgttaaaatgcttattattgaaattttcgctggtg 508
Query: 581 ccttaggtctttacgctgttattgtcggtattcttatgacaactaacgctcttggtgtca 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ccttaggtctttacgctgttattgtcggtattcttatgacaactaacgctcttggtgtca 568
Query: 641 cacaacaacctgcactcaaacc 662
||||||||||||||||||||||
Sbjct: 569 cacaacaacctgcactcaaacc 590
Score = 363 bits (183), Expect(3) = 0.0
Identities = 183/183 (100%)
Strand = Plus / Plus
Query: 123 agataataactattatgatcaaggtacttatttccttgtaactatatccccatcaacatg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 agataataactattatgatcaaggtacttatttccttgtaactatatccccatcaacatg 110
Query: 183 ggctgcacttggtattggcctttcattagccttatcagttgttggttcagcttggggtat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 ggctgcacttggtattggcctttcattagccttatcagttgttggttcagcttggggtat 170
Query: 243 ttgggtcactgcatcatcacttatgggtgctgccgttaaagaaccaagaattcgttcaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ttgggtcactgcatcatcacttatgggtgctgccgttaaagaaccaagaattcgttcaaa 230
Query: 303 aaa 305
|||
Sbjct: 231 aaa 233
Score = 56.0 bits (28), Expect(3) = 0.0
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 89 atgcctgatattaatccacttactccaa 116
||||||||||||||||||||||||||||
Sbjct: 19 atgcctgatattaatccacttactccaa 46
Score = 85.7 bits (43), Expect = 3e-12
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 869 aaattttcgttgttcccttaggtctttaccctgttattgccgntattcttttgccaacta 928
||||||||| || | |||||||||||||| ||||||||| || ||||||| || ||||||
Sbjct: 494 aaattttcgctggtgccttaggtctttacgctgttattgtcggtattcttatgacaacta 553
Query: 929 ccgctcttgttgtcacacaccaccctccactcaa 962
|||||||| ||||||||| || ||| |||||||
Sbjct: 554 acgctcttggtgtcacacaacaacctgcactcaa 587
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 567,503,501
Number of extensions: 28615373
Number of successful extensions: 1909128
Number of sequences better than 10.0: 55
Length of query: 1030
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1006
Effective length of database: 96,409,374,237
Effective search space: 96987830482422
Effective search space used: 96987830482422
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.20 |
| Homology vs Protein |
Query= Contig-U16093-1 (Contig-U16093-1Q) /CSM_Contig/Contig-U16093-1Q.Seq.d
(1030 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC116956_4(AC116956|pid:none) Dictyostelium discoideum chromosom... 320 1e-86
(Q2TA24) RecName: Full=V-type proton ATPase 21 kDa proteolipid s... 173 1e-41
AY892285_1(AY892285|pid:none) Synthetic construct Homo sapiens c... 173 1e-41
DQ347602_1(DQ347602|pid:none) Bos taurus clone H37 ATP6V0B mRNA,... 173 1e-41
DQ217212_1(DQ217212|pid:none) Taeniopygia guttata clone 0058P003... 172 1e-41
(Q91V37) RecName: Full=V-type proton ATPase 21 kDa proteolipid s... 171 3e-41
BC030393_1(BC030393|pid:none) Mus musculus ATPase, H+ transporti... 171 3e-41
EF146183_1(EF146183|pid:none) Populus trichocarpa clone WS0116_A... 170 7e-41
BC091622_1(BC091622|pid:none) Xenopus tropicalis ATPase, H+ tran... 170 9e-41
BT075706_1(BT075706|pid:none) Osmerus mordax clone omor-rgc-508-... 168 2e-40
EF214934_1(EF214934|pid:none) Callithrix jacchus clone I13-50.1_... 168 2e-40
BT046064_1(BT046064|pid:none) Salmo salar clone ssal-rgf-540-240... 168 3e-40
BT082548_1(BT082548|pid:none) Anoplopoma fimbria clone afim-evh-... 167 6e-40
BT082862_1(BT082862|pid:none) Anoplopoma fimbria clone afim-evh-... 165 2e-39
AM461480_5(AM461480|pid:none) Vitis vinifera contig VV78X276202.... 164 6e-39
AY226999_1(AY226999|pid:none) Citrus limon vacuolar membrane ATP... 164 6e-39
AY462241_1(AY462241|pid:none) Xerophyta viscosa V-ATPase subunit... 162 2e-38
AK059810_1(AK059810|pid:none) Oryza sativa Japonica Group cDNA c... 162 2e-38
AC006053_6(AC006053|pid:none) Arabidopsis thaliana chromosome 2 ... 161 4e-38
EF084521_1(EF084521|pid:none) Picea sitchensis clone WS0287_D02 ... 160 7e-38
CP000581_299(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 160 9e-38
CR954201_272(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 159 2e-37
CP001326_505(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 158 3e-37
AB000919_1(AB000919|pid:none) Caenorhabditis elegans mRNA for VH... 157 4e-37
AC008146_11(AC008146|pid:none) Trypanosoma brucei chromosome 6 c... 156 1e-36
DQ311242_1(DQ311242|pid:none) Bombyx mori vacuolar ATP synthase ... 156 1e-36
CU638744_455(CU638744|pid:none) Podospora anserina genomic DNA c... 155 2e-36
AK340112_1(AK340112|pid:none) Acyrthosiphon pisum ACYPI006833 mR... 154 4e-36
BT080643_1(BT080643|pid:none) Caligus clemensi clone ccle-evs-50... 152 2e-35
BT081013_1(BT081013|pid:none) Caligus clemensi clone ccle-evs-50... 151 3e-35
AP007161_230(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 149 1e-34
CT005267_390(CT005267|pid:none) Leishmania major strain Friedlin... 149 2e-34
BT080892_1(BT080892|pid:none) Caligus clemensi clone ccle-evs-52... 148 3e-34
AM494967_369(AM494967|pid:none) Leishmania braziliensis chromoso... 147 6e-34
FM992688_1216(FM992688|pid:none) Candida dubliniensis CD36 chrom... 144 7e-33
AE014297_1990(AE014297|pid:none) Drosophila melanogaster chromos... 142 1e-32
CU928179_660(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 142 2e-32
CR382137_692(CR382137|pid:none) Debaryomyces hansenii strain CBS... 141 3e-32
(P23968) RecName: Full=V-type proton ATPase subunit c''; ... 138 4e-31
AE016816_275(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 136 1e-30
CR380956_21(CR380956|pid:none) Candida glabrata strain CBS138 ch... 136 1e-30
CR940353_762(CR940353|pid:none) Theileria annulata strain Ankara... 130 6e-29
AM910993_168(AM910993|pid:none) Plasmodium knowlesi strain H chr... 129 1e-28
AM920436_293(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 125 2e-27
DQ347563_1(DQ347563|pid:none) Bos taurus H+-transporting lysosom... 119 2e-25
AY185518_1(AY185518|pid:none) Gossypium barbadense clone 1__2 pu... 105 3e-21
AK220736_1(AK220736|pid:none) Arabidopsis thaliana mRNA for H+-t... 93 2e-17
AY826922_1(AY826922|pid:none) Heterocapsa triquetra clone HTVATP... 92 3e-17
(Q26250) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 88 6e-16
EU930293_1(EU930293|pid:none) Simulium vittatum clone SV-524 vac... 88 6e-16
CR382132_1019(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 87 7e-16
(P31403) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 87 1e-15
(P55277) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 86 2e-15
(Q612A5) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 86 2e-15
S40714(S40714;T37236;T37270)probable H+-exporting ATPase (EC 3.6... 86 2e-15
(P34546) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 86 2e-15
(P54642) RecName: Full=V-type proton ATPase proteolipid subunit;... 86 2e-15
EF639070_1(EF639070|pid:none) Triatoma infestans clone TI-99 vac... 85 4e-15
DQ215922_1(DQ215922|pid:none) Taeniopygia guttata clone 0063P002... 85 4e-15
BT075745_1(BT075745|pid:none) Osmerus mordax clone omor-eva-507-... 85 5e-15
BT077411_1(BT077411|pid:none) Lepeophtheirus salmonis Pacific fo... 85 5e-15
BC152275_1(BC152275|pid:none) Danio rerio ATPase, H+ transportin... 85 5e-15
AE017351_329(AE017351|pid:none) Cryptococcus neoformans var. neo... 85 5e-15
AB003939_1(AB003939|pid:none) Acetabularia acetabulum mRNA for v... 85 5e-15
BC067156_1(BC067156|pid:none) Danio rerio ATPase, H+ transportin... 85 5e-15
FJ438503_1(FJ438503|pid:none) Epinephelus coioides atp6v0c-like ... 84 6e-15
BT022884_1(BT022884|pid:none) Drosophila melanogaster IP07464 fu... 84 6e-15
AB069689_1(AB069689|pid:none) Aspergillus oryzae vmaC gene for v... 84 6e-15
(Q03105) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 84 8e-15
EF082355_1(EF082355|pid:none) Picea sitchensis clone WS0278_L17 ... 84 8e-15
CU640366_298(CU640366|pid:none) Podospora anserina genomic DNA c... 84 8e-15
(P23956) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 84 8e-15
(O18882) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 84 8e-15
BC059745_1(BC059745|pid:none) Xenopus tropicalis ATPase, H+ tran... 84 8e-15
BC065849_1(BC065849|pid:none) Danio rerio zgc:77708, mRNA (cDNA ... 84 1e-14
AB003937_1(AB003937|pid:none) Acetabularia acetabulum mRNA for v... 84 1e-14
AF008924_1(AF008924|pid:none) Aedes aegypti V-ATPase C-subunit m... 84 1e-14
(Q17046) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 84 1e-14
(Q00607) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 84 1e-14
AM270019_29(AM270019|pid:none) Aspergillus niger contig An02c024... 83 1e-14
AY099523_1(AY099523|pid:none) Danio rerio vacuolar ATP synthase ... 83 1e-14
AE016818_273(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 83 1e-14
(P63081) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 83 1e-14
AM920433_163(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 83 1e-14
CR382138_506(CR382138|pid:none) Debaryomyces hansenii strain CBS... 83 2e-14
(O16110) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 83 2e-14
(Q24808) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 83 2e-14
FN392321_1069(FN392321|pid:none) Pichia pastoris GS115 chromosom... 82 2e-14
DQ443153_1(DQ443153|pid:none) Bombyx mori vacuolar H+ ATP syntha... 82 2e-14
AY892471_1(AY892471|pid:none) Synthetic construct Homo sapiens c... 82 2e-14
AE014296_2077(AE014296|pid:none) Drosophila melanogaster chromos... 82 2e-14
(Q24810) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 82 2e-14
(P27449) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 82 2e-14
BT032787_1(BT032787|pid:none) Drosophila melanogaster IP21224 fu... 82 2e-14
CR380955_60(CR380955|pid:none) Candida glabrata strain CBS138 ch... 82 2e-14
AP003263_18(AP003263|pid:none) Oryza sativa Japonica Group genom... 82 3e-14
BT051501_1(BT051501|pid:none) Medicago truncatula clone MTYF1_F2... 82 4e-14
AY343324_1(AY343324|pid:none) Apis mellifera vacuolar H+ ATP syn... 82 4e-14
EZ048856_1(EZ048856|pid:none) TSA: Stomoxys calcitrans SC-4-3-3 ... 82 4e-14
EF145656_1(EF145656|pid:none) Populus trichocarpa clone WS0112_F... 82 4e-14
CU928181_113(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 81 5e-14
CR382125_975(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 81 7e-14
BC050939_1(BC050939|pid:none) Mus musculus ATPase, H+ transporti... 81 7e-14
AB003940_1(AB003940|pid:none) Acetabularia acetabulum mRNA for v... 80 9e-14
AB003942_1(AB003942|pid:none) Acetabularia acetabulum mRNA for v... 80 9e-14
AB003941_1(AB003941|pid:none) Acetabularia acetabulum mRNA for v... 80 9e-14
CU928180_600(CU928180|pid:none) Kluyveromyces thermotolerans str... 80 9e-14
AY261522_1(AY261522|pid:none) Suaeda maritima subsp. salsa vacuo... 80 1e-13
AC148293_4(AC148293|pid:none) Medicago truncatula clone mth2-16c... 80 1e-13
(P23957) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 80 1e-13
BT040707_1(BT040707|pid:none) Zea mays full-length cDNA clone ZM... 80 1e-13
AF193814_1(AF193814|pid:none) Dendrobium crumenatum vacuolar H+-... 80 1e-13
AP004775_8(AP004775|pid:none) Oryza sativa Japonica Group genomi... 80 1e-13
AE013599_2514(AE013599|pid:none) Drosophila melanogaster chromos... 80 1e-13
(O22552) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 80 1e-13
(P59228) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 80 1e-13
(P68161) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 80 1e-13
(Q43434) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 80 1e-13
U13670_1(U13670|pid:none) Gossypium hirsutum vacuolar H+-ATPase ... 80 1e-13
AM430959_1(AM430959|pid:none) Vitis vinifera contig VV78X111633.... 80 1e-13
(Q40585) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 80 1e-13
AF022925_1(AF022925|pid:none) Vigna radiata adenosine triphospha... 80 1e-13
AK028239_1(AK028239|pid:none) Mus musculus adult male hippocampu... 80 1e-13
(P59227) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 80 1e-13
(Q96473) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 80 1e-13
BT071491_1(BT071491|pid:none) Picea sitchensis clone WS02917_E06... 80 2e-13
BT060909_1(BT060909|pid:none) Zea mays full-length cDNA clone ZM... 80 2e-13
X95752_1(X95752|pid:none) N.tabacum mRNA for c subunit of V-type... 80 2e-13
AF416606_1(AF416606|pid:none) Pennisetum glaucum vacuolar H+-ATP... 80 2e-13
CP001323_364(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 80 2e-13
AF286464_1(AF286464|pid:none) Porteresia coarctata V-ATPase subu... 80 2e-13
(Q21898) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 79 3e-13
AB028204_1(AB028204|pid:none) Porphyra yezoensis mRNA for vacuol... 78 6e-13
BT053364_1(BT053364|pid:none) Medicago truncatula clone MTYFP_FQ... 77 7e-13
CT005260_215(CT005260|pid:none) Leishmania major strain Friedlin... 77 7e-13
AM502239_155(AM502239|pid:none) Leishmania infantum chromosome 2... 77 7e-13
(Q43362) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 77 1e-12
CR940353_288(CR940353|pid:none) Theileria annulata strain Ankara... 77 1e-12
EF070596_1(EF070596|pid:none) Maconellicoccus hirsutus clone WHM... 77 1e-12
AM910992_133(AM910992|pid:none) Plasmodium knowlesi strain H chr... 75 3e-12
EZ000081_1(EZ000081|pid:none) TSA: Schistosoma japonicum SJCHGC0... 75 4e-12
AL844504_189(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 75 5e-12
AM494965_125(AM494965|pid:none) Leishmania braziliensis chromoso... 74 8e-12
FN357297_19(FN357297|pid:none) Schistosoma mansoni genome sequen... 74 1e-11
AJ566619_1(AJ566619|pid:none) Paramecium tetraurelia macronuclea... 73 1e-11
AJ566618_1(AJ566618|pid:none) Paramecium tetraurelia macronuclea... 73 1e-11
AJ566617_1(AJ566617|pid:none) Paramecium tetraurelia macronuclea... 72 4e-11
CR764090_1(CR764090|pid:none) Paramecium tetraurelia, complete g... 72 4e-11
AP007151_634(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 71 5e-11
PXBOV6(A31320;S05209)H+-exporting ATPase (EC 3.6.3.6), vacuolar,... 71 7e-11
U53182_1(U53182|pid:none) Pleurochrysis carterae V-type ATPase 1... 71 7e-11
(Q41773) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 70 9e-11
FN322091_1(FN322091|pid:none) Schistosoma japonicum isolate Anhu... 70 9e-11
CP001160_211(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 70 1e-10
FN315972_1(FN315972|pid:none) Schistosoma japonicum isolate Anhu... 70 2e-10
CR382131_1292(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 69 2e-10
AM502241_15(AM502241|pid:none) Leishmania infantum chromosome 23. 69 2e-10
AM494960_15(AM494960|pid:none) Leishmania braziliensis chromosom... 69 2e-10
CT005262_15(CT005262|pid:none) Leishmania major strain Friedlin,... 69 3e-10
(Q755G4) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 69 3e-10
(Q6CT28) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 69 3e-10
FN392320_734(FN392320|pid:none) Pichia pastoris GS115 chromosome... 67 8e-10
(P32842) RecName: Full=V-type proton ATPase subunit c'; ... 67 8e-10
(Q6FUY5) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 67 1e-09
(Q6BSB9) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 66 2e-09
CP000496_561(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 65 4e-09
CP001577_498(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 65 5e-09
DQ215926_1(DQ215926|pid:none) Taeniopygia guttata clone 0058P000... 65 5e-09
EF215006_1(EF215006|pid:none) Callithrix jacchus clone F16-53.4_... 63 1e-08
CU633899_306(CU633899|pid:none) Podospora anserina genomic DNA c... 63 1e-08
AM270216_16(AM270216|pid:none) Aspergillus niger contig An10c005... 62 2e-08
(Q9Y874) RecName: Full=V-type proton ATPase 16 kDa proteolipid s... 62 4e-08
DQ215924_1(DQ215924|pid:none) Taeniopygia guttata clone 0058P003... 60 9e-08
AE009439_1013(AE009439|pid:none) Methanopyrus kandleri AV19, com... 59 4e-07
CP000582_265(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 57 8e-07
AJ238275_1(AJ238275|pid:none) Beta vulgaris partial BVA-16/2 gen... 56 2e-06
EF145359_1(EF145359|pid:none) Populus trichocarpa clone WS01123_... 54 9e-06
M95063_1(M95063|pid:none) Zea mays putative proteolipid subunit ... 51 6e-05
CP000743_60(CP000743|pid:none) Methanococcus aeolicus Nankai-3, ... 50 2e-04
BT056872_1(BT056872|pid:none) Salmo salar clone ssal-eve-523-078... 49 3e-04
(Q57674) RecName: Full=Probable ATPase proteolipid chain; &F643... 49 4e-04
CP000742_357(CP000742|pid:none) Methanococcus vannielii SB, comp... 48 5e-04
CP000102_1100(CP000102|pid:none) Methanosphaera stadtmanae DSM 3... 48 6e-04
X92375_1(X92375|pid:none) Z.mays mRNA for V-type H+-ATPase, clon... 46 0.002
EF373537_1(EF373537|pid:none) Cucumis sativus vacuolar ATPase su... 46 0.002
BA000016_1642(BA000016|pid:none) Clostridium perfringens str. 13... 44 0.007
CP001056_2787(CP001056|pid:none) Clostridium botulinum B str. Ek... 44 0.009
CP000504_1041(CP000504|pid:none) Pyrobaculum islandicum DSM 4184... 44 0.009
S65527(S65527;S65526;S72454) H+-exporting ATPase (EC 3.6.3.6) ch... 44 0.012
EU152211_1(EU152211|pid:none) Dendrobium hybrid cultivar Khao Sa... 43 0.020
AE009441_514(AE009441|pid:none) Pyrobaculum aerophilum str. IM2,... 43 0.020
CP000896_943(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 43 0.020
CP001145_636(CP001145|pid:none) Coprothermobacter proteolyticus ... 43 0.020
CP001014_14(CP001014|pid:none) Thermoproteus neutrophilus V24Sta... 42 0.035
(A5FRR4) RecName: Full=ATP synthase subunit c; AltName: Full=ATP... 41 0.060
AP006878_1599(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 41 0.060
CP001098_1927(CP001098|pid:none) Halothermothrix orenii H 168, c... 41 0.060
AE005672_1243(AE005672|pid:none) Streptococcus pneumoniae TIGR4,... 41 0.078
CP000300_1137(CP000300|pid:none) Methanococcoides burtonii DSM 6... 40 0.10
AP008971_1169(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA... 40 0.10
CP001146_1327(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 40 0.10
CP000885_3042(CP000885|pid:none) Clostridium phytofermentans ISD... 40 0.13
AE009951_235(AE009951|pid:none) Fusobacterium nucleatum subsp. n... 40 0.17
(Q2LRB9) RecName: Full=ATP synthase subunit c; AltName: Full=ATP... 39 0.23
CP001251_1438(CP001251|pid:none) Dictyoglomus turgidum DSM 6724,... 39 0.30
CP001322_4280(CP001322|pid:none) Desulfatibacillum alkenivorans ... 39 0.39
(A7I137) RecName: Full=ATP synthase subunit c; AltName: Full=ATP... 39 0.39
(Q2RFX4) RecName: Full=ATP synthase subunit c; AltName: Full=ATP... 38 0.66
CP000660_18(CP000660|pid:none) Pyrobaculum arsenaticum DSM 13514... 37 0.86
CP001399_1520(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 37 0.86
CP001279_29(CP001279|pid:none) Nautilia profundicola AmH, comple... 37 0.86
CP001400_1419(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 37 0.86
AY620960_1(AY620960|pid:none) Pennisetum glaucum truncated vacuo... 37 1.1
CP000524_1108(CP000524|pid:none) Bartonella bacilliformis KC583,... 37 1.1
EU742836_1(EU742836|pid:none) Amphidinium carterae strain CCMP13... 37 1.1
(Q4J8L5) RecName: Full=Membrane-associated ATPase C chain; &CP0... 37 1.1
AE017199_215(AE017199|pid:none) Nanoarchaeum equitans Kin4-M, co... 37 1.5
EF134011_1(EF134011|pid:none) Alexandrium affine strain CCMP112 ... 36 1.9
CP001230_35(CP001230|pid:none) Persephonella marina EX-H1, compl... 36 2.5
AE009949_118(AE009949|pid:none) Streptococcus pyogenes MGAS8232,... 35 3.3
(B4U8V5) RecName: Full=ATP synthase subunit c; AltName: Full=ATP... 35 3.3
AX970615_1(AX970615|pid:none) Sequence 1418 from Patent EP1104808. 35 3.3
(Q30TH1) RecName: Full=ATP synthase subunit c; AltName: Full=ATP... 35 3.3
AE000666_946(AE000666|pid:none) Methanothermobacter thermautotro... 35 4.3
CP000524_1112(CP000524|pid:none) Bartonella bacilliformis KC583,... 35 4.3
CP000127_1992(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 35 4.3
AL009126_3515(AL009126|pid:none) Bacillus subtilis subsp. subtil... 35 4.3
AL954747_463(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 35 5.5
CP000682_1883(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 35 5.6
EF134006_1(EF134006|pid:none) Alexandrium tamarense strain CB307... 35 5.6
AE004092_109(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 35 5.6
CP000259_129(CP000259|pid:none) Streptococcus pyogenes MGAS9429,... 35 5.6
CP000939_2618(CP000939|pid:none) Clostridium botulinum B1 str. O... 34 7.3
EF134007_1(EF134007|pid:none) Alexandrium tamarense strain CB307... 34 7.3
EU742826_1(EU742826|pid:none) Amphidinium carterae strain CCMP13... 34 7.3
AE014296_726(AE014296|pid:none) Drosophila melanogaster chromoso... 34 7.3
(P62021) RecName: Full=Membrane-associated ATPase C chain; AltNa... 34 7.3
CP000852_1865(CP000852|pid:none) Caldivirga maquilingensis IC-16... 34 7.3
EF134008_1(EF134008|pid:none) Alexandrium tamarense strain CB307... 34 7.3
CR382135_227(CR382135|pid:none) Debaryomyces hansenii strain CBS... 34 7.3
AY826871_1(AY826871|pid:none) Heterocapsa triquetra clone HTAPPH... 34 9.5
GN107021_1(GN107021|pid:none) Sequence 11802 from Patent WO20090... 34 9.5
CP001101_2406(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 34 9.5
CP001358_2230(CP001358|pid:none) Desulfovibrio desulfuricans sub... 34 9.5
AE017283_75(AE017283|pid:none) Propionibacterium acnes KPA171202... 34 9.5
EF134009_1(EF134009|pid:none) Alexandrium affine strain CCMP112 ... 34 9.5
AY884253_1(AY884253|pid:none) Heterocapsa triquetra chloroplast ... 34 9.5
EU742840_1(EU742840|pid:none) Amphidinium carterae strain CCMP13... 34 9.5
AY884251_1(AY884251|pid:none) Heterocapsa triquetra chloroplast ... 34 9.5
>AC116956_4(AC116956|pid:none) Dictyostelium discoideum chromosome 2
map 1418423-1684967 strain AX4, complete sequence.
Length = 191
Score = 320 bits (820), Expect(2) = 1e-86
Identities = 162/180 (90%), Positives = 162/180 (90%)
Frame = +1
Query: 124 DNNYYDQGTYFLVTISPSTWXXXXXXXXXXXXXXXXXWGIWVTASSLMGAAVKEPRIRSK 303
DNNYYDQ TYFLVTISPSTW WGIWVTASSLMGAAVKEPRIRSK
Sbjct: 12 DNNYYDQCTYFLVTISPSTWAALGIGLSLALSVVGSAWGIWVTASSLMGAAVKEPRIRSK 71
Query: 304 NIISIIFCEAVAIYGIILAIILNGKIDKFLNIWDPASDYMAGYMMFGAGITVGLCNVFSG 483
NIISIIFCEAVAIYGIILAIILNGKIDKFLNIWDPASDYMAGYMMFGAGITVGLCNVFSG
Sbjct: 72 NIISIIFCEAVAIYGIILAIILNGKIDKFLNIWDPASDYMAGYMMFGAGITVGLCNVFSG 131
Query: 484 VCVGIAGSGCALGDAQNPSLFVKMLIIEIFAGALGLYAVIVGILMTTNALGVTQQPALKP 663
VCVGIAGSGCALGDAQNPSLFVKMLIIEIFAGALGLYAVIVGILMTTNALGVTQQPALKP
Sbjct: 132 VCVGIAGSGCALGDAQNPSLFVKMLIIEIFAGALGLYAVIVGILMTTNALGVTQQPALKP 191
Score = 24.3 bits (51), Expect(2) = 1e-86
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2
Query: 89 MPDINPLTP 115
MPDINPLTP
Sbjct: 1 MPDINPLTP 9
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,289,563,565
Number of extensions: 22438355
Number of successful extensions: 66556
Number of sequences better than 10.0: 249
Number of HSP's gapped: 66171
Number of HSP's successfully gapped: 290
Length of query: 343
Length of database: 1,051,180,864
Length adjustment: 129
Effective length of query: 214
Effective length of database: 633,664,753
Effective search space: 135604257142
Effective search space used: 135604257142
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
7 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
2 |
| SS (DIR, S) |
18 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
2 |
| FC-IC (SUB) |
0 |