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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U16102-1
Contig ID Contig-U16102-1
Contig update 2004. 6.11
Contig sequence 
>Contig-U16102-1 (Contig-U16102-1Q) /CSM_Contig/Contig-U16102-1Q.Seq.d
ATTCATCAACAAGGTTTAATGGTTTCATTAAAGTGTTTTAAATCACCATC
TCTCTTTCAAAGAAATGCGGGTCTCAATGATATAATTAGATTTTGTAAAT
CAGAAAGTAATAGTAACAATAGTAGTTTTATGTTAAGAAATCAACAATTT
TCAATTTATGTAGCACCACATAAAATTGTTGAATGGTTAAAAGAAAATCA
AGTTGTTGAATTATTATATGGTGAAACAAGTCATATTCAATTATTACAAA
AATGTACAGATATATTAAAATTCCTTGCAGAACAAAAAGCATTTGATAGA
AAGTATTTAGACTTGATATGGTCAGCATCTGAAGGAAAACATGAAACAAT
AGAGAATGCAATCTATGATACGTATTGGAGCGATCGCTCCATTACTTCCA
CCTGAAGATATCGATTATCTCTTTGACAAGGTTCAAATGATTCCCTACAA
TCATTACACTCAAATAACATTGAATTTAGTACGTTCATTAACTCAAAGAC
AACAACAAGCCACCAATTCCGATGGTATTACATCAAGAGGTTTGGATATA
TTTTGGAATTTAATGCAAGAAGATTGTGATGTTTGTAATGATCTCTCCAA
TGCATCATTGGTTTCACTTCAAGATTCTTTCCAATTCTATCCAAATCAAA
GGGGACATTTTTTAACTAGAGCCTTGGACCATATAGATAAACATCGTTCA
GTTGTAGTTTCACTTCGTTTAGTCTTTCATCTAATCAATAGTTTTGCAGA
GAAAAAAAAAAAGAGAGATTTACATGGTGGCAATAATAATAATAACAACA
ATATGATGAACAATGAAGCAGAGATGGCAAATGTAATTGAAAGTATTGAT
AGTCAACACCATTTAGTAGATTTATTATACAATCATTTAGTTTATTATAC
TACACAATGTAAACAGATTATATCGAATGGTTACAATACTGATAGAAATG
CAATGAATGTAGATGGTGGTGGGGGGGAGAAGTGATAAACATCCATATAA
ACCACCGCAAGCTTGTGATGATTATACGTTTGCTGATAGAGTCAGTCATA
TGGAACAAATTCAAGATTATTTAAATTTTATTCGTTTCTTATATGACAAG
TCAAGTTTATCCNTTACTAAACAACATATCGATATTTGGTGGAATATCTT
TGTTCTAGAACCAGTATCACANTCTGATAGAACTCACTTTTTCAATTGGG
TCATTGACCATTTAAGTTTGGATGAACATCAAGTTTTGTATTTTATAAAC
AAATTCCAAACNTTAACTTTTACAGATTTAGATATTACCGGTTTCGAATT
TTATAAATTTTGTTTTAATTTAATTAAATNTCATGATTATAATAATAATA
AT----------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gap gap included
Contig length 1480
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 5414348
End point 5415745
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 7
Link to clone list U16102
List of clone(s) 

est1=CFD274Z,1,638
est2=CFG789H,74,1073
est3=CFG789Z,212,840
est4=SLK185F,225,487
est5=CFG789F,314,576
est6=VHE651Z,859,1352
est7=SLK185Z,1353,1480
Translated Amino Acid sequence 
sstrfngfikvf*itislskkcgsq*yn*il*irk***q**fyvkkstifnlcstt*nc*
mvkrkssc*iiiw*nksysiitkmyryikipcrtksi**kvfrldmvsi*rkt*nnrecn
l*yvlerslhyfhlkisiisltrfk*fptiitlk*h*i*yvh*lkdnnkppipmvlhqev
wiyfgi*ckkivmfvmispmhhwfhfkilsnsiqikgdif*lepwti*inivql*fhfv*
sfi*sivlqrkkkreiymvaiiiitti**tmkqrwqm*lkvlivnti**iyytii*fiil
hnvnrlyrmvtiliemq*m*MVVGGRSDKHPYKPPQACDDYTFADRVSHMEQIQDYLNFI
RFLYDKSSLSXTKQHIDIWWNIFVLEPVSXSDRTHFFNWVIDHLSLDEHQVLYFINKFQT
LTFTDLDITGFEFYKFCFNLIKXHDYNNNN---

---KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Translated Amino Acid sequence (All Frames) 
Frame A:
ihqqglmvslkcfkspslfqrnaglndiirfcksesnsnnssfmlrnqqfsiyvaphkiv
ewlkenqvvellygetshiqllqkctdilkflaeqkafdrkyldliwsasegkhetiena
iydtywsdrsitst*ryrlsl*qgsndslqslhsnniefstfinsktttshqfrwyyikr
fgyilefnarrl*cl**slqciigftsrffpilskskgtffn*slgpyr*tsfscsftsf
slssnq*fcrekkkerftwwq****qqydeq*srdgkcn*ky**stpfsrfiiqsfslly
ytm*tdyiewlqy**kcnecrwwwggevinihinhrklvmiirlliesviwnkfkii*il
fvsymtsqvypllnnisifggislf*nqyhxlieltfsigslti*vwmnikfcil*tnsk
x*llqi*ilpvsnfinfvli*lnxmiiiii---

---KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK

Frame B:
finkv*wfh*svlnhhlsfkemrvsmi*ldfvnqkvivtivvlc*einnfqfm*hhikll
ng*kkikllnyymvkqvifnyyknvqiy*nslqnkkhliesi*t*ygqhlkenmkq*rmq
smirigaiapllppedidylfdkvqmipynhytqitlnlvrsltqrqqqatnsdgitsrg
ldifwnlmqedcdvcndlsnaslvslqdsfqfypnqrghfltraldhidkhrsvvvslrl
vfhlinsfaekkkkrdlhggnnnnnnnmmnneaemanviesidsqhhlvdllynhlvyyt
tqckqiisngyntdrnamnvdggggek**tsi*ttasl**lyvc**sqsygtnsrlfkfy
sfli*qvkfixy*ttyrylveylcsrtsitx**nslfqlgh*pfkfg*tssfvfykqipn
xnfyrfryyrfril*ilf*fn*xs*l****---

---KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK

Frame C:
sstrfngfikvf*itislskkcgsq*yn*il*irk***q**fyvkkstifnlcstt*nc*
mvkrkssc*iiiw*nksysiitkmyryikipcrtksi**kvfrldmvsi*rkt*nnrecn
l*yvlerslhyfhlkisiisltrfk*fptiitlk*h*i*yvh*lkdnnkppipmvlhqev
wiyfgi*ckkivmfvmispmhhwfhfkilsnsiqikgdif*lepwti*inivql*fhfv*
sfi*sivlqrkkkreiymvaiiiitti**tmkqrwqm*lkvlivnti**iyytii*fiil
hnvnrlyrmvtiliemq*m*MVVGGRSDKHPYKPPQACDDYTFADRVSHMEQIQDYLNFI
RFLYDKSSLSXTKQHIDIWWNIFVLEPVSXSDRTHFFNWVIDHLSLDEHQVLYFINKFQT
LTFTDLDITGFEFYKFCFNLIKXHDYNNNN---

---KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
own update 2004. 6.23
Homology vs CSM-cDNA 
Query= Contig-U16102-1 (Contig-U16102-1Q)
/CSM_Contig/Contig-U16102-1Q.Seq.d
         (1490 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U16102-1 (Contig-U16102-1Q) /CSM_Contig/Conti...  2444  0.0
Contig-U09254-1 (Contig-U09254-1Q) /CSM_Contig/Conti...    52  3e-06
Contig-U15507-1 (Contig-U15507-1Q) /CSM_Contig/Conti...    46  2e-04
Contig-U12128-1 (Contig-U12128-1Q) /CSM_Contig/Conti...    46  2e-04
Contig-U16394-1 (Contig-U16394-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U16087-1 (Contig-U16087-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U15869-1 (Contig-U15869-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U15789-1 (Contig-U15789-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U15283-1 (Contig-U15283-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U12923-1 (Contig-U12923-1Q) /CSM_Contig/Conti...    44  6e-04

>Contig-U16102-1 (Contig-U16102-1Q) /CSM_Contig/Contig-U16102-1Q.Seq.d
          Length = 1490

 Score = 2444 bits (1233), Expect = 0.0
 Identities = 1278/1296 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    attcatcaacaaggtttaatggtttcattaaagtgttttaaatcaccatctctctttcaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    attcatcaacaaggtttaatggtttcattaaagtgttttaaatcaccatctctctttcaa 60

                                                                        
Query: 61   agaaatgcgggtctcaatgatataattagattttgtaaatcagaaagtaatagtaacaat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   agaaatgcgggtctcaatgatataattagattttgtaaatcagaaagtaatagtaacaat 120

                                                                        
Query: 121  agtagttttatgttaagaaatcaacaattttcaatttatgtagcaccacataaaattgtt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  agtagttttatgttaagaaatcaacaattttcaatttatgtagcaccacataaaattgtt 180

                                                                        
Query: 181  gaatggttaaaagaaaatcaagttgttgaattattatatggtgaaacaagtcatattcaa 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gaatggttaaaagaaaatcaagttgttgaattattatatggtgaaacaagtcatattcaa 240

                                                                        
Query: 241  ttattacaaaaatgtacagatatattaaaattccttgcagaacaaaaagcatttgataga 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ttattacaaaaatgtacagatatattaaaattccttgcagaacaaaaagcatttgataga 300

                                                                        
Query: 301  aagtatttagacttgatatggtcagcatctgaaggaaaacatgaaacaatagagaatgca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  aagtatttagacttgatatggtcagcatctgaaggaaaacatgaaacaatagagaatgca 360

                                                                        
Query: 361  atctatgatacgtattggagcgatcgctccattacttccacctgaagatatcgattatct 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  atctatgatacgtattggagcgatcgctccattacttccacctgaagatatcgattatct 420

                                                                        
Query: 421  ctttgacaaggttcaaatgattccctacaatcattacactcaaataacattgaatttagt 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  ctttgacaaggttcaaatgattccctacaatcattacactcaaataacattgaatttagt 480

                                                                        
Query: 481  acgttcattaactcaaagacaacaacaagccaccaattccgatggtattacatcaagagg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  acgttcattaactcaaagacaacaacaagccaccaattccgatggtattacatcaagagg 540

                                                                        
Query: 541  tttggatatattttggaatttaatgcaagaagattgtgatgtttgtaatgatctctccaa 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  tttggatatattttggaatttaatgcaagaagattgtgatgtttgtaatgatctctccaa 600

                                                                        
Query: 601  tgcatcattggtttcacttcaagattctttccaattctatccaaatcaaaggggacattt 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tgcatcattggtttcacttcaagattctttccaattctatccaaatcaaaggggacattt 660

                                                                        
Query: 661  tttaactagagccttggaccatatagataaacatcgttcagttgtagtttcacttcgttt 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  tttaactagagccttggaccatatagataaacatcgttcagttgtagtttcacttcgttt 720

                                                                        
Query: 721  agtctttcatctaatcaatagttttgcagagnnnnnnnnnnngagagatttacatggtgg 780
            |||||||||||||||||||||||||||||||           ||||||||||||||||||
Sbjct: 721  agtctttcatctaatcaatagttttgcagagaaaaaaaaaaagagagatttacatggtgg 780

                                                                        
Query: 781  caataataataataacaacaatatgatgaacaatgaagcagagatggcaaatgtaattga 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  caataataataataacaacaatatgatgaacaatgaagcagagatggcaaatgtaattga 840

                                                                        
Query: 841  aagtattgatagtcaacaccatttagtagatttattatacaatcatttagtttattatac 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  aagtattgatagtcaacaccatttagtagatttattatacaatcatttagtttattatac 900

                                                                        
Query: 901  tacacaatgtaaacagattatatcgaatggttacaatactgatagaaatgcaatgaatgt 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  tacacaatgtaaacagattatatcgaatggttacaatactgatagaaatgcaatgaatgt 960

                                                                        
Query: 961  agatggtggtnnnnnnnagaagtgataaacatccatataaaccaccgcaagcttgtgatg 1020
            ||||||||||       |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  agatggtggtgggggggagaagtgataaacatccatataaaccaccgcaagcttgtgatg 1020

                                                                        
Query: 1021 attatacgtttgctgatagagtcagtcatatggaacaaattcaagattatttaaatttta 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 attatacgtttgctgatagagtcagtcatatggaacaaattcaagattatttaaatttta 1080

                                                                        
Query: 1081 ttcgtttcttatatgacaagtcaagtttatccnttactaaacaacatatcgatatttggt 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttcgtttcttatatgacaagtcaagtttatccnttactaaacaacatatcgatatttggt 1140

                                                                        
Query: 1141 ggaatatctttgttctagaaccagtatcacantctgatagaactcactttttcaattggg 1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ggaatatctttgttctagaaccagtatcacantctgatagaactcactttttcaattggg 1200

                                                                        
Query: 1201 tcattgaccatttaagtttggatgaacatcaagttttgtattttataaacaaattccaaa 1260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tcattgaccatttaagtttggatgaacatcaagttttgtattttataaacaaattccaaa 1260

                                                
Query: 1261 cnttaacttttacagatttagatattaccggtttcg 1296
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cnttaacttttacagatttagatattaccggtttcg 1296


 Score = 32.2 bits (16), Expect = 2.4
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 376 tggagcgatcgctcca 391
           ||||||||||||||||
Sbjct: 391 tggagcgatcgctcca 376


>Contig-U09254-1 (Contig-U09254-1Q) /CSM_Contig/Contig-U09254-1Q.Seq.d
          Length = 512

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 774 atggtggcaataataataataacaacaata 803
           ||||| ||||||||||||||||||||||||
Sbjct: 211 atggtagcaataataataataacaacaata 240


 Score = 30.2 bits (15), Expect = 9.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 781 caataataataataa 795
           |||||||||||||||
Sbjct: 236 caataataataataa 250


>Contig-U15507-1 (Contig-U15507-1Q) /CSM_Contig/Contig-U15507-1Q.Seq.d
          Length = 3723

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 775  tggtggcaataataataataacaacaata 803
            |||||  ||||||||||||||||||||||
Sbjct: 3468 tggtgnnaataataataataacaacaata 3496


 Score = 34.2 bits (17), Expect = 0.60
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 782  aataataataataacaa 798
            |||||||||||||||||
Sbjct: 2065 aataataataataacaa 2081


 Score = 34.2 bits (17), Expect = 0.60
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 781  caataataataataaca 797
            |||||||||||||||||
Sbjct: 3492 caataataataataaca 3508


 Score = 32.2 bits (16), Expect = 2.4
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                
Query: 782  aataataataataacaacaa 801
            |||||||||||||| |||||
Sbjct: 2062 aataataataataataacaa 2081


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 43,121
Number of Sequences: 8402
Number of extensions: 43121
Number of successful extensions: 14433
Number of sequences better than 10.0: 1064
length of query: 1490
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1474
effective length of database: 7,941,110
effective search space: 11705196140
effective search space used: 11705196140
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 3.13
Homology vs DNA 
Query= Contig-U16102-1 (Contig-U16102-1Q) /CSM_Contig/Contig-U16102-1Q.Seq.d
         (1490 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ374428) Dictyostelium discoideum cDNA clone:ddc7c20, 3' e...   733   0.0    2
(BJ347593) Dictyostelium discoideum cDNA clone:dda27f16, 3' ...   714   0.0    2
(BJ372884) Dictyostelium discoideum cDNA clone:ddc14b23, 3' ...   613   0.0    2
(BJ439462) Dictyostelium discoideum cDNA clone:ddv40e14, 3' ...   607   0.0    2
(AU060503) Dictyostelium discoideum slug cDNA, clone SLK185.      289   e-136  2
(BJ359448) Dictyostelium discoideum cDNA clone:ddc14b23, 5' ...   406   e-130  2
(CR932377) Zebrafish DNA sequence from clone DKEY-238H15 in ...    40   0.003  4
(AC168579) Strongylocentrotus purpuratus clone R3-3065H15, W...    42   0.003  9
(AC179261) Strongylocentrotus purpuratus clone R3-42O22, WOR...    40   0.023  6
(FP016050) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   0.033  5
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    44   0.039  7
(AC176490) Strongylocentrotus purpuratus clone R3-3071B01, W...    44   0.042  2
(GF053383) pRRL2:Newb:20080411:57940 USMARC Pig Breed SNP Di...    52   0.061  1
(AC116032) Dictyostelium discoideum chromosome 2 map 4158743...    52   0.061  1
(CU915365) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    52   0.061  1
(CU457477) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    52   0.061  1
(AU060333) Dictyostelium discoideum slug cDNA, clone SLJ269.       52   0.061  1
(AM475967) Vitis vinifera contig VV78X079027.2, whole genome...    42   0.063  2
(AC058333) Homo sapiens 3 BAC RP11-62L21 (Roswell Park Cance...    44   0.11   2
(EL502489) C07_PFLAB1-M-PLATE2B.AB1 Blood stage Plasmodium f...    44   0.20   3
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2...    46   0.22   5
(BJ428513) Dictyostelium discoideum cDNA clone:ddv12b11, 3' ...    40   0.23   2
(AL935126) Zebrafish DNA sequence from clone CH211-186J3.          50   0.24   1
(AC212301) Solanum lycopersicum cv. Heinz 1706, chromosome 5...    50   0.24   1
(AC194694) Solanum lycopersicum cv. Heinz 1706, chromosome 5...    50   0.24   1
(EA211503) Sequence 75818 from patent US 7214786.                  50   0.24   1
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s...    50   0.24   1
(AC159451) Trypanosoma brucei chromosome 8 clone RPCI93-5H5,...    50   0.24   1
(AP002427) Homo sapiens genomic DNA, chromosome 11 clone:RP1...    50   0.24   1
(AP001274) Homo sapiens genomic DNA, chromosome 11 clone:RP1...    50   0.24   1
(AC186111) Atelerix albiventris clone LB4-518J7, WORKING DRA...    50   0.24   1
(AQ949762) Sheared DNA-46B1.TR Sheared DNA Trypanosoma bruce...    50   0.24   1
(FH489449) CHO_OF4207xb01f1.ab1 CHO_OF4 Nicotiana tabacum ge...    50   0.24   1
(ET978800) CHO_OF734xa22f1.ab1 CHO_OF Nicotiana tabacum geno...    50   0.24   1
(EL742586) LV0244017 Taenia solium UNAM-cd2_larva Taenia sol...    50   0.24   1
(DV741209) ID0AFF3CF05CM1 ID0AFF Acyrthosiphon pisum cDNA cl...    50   0.24   1
(BQ743777) WHE4108_A08_B16ZS Wheat salt-stressed root cDNA l...    50   0.24   1
(BM276195) PfESToaa71e12.y1 Plasmodium falciparum 3D7 gameto...    50   0.24   1
(EY267927) BF01044A2C05.f1 Normalized subtracted keck librar...    50   0.24   1
(AC181287) Strongylocentrotus purpuratus clone R3-4017A14, W...    40   0.29   5
(FH677506) CHO_OF5052xf03r1.ab1 CHO_OF5 Nicotiana tabacum ge...    44   0.34   2
(AF081801) Dictyostelium discoideum developmental protein DG...    42   0.36   2
(ER446771) 1092963834007 Global-Ocean-Sampling_GS-35-01-01-1...    40   0.36   2
(ER445993) 1092963829207 Global-Ocean-Sampling_GS-35-01-01-1...    40   0.36   2
(EK503642) 1095506051441 Global-Ocean-Sampling_GS-32-01-01-1...    42   0.37   2
(BX248387) Zebrafish DNA sequence from clone CH211-231O6 in ...    44   0.40   2
(CR394534) Zebrafish DNA sequence from clone CH211-276A17 in...    44   0.42   5
(AU033955) Dictyostelium discoideum slug cDNA, clone SLB655.       44   0.48   2
(AF362369) Dictyostelium discoideum histidine kinase DhkG (d...    36   0.54   5
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    44   0.57   4
(U42597) Dictyostelium discoideum histidine kinase A (dhkA) ...    46   0.61   2
(GF054192) pRRL2:Newb:20080411:58963 USMARC Pig Breed SNP Di...    44   0.68   2
(BX511307) Zebrafish DNA sequence from clone RP71-1A16 in li...    40   0.76   6
(AL844509) Plasmodium falciparum chromosome 13.                    46   0.88   7
(CR383672) Zebrafish DNA sequence from clone DKEY-11P10 in l...    42   0.89   9
(G38828) TA3 Plasmodium falciparum haploid Plasmodium falcip...    36   0.90   2
(EL496669) G10_PFBAMHI-M-T7-PLATE10A.AB1 Blood stage Plasmod...    38   0.91   2
(AU040023) Dictyostelium discoideum slug cDNA, clone SLH468.       44   0.94   2
(CU464084) Zebrafish DNA sequence from clone CH73-360N3 in l...    48   0.96   1
(BX571853) Zebrafish DNA sequence from clone DKEY-29H14 in l...    48   0.96   1
(BX323874) Zebrafish DNA sequence from clone DKEY-104N21 in ...    48   0.96   1
(AL845324) Zebrafish DNA sequence from clone CH211-122L14 in...    48   0.96   1
(BV470569) G591P624056FA8.T0 Clint Pan troglodytes verus STS...    48   0.96   1
(CT010437) Mouse DNA sequence from clone RP23-333O22 on chro...    48   0.96   1
(AC102769) Mus musculus chromosome 17, clone RP23-89A3, comp...    48   0.96   1
(AP010874) Lotus japonicus genomic DNA, clone: LjB14J02, BM2...    48   0.96   1
(AM487638) Vitis vinifera contig VV78X076574.4, whole genome...    48   0.96   1
(AM481529) Vitis vinifera, whole genome shotgun sequence, co...    48   0.96   1
(AM472274) Vitis vinifera contig VV78X101776.9, whole genome...    48   0.96   1
(AC174607) Solanum lycopersicum, complete sequence.                48   0.96   1
(AL607026) Human DNA sequence from clone RP11-498G22 on chro...    48   0.96   1
(AL121870) Human DNA sequence from clone RP13-166C10 on chro...    48   0.96   1
(AC024072) Homo sapiens chromosome 10 clone RP11-267O2, comp...    48   0.96   1
(AC012670) Homo sapiens BAC clone RP11-514A9 from 2, complet...    48   0.96   1
(AC136936) Homo sapiens chromosome 16 clone RP11-1147P24, WO...    48   0.96   1
(AC131434) Rattus norvegicus clone CH230-8B13, *** SEQUENCIN...    48   0.96   1
(AC118914) Rattus norvegicus clone CH230-65A13, WORKING DRAF...    48   0.96   1
(AC114081) Rattus norvegicus clone CH230-70H3, *** SEQUENCIN...    48   0.96   1
(AC112313) Rattus norvegicus clone CH230-116M5, *** SEQUENCI...    48   0.96   1
(FP089698) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.96   1
(CU915582) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.96   1
(CU302239) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.96   1
(CT997807) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.96   1
(AL845425) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    48   0.96   1
(BH084649) RPCI-24-322A17.TV RPCI-24 Mus musculus genomic cl...    48   0.96   1
(FI004217) CHO_OF6895xp09f1.ab1 CHO_OF6 Nicotiana tabacum ge...    48   0.96   1
(FH904197) CHO_ONF025xn24f1.ab1 CHO_ONF Nicotiana tabacum ge...    48   0.96   1
(FH899116) CHO_ONF064xe05f1.ab1 CHO_ONF Nicotiana tabacum ge...    48   0.96   1
(FH898761) CHO_ONF059xp16f1.ab1 CHO_ONF Nicotiana tabacum ge...    48   0.96   1
(FH756426) OSB_1160004xg05r1.ab1 OSB_1160 Nicotiana tabacum ...    48   0.96   1
(FH755899) OSB_1160003xc10r1.ab1 OSB_1160 Nicotiana tabacum ...    48   0.96   1
(FH755770) OSB_1160003xg13r1.ab1 OSB_1160 Nicotiana tabacum ...    48   0.96   1
(FH755658) OSB_1160003xa03f1.ab1 OSB_1160 Nicotiana tabacum ...    48   0.96   1
(FH755362) OSB_1160002xj17f1.ab1 OSB_1160 Nicotiana tabacum ...    48   0.96   1
(FH755005) OSB_1160002xe23f1.ab1 OSB_1160 Nicotiana tabacum ...    48   0.96   1
(FH754999) OSB_1160002xe07f1.ab1 OSB_1160 Nicotiana tabacum ...    48   0.96   1
(FH754775) OSB_1160001xe18r1.ab1 OSB_1160 Nicotiana tabacum ...    48   0.96   1
(FH754706) OSB_1160001xg03r1.ab1 OSB_1160 Nicotiana tabacum ...    48   0.96   1
(FH729600) CHO_OF5099xj17r1.ab1 CHO_OF5 Nicotiana tabacum ge...    48   0.96   1
(FH674107) CHO_OF5043xm09f1.ab1 CHO_OF5 Nicotiana tabacum ge...    48   0.96   1
(FH572989) CHO_OF4886xm23r1.ab1 CHO_OF4 Nicotiana tabacum ge...    48   0.96   1
(FH551563) CHO_OF4363xm06r1.ab1 CHO_OF4 Nicotiana tabacum ge...    48   0.96   1
(FH416654) CHO_OF4879xk17r1.ab1 CHO_OF4 Nicotiana tabacum ge...    48   0.96   1
(FH291667) CHO_OF4213xi18f1.ab1 CHO_OF4 Nicotiana tabacum ge...    48   0.96   1
(FH134552) CHO_OF3622xg19f1.ab1 CHO_OF3 Nicotiana tabacum ge...    48   0.96   1
(FH063485) CHO_OF3000xi14r1.ab1 CHO_OF3 Nicotiana tabacum ge...    48   0.96   1
(ET883748) CHO_OF427xe13r1.ab1 CHO_OF Nicotiana tabacum geno...    48   0.96   1
(ET727033) CHO_OF143xo18r1.ab1 CHO_OF Nicotiana tabacum geno...    48   0.96   1
(ET710608) CHO_OF045xb24f1.ab1 CHO_OF Nicotiana tabacum geno...    48   0.96   1
(DX461014) Cpl02698 Papaya Genomic DNA BAC Library Carica pa...    48   0.96   1
(DX425693) BE1037_K24_F IASMA L1 HindIII BAC library Vitis v...    48   0.96   1
(DX389783) AGAA-aaa37e05.b1 AGAA Anolis smaragdinus genomic,...    48   0.96   1
(DX328640) OR_ABa0250C23.f OR_ABa Oryza ridleyi genomic clon...    48   0.96   1
(DU893680) 395770 Tomato HindIII BAC Library Solanum lycoper...    48   0.96   1
(AL186772) Tetraodon nigroviridis genome survey sequence PUC...    48   0.96   1
(CU753767) A BAC library has been constructed from PN40024 g...    48   0.96   1
(CT246007) Sus scrofa genomic clone CH242-151E9, genomic sur...    48   0.96   1
(EH756123) CNSL15161.b1_B23.ab1 CNS(LMS) yellow starthistle ...    48   0.96   1
(AU266722) Dictyostelium discoideum vegetative cDNA clone:VS...    48   0.96   1
(DC231640) Plasmodium berghei strain ANKA cDNA clone:SG02252...    48   0.96   1
(DB908362) Populus nigra mRNA, clone: PnFL2-089_K21, 3'end.        48   0.96   1
(CV176090) SPHODROMANTIS35PCR_C07_1_050 Sphodromantis centra...    48   0.96   1
(CV176075) SPHODROMANTIS35PCR_A06_1_037 Sphodromantis centra...    48   0.96   1
(CV176042) SPHODROMANTIS25PCR_C09_1_066 Sphodromantis centra...    48   0.96   1
(CV175978) SPHODROMANTIS15PCR_B06_1_045 Sphodromantis centra...    48   0.96   1
(BX564760) Glossina morsitans morsitans (Tseatse fly) EST fr...    48   0.96   1
(C93122) Dictyostelium discoideum slug cDNA, clone SSM579.         44   0.96   2
(EC822774) SME00005823 esmbsro2 Sawyeria marylandensis cDNA,...    44   0.99   2
(FG727228) G1145P36FP4.T0 Anolis carolinensis pooled normali...    42   1.0    2
(FH360102) CHO_OF4688xj23f1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   1.1    2
(FE151282) LV_LO_RA009M23f Litopenaeus vannamei lymphoid org...    44   1.1    2
(AL726905) Danio rerio embryonic inner ear subtracted cDNA l...    42   1.2    2
(FG727180) G1145P36RP4.T0 Anolis carolinensis pooled normali...    42   1.2    2
(EL502376) C01_PFLAB1-LARGE-PLATE15B.AB1 Blood stage Plasmod...    46   1.3    2
(EY309580) CAWX21673.fwd CAWX Helobdella robusta Primary Ear...    46   1.3    2
(BX004790) Zebrafish DNA sequence from clone CH211-215J7 in ...    38   1.4    6
(AC178438) Strongylocentrotus purpuratus clone R3-3041K14, W...    42   1.4    5
(AM433625) Vitis vinifera contig VV78X134482.6, whole genome...    44   1.4    3
(CR376737) Zebrafish DNA sequence from clone CH211-14G13 in ...    44   1.5    5
(CU861671) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   1.7    5
(AU054158) Dictyostelium discoideum slug cDNA, clone SLK835.       42   1.7    2
(AF010537) Plasmodium falciparum microsatellite TA3 sequence.      36   1.7    2
(AC009898) Homo sapiens chromosome 8, clone RP11-138H14, com...    44   1.8    5
(BX323454) Zebrafish DNA sequence from clone CH211-263F9 in ...    40   1.8    6
(AC192106) Gallus gallus chromosome 1 clone CH261-56C11, ***...    36   1.9    2
(AL844507) Plasmodium falciparum chromosome 8.                     46   2.1    6
(EJ284184) 1095368008202 Global-Ocean-Sampling_GS-27-01-01-1...    38   2.1    3
(ET898754) CHO_OF145xg03f1.ab1 CHO_OF Nicotiana tabacum geno...    40   2.3    2
(AC126861) Rattus norvegicus clone CH230-37M19, WORKING DRAF...    42   2.5    5
(AW738663) EST340090 tomato flower buds, anthesis, Cornell U...    44   2.5    2
(CC262826) CH261-19J18_RM1.1 CH261 Gallus gallus genomic clo...    36   2.5    2
(BJ355571) Dictyostelium discoideum cDNA clone:dda57d16, 3' ...    44   2.5    2
(CC265750) CH261-88I17_RM1.1 CH261 Gallus gallus genomic clo...    36   2.5    2
(AC127618) Rattus norvegicus clone CH230-390H10, *** SEQUENC...    46   2.6    2
(EV426407) 210759936 NVP Nasonia vitripennis cDNA clone 200O...    34   2.6    2
(AL935174) Zebrafish DNA sequence from clone CH211-195B21 in...    40   2.7    9
(AC111926) Rattus norvegicus clone CH230-103H18, *** SEQUENC...    44   2.7    3
(BH187881) 034_J_04-21 SmBAC1 Schistosoma mansoni genomic cl...    44   2.7    2
(AL624825) T7 end of clone 034DE02 of library SmBAC1 from st...    44   2.7    2
(AC213417) Populus trichocarpa clone POP018-J23, complete se...    36   2.8    5
(AC190648) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB...    34   2.8    8
(AC112391) Rattus norvegicus clone CH230-173P3, *** SEQUENCI...    40   2.9    3
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-...    44   2.9    6
(CU694363) Zebrafish DNA sequence from clone ZFOS-659F11.          44   2.9    2
(AC171128) Helobdella robusta clone CH306-1A10, complete seq...    40   3.0    7
(AC116955) Dictyostelium discoideum chromosome 2 map 5455881...    36   3.0    6
(BJ408668) Dictyostelium discoideum cDNA clone:dds46g14, 3' ...    44   3.0    2
(CV162186) CS_hyp_01d11_M13Reverse Blue crab hypodermis, nor...    42   3.2    2
(BX629349) Zebrafish DNA sequence from clone CH211-53P9 in l...    36   3.3    5
(BM275140) PfESToaa80e10.y1 Plasmodium falciparum 3D7 gameto...    36   3.3    2
(CT763502) Paramecium tetraurelia 5-PRIME EST from clone LK0...    36   3.4    2
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214...    44   3.4    3
(ED999444) MUGQ_CH252P167P21T7_CN208_081 CHORI-252 Vervet Mo...    38   3.4    3
(CU693446) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   3.4    3
(AY232271) Dictyostelium discoideum putative protein Roco9 (...    44   3.5    2
(CV463052) CS_hyp_52b08_M13Reverse Blue crab hypodermis, nor...    42   3.6    2
(AM474408) Vitis vinifera contig VV78X173370.5, whole genome...    44   3.6    2
(EB231139) PEG003-C-201070-501 Normalized Pedal-Pleural Gang...    44   3.6    2
(AW737094) EST338521 tomato flower buds, anthesis, Cornell U...    44   3.7    2
(CU695206) Zebrafish DNA sequence from clone DKEY-285M9 in l...    46   3.8    1
(CU571159) Zebrafish DNA sequence from clone CH73-137H6 in l...    46   3.8    1
(CU469496) Zebrafish DNA sequence from clone CH73-113C9 in l...    46   3.8    1
(CU468051) Zebrafish DNA sequence from clone DKEY-234G11 in ...    46   3.8    1
(CU466239) Zebrafish DNA sequence from clone CH1073-451F13 i...    46   3.8    1
(CU464181) Zebrafish DNA sequence from clone CH73-108M21 in ...    46   3.8    1
(CU462915) Zebrafish DNA sequence from clone DKEY-58O21 in l...    46   3.8    1
(CU459012) Zebrafish DNA sequence from clone CH211-182A13 in...    46   3.8    1
(CU207419) Zebrafish DNA sequence from clone DKEY-250E23 in ...    46   3.8    1
(CU207218) Zebrafish DNA sequence from clone CH211-77N17.          46   3.8    1
(CU074421) Zebrafish DNA sequence from clone DKEY-172O7 in l...    46   3.8    1
(CT573157) Zebrafish DNA sequence from clone CH73-1M18 in li...    46   3.8    1
(CT030034) Zebrafish DNA sequence from clone CH73-366C23 in ...    46   3.8    1
(CT025745) Zebrafish DNA sequence from clone DKEY-250N8 in l...    46   3.8    1
(CR933843) Zebrafish DNA sequence from clone DKEY-105E17 in ...    46   3.8    1
(CR848039) Zebrafish DNA sequence from clone CH211-232H12 in...    46   3.8    1
(CR812847) Zebrafish DNA sequence from clone DKEY-9I15 in li...    46   3.8    1
(CR762429) Zebrafish DNA sequence from clone CH211-172J10.         46   3.8    1
(CR405703) Zebrafish DNA sequence from clone DKEYP-52E4 in l...    46   3.8    1
(CR391999) Zebrafish DNA sequence from clone CH211-261L7 in ...    46   3.8    1
(CR388392) Zebrafish DNA sequence from clone DKEY-204F1 in l...    46   3.8    1
(CR388087) Zebrafish DNA sequence from clone DKEY-19N7 in li...    46   3.8    1
(CR387978) Zebrafish DNA sequence from clone DKEY-33M5 in li...    46   3.8    1
(CR385083) Zebrafish DNA sequence from clone CH211-142E17 in...    46   3.8    1
(CR381654) Zebrafish DNA sequence from clone DKEY-30K9 in li...    46   3.8    1
(CR376741) Zebrafish DNA sequence from clone DKEY-114B16 in ...    46   3.8    1
(CR354539) Zebrafish DNA sequence from clone CH211-250O1 in ...    46   3.8    1
(CR354430) Zebrafish DNA sequence from clone CH211-218P2 in ...    46   3.8    1
(CR354379) Zebrafish DNA sequence from clone DKEY-1M14 in li...    46   3.8    1
(BX957314) Zebrafish DNA sequence from clone CH211-114K5 in ...    46   3.8    1
(BX927356) Zebrafish DNA sequence from clone DKEY-54K20 in l...    46   3.8    1
(BX914203) Zebrafish DNA sequence from clone CH211-22E19 in ...    46   3.8    1
(BX901942) Zebrafish DNA sequence from clone DKEY-121B10 in ...    46   3.8    1
(BX649588) Zebrafish DNA sequence from clone CH211-97M8 in l...    46   3.8    1
(BX649535) Zebrafish DNA sequence from clone DKEY-234E12 in ...    46   3.8    1
(BX640500) Zebrafish DNA sequence from clone RP71-86I11 in l...    46   3.8    1
(BX640497) Zebrafish DNA sequence from clone CH211-108O9 in ...    46   3.8    1
(BX548160) Zebrafish DNA sequence from clone DKEY-25G11 in l...    46   3.8    1
(BX530089) Zebrafish DNA sequence from clone CH211-129M12 in...    46   3.8    1
(BX511254) Zebrafish DNA sequence from clone DKEYP-90G2 in l...    46   3.8    1
(BX511065) Zebrafish DNA sequence from clone DKEY-32I16 in l...    46   3.8    1
(BX510918) Zebrafish DNA sequence from clone CH211-249O9 in ...    46   3.8    1
(BX510360) Zebrafish DNA sequence from clone DKEY-265A7 in l...    46   3.8    1
(BX470266) Zebrafish DNA sequence from clone DKEYP-9D4 in li...    46   3.8    1
(BX470184) Zebrafish DNA sequence from clone CH211-214H13 in...    46   3.8    1
(BX470138) Zebrafish DNA sequence from clone DKEY-245N4 in l...    46   3.8    1
(BX323864) Zebrafish DNA sequence from clone CH211-218K4 in ...    46   3.8    1
(BX323862) Zebrafish DNA sequence from clone DKEYP-97A5 in l...    46   3.8    1
(BX323597) Zebrafish DNA sequence from clone CH211-227N13 in...    46   3.8    1
(BX321905) Zebrafish DNA sequence from clone DKEYP-13F6 in l...    46   3.8    1
(BX294117) Zebrafish DNA sequence from clone CH211-270F13 in...    46   3.8    1
(BX005415) Zebrafish DNA sequence from clone DKEY-21I5 in li...    46   3.8    1
(BX005332) Zebrafish DNA sequence from clone CH211-103F14 in...    46   3.8    1
(BC096782) Danio rerio zgc:109892, mRNA (cDNA clone MGC:1098...    46   3.8    1
(AY618933) Takifugu rubripes RhAG-like protein mRNA, complet...    46   3.8    1
(AL935272) Zebrafish DNA sequence from clone CH211-266K22 in...    46   3.8    1
(AL935141) Zebrafish DNA sequence from clone CH211-173A9 in ...    46   3.8    1
(AL929346) Zebrafish DNA sequence from clone DKEY-38P12.           46   3.8    1
(AL929155) Zebrafish DNA sequence from clone DKEY-265M8 in l...    46   3.8    1
(AL732511) Zebrafish DNA sequence from clone CH211-140G4 in ...    46   3.8    1
(AL591170) Zebrafish DNA sequence from clone BUSM1-221D18 in...    46   3.8    1
(G08097) human STS CHLC.ATA14A02.P15940 clone ATA14A02, sequ...    46   3.8    1
(BV791358) pRRL2:Newb:20080411:163800 USMARC Pig Breed SNP D...    46   3.8    1
(BV631576) S215P61384RC7.T0 Clara Pan troglodytes troglodyte...    46   3.8    1
(BV211675) BARC360 Wheat var Chinese Spring Genomic DNA Trit...    46   3.8    1
(BV029974) S212P60398FA11.T0 CZECHII/Ei Mus musculus STS gen...    46   3.8    1
(CU467494) Mouse DNA sequence from clone RP24-118O5 on chrom...    46   3.8    1
(CU463841) Mouse DNA sequence from clone RP24-372N23 on chro...    46   3.8    1
(CT010474) Mouse DNA sequence from clone RP23-199B14 on chro...    46   3.8    1
(CR974473) Mouse DNA sequence from clone RP23-38P5 on chromo...    46   3.8    1
(CR974466) Mouse DNA sequence from clone RP23-331E12 on chro...    46   3.8    1
(AL844495) Mouse DNA sequence from clone RP23-252L9 on chrom...    46   3.8    1
(AL646048) Mouse DNA sequence from clone RP23-289C5 on chrom...    46   3.8    1
(AF111103) Mouse major histocompatibility complex region con...    46   3.8    1
(AF111102) Mus musculus strain 129/SvJ chromosome 17 clone B...    46   3.8    1
(AC165165) Mus musculus BAC clone RP23-121B15 from chromosom...    46   3.8    1
(AC154695) Mus musculus BAC clone RP24-341I23 from 13, compl...    46   3.8    1
(AC142270) Mus musculus BAC clone RP24-115G23 from chromosom...    46   3.8    1
(AC137583) Mus musculus chromosome 13, clone RP23-140F24, co...    46   3.8    1
(AC135669) Mus musculus BAC clone RP23-360L22 from chromosom...    46   3.8    1
(AC129331) Mus musculus BAC clone RP23-75C8 from chromosome ...    46   3.8    1
(AC125643) Rattus norvegicus 4 BAC CH230-55N7 (Children's Ho...    46   3.8    1
(AC124454) Mus musculus BAC clone RP24-228I9 from chromosome...    46   3.8    1
(AC124433) Mus musculus BAC clone RP24-248P14 from chromosom...    46   3.8    1
(AC121831) Mus musculus BAC clone RP24-66F17 from chromosome...    46   3.8    1
(AC115305) Mus musculus BAC clone RP24-372L1 from 18, comple...    46   3.8    1
(AC109805) Mus musculus chromosome 3, clone RP23-91D14, comp...    46   3.8    1
(AC104917) Mus musculus chromosome 1, clone RP23-329F7, comp...    46   3.8    1
(AC101221) Mus musculus chromosome 13, clone RP23-96E4, comp...    46   3.8    1
(AC100893) Mus musculus chromosome 8, clone RP23-68I8, compl...    46   3.8    1
(AC087216) Mus musculus strain 129svj chromosome 17 clone GS...    46   3.8    1
(AC074335) Mus Musculus Strain C57BL6/J Chromosome 18 BAC, R...    46   3.8    1
(CU915759) S.lycopersicum DNA sequence from clone SL_MboI-12...    46   3.8    1
(AP009604) Solanum lycopersicum DNA, chromosome 8, clone: C0...    46   3.8    1
(AP008209) Oryza sativa (japonica cultivar-group) genomic DN...    46   3.8    1
(AM465637) Vitis vinifera contig VV78X090788.3, whole genome...    46   3.8    1
(AM458581) Vitis vinifera contig VV78X141303.10, whole genom...    46   3.8    1
(AM451833) Vitis vinifera contig VV78X274839.5, whole genome...    46   3.8    1
(AM432972) Vitis vinifera, whole genome shotgun sequence, co...    46   3.8    1
(AC149801) Medicago truncatula chromosome 2 clone mth2-32i15...    46   3.8    1
(AC137597) Genomic sequence for Oryza sativa, Nipponbare str...    46   3.8    1
(AC123573) Medicago truncatula clone mth2-5n3, complete sequ...    46   3.8    1
(CS351401) Sequence 785 from Patent WO2006013561.                  46   3.8    1
(CS255333) Sequence 27 from Patent EP1621630.                      46   3.8    1
(CQ861560) Sequence 193 from Patent WO2004072265.                  46   3.8    1
(CQ588327) Sequence 16085 from Patent WO0171042.                   46   3.8    1
(CQ588326) Sequence 16084 from Patent WO0171042.                   46   3.8    1
(CR956377) Pig DNA sequence from clone PigE-220E19 on chromo...    46   3.8    1
(AP009124) Sus scrofa genomic DNA, chromosome 1q, microsatel...    46   3.8    1
(AC190392) Canis Familiaris chromosome 29, clone XX-183G5, c...    46   3.8    1
(CR382401) Plasmodium falciparum chromosome 6, complete sequ...    46   3.8    1
(CR382398) Plasmodium falciparum chromosome 6, complete sequ...    46   3.8    1
(AY152858) Dictyostelium discoideum diacylglycerol kinase pr...    46   3.8    1
(AY058285) Drosophila melanogaster GH03607 full length cDNA.       46   3.8    1
(AL035477) Plasmodium falciparum MAL4P4.                           46   3.8    1
(AL034560) Plasmodium falciparum MAL3P8.                           46   3.8    1
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ...    46   3.8    1
(AE014848) Plasmodium falciparum 3D7 chromosome 12, section ...    46   3.8    1
(AE014844) Plasmodium falciparum 3D7 chromosome 12, section ...    46   3.8    1
(AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4...    46   3.8    1
(AE014819) Plasmodium falciparum 3D7 chromosome 14 section 4...    46   3.8    1
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2...    46   3.8    1
(AE014816) Plasmodium falciparum 3D7 chromosome 14 section 1...    46   3.8    1
(AE014297) Drosophila melanogaster chromosome 3R, complete s...    46   3.8    1
(AE001418) Plasmodium falciparum 3D7 chromosome 2 section 55...    46   3.8    1
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    46   3.8    1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    46   3.8    1
(AC084161) Caenorhabditis elegans cosmid Y92H12A, complete s...    46   3.8    1
(AC009462) Drosophila melanogaster clone BACR27G04, complete...    46   3.8    1
(AL445213) Human DNA sequence from clone RP13-52K8 on chromo...    46   3.8    1
(AL031282) Human DNA sequence from clone RP1-283E3 on chromo...    46   3.8    1
(AC104791) Homo sapiens BAC clone RP11-181K12 from 4, comple...    46   3.8    1
(AC096762) Homo sapiens BAC clone RP11-621I20 from 4, comple...    46   3.8    1
(AC091959) Homo sapiens chromosome 5 clone RP11-449H3, compl...    46   3.8    1
(AC005181) Homo sapiens chromosome 17, clone hRPK.1003_J_3, ...    46   3.8    1
(AC161770) Bos taurus clone CH240-110M21, WORKING DRAFT SEQU...    46   3.8    1
(AC160328) Bos taurus clone CH240-43B14, WORKING DRAFT SEQUE...    46   3.8    1
(AC153744) Ornithorhynchus anatinus clone OA_Bb-401P11, WORK...    46   3.8    1
(AC152360) Atelerix albiventris clone LB4-173O15, WORKING DR...    46   3.8    1
(AC147399) Canis lupus familiaris clone RP81-206L11, WORKING...    46   3.8    1
(AC141748) Apis mellifera clone CH224-59E22, WORKING DRAFT S...    46   3.8    1
(AC139953) Rattus norvegicus clone CH230-113D13, WORKING DRA...    46   3.8    1
(AC139413) Rattus norvegicus clone CH230-57G3, WORKING DRAFT...    46   3.8    1
(AC132895) Mus musculus chromosome 13 clone RP24-370M16 map ...    46   3.8    1
(AC130557) Rattus norvegicus clone CH230-169O23, *** SEQUENC...    46   3.8    1
(AC128915) Rattus norvegicus clone CH230-332D13, *** SEQUENC...    46   3.8    1
(AC126233) Pan troglodytes clone RP43-143D11, WORKING DRAFT ...    46   3.8    1
(AC105079) Mus musculus clone RP24-219L2, WORKING DRAFT SEQU...    46   3.8    1
(AC097735) Rattus norvegicus clone CH230-6J4, *** SEQUENCING...    46   3.8    1
(AC096809) Rattus norvegicus clone CH230-48B4, WORKING DRAFT...    46   3.8    1
(AC096053) Rattus norvegicus clone CH230-22H12, WORKING DRAF...    46   3.8    1
(AC094606) Rattus norvegicus clone CH230-4P12, WORKING DRAFT...    46   3.8    1
(FP016176) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(CU929165) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(CU929154) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(CU928794) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.8    1
(CU896567) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(CU862078) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(AC094350) Rattus norvegicus clone CH230-3K9, *** SEQUENCING...    46   3.8    1
(AC087043) Homo sapiens chromosome 4 clone CTD-2655P21 map 4...    46   3.8    1
(AC073025) Homo sapiens chromosome 4 clone RP11-265B3 map 4,...    46   3.8    1
(AC027526) Homo sapiens chromosome 5 clone RP11-348G19 map 5...    46   3.8    1
(CU571059) Mouse DNA sequence *** SEQUENCING CANCELLED *** f...    46   3.8    1
(CU570921) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.8    1
(CU570864) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.8    1
(CU468602) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.8    1
(CU468416) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.8    1
(CU467501) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.8    1
(CU463148) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.8    1
(CU462978) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(CU407222) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.8    1
(CU234170) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(CT963089) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.8    1
(CT868730) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***...    46   3.8    1
(CR940368) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(CR933788) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(CR931727) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(CR847544) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    46   3.8    1
(CR846098) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    46   3.8    1
(CR354393) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(CR318615) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(BX899179) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(BX511299) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(AL844506) Plasmodium falciparum chromosome  7.                    46   3.8    1
(AL732580) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.8    1
(AL355675) Human DNA sequence *** SEQUENCING CANCELLED *** f...    46   3.8    1
(AL049184) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    46   3.8    1
(AC231719) Choloepus hoffmanni clone CH281-88O24, WORKING DR...    46   3.8    1
(AC219057) Zea mays chromosome 5 clone CH201-20C20; ZMMBBc00...    46   3.8    1
(AC216404) Solanum lycopersicum chromosome 9 clone C09SLm010...    46   3.8    1
(AC207115) Zea mays chromosome 5 clone CH201-373I12; ZMMBBc0...    46   3.8    1
(AC201267) Strongylocentrotus purpuratus clone R3-16A11, WOR...    46   3.8    1
(AC195323) Zea mays chromosome 2 clone ZMMBBb-25C19; ZMMBBb0...    46   3.8    1
(AC192034) Atelerix albiventris clone LB4-371F18, WORKING DR...    46   3.8    1
(AC189924) Sorex araneus clone SA_Ba-535A19, WORKING DRAFT S...    46   3.8    1
(AC186457) Atelerix albiventris clone LB4-262M15, WORKING DR...    46   3.8    1
(AC185088) Bos taurus clone CH240-182I3, WORKING DRAFT SEQUE...    46   3.8    1
(AC184208) Strongylocentrotus purpuratus clone R3-31F18, WOR...    46   3.8    1
(AC178015) Strongylocentrotus purpuratus clone R3-3055B12, W...    46   3.8    1
(AC176484) Strongylocentrotus purpuratus clone R3-114M07, WO...    46   3.8    1
(AC176389) Strongylocentrotus purpuratus clone R3-3047C11, W...    46   3.8    1
(AC172794) Atelerix albiventris clone LB4-198L8, WORKING DRA...    46   3.8    1
(AC172107) Macaca mulatta clone CH250-37A16, WORKING DRAFT S...    46   3.8    1
(AC171751) Atelerix albiventris clone LB4-159A3, WORKING DRA...    46   3.8    1
(AC171750) Atelerix albiventris clone LB4-150L24, WORKING DR...    46   3.8    1
(AC171052) Bos taurus clone CH240-241H13, WORKING DRAFT SEQU...    46   3.8    1
(AC164380) Bos taurus clone CH240-150M10, *** SEQUENCING IN ...    46   3.8    1
(AC163860) Bos taurus clone CH240-144I18, *** SEQUENCING IN ...    46   3.8    1
(AC014470) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    46   3.8    1
(AC010923) Drosophila melanogaster strain y chromosome X clo...    46   3.8    1
(AC006910) Caenorhabditis elegans clone Y92H12, *** SEQUENCI...    46   3.8    1
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8...    46   3.8    1
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8...    46   3.8    1
(AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29...    46   3.8    1
(AC004153) Plasmodium falciparum chromosome 12 clone PFYAC81...    46   3.8    1
(AY068405) Schmidtea mediterranea clone H.37.4h unknown mRNA...    46   3.8    1
(BH180160) 016_G_20-rev SmBAC1 Schistosoma mansoni genomic c...    46   3.8    1
(AZ393071) 1M0156A06F Mouse 10kb plasmid UUGC1M library Mus ...    46   3.8    1
(AZ012516) RPCI-23-365M10.TV RPCI-23 Mus musculus genomic cl...    46   3.8    1
(FI267775) CccaBb042-P5JR CccABb Cajanus cajan genomic clone...    46   3.8    1
(FI200050) CccaBa023-P7TV CccABa Cajanus cajan genomic clone...    46   3.8    1
(FH882042) OSB_543003xn08r1.ab1 OSB_543 Nicotiana tabacum ge...    46   3.8    1
(FH881936) OSB_543003xh16f1.ab1 OSB_543 Nicotiana tabacum ge...    46   3.8    1
(FH881807) OSB_543003xn07f1.ab1 OSB_543 Nicotiana tabacum ge...    46   3.8    1
(FH881631) OSB_543003xg18f1.ab1 OSB_543 Nicotiana tabacum ge...    46   3.8    1
(FH881470) OSB_543003xe23f1.ab1 OSB_543 Nicotiana tabacum ge...    46   3.8    1
(FH881359) OSB_543002xl16f1.ab1 OSB_543 Nicotiana tabacum ge...    46   3.8    1
(FH565977) CHO_OF4693xk15f1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.8    1
(FH196558) CHO_OF3054xb22f1.ab1 CHO_OF3 Nicotiana tabacum ge...    46   3.8    1
(FH028973) CHO_OF3170xe02r1.ab1 CHO_OF3 Nicotiana tabacum ge...    46   3.8    1
(ER812691) PPTEZ55TF Solanum tuberosum RHPOTKEY BAC ends Sol...    46   3.8    1
(EK317928) 1095462419453 Global-Ocean-Sampling_GS-31-01-01-1...    46   3.8    1
(EK096807) 1092962041959 Global-Ocean-Sampling_GS-31-01-01-1...    46   3.8    1
(EK001698) 1093025466831 Global-Ocean-Sampling_GS-30-02-01-1...    46   3.8    1
(AL617114) T3 end of clone 016BD10 of library SmBAC1 from st...    46   3.8    1
(EJ113229) 1092343164143 Global-Ocean-Sampling_GS-27-01-01-1...    46   3.8    1
(EI890578) CAH1-58K5TR CAA1Ba Cicer arietinum genomic clone ...    46   3.8    1
(EI888347) CAH1-72F9TR CAA1Ba Cicer arietinum genomic clone ...    46   3.8    1
(ED795223) GC5AG77TF Coffea arabica WGS library, 0.8-2KB Cof...    46   3.8    1
(ED679507) GM_WBb0011O18.f GM_WBb Glycine max genomic clone ...    46   3.8    1
(AL451813) T. brucei sheared genomic DNA clone 4f07, forward...    46   3.8    1
(DH598945) Rattus norvegicus DNA, BAC clone: RNB1-124B08, 5'...    46   3.8    1
(CW874602) shSc2d26-44.g_047.ab1 Whole-genome shotgun librar...    46   3.8    1
(CE777549) tigr-gss-dog-17000330643064 Dog Library Canis lup...    46   3.8    1
(CC383045) PUHCW06TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    46   3.8    1
(CC383041) PUHCW06TB ZM_0.6_1.0_KB Zea mays genomic clone ZM...    46   3.8    1
(CC207264) CH261-131K24_Sp6.1 CH261 Gallus gallus genomic cl...    46   3.8    1
(EL505524) G10_1532_1.AB1 Blood stage Plasmodium falciparum ...    46   3.8    1
(EL501989) A04_PFLAB1-M-PLATE22BR.AB1 Blood stage Plasmodium...    46   3.8    1
(EL500662) 037_PFLAB1-M-P26B.AB1 Blood stage Plasmodium falc...    46   3.8    1
(EL500557) 032_PFLAB1-M-P22B.AB1 Blood stage Plasmodium falc...    46   3.8    1
(EL498871) PFLAB1-M_F3_-P8A_C09_05.AB1 Blood stage Plasmodiu...    46   3.8    1
(EL497474) PFLAB1-L-P6A1_G01_13.AB1 Blood stage Plasmodium f...    46   3.8    1
(EL495195) E03_PFBAMHI-M-T3-PLATE31A.AB1 Blood stage Plasmod...    46   3.8    1
(EL493326) B01_PFBAMHI-M-T3-PLATE17A.AB1 Blood stage Plasmod...    46   3.8    1
(EH010255) USDA-FP_183372 Lysiphlebus testaceipes adult whol...    46   3.8    1
(EC825638) SME00006986 esmbsro2 Sawyeria marylandensis cDNA,...    46   3.8    1
(EB224229) PEG002-C-105641-501 Normalized Pedal-Pleural Gang...    46   3.8    1
(DY885809) CeleSEQ1255 Cunninghamella elegans pBluescript (E...    46   3.8    1
(DY285463) IC0AAA63CE12RM1 CitNFL Citrus clementina cDNA 5',...    46   3.8    1
(DW824103) MSAM248091_1381_2420 LCM-dissected maize shoot ap...    46   3.8    1
(DV618714) EST1221710 Glossina morsitans morsitans Fat body ...    46   3.8    1
(AV291930) Mus musculus 6 days neonate head cDNA, RIKEN full...    46   3.8    1
(DN313411) PL06015B1C12 cDNA from juvenile hermaphodites Sch...    46   3.8    1
(AU087587) Plasmodium falciparum 3D7 cDNA clone from Sugano ...    46   3.8    1
(AU087043) Plasmodium falciparum 3D7 cDNA clone from Sugano ...    46   3.8    1
(AU086904) Plasmodium falciparum 3D7 cDNA clone from Sugano ...    46   3.8    1
(AU086160) Plasmodium falciparum 3D7 cDNA clone from Sugano ...    46   3.8    1
(AU086137) Plasmodium falciparum 3D7 cDNA clone from Sugano ...    46   3.8    1
(CT774055) Paramecium tetraurelia 5-PRIME EST from clone LK0...    46   3.8    1
(CT610533) Danio rerio EST, clone ZF_mu_143f14 5'.                 46   3.8    1
(AM211986) Paracentrotus lividus EST, clone MPMGp1174M0223Q,...    46   3.8    1
(CK305763) SB02031A2C11.f1 normalized Keck-Tagu Library SB02...    46   3.8    1
(CD118693) ME1-0050T-L161-H03-U.B ME1-0050 Schistosoma manso...    46   3.8    1
(CD118658) ME1-0050T-L161-E03-U.B ME1-0050 Schistosoma manso...    46   3.8    1
(C93316) Dictyostelium discoideum slug cDNA, clone SSM617.         46   3.8    1
(AI483057) EST242380 tomato shoot, Cornell Solanum lycopersi...    46   3.8    1
(BU498571) PfESToab98h12.y1 Plasmodium falciparum 3D7 asexua...    46   3.8    1
(BU496655) PfESToab53a10.y1 Plasmodium falciparum 3D7 asexua...    46   3.8    1
(BU496381) PfESToac07d01.y1 Plasmodium falciparum 3D7 asexua...    46   3.8    1
(BQ451441) PfESToaa99c03.y1 Plasmodium falciparum 3D7 asexua...    46   3.8    1
(BM273742) PfESToaa58h12.y1 Plasmodium falciparum 3D7 gameto...    46   3.8    1
(BM273665) PfESToaa57h06.y1 Plasmodium falciparum 3D7 gameto...    46   3.8    1
(BI897464) fm06f01.y1 Zebrafish adult retina cDNA Danio reri...    46   3.8    1
(BI816340) PfESToaa39c07.y1 Plasmodium falciparum 3D7 asexua...    46   3.8    1
(BI814779) PfESToaa06c05.y1 Plasmodium falciparum 3D7 asexua...    46   3.8    1
(BF500397) AT15271.5prime AT Drosophila melanogaster adult t...    46   3.8    1
(BF495911) AT09592.5prime AT Drosophila melanogaster adult t...    46   3.8    1
(BF009583) ss81b01.y1 Gm-c1064 Glycine max cDNA clone GENOME...    46   3.8    1
(BE976269) bs48g08.y1 Drosophila melanogaster adult testis l...    46   3.8    1
(BB646842) Mus musculus 10 days neonate cerebellum cDNA, RIK...    46   3.8    1
(GD964821) 454GmaGlobSeed707470 Soybean Seeds Containing Glo...    46   3.8    1
(FK022694) GLRA861TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq...    46   3.8    1
(FG075072) UI-FF-IF0-abk-b-07-0-UI.r1 Ceratitis capitata emb...    46   3.8    1
(FE162980) LV_LO_RA032J12f Litopenaeus vannamei lymphoid org...    46   3.8    1
(FD426113) Atr01b_8_E03_C010.g1 FGP Male Amborella trichopod...    46   3.8    1
(FC583671) CAXP2137.fwd CAXP Lottia gigantea from head, foot...    46   3.8    1
(EY780737) CR05-C1-103-066-C03-CT.F Mandarin leaf, infected ...    46   3.8    1
(EY706341) CS00-C3-701-055-C10-CT.F Sweet orange fruit, deve...    46   3.8    1
(EY496084) CBBP2699.rev CBBP Hirudo medicinalis hermaphrodit...    46   3.8    1
(EY492625) CBBP18994.fwd CBBP Hirudo medicinalis hermaphrodi...    46   3.8    1
(EY492624) CBBP18994.rev CBBP Hirudo medicinalis hermaphrodi...    46   3.8    1
(EY389572) CAXA7919.fwd CAXA Helobdella robusta Subtracted L...    46   3.8    1
(EY386401) CAXA6202.fwd CAXA Helobdella robusta Subtracted L...    46   3.8    1
(EY380567) CAXA2949.fwd CAXA Helobdella robusta Subtracted L...    46   3.8    1
(EY380566) CAXA2949.rev CAXA Helobdella robusta Subtracted L...    46   3.8    1
(EY369553) CAXA12425.rev CAXA Helobdella robusta Subtracted ...    46   3.8    1
(EY369022) CAXA12136.fwd CAXA Helobdella robusta Subtracted ...    46   3.8    1
(EY363674) CAWZ890.fwd CAWZ Helobdella robusta Primary Late ...    46   3.8    1
(EY362431) CAWZ8246.rev CAWZ Helobdella robusta Primary Late...    46   3.8    1
(EY357786) CAWZ5438.rev CAWZ Helobdella robusta Primary Late...    46   3.8    1
(EY356447) CAWZ4363.rev CAWZ Helobdella robusta Primary Late...    46   3.8    1
(EY353380) CAWZ2071.fwd CAWZ Helobdella robusta Primary Late...    46   3.8    1
(EY352330) CAWZ1872.rev CAWZ Helobdella robusta Primary Late...    46   3.8    1
(EY352144) CAWZ18540.fwd CAWZ Helobdella robusta Primary Lat...    46   3.8    1
(EY348775) CAWZ16673.rev CAWZ Helobdella robusta Primary Lat...    46   3.8    1
(EY348614) CAWZ16589.fwd CAWZ Helobdella robusta Primary Lat...    46   3.8    1
(EY348171) CAWZ16349.rev CAWZ Helobdella robusta Primary Lat...    46   3.8    1
(EY347845) CAWZ16176.fwd CAWZ Helobdella robusta Primary Lat...    46   3.8    1
(EY347844) CAWZ16176.rev CAWZ Helobdella robusta Primary Lat...    46   3.8    1
(EY347366) CAWZ15578.rev CAWZ Helobdella robusta Primary Lat...    46   3.8    1

>(BJ374428) Dictyostelium discoideum cDNA clone:ddc7c20, 3' end,
           single read.
          Length = 637

 Score =  733 bits (370), Expect(2) = 0.0
 Identities = 370/370 (100%)
 Strand = Plus / Minus


Query: 1   attcatcaacaaggtttaatggtttcattaaagtgttttaaatcaccatctctctttcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 attcatcaacaaggtttaatggtttcattaaagtgttttaaatcaccatctctctttcaa 578


Query: 61  agaaatgcgggtctcaatgatataattagattttgtaaatcagaaagtaatagtaacaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 agaaatgcgggtctcaatgatataattagattttgtaaatcagaaagtaatagtaacaat 518


Query: 121 agtagttttatgttaagaaatcaacaattttcaatttatgtagcaccacataaaattgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 agtagttttatgttaagaaatcaacaattttcaatttatgtagcaccacataaaattgtt 458


Query: 181 gaatggttaaaagaaaatcaagttgttgaattattatatggtgaaacaagtcatattcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gaatggttaaaagaaaatcaagttgttgaattattatatggtgaaacaagtcatattcaa 398


Query: 241 ttattacaaaaatgtacagatatattaaaattccttgcagaacaaaaagcatttgataga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttattacaaaaatgtacagatatattaaaattccttgcagaacaaaaagcatttgataga 338


Query: 301 aagtatttagacttgatatggtcagcatctgaaggaaaacatgaaacaatagagaatgca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aagtatttagacttgatatggtcagcatctgaaggaaaacatgaaacaatagagaatgca 278


Query: 361 atctatgata 370
           ||||||||||
Sbjct: 277 atctatgata 268

 Score =  529 bits (267), Expect(2) = 0.0
 Identities = 267/267 (100%)
 Strand = Plus / Minus


Query: 372 gtattggagcgatcgctccattacttccacctgaagatatcgattatctctttgacaagg 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gtattggagcgatcgctccattacttccacctgaagatatcgattatctctttgacaagg 208


Query: 432 ttcaaatgattccctacaatcattacactcaaataacattgaatttagtacgttcattaa 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ttcaaatgattccctacaatcattacactcaaataacattgaatttagtacgttcattaa 148


Query: 492 ctcaaagacaacaacaagccaccaattccgatggtattacatcaagaggtttggatatat 551
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ctcaaagacaacaacaagccaccaattccgatggtattacatcaagaggtttggatatat 88


Query: 552 tttggaatttaatgcaagaagattgtgatgtttgtaatgatctctccaatgcatcattgg 611
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  tttggaatttaatgcaagaagattgtgatgtttgtaatgatctctccaatgcatcattgg 28


Query: 612 tttcacttcaagattctttccaattct 638
           |||||||||||||||||||||||||||
Sbjct: 27  tttcacttcaagattctttccaattct 1

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,597,502,431
Number of extensions: 102053378
Number of successful extensions: 11365971
Number of sequences better than 10.0: 591
Length of query: 1490
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1466
Effective length of database: 96,409,374,237
Effective search space: 141336142631442
Effective search space used: 141336142631442
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.20
Homology vs Protein 
Query= Contig-U16102-1 (Contig-U16102-1Q) /CSM_Contig/Contig-U16102-1Q.Seq.d
         (1490 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q8CCH0) RecName: Full=Ubiquitin carboxyl-terminal hydrolase 34;...    68   1e-09
AB011142_1(AB011142|pid:none) Homo sapiens mRNA for KIAA0570 pro...    68   1e-09
AJ586138_1(AJ586138|pid:none) Homo sapiens mRNA for ubiquitin-sp...    68   1e-09
AK148805_1(AK148805|pid:none) Mus musculus 2 days neonate sympat...    68   1e-09
T00338(T00338)hypothetical protein KIAA0570 - human                    68   1e-09
BC154516_1(BC154516|pid:none) Danio rerio similar to ubiquitin s...    67   1e-09
FJ532267_1(FJ532267|pid:none) Gorilla gorilla isolate PR00573 ub...    53   3e-05
AE014297_3732(AE014297|pid:none) Drosophila melanogaster chromos...    53   3e-05
Y13619_1(Y13619|pid:none) Homo sapiens mRNA for DFFRY protein, r...    53   3e-05
Y13618_1(Y13618|pid:none) Homo sapiens mRNA for DFFRY protein, a...    53   3e-05
AE014297_3731(AE014297|pid:none) Drosophila melanogaster chromos...    53   3e-05
FJ627275_1(FJ627275|pid:none) Bos taurus Usp9y mRNA, complete cds.     52   4e-05
AK294828_1(AK294828|pid:none) Homo sapiens cDNA FLJ60509 complet...    52   4e-05
FJ195366_1(FJ195366|pid:none) Bos taurus Y-linked ubiquitin-spec...    52   4e-05
BX545856_3(BX545856|pid:none) Zebrafish DNA sequence from clone ...    52   4e-05
(Q93008) RecName: Full=Probable ubiquitin carboxyl-terminal hydr...    52   4e-05
BC172429_1(BC172429|pid:none) Synthetic construct Homo sapiens c...    52   4e-05
AL669967_1(AL669967|pid:none) Mouse DNA sequence from clone RP23...    52   6e-05
(P70398) RecName: Full=Probable ubiquitin carboxyl-terminal hydr...    52   6e-05
DQ086491_1(DQ086491|pid:none) Mus musculus ubiquitin specific pr...    52   6e-05
BC172601_1(BC172601|pid:none) Synthetic construct Mus musculus c...    50   3e-04
B49132(B49132;A49132) fat facets (faf) splice form 1 - fruit fly...    46   0.003
(P55824) RecName: Full=Probable ubiquitin carboxyl-terminal hydr...    46   0.003
AE014297_5000(AE014297|pid:none) Drosophila melanogaster chromos...    46   0.003
L04960_1(L04960|pid:none) Drosophila melanogaster fat facets (fa...    46   0.003
EU974182_1(EU974182|pid:none) Zea mays clone 442221 hypothetical...    37   1.9
AP007171_732(AP007171|pid:none) Aspergillus oryzae RIB40 genomic...    36   3.2
AC183493_9(AC183493|pid:none) Brassica oleracea Contig B, comple...    36   4.2
AM292330_1(AM292330|pid:none) Tribolium castaneum gr9 gene for g...    35   9.3

>(Q8CCH0) RecName: Full=Ubiquitin carboxyl-terminal hydrolase 34;
                 EC=3.1.2.15; AltName: Full=Ubiquitin thioesterase
           34; AltName: Full=Ubiquitin-specific-processing protease
           34; AltName: Full=Deubiquitinating enzyme 34;
          Length = 3582

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/112 (31%), Positives = 66/112 (58%)
 Frame = +1

Query: 7   QQGLMVSLKCFKSPSLFQRNAGLNDIIRFCKSESNSNNSSFMLRNQQFSIYVAPHKIVEW 186
           ++ L ++ K F SP+L  R AGL+ I     + ++  N+  ++ + + SI     ++ +W
Sbjct: 312 KESLDLAFKYFMSPTLTMRLAGLSQITNQLHTFNDVCNNESLVSDTETSI---AKELADW 368

Query: 187 LKENQVVELLYGETSHIQLLQKCTDILKFLAEQKAFDRKYLDLIWSASEGKH 342
           L  N VVE ++G   HI+++++C  IL FLA +     +++D IW+A++ KH
Sbjct: 369 LISNNVVEHIFGPNLHIEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH 420

 Score = 38.9 bits (89), Expect = 0.49
 Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 4/156 (2%)
 Frame = +2

Query: 443  PYNHYTQITLNLVRSLTQRQQQATNSDGITSRGLDIFWNLMQED--CDVCNDLSNASLVS 616
            P  H  Q + N V  +        N D +  +G  + W+++Q+D   ++   L N +
Sbjct: 872  PAVHKHQFSSNAVTDI--------NLDNVCKKGNTLLWDIVQDDDAINLSEGLINEAEKL 923

Query: 617  LQDSFQFYPNQ--RGHFLTRALDHIDKHRSVVVSLRLVFHLINSFAEKKKKRDLHGGXXX 790
            L     ++ ++  R  F+   L+++  +RSVV+SLRL+  L  +F +     D H
Sbjct: 924  LCSLVCWFTDRQIRMRFIEGCLENLGNNRSVVISLRLLPKLFGTFQQFGSSYDTH----- 978

Query: 791  XXXXXXXXXXXXXXVIESIDSQHHLVDLLYNHLVYY 898
                          +    + + +++ L +++LVYY
Sbjct: 979  -------------WITMWAEKELNMMKLFFDNLVYY 1001

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,072,242,753
Number of extensions: 38890758
Number of successful extensions: 114321
Number of sequences better than 10.0: 29
Number of HSP's gapped: 114259
Number of HSP's successfully gapped: 34
Length of query: 496
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 363
Effective length of database: 620,718,517
Effective search space: 225320821671
Effective search space used: 225320821671
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.59  gvh: 0.38  alm: 0.51  top: 0.53  tms: 0.00  mit: 0.15  mip: 0.02
 nuc: 4.56  erl: 0.00  erm: 0.80  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 72.0 %: nuclear
	 20.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial

>> prediction for Contig-U16102-1 is nuc
VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 2
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0