| Contig-U16336-1 |
| Contig ID |
Contig-U16336-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
3532 |
| Chromosome number (1..6, M) |
3 |
| Chromosome length |
6358359 |
| Start point |
2196533 |
| End point |
2193017 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
58 |
| Number of EST |
83 |
| Link to clone list |
U16336 |
| List of clone(s) |
est1=SHB371F,1,644
est2=VHP417F,1,544
est3=SHK120F,5,574
est4=SHF187F,13,576
est5=SHL605F,13,636
est6=AHA181F,16,674
est7=AHI176F,16,516
est8=SHI615F,16,635
est9=SHJ481F,16,637
est10=AHO726F,18,423
est11=AHF252F,19,512
est12=AHH276F,19,513
est13=AHI342F,19,643
est14=AHI847F,19,577
est15=AHQ883F,19,577
est16=AHR340F,19,543
est17=CHR478F,19,579
est18=VHJ112F,19,555
est19=VHL434F,19,555
est20=SHH419F,22,641
est21=AHL367F,25,639
est22=CHJ633F,25,574
est23=CHN802F,25,559
est24=VHH681F,25,637
est25=VHN748F,25,639
est26=VHL879F,27,643
est27=SFH459F,30,637
est28=AFG346F,33,639
est29=CHE687F,33,645
est30=SHJ269F,33,639
est31=VHH647F,33,578
est32=VHO578F,33,650
est33=AHO519F,34,641
est34=SHA829F,34,641
est35=SHD415F,34,641
est36=AFG322F,37,1059
est37=AHN471F,37,637
est38=VHA740F,37,638
est39=AHJ645F,39,557
est40=AHO212F,39,651
est41=VHA534F,47,641
est42=AHF385F,48,642
est43=AHB126F,50,637
est44=VHK160F,50,576
est45=VHO279F,50,577
est46=AHP712F,101,444
est47=AHP827F,101,444
est48=CHL747F,101,444
est49=SHD866F,126,646
est50=SHI658F,159,739
est51=AHH720F,164,444
est52=VHA625F,497,1101
est53=CHQ643F,526,1148
est54=CHD491F,1056,1604
est55=AHF385Z,1378,2130
est56=VHH681Z,1395,2142
est57=CHH605Z,1509,2142
est58=AHN471Z,1522,2306
est59=AHL367Z,1528,2332
est60=VHK160Z,1529,2316
est61=VHN748Z,1529,2319
est62=CHL747Z,1530,2315
est63=CHN802Z,1533,2314
est64=AHO526Z,1534,2297
est65=VHA740Z,1544,2339
est66=VHL434Z,1544,2318
est67=VHL879Z,1581,2318
est68=SFH459Z,1589,2316
est69=VHO578Z,1615,2305
est70=AFG346Z,1640,2308
est71=AFG322Z,1670,2297
est72=VHO279Z,1718,2272
est73=AHA181Z,1720,2383
est74=AHI342Z,1813,2560
est75=AHB126Z,1824,2317
est76=VHH647Z,1882,2675
est77=AHN548Z,1892,2305
est78=AHP712Z,1894,2482
est79=CHJ633Z,1968,2678
est80=SLC526F,1987,2626
est81=CHD491Z,2258,2960
est82=SHF187Z,2640,3352
est83=SLC526Z,2974,3532
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 3.28 |
| Homology vs DNA |
Query= Contig-U16336-1 (Contig-U16336-1Q) /CSM_Contig/Contig-U16336-1Q.Seq.d
(3532 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ351049) Dictyostelium discoideum cDNA clone:dda41j21, 3' ... 1328 0.0 3
(BJ441447) Dictyostelium discoideum cDNA clone:ddv46a22, 3' ... 1294 0.0 3
(BJ406333) Dictyostelium discoideum cDNA clone:dds34m21, 3' ... 1237 0.0 2
(BJ370759) Dictyostelium discoideum cDNA clone:ddc55e12, 5' ... 1235 0.0 1
(BJ418281) Dictyostelium discoideum cDNA clone:ddv32a08, 5' ... 1199 0.0 1
(BJ363851) Dictyostelium discoideum cDNA clone:ddc28f24, 5' ... 1088 0.0 1
(BJ380128) Dictyostelium discoideum cDNA clone:ddc37i02, 3' ... 1057 0.0 3
(BJ355620) Dictyostelium discoideum cDNA clone:dda57n18, 3' ... 1035 0.0 5
(BJ354421) Dictyostelium discoideum cDNA clone:dda53f17, 3' ... 1031 0.0 2
(BJ445109) Dictyostelium discoideum cDNA clone:ddv58p11, 3' ... 1029 0.0 5
(BJ382646) Dictyostelium discoideum cDNA clone:ddc45n11, 3' ... 1027 0.0 3
(BJ442993) Dictyostelium discoideum cDNA clone:ddv51g15, 3' ... 1021 0.0 3
(BJ384317) Dictyostelium discoideum cDNA clone:ddc49d02, 3' ... 1021 0.0 5
(BJ356421) Dictyostelium discoideum cDNA clone:dda60c07, 3' ... 1019 0.0 3
(BJ436862) Dictyostelium discoideum cDNA clone:ddv32p09, 3' ... 999 0.0 2
(BJ400950) Dictyostelium discoideum cDNA clone:dds15f16, 3' ... 902 0.0 2
(BJ445865) Dictyostelium discoideum cDNA clone:ddv60k19, 3' ... 852 0.0 4
(BJ342309) Dictyostelium discoideum cDNA clone:dda13l11, 3' ... 809 0.0 4
(BJ342259) Dictyostelium discoideum cDNA clone:dda13l05, 3' ... 737 0.0 3
(BJ444015) Dictyostelium discoideum cDNA clone:ddv54n20, 3' ... 668 0.0 7
(BJ443546) Dictyostelium discoideum cDNA clone:ddv53d10, 3' ... 668 0.0 8
(BJ347957) Dictyostelium discoideum cDNA clone:dda31a21, 3' ... 640 0.0 3
(BJ441343) Dictyostelium discoideum cDNA clone:ddv46m12, 3' ... 484 0.0 3
(BJ352603) Dictyostelium discoideum cDNA clone:dda47d11, 3' ... 484 0.0 3
(BJ396141) Dictyostelium discoideum cDNA clone:dds41c16, 5' ... 597 0.0 2
(BJ330492) Dictyostelium discoideum cDNA clone:dda31a21, 5' ... 513 0.0 4
(BJ409589) Dictyostelium discoideum cDNA clone:dds42i18, 3' ... 484 0.0 5
(BJ392180) Dictyostelium discoideum cDNA clone:dds26n17, 5' ... 513 0.0 4
(BJ334646) Dictyostelium discoideum cDNA clone:dda47d11, 5' ... 513 0.0 3
(BJ426283) Dictyostelium discoideum cDNA clone:ddv58p11, 5' ... 914 0.0 2
(BJ397657) Dictyostelium discoideum cDNA clone:dds47i02, 5' ... 513 0.0 3
(BJ396386) Dictyostelium discoideum cDNA clone:dds42b22, 5' ... 513 0.0 3
(BJ395220) Dictyostelium discoideum cDNA clone:dds38f06, 5' ... 513 0.0 3
(BJ426978) Dictyostelium discoideum cDNA clone:ddv60k19, 5' ... 513 0.0 3
(AU034288) Dictyostelium discoideum slug cDNA, clone SLC526. 1015 0.0 1
(BJ356984) Dictyostelium discoideum cDNA clone:dda62h03, 3' ... 484 0.0 3
(BJ396044) Dictyostelium discoideum cDNA clone:dds41m04, 5' ... 513 0.0 3
(BJ381347) Dictyostelium discoideum cDNA clone:ddc41a10, 3' ... 484 0.0 4
(BJ364490) Dictyostelium discoideum cDNA clone:ddc31m22, 5' ... 513 0.0 3
(BJ337816) Dictyostelium discoideum cDNA clone:dda59g04, 5' ... 513 0.0 3
(BJ336341) Dictyostelium discoideum cDNA clone:dda53f17, 5' ... 513 0.0 3
(BJ445576) Dictyostelium discoideum cDNA clone:ddv59m20, 3' ... 634 0.0 2
(BJ325236) Dictyostelium discoideum cDNA clone:dda13l11, 5' ... 513 0.0 3
(BJ391833) Dictyostelium discoideum cDNA clone:dds25j08, 5' ... 513 0.0 3
(BJ396349) Dictyostelium discoideum cDNA clone:dds42i18, 5' ... 513 0.0 3
(BJ391196) Dictyostelium discoideum cDNA clone:dds15f16, 5' ... 511 0.0 3
(BJ425194) Dictyostelium discoideum cDNA clone:ddv54n20, 5' ... 513 0.0 3
(BJ338089) Dictyostelium discoideum cDNA clone:dda60e05, 5' ... 513 0.0 3
(BJ422689) Dictyostelium discoideum cDNA clone:ddv46a22, 5' ... 513 0.0 3
(BJ325183) Dictyostelium discoideum cDNA clone:dda13l05, 5' ... 513 0.0 3
(BJ418354) Dictyostelium discoideum cDNA clone:ddv32p09, 5' ... 513 0.0 3
(BJ418293) Dictyostelium discoideum cDNA clone:ddv32c09, 5' ... 513 0.0 3
(BJ333215) Dictyostelium discoideum cDNA clone:dda41j21, 5' ... 513 0.0 3
(BJ393123) Dictyostelium discoideum cDNA clone:dds30n04, 5' ... 513 0.0 4
(AU060987) Dictyostelium discoideum slug cDNA, clone SLC526. 484 0.0 4
(BJ337502) Dictyostelium discoideum cDNA clone:dda57n18, 5' ... 513 0.0 3
(BJ330926) Dictyostelium discoideum cDNA clone:dda33c07, 5' ... 513 0.0 3
(BJ393498) Dictyostelium discoideum cDNA clone:dds31d18, 5' ... 513 0.0 2
(BJ371162) Dictyostelium discoideum cDNA clone:ddc56l20, 5' ... 513 0.0 3
(BJ334968) Dictyostelium discoideum cDNA clone:dda48n12, 5' ... 513 0.0 3
(BJ394382) Dictyostelium discoideum cDNA clone:dds34m21, 5' ... 513 0.0 3
(BJ339289) Dictyostelium discoideum cDNA clone:dda64f22, 5' ... 513 0.0 3
(BJ367069) Dictyostelium discoideum cDNA clone:ddc41a10, 5' ... 777 0.0 2
(BJ396824) Dictyostelium discoideum cDNA clone:dds44g05, 5' ... 513 0.0 4
(BJ422585) Dictyostelium discoideum cDNA clone:ddv46m12, 5' ... 513 0.0 3
(BJ427017) Dictyostelium discoideum cDNA clone:ddv61b06, 5' ... 513 0.0 3
(BJ423398) Dictyostelium discoideum cDNA clone:ddv49g03, 5' ... 513 0.0 3
(BJ424700) Dictyostelium discoideum cDNA clone:ddv53d10, 5' ... 513 0.0 3
(BJ424159) Dictyostelium discoideum cDNA clone:ddv51g15, 5' ... 513 0.0 3
(BJ426694) Dictyostelium discoideum cDNA clone:ddv59m20, 5' ... 513 0.0 3
(BJ369030) Dictyostelium discoideum cDNA clone:ddc49d02, 5' ... 513 0.0 3
(BJ376505) Dictyostelium discoideum cDNA clone:ddc28f24, 3' ... 341 0.0 4
(BJ348446) Dictyostelium discoideum cDNA clone:dda33c07, 3' ... 446 0.0 4
(BJ339469) Dictyostelium discoideum cDNA clone:dda65p09, 5' ... 507 0.0 3
(BJ335478) Dictyostelium discoideum cDNA clone:dda50i12, 5' ... 408 0.0 4
(BJ334790) Dictyostelium discoideum cDNA clone:dda47g19, 5' ... 513 0.0 3
(BJ334296) Dictyostelium discoideum cDNA clone:dda45g20, 5' ... 513 0.0 3
(BJ333137) Dictyostelium discoideum cDNA clone:dda41g14, 5' ... 513 0.0 3
(BJ338146) Dictyostelium discoideum cDNA clone:dda60d07, 5' ... 486 e-172 2
(BJ355859) Dictyostelium discoideum cDNA clone:dda58o11, 3' ... 355 e-170 3
(BJ338577) Dictyostelium discoideum cDNA clone:dda62h03, 5' ... 513 e-140 1
(BJ338621) Dictyostelium discoideum cDNA clone:dda62f08, 5' ... 507 e-139 1
(BJ368136) Dictyostelium discoideum cDNA clone:ddc45n11, 5' ... 505 e-138 1
(BJ334371) Dictyostelium discoideum cDNA clone:dda46h05, 5' ... 502 e-137 1
(FC717199) CBBG11344.fwd CBBG Lottia gigantea 12,15,18h embr... 52 1e-08 4
(FK912876) EST_lsal_evj_933493 lsalevj mixed_tissue_mixed_st... 68 2e-06 1
(FK912875) EST_lsal_evj_939253 lsalevj mixed_tissue_mixed_st... 68 2e-06 1
(FC747865) CBBI3513.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 60 1e-05 2
(FC302195) CAIC1302.fwd CAIC Nematostella vectensis Nemve wh... 50 4e-05 2
(EY267011) BF01045A1E09.f1 Normalized subtracted keck librar... 40 5e-05 3
(DB731624) Apis mellifera head cDNA, RIKEN full-length enric... 56 1e-04 2
(EC374033) G840P35FI4.T0 Oscarella carmela pSport1 Library I... 60 2e-04 2
(BJ615522) Xenopus laevis cDNA clone:XL172g12, 5' end. 50 2e-04 3
(ES543412) Kr_K06_02J17_attB1_seq K06 Euphausia superba cDNA... 42 6e-04 3
(DW673401) CNB376-D04.y1d-s SHGC-CNB2 Gasterosteus aculeatus... 60 6e-04 1
(DW665490) CNB331-F04.y1d-s SHGC-CNB2 Gasterosteus aculeatus... 60 6e-04 1
(FC759708) CBBN11620.fwd CBBN Lottia gigantea 3,4,5,6.5d Lar... 60 6e-04 1
(GE099529) 454GmaGlobSeed842177 Soybean Seeds Containing Glo... 46 0.001 3
(GD962339) 454GmaGlobSeed704988 Soybean Seeds Containing Glo... 46 0.001 3
(GD820841) 454GmaGlobSeed563490 Soybean Seeds Containing Glo... 40 0.001 3
(GD711678) 454GmaGlobSeed454327 Soybean Seeds Containing Glo... 40 0.001 3
(DV184442) CT035_G07_CT035_3700_90.ab1 C. tentans tissue cul... 58 0.002 1
(DT764647) EST1198496 Aquilegia cDNA library Aquilegia formo... 58 0.002 1
(GE567273) CCHT24996.b1_G09.ab1 CCHT Niger Seed Guizotia aby... 58 0.002 1
(GE559114) CCHT17189.b1_J02.ab1 CCHT Niger Seed Guizotia aby... 58 0.002 1
(EB493832) 1099435177386 12-DrosW-norm-1P5Kb Drosophila will... 36 0.003 5
(BE210625) so51b12.y1 Gm-c1039 Glycine max cDNA clone GENOME... 40 0.004 3
(BW678407) Glycine max cDNA clone: GMFL01-43-H15, 5'end. 40 0.006 3
(DB963056) Glycine max cDNA, clone: GMFL02-22-D14, 5'end. 40 0.008 3
(CO384645) AGENCOURT_26188005 Blumberg_Cho dorsal blastopore... 50 0.008 2
(BW670125) Glycine max cDNA clone: GMFL01-31-F20, 5'end. 40 0.009 3
(AW567813) si66b07.y1 Gm-r1030 Glycine max cDNA clone GENOME... 40 0.009 3
(AW306356) se49f06.y1 Gm-c1017 Glycine max cDNA clone GENOME... 40 0.010 3
(BE330496) so79c12.y1 Gm-c1040 Glycine max cDNA clone GENOME... 40 0.010 3
(EH708495) CCIS7793.b1_B05.ab1 CCI(LMS) chicory Cichorium in... 40 0.010 3
(AJ480350) Hordeum vulgare EST clone S0001100129B03F1. 36 0.012 3
(CF806931) psHB017xJ11f USDA-IFAFS:Expression of Phytophthor... 40 0.013 3
(BW656075) Glycine max cDNA clone: GMFL01-10-I01, 3'end. 40 0.016 3
(BW656074) Glycine max cDNA clone: GMFL01-10-I01, 5'end. 40 0.016 3
(CK605852) gmrhRww6-05_A04_T7 Soybean root hair subtracted c... 40 0.017 3
(CX455753) JGI_XZG53260.rev NIH_XGC_tropGas7 Xenopus (Silura... 40 0.018 2
(CX455754) JGI_XZG53260.fwd NIH_XGC_tropGas7 Xenopus (Silura... 40 0.018 2
(AK285487) Glycine max cDNA, clone: GMFL01-10-I01. 40 0.020 3
(AL677101) Xenopus tropicalis EST, clone TNeu055p04 5'. 40 0.021 2
(AL897561) Xenopus tropicalis EST, clone TEgg100l04 5'. 40 0.021 2
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 34 0.024 16
(AL682800) Xenopus tropicalis EST, clone TGas059d08 5'. 40 0.024 2
(BX749064) Xenopus tropicalis EST, clone TGas051i22 3'. 40 0.025 2
(AL683193) Xenopus tropicalis EST, clone TGas062d09 5'. 40 0.026 2
(CX312276) JGI_XZT11844.rev NIH_XGC_tropTad5 Xenopus (Silura... 40 0.027 2
(CB869782) HC12H01w CH Hordeum vulgare cDNA clone HC12H01 5-... 46 0.027 2
(CR561095) Xenopus tropicalis EST, clone THdA007f16 3'. 40 0.027 2
(CX412592) JGI_XZT29124.rev NIH_XGC_tropTad5 Xenopus (Silura... 40 0.028 2
(AC115594) Dictyostelium discoideum chromosome 2 map 4071862... 48 0.028 4
(CX396638) JGI_XZT56573.rev NIH_XGC_tropTad5 Xenopus (Silura... 40 0.028 2
(FC846391) CBHN4206.rev CBHN Metridium senile tentacle Metri... 52 0.029 2
(EL815798) CBWN1961.g1 NICHD_XGC_tropTe1 Xenopus (Silurana) ... 40 0.029 2
(CJ447531) Macaca fascicularis mRNA, clone: QflA-12866, 5' e... 44 0.030 2
(CX904889) JGI_CAAM15082.rev NIH_XGC_tropTe3 Xenopus (Silura... 40 0.030 2
(CX513454) JGI_XZG57958.rev NIH_XGC_tropGas7 Xenopus (Silura... 40 0.030 2
(DC145808) Xenopus (Silurana) tropicalis NBRP cDNA clone: rs... 40 0.031 2
(EL675136) CBST6416.rev NICHD_XGC_tropThy1 Xenopus (Silurana... 40 0.031 2
(CX443149) JGI_XZG8795.fwd NIH_XGC_tropGas7 Xenopus (Siluran... 40 0.031 2
(EX200821) SGT20r1_C11 normalized library from a mix of tamm... 52 0.032 2
(CX408691) JGI_XZT31763.rev NIH_XGC_tropTad5 Xenopus (Silura... 40 0.032 2
(CX390101) JGI_XZT38061.rev NIH_XGC_tropTad5 Xenopus (Silura... 40 0.032 2
(CX330171) JGI_XZT16204.rev NIH_XGC_tropTad5 Xenopus (Silura... 40 0.032 2
(CX418606) JGI_XZG65640.rev NIH_XGC_tropGas7 Xenopus (Silura... 40 0.032 2
(CX798545) JGI_CAAJ13344.rev NIH_XGC_tropBrn2 Xenopus (Silur... 40 0.032 2
(CX396639) JGI_XZT56573.fwd NIH_XGC_tropTad5 Xenopus (Silura... 40 0.033 2
(CX423400) JGI_XZG63517.rev NIH_XGC_tropGas7 Xenopus (Silura... 40 0.033 2
(CX337733) JGI_XZT59692.fwd NIH_XGC_tropTad5 Xenopus (Silura... 40 0.033 2
(CX412993) JGI_XZT29526.rev NIH_XGC_tropTad5 Xenopus (Silura... 40 0.033 2
(EL823686) CBWN7253.g1 NICHD_XGC_tropTe1 Xenopus (Silurana) ... 40 0.033 2
(DN061548) JGI_CABC1763.fwd NIH_XGC_tropFat1 Xenopus (Silura... 40 0.033 2
(DN001541) JGI_CAAQ3577.rev NIH_XGC_tropHrt1 Xenopus (Silura... 40 0.033 2
(DN063915) JGI_CABD1551.rev NIH_XGC_tropLun1 Xenopus (Silura... 40 0.033 2
(CX346851) JGI_XZT43981.rev NIH_XGC_tropTad5 Xenopus (Silura... 40 0.033 2
(CX967771) JGI_CAAP2591.rev NIH_XGC_tropInt1 Xenopus (Silura... 40 0.034 2
(DN076301) JGI_CABD9696.rev NIH_XGC_tropLun1 Xenopus (Silura... 40 0.034 2
(CX962306) JGI_CAAO11870.fwd NIH_XGC_tropTe5 Xenopus (Silura... 40 0.034 2
(CX512715) JGI_XZG57531.rev NIH_XGC_tropGas7 Xenopus (Silura... 40 0.034 2
(CX403423) JGI_XZT50430.rev NIH_XGC_tropTad5 Xenopus (Silura... 40 0.034 2
(CX925989) JGI_CAAN10740.rev NIH_XGC_tropTe4 Xenopus (Silura... 40 0.035 2
(CX338687) JGI_XZT60364.fwd NIH_XGC_tropTad5 Xenopus (Silura... 40 0.035 2
(CF151151) AGENCOURT_14909019 NICHD_XGC_Emb8 Xenopus (Silura... 40 0.035 2
(BX753607) Xenopus tropicalis EST, clone TGas101l10 3'. 40 0.035 2
(CX976527) JGI_CAAP9730.rev NIH_XGC_tropInt1 Xenopus (Silura... 40 0.035 2
(CX489518) JGI_XZG32722.rev NIH_XGC_tropGas7 Xenopus (Silura... 40 0.036 2
(CX412994) JGI_XZT29526.fwd NIH_XGC_tropTad5 Xenopus (Silura... 40 0.036 2
(CX902127) JGI_CAAM10093.fwd NIH_XGC_tropTe3 Xenopus (Silura... 40 0.036 2
(DN001542) JGI_CAAQ3577.fwd NIH_XGC_tropHrt1 Xenopus (Silura... 40 0.036 2
(CX346852) JGI_XZT43981.fwd NIH_XGC_tropTad5 Xenopus (Silura... 40 0.036 2
(BU993145) HD12L11r HD Hordeum vulgare cDNA clone HD12L11 5-... 36 0.036 3
(DT442755) JGI_CABK4454.rev NIH_XGC_tropSpl1 Xenopus (Silura... 40 0.037 2
(CR925795) Zebrafish DNA sequence from clone DKEY-25C9 in li... 54 0.037 1
(AL935329) Zebrafish DNA sequence from clone CH211-253P2 in ... 54 0.037 1
(CR847835) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 54 0.037 1
(FH245754) CHO_OF3007xa23r1.ab1 CHO_OF3 Nicotiana tabacum ge... 54 0.037 1
(FH226971) CHO_OF3396xf14f1.ab1 CHO_OF3 Nicotiana tabacum ge... 54 0.037 1
(AJ243800) Kluyveromyces lactis rim101 (partial), wsc4, ubi4... 36 0.038 4
(DU899809) 410264 Tomato HindIII BAC Library Solanum lycoper... 46 0.040 2
(CA002325) HS07C15r HS Hordeum vulgare subsp. vulgare cDNA c... 36 0.044 3
(DN180462) HO27A10S HO Hordeum vulgare cDNA clone HO27A10 5-... 36 0.051 3
(BW760351) Branchiostoma floridae cDNA, egg clone:bfeg038k17... 40 0.052 3
(CA004561) HS17P22r HS Hordeum vulgare subsp. vulgare cDNA c... 36 0.056 3
(BU966857) HB02J08r BC Hordeum vulgare subsp. vulgare cDNA c... 36 0.059 3
(BQ469640) HZ01G21r HZ Hordeum vulgare subsp. vulgare cDNA c... 36 0.066 3
(BD365229) Newly found single nucleotide polymorphisms (SNPs... 36 0.068 3
(AV937556) Hordeum vulgare subsp. spontaneum strain H602 cDN... 36 0.068 3
(AL508687) HY09I03V Hordeum vulgare cDNA clone 5'sequence; e... 36 0.070 3
(BJ549281) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 36 0.072 3
(BU987653) HF15G01r HF Hordeum vulgare subsp. vulgare cDNA c... 36 0.073 3
(CA002862) HS08L22r HS Hordeum vulgare subsp. vulgare cDNA c... 36 0.074 3
(BM375756) EBem06_SQ004_F05_R embryo, 21 DPA, no treatment, ... 36 0.074 3
(AJ464292) Hordeum vulgare EST clone S0000700018B11F1. 36 0.082 3
(CA013167) HT07J14r HT Hordeum vulgare subsp. vulgare cDNA c... 36 0.085 3
(BI779941) EBem07_SQ001_L19_R embryo, 28 DPA, no treatment, ... 36 0.088 3
(CA017576) HV05J16r HV Hordeum vulgare subsp. vulgare cDNA c... 36 0.089 3
(BF624285) HVSMEa0013G23f Hordeum vulgare seedling shoot EST... 36 0.091 3
(BQ459712) HA08F01r HA Hordeum vulgare subsp. vulgare cDNA c... 36 0.092 3
(BM372712) EBpi05_SQ003_L16_R pistil, 8 DPA, no treatment, c... 36 0.094 3
(BM376248) EBma01_SQ002_M18_R maternal, 4 DPA, no treatment,... 36 0.097 3
(DY977276) CLSS11042.b1_D02.ab1 CLS(LMS) lettuce sativa Lact... 46 0.10 2
(CB016827) pgn1c.pk013.l1 Chicken lymphoid cDNA library (pgn... 44 0.10 2
(BU424309) 603955959F1 CSEQRBN09 Gallus gallus cDNA clone Ch... 44 0.10 2
(BI780402) EBem06_SQ001_M09_R embryo, 21 DPA, no treatment, ... 36 0.10 3
(AJ432426) Hordeum vulgare EST clone S0001100084H08F1. 36 0.10 3
(BU996890) HI06D13r HI Hordeum vulgare subsp. vulgare cDNA c... 36 0.10 3
(BQ458535) HA04P02r HA Hordeum vulgare subsp. vulgare cDNA c... 36 0.10 3
(BU970710) HB15H05r BC Hordeum vulgare subsp. vulgare cDNA c... 36 0.11 3
(BQ459299) HA01J03r HA Hordeum vulgare subsp. vulgare cDNA c... 36 0.11 3
(CA023131) HZ45F06r HZ Hordeum vulgare subsp. vulgare cDNA c... 36 0.11 3
(BM375782) EBem06_SQ004_G11_R embryo, 21 DPA, no treatment, ... 36 0.11 3
(CA003748) HS15H02r HS Hordeum vulgare subsp. vulgare cDNA c... 36 0.11 3
(BQ462213) HD02A17r HD Hordeum vulgare cDNA clone HD02A17 5-... 36 0.11 3
(BI779417) EBro01_SQ003_P08_R root, 3 week, hydroponic grown... 36 0.11 3
(AL508968) HY10F05V Hordeum vulgare cDNA clone 5'sequence; e... 36 0.11 3
(BU980322) HA20F07r HA Hordeum vulgare subsp. vulgare cDNA c... 36 0.12 3
(BF065291) HV_CEb0012A14f Hordeum vulgare seedling green lea... 36 0.12 3
(BD365227) Newly found single nucleotide polymorphisms (SNPs... 36 0.12 3
(AV937472) Hordeum vulgare subsp. spontaneum strain H602 cDN... 36 0.12 3
(BU983969) HA31J12r HA Hordeum vulgare subsp. vulgare cDNA c... 36 0.12 3
(BM377485) EBem04_SQ003_E10_R embryo, 12 DPA, no treatment, ... 36 0.12 3
(BJ543899) Hordeum vulgare subsp. vulgare cv.Akashinriki cDN... 36 0.12 3
(CA021043) HZ38P02r HZ Hordeum vulgare subsp. vulgare cDNA c... 36 0.12 3
(BU981639) HA24D08r HA Hordeum vulgare subsp. vulgare cDNA c... 36 0.12 3
(BF258740) HVSMEf0016I21f Hordeum vulgare seedling root EST ... 36 0.12 3
(BD365239) Newly found single nucleotide polymorphisms (SNPs... 36 0.12 3
(AV915428) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 36 0.12 3
(BU983266) HA29C04r HA Hordeum vulgare subsp. vulgare cDNA c... 36 0.12 3
(BM097682) EBem04_SQ002_G11_R embryo, 12 DPA, no treatment, ... 36 0.12 3
(BM098136) EBpi03_SQ002_K12_R pistil, 4 DPA, no treatment, c... 36 0.13 3
(CA023204) HZ45I17r HZ Hordeum vulgare subsp. vulgare cDNA c... 36 0.13 3
(BQ458595) HA04M14r HA Hordeum vulgare subsp. vulgare cDNA c... 36 0.13 3
(BU989445) HF21M03r HF Hordeum vulgare subsp. vulgare cDNA c... 36 0.13 3
(BX746304) Xenopus tropicalis EST, clone TGas062d09 3'. 40 0.13 2
(BD365228) Newly found single nucleotide polymorphisms (SNPs... 36 0.13 3
(BU975413) HB31A24r BC Hordeum vulgare subsp. vulgare cDNA c... 36 0.13 3
(AV941158) Hordeum vulgare subsp. spontaneum strain H602 cDN... 36 0.13 3
(BU983589) HA30D17r HA Hordeum vulgare subsp. vulgare cDNA c... 36 0.13 3
(BD365226) Newly found single nucleotide polymorphisms (SNPs... 36 0.14 3
(BJ543981) Hordeum vulgare subsp. vulgare cv.Akashinriki cDN... 36 0.14 3
(AV937410) Hordeum vulgare subsp. spontaneum strain H602 cDN... 36 0.14 3
(BE601725) HVSMEh0099F01f Hordeum vulgare 5-45 DAP spike EST... 36 0.14 3
(BU972641) HB22E12r BC Hordeum vulgare subsp. vulgare cDNA c... 36 0.14 3
(CO768560) spleen_EST04286 Spleen cDNA Library Gallus gallus... 44 0.14 2
(CV062462) BNEL7C9 Barley EST endosperm library Hordeum vulg... 36 0.14 3
(BQ460277) HA06L12r HA Hordeum vulgare subsp. vulgare cDNA c... 36 0.14 3
(BG414930) HVSMEk0004E21f Hordeum vulgare testa/pericarp EST... 36 0.14 3
(BD365238) Newly found single nucleotide polymorphisms (SNPs... 36 0.14 3
(AV913800) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 36 0.14 3
(CV059257) BNEL46b3 Barley EST endosperm library Hordeum vul... 36 0.14 3
(BQ464684) HF02P12r HF Hordeum vulgare subsp. vulgare cDNA c... 36 0.14 3
(BU968828) HB08L11r BC Hordeum vulgare subsp. vulgare cDNA c... 36 0.14 3
(BD365236) Newly found single nucleotide polymorphisms (SNPs... 36 0.14 3
(AV913905) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 36 0.14 3
(CA031192) HX09E08r HX Hordeum vulgare subsp. vulgare cDNA c... 36 0.15 3
(CA030825) HX08D23r HX Hordeum vulgare subsp. vulgare cDNA c... 36 0.15 3
(ES299993) _22Y_E08 Bermudagrass Normalized cDNA Library Cyn... 42 0.15 2
(BC089713) Xenopus tropicalis MGC108319 protein, mRNA (cDNA ... 52 0.15 1
(FH371372) CHO_OF4520xl19r1.ab1 CHO_OF4 Nicotiana tabacum ge... 52 0.15 1
(DT532633) JGI_CABH4551.rev NIH_XGC_tropSkeMus1 Xenopus (Sil... 52 0.15 1
(DT408432) JGI_CABI9037.rev NIH_XGC_tropOvi1 Xenopus (Silura... 52 0.15 1
(DR872096) JGI_CABG12066.rev NIH_XGC_tropSto1 Xenopus (Silur... 52 0.15 1
(DR866505) JGI_CABG9030.fwd NIH_XGC_tropSto1 Xenopus (Silura... 52 0.15 1
(DR866504) JGI_CABG9030.rev NIH_XGC_tropSto1 Xenopus (Silura... 52 0.15 1
(DN088525) JGI_CABE2338.fwd NIH_XGC_tropOva1 Xenopus (Silura... 52 0.15 1
(DN088524) JGI_CABE2338.rev NIH_XGC_tropOva1 Xenopus (Silura... 52 0.15 1
(DN037519) JGI_CAAR12093.rev NIH_XGC_tropLiv1 Xenopus (Silur... 52 0.15 1
(DN024128) JGI_CAAR4492.fwd NIH_XGC_tropLiv1 Xenopus (Silura... 52 0.15 1
(DN015583) JGI_CAAQ12125.rev NIH_XGC_tropHrt1 Xenopus (Silur... 52 0.15 1
(CX983327) JGI_CAAP13481.rev NIH_XGC_tropInt1 Xenopus (Silur... 52 0.15 1
(CX982837) JGI_CAAP13204.rev NIH_XGC_tropInt1 Xenopus (Silur... 52 0.15 1
(CX913764) JGI_CAAN4173.fwd NIH_XGC_tropTe4 Xenopus (Siluran... 52 0.15 1
(CX905690) JGI_CAAM15531.rev NIH_XGC_tropTe3 Xenopus (Silura... 52 0.15 1
(CX893942) JGI_CAAM5555.fwd NIH_XGC_tropTe3 Xenopus (Siluran... 52 0.15 1
(CX893941) JGI_CAAM5555.rev NIH_XGC_tropTe3 Xenopus (Siluran... 52 0.15 1
(CX889186) JGI_CAAM2487.fwd NIH_XGC_tropTe3 Xenopus (Siluran... 52 0.15 1
(CX840581) JGI_CAAK9522.rev NIH_XGC_tropBrn3 Xenopus (Silura... 52 0.15 1
(CX824420) JGI_CAAK3687.rev NIH_XGC_tropBrn3 Xenopus (Silura... 52 0.15 1
(CX820877) JGI_CAAK1792.fwd NIH_XGC_tropBrn3 Xenopus (Silura... 52 0.15 1
(CX820698) JGI_CAAK1697.rev NIH_XGC_tropBrn3 Xenopus (Silura... 52 0.15 1
(CX809982) JGI_CAAJ20148.rev NIH_XGC_tropBrn2 Xenopus (Silur... 52 0.15 1
(CX806405) JGI_CAAJ17746.rev NIH_XGC_tropBrn2 Xenopus (Silur... 52 0.15 1
(CX801568) JGI_CAAJ15034.rev NIH_XGC_tropBrn2 Xenopus (Silur... 52 0.15 1
(CR586133) Xenopus tropicalis EST, clone THdA044h03 5'. 52 0.15 1
(CN113735) EC2CAA3DF10.b1 Xenopus tropicalis xthr plasmid li... 52 0.15 1
(BX733064) Xenopus tropicalis EST, clone TTpA064a02 3'. 52 0.15 1
(BX731146) Xenopus tropicalis EST, clone TTpA061p04 3'. 52 0.15 1
(BX724711) Xenopus tropicalis EST, clone TTpA049p20 3'. 52 0.15 1
(FL643767) TS31-H6 Reticulitermes flavipes symbiont library ... 52 0.15 1
(FG102676) ioAGSL2p13141516_K09_037.ab1 Pristionchus_pacific... 52 0.15 1
(ES676941) CCAX3350.b1 NICHD_XGC_tropEye1 Xenopus (Silurana)... 52 0.15 1
(CA029835) HX05F16r HX Hordeum vulgare subsp. vulgare cDNA c... 36 0.15 3
(CA019260) HV11G15r HV Hordeum vulgare subsp. vulgare cDNA c... 36 0.15 3
(BJ549562) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 36 0.15 3
(BQ759811) EBpi05_SQ004_P10_R pistil, 8 DPA, no treatment, c... 36 0.15 3
(CK123902) BES1824105p13 BES1824 Hordeum vulgare subsp. vulg... 36 0.15 3
(CB881094) HM08M04w HM Hordeum vulgare subsp. vulgare cDNA c... 36 0.15 3
(BD365237) Newly found single nucleotide polymorphisms (SNPs... 36 0.16 3
(BI955239) HVSMEm0022B05f Hordeum vulgare green seedling EST... 36 0.16 3
(AV912777) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 36 0.16 3
(CB874465) HX05F16w HX Hordeum vulgare subsp. vulgare cDNA c... 36 0.16 3
(BD365245) Newly found single nucleotide polymorphisms (SNPs... 36 0.16 3
(AV921124) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 36 0.16 3
(BQ766211) EBro08_SQ005_H11_R root, 3 week, drought-stressed... 36 0.16 3
(BQ466775) HS01I18T HS Hordeum vulgare subsp. vulgare cDNA c... 36 0.17 3
(AL508523) HY09A06V Hordeum vulgare cDNA clone 5'sequence; e... 36 0.17 3
(CB875758) HX09E08w HX Hordeum vulgare subsp. vulgare cDNA c... 36 0.17 3
(CB858222) HI06D13w HI Hordeum vulgare subsp. vulgare cDNA c... 36 0.17 3
(BD365242) Newly found single nucleotide polymorphisms (SNPs... 36 0.17 3
(AV921518) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 36 0.17 3
(BD365231) Newly found single nucleotide polymorphisms (SNPs... 36 0.17 3
(AV942356) Hordeum vulgare subsp. spontaneum strain H602 cDN... 36 0.17 3
(CV062354) BNEL79b10 Barley EST endosperm library Hordeum vu... 36 0.17 3
(BD365244) Newly found single nucleotide polymorphisms (SNPs... 36 0.18 3
(AV921412) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 36 0.18 3
(GE599239) CCPW7655.b2_N18.ab1 CCP(UWX) Globe Artichoke Cyna... 42 0.19 3
(BF260907) HVSMEf0023E03f Hordeum vulgare seedling root EST ... 36 0.19 3
(EB496063) 1099435200434 12-DrosW-norm-1P5Kb Drosophila will... 36 0.20 4
(GE604836) CCPX1887.b1_N16.ab1 CCP(UWX) Globe Artichoke Cyna... 42 0.20 3
(BG343970) HVSMEg0007E06f Hordeum vulgare pre-anthesis spike... 36 0.20 3
(EB458830) 1099435202774 12-DrosW-std-1P6Kb Drosophila willi... 36 0.21 4
(BG344143) HVSMEg0007N04f Hordeum vulgare pre-anthesis spike... 36 0.21 3
(GE600064) CCPW8425.b2_B20.ab1 CCP(UWX) Globe Artichoke Cyna... 42 0.21 3
(BF259945) HVSMEf0020L02f Hordeum vulgare seedling root EST ... 36 0.22 3
(BF621312) HVSMEa0006H07f Hordeum vulgare seedling shoot EST... 36 0.22 3
(AJ293266) Cryptosporidium parvum microsatellite, clone 9. 50 0.22 2
(GE594713) CCPW3407.b1_N12.ab1 CCP(UWX) Globe Artichoke Cyna... 42 0.22 3
(GE596472) CCPW5084.b1_G23.ab1 CCP(UWX) Globe Artichoke Cyna... 42 0.23 3
(CF709599) CCAB967TF C.neoformans strain JEC21 Cryptococcus ... 40 0.23 3
(BG367250) HVSMEi0011H15f Hordeum vulgare 20 DAP spike EST l... 36 0.23 3
(FK506962) 454GmaGlobSeed241594 Soybean Seeds Containing Glo... 34 0.25 3
(GE114053) 454GmaGlobSeed856701 Soybean Seeds Containing Glo... 34 0.26 3
(BD365246) Newly found single nucleotide polymorphisms (SNPs... 36 0.26 3
(BD365225) Newly found single nucleotide polymorphisms (SNPs... 36 0.26 3
(AW982339) HVSMEg0003A02f Hordeum vulgare pre-anthesis spike... 36 0.26 3
(AK248867) Hordeum vulgare subsp. vulgare cDNA clone: FLbaf3... 36 0.28 3
(BM166650) EST569173 PyBS Plasmodium yoelii yoelii cDNA clon... 34 0.28 3
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 34 0.29 13
(BG343488) HVSMEg0005O09f Hordeum vulgare pre-anthesis spike... 36 0.29 3
(CF700990) CCAC365TO C.neoformans strain JEC21 Cryptococcus ... 40 0.33 3
(ES543338) Kr_K06_02F24_attB1_seq K06 Euphausia superba cDNA... 42 0.34 2
(DR384641) RTHG1_3_C10.g1_A029 Roots plus added mercury Pinu... 36 0.34 3
(BJ379142) Dictyostelium discoideum cDNA clone:ddc33l24, 3' ... 40 0.34 2
(AQ111280) CIT-HSP-2379A17.TR CIT-HSP Homo sapiens genomic c... 48 0.36 2
(BM606605) 17000687083593 A.Gam.ad.cDNA.blood1 Anopheles gam... 46 0.42 2
(EE321737) AGENCOURT_86336366 NICHD_XGC_bone Xenopus laevis ... 34 0.42 2
(FC595151) CAXP9031.fwd CAXP Lottia gigantea from head, foot... 36 0.42 2
(FL996997) CCHY24530.g1 CCHY Panicum virgatum callus (N) Pan... 40 0.43 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 38 0.44 18
(AC171131) Helobdella robusta clone CH306-1A2, complete sequ... 36 0.46 8
(BX057455) Single read from an extremity of a full-length cD... 46 0.46 2
(FK642708) 454GmaGlobSeed377340 Soybean Seeds Containing Glo... 40 0.48 2
(FK583615) 454GmaGlobSeed318247 Soybean Seeds Containing Glo... 40 0.48 2
(BX410869) human full-length cDNA 5-PRIME end of clone CS0DF... 44 0.53 2
(ES299056) _40X_E12 Bermudagrass Normalized cDNA Library Cyn... 42 0.53 2
(DY887099) CeleSEQ2992 Cunninghamella elegans pBluescript (E... 50 0.55 2
(CJ458250) Macaca fascicularis mRNA, clone: QmoA-10190, 5' e... 32 0.56 4
(BX039658) Single read from an extremity of a full-length cD... 46 0.57 2
(DY885391) CeleSEQ655 Cunninghamella elegans pBluescript (Ec... 50 0.57 2
(AC121951) Mus musculus BAC clone RP24-217M7 from 9, complet... 50 0.58 1
(AC098619) Rattus norvegicus BAC CH230-125E15 () complete s... 50 0.58 1
(BX538350) Cryptosporidium parvum chromosome 6, complete seq... 50 0.58 1
(AC128026) Rattus norvegicus clone CH230-123B12, WORKING DRA... 50 0.58 1
(AC115233) Rattus norvegicus clone CH230-27C6, WORKING DRAFT... 50 0.58 1
(AC106669) Rattus norvegicus clone CH230-99L19, WORKING DRAF... 50 0.58 1
(AC212632) Solanum lycopersicum chromosome 7 clone C07HBa012... 50 0.58 1
(AC184430) Strongylocentrotus purpuratus clone R3-3089L24, W... 50 0.58 1
(AC184368) Strongylocentrotus purpuratus clone R3-4001O10, W... 50 0.58 1
(EB496697) 1099435203508 12-DrosW-norm-1P5Kb Drosophila will... 50 0.58 1
(EB495561) 1099435196770 12-DrosW-norm-1P5Kb Drosophila will... 50 0.58 1
(EB494256) 1099435179098 12-DrosW-norm-1P5Kb Drosophila will... 50 0.58 1
(EB486146) 1099341191033 12-DrosW-norm-1P5Kb Drosophila will... 50 0.58 1
(EB343238) CNSN01-F-030760-501 Normalized CNS library (juven... 50 0.58 1
(DY652245) PU4_plate57_D20 PU4 Prunus persica cDNA similar t... 50 0.58 1
(DY633450) PU1_plate16_J16 PU1 Prunus persica cDNA similar t... 50 0.58 1
(DW234780) GH_RTFR_26R_B10_InvR_14Sep04_078_R Root (free) - ... 50 0.58 1
(DT462654) GH_CHX12G14.r GH_CHX Gossypium hirsutum cDNA clon... 50 0.58 1
(DB787099) Sus scrofa mRNA, clone:ADR010063C03, 5' end, expr... 50 0.58 1
(CV496569) 60703.1 Mixed Leaf Solanum tuberosum cDNA clone 6... 50 0.58 1
(CN213194) 26751 Suspension culture Solanum tuberosum cDNA, ... 50 0.58 1
(CK271560) EST717638 potato abiotic stress cDNA library Sola... 50 0.58 1
(CK270767) EST716845 potato abiotic stress cDNA library Sola... 50 0.58 1
(CK269166) EST715244 potato abiotic stress cDNA library Sola... 50 0.58 1
(CK269165) EST715243 potato abiotic stress cDNA library Sola... 50 0.58 1
(CK265969) EST712047 potato abiotic stress cDNA library Sola... 50 0.58 1
(CK265968) EST712046 potato abiotic stress cDNA library Sola... 50 0.58 1
(CK261094) EST707172 potato abiotic stress cDNA library Sola... 50 0.58 1
(CK261093) EST707171 potato abiotic stress cDNA library Sola... 50 0.58 1
(AI490728) EST241436 tomato shoot, Cornell Solanum lycopersi... 50 0.58 1
(AI490726) EST241434 tomato shoot, Cornell Solanum lycopersi... 50 0.58 1
(BQ510129) EST617544 Generation of a set of potato cDNA clon... 50 0.58 1
(BM603479) 17000687072923 A.Gam.ad.cDNA.blood1 Anopheles gam... 50 0.58 1
(BJ414141) Dictyostelium discoideum cDNA clone:ddv18o01, 5' ... 50 0.58 1
(BI176822) EST517767 cSTE Solanum tuberosum cDNA clone cSTE6... 50 0.58 1
(BG130556) EST476202 tomato shoot/meristem Solanum lycopersi... 50 0.58 1
(BG129260) EST474906 tomato shoot/meristem Solanum lycopersi... 50 0.58 1
(BG128039) EST473685 tomato shoot/meristem Solanum lycopersi... 50 0.58 1
(GE560428) CCHT18475.b1_E11.ab1 CCHT Niger Seed Guizotia aby... 50 0.58 1
(GE558023) CCHT16143.b1_M03.ab1 CCHT Niger Seed Guizotia aby... 50 0.58 1
(FK469798) 454GmaGlobSeed204430 Soybean Seeds Containing Glo... 50 0.58 1
(FC302194) CAIC1302.rev CAIC Nematostella vectensis Nemve wh... 50 0.58 1
(ES838468) UFL_043_62 Cotton fiber 0-10 day post anthesis Go... 50 0.58 1
(ES808231) UFL_179_43 Cotton fiber 0-10 day post anthesis Go... 50 0.58 1
(ES805661) UFL_602_15 Cotton fiber 0-10 day post anthesis Go... 50 0.58 1
(BX039301) Single read from an extremity of a full-length cD... 46 0.59 2
(EL938762) cavy_003151 cavy eyeball cDNA Library Cavia porce... 38 0.60 2
(CX584890) TTE00033164 Amplicon Express - Conjugative Form T... 36 0.68 3
(FD980817) RR3GT18TF RR3(NY) Raphanus raphanistrum subsp. ra... 40 0.69 3
(FF575330) TTEFE71THC Tetrahymena thermophila conjugation cD... 36 0.72 3
(FH549005) CHO_OF4515xe12f1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 0.76 3
(AC177390) Strongylocentrotus purpuratus clone R3-53D6, WORK... 44 0.78 8
(DQ388145) Homo sapiens isolate cftr13838_B cystic fibrosis ... 48 0.80 13
(DQ356264) Homo sapiens isolate cftr14672_B cystic fibrosis ... 48 0.86 13
(DQ388135) Homo sapiens isolate cftr11321_B cystic fibrosis ... 48 0.93 13
(DQ354389) Homo sapiens isolate cftr14683_B cystic fibrosis ... 48 0.94 13
(CN113201) EC2CAA39DG03.b1 Xenopus tropicalis xthr plasmid l... 46 0.97 2
(BI816046) PfESToaa35g01.y1 Plasmodium falciparum 3D7 asexua... 38 1.00 2
(DQ388134) Homo sapiens isolate cftr11321_A cystic fibrosis ... 48 1.0 13
(FG469641) 020217KAKA006773HT (KAKA) Dormant kiwifruit buds ... 36 1.0 3
(CN113825) EC2CAA40AD03.b1 Xenopus tropicalis xthr plasmid l... 46 1.0 2
(CB360881) ZF001-P00031-DPE-F-C_E12 GISZF001 Danio rerio cDN... 40 1.1 2
(AL728278) Danio rerio embryonic inner ear subtracted cDNA l... 40 1.1 2
(DQ354390) Homo sapiens isolate cftr01814_A cystic fibrosis ... 48 1.1 13
(BI670542) PfESToaa01c01.y1 Plasmodium falciparum 3D7 asexua... 38 1.1 2
(AM447265) Vitis vinifera contig VV78X176024.8, whole genome... 42 1.1 3
(DQ354391) Homo sapiens isolate cftr01814_B cystic fibrosis ... 48 1.1 13
(EW603437) rste22_d11.y1 ste Sus scrofa cDNA 5', mRNA sequence. 36 1.2 2
(FH558421) CHO_OF4477xg06f1.ab1 CHO_OF4 Nicotiana tabacum ge... 40 1.2 2
(AW870062) NXNV_123_F07_F Nsf Xylem Normal wood Vertical Pin... 36 1.2 3
(CB361939) ZF001-P00035-DPE-F-C_C01 GISZF001 Danio rerio cDN... 40 1.2 2
(AC161722) Loxodonta africana clone VMRC15-321H13, WORKING D... 36 1.2 2
(DQ388131) Homo sapiens isolate cftr10543_B cystic fibrosis ... 48 1.2 13
(CN100773) EC2CAA18BB06.b1 Xenopus tropicalis xthr plasmid l... 46 1.2 2
(AL728333) Danio rerio embryonic inner ear subtracted cDNA l... 40 1.2 2
(CN101359) EC2CAA19AG02.b1 Xenopus tropicalis xthr plasmid l... 46 1.3 2
(CF704501) CCAGA01TF C.neoformans strain JEC21 Cryptococcus ... 40 1.3 2
(CN101360) EC2CAA19AG02.g1 Xenopus tropicalis xthr plasmid l... 46 1.3 2
(CN113785) EC2CAA40AB01.b1 Xenopus tropicalis xthr plasmid l... 46 1.3 2
(CT808578) Paramecium tetraurelia 5-PRIME EST from clone LK0... 34 1.3 3
(DQ356260) Homo sapiens isolate cftr10975_B cystic fibrosis ... 48 1.3 13
(DB965085) Glycine max cDNA, clone: GMFL02-27-N08, 5'end. 34 1.3 3
(CN100774) EC2CAA18BB06.g1 Xenopus tropicalis xthr plasmid l... 46 1.3 2
(CN116887) EC2CAA45CA03.g1 Xenopus tropicalis xthr plasmid l... 46 1.3 2
(CN106856) EC2CAA2BA05.b1 Xenopus tropicalis xthr plasmid li... 46 1.3 2
(CN106857) EC2CAA2BA05.g1 Xenopus tropicalis xthr plasmid li... 46 1.3 2
(FE113522) LV_HC_RA058J10f Litopenaeus vannamei hemocyte cDN... 34 1.3 4
(EW151464) reye1628b_h17.y1 eye Sus scrofa cDNA 5', mRNA seq... 36 1.3 2
(FK007823) GLMDZ69TFB JCVI-SOY2 Glycine max cDNA 5', mRNA se... 34 1.3 3
(FH558502) CHO_OF4477xg06r1.ab1 CHO_OF4 Nicotiana tabacum ge... 40 1.3 2
(EJ769049) 1092963364861 Global-Ocean-Sampling_GS-30-02-01-1... 42 1.3 2
(BI971962) sag84e09.y1 Gm-c1084 Glycine max cDNA clone GENOM... 34 1.3 3
(DQ356261) Homo sapiens isolate cftr14663_A cystic fibrosis ... 48 1.3 13
(CN096824) EC2CAA12AD02.g1 Xenopus tropicalis xthr plasmid l... 46 1.3 2
(CN113202) EC2CAA39DG03.g1 Xenopus tropicalis xthr plasmid l... 46 1.3 2
(DQ356259) Homo sapiens isolate cftr10975_A cystic fibrosis ... 48 1.4 13
(DQ388138) Homo sapiens isolate cftr11376_A cystic fibrosis ... 48 1.4 13
(GE021994) 454GmaGlobSeed764642 Soybean Seeds Containing Glo... 46 1.4 2
(DQ356262) Homo sapiens isolate cftr14663_B cystic fibrosis ... 48 1.4 13
(CN113826) EC2CAA40AD03.g1 Xenopus tropicalis xthr plasmid l... 46 1.4 2
(CN113786) EC2CAA40AB01.g1 Xenopus tropicalis xthr plasmid l... 46 1.4 2
(DQ388128) Homo sapiens isolate cftr10540_A cystic fibrosis ... 48 1.4 13
(CK681184) ZF101-P00024-DEPE-F2_F22 GISZF001_ra Danio rerio ... 40 1.4 2
(EB350779) CNSN01-F-146072-501 Normalized CNS library (juven... 42 1.4 3
(CT709969) Danio rerio EST, clone ZF_mu_185p15 5'. 40 1.5 2
(DQ388132) Homo sapiens isolate cftr10976_A cystic fibrosis ... 48 1.5 13
(BQ864703) QGC27G24.yg.ab1 QG_ABCDI lettuce salinas Lactuca ... 42 1.5 2
(GE364603) 292289832 Nasonia vitripennis Male Pupae Nasonia ... 46 1.5 2
(DQ388129) Homo sapiens isolate cftr10540_B cystic fibrosis ... 48 1.6 13
(DQ356263) Homo sapiens isolate cftr14672_A cystic fibrosis ... 48 1.6 13
(EK327633) 1095467012689 Global-Ocean-Sampling_GS-31-01-01-1... 38 1.6 2
(ER021418) 1095521428854 Global-Ocean-Sampling_GS-33-01-01-1... 34 1.6 2
(EB274374) CNSN01-F-091665-501 Normalized CNS library (juven... 42 1.6 3
(CJ485618) Macaca fascicularis mRNA, clone: QtsA-13211, 5' e... 34 1.6 4
(BC155267) Danio rerio Ran GTPase activating protein 1, mRNA... 40 1.6 3
(DQ388141) Homo sapiens isolate cftr11521_B cystic fibrosis ... 48 1.6 13
(CF922978) gmrhRww24-02-SP6_D11_1_089 Soybean root hair subt... 34 1.6 3
(DQ388143) Homo sapiens isolate cftr11589_B cystic fibrosis ... 48 1.6 13
(DQ356258) Homo sapiens isolate cftr10471_B cystic fibrosis ... 48 1.6 13
(DQ388142) Homo sapiens isolate cftr11589_A cystic fibrosis ... 48 1.6 13
(DQ354388) Homo sapiens isolate cftr14683_A cystic fibrosis ... 48 1.7 13
(AJ742207) Gallus gallus EST, clone 1j7r2. 34 1.7 3
(BW671186) Glycine max cDNA clone: GMFL01-32-O14, 5'end. 34 1.7 3
(DQ388133) Homo sapiens isolate cftr10976_B cystic fibrosis ... 48 1.7 13
(DQ388137) Homo sapiens isolate cftr11373_B cystic fibrosis ... 48 1.7 13
(GE366166) 292292840 Nasonia vitripennis Male Pupae Nasonia ... 46 1.7 2
(FE113356) LV_HC_RA058G04f Litopenaeus vannamei hemocyte cDN... 34 1.7 4
(CJ451739) Macaca fascicularis mRNA, clone: QflA-17361, 5' e... 46 1.7 2
(FM172216) Oryzias latipes EST, clone M080--B11_093. 32 1.7 4
(BE642232) Cri2_5_H24_SP6 Ceratopteris Spore Library Ceratop... 42 1.8 2
(EJ486600) 1095403504119 Global-Ocean-Sampling_GS-28-01-01-1... 42 1.8 2
(DR429393) nax16c10.y1 Chicken eye (embryo). Unnormalized (n... 34 1.8 3
(DQ388140) Homo sapiens isolate cftr11521_A cystic fibrosis ... 48 1.9 13
(EE716680) AGENCOURT_90081994 NIH_ZGC_28 Danio rerio cDNA cl... 40 1.9 2
(EJ771729) 1092969800764 Global-Ocean-Sampling_GS-30-02-01-1... 42 1.9 2
(CO803541) AGENCOURT_30349470 NIH_ZGC_5 Danio rerio cDNA clo... 40 1.9 2
(FD447308) frog_4057 Chinese forest frog skin cDNA library R... 34 1.9 3
(BJ549768) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 36 2.0 3
>(BJ351049) Dictyostelium discoideum cDNA clone:dda41j21, 3' end,
single read.
Length = 751
Score = 1328 bits (670), Expect(3) = 0.0
Identities = 670/670 (100%)
Strand = Plus / Minus
Query: 1378 ctattaaagaatccaaaactcatgtcaaatccaaccgaaggtggtatgtgtgaagtttta 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ctattaaagaatccaaaactcatgtcaaatccaaccgaaggtggtatgtgtgaagtttta 692
Query: 1438 tatgctgccgcttggattgttggtgagttctctggttatgtcaatcgtccaatagacgca 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tatgctgccgcttggattgttggtgagttctctggttatgtcaatcgtccaatagacgca 632
Query: 1498 ttggaagcattcttacaaccacgtgtttgtgtattaccatcacatattcaatcagtttac 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttggaagcattcttacaaccacgtgtttgtgtattaccatcacatattcaatcagtttac 572
Query: 1558 atgttaaattcattaaaagttttctctcatgcttgtgcaaaagcaaacggtgacaaaatc 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 atgttaaattcattaaaagttttctctcatgcttgtgcaaaagcaaacggtgacaaaatc 512
Query: 1618 ccatcattagacgatgatgatgaggaagaggaagcacaagaagaagaggaccaaaatgaa 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ccatcattagacgatgatgatgaggaagaggaagcacaagaagaagaggaccaaaatgaa 452
Query: 1678 atcactcatgaaatcgttcaagaatgtcttgaaattattaaatcacgtttaacaattttc 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 atcactcatgaaatcgttcaagaatgtcttgaaattattaaatcacgtttaacaattttc 392
Query: 1738 actcatagtatttacctaaatgtacaagaacgtgcttgtcttattaatgaattattatca 1797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 actcatagtatttacctaaatgtacaagaacgtgcttgtcttattaatgaattattatca 332
Query: 1798 ttctacacagtcactaaagaacaaggtaataatatttcaaaggagttaatttcattgttc 1857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ttctacacagtcactaaagaacaaggtaataatatttcaaaggagttaatttcattgttc 272
Query: 1858 acagaacaattaaatccagttggtccaaaagctcaaaagaaagtaccaattccagaaggt 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 acagaacaattaaatccagttggtccaaaagctcaaaagaaagtaccaattccagaaggt 212
Query: 1918 ttagatttagatgaatggattaatgatccaaaacatcaagaaccaattgaagaggatgaa 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ttagatttagatgaatggattaatgatccaaaacatcaagaaccaattgaagaggatgaa 152
Query: 1978 gatgatgatattttcaatacaagtacatctagtcatcaaaagaaacatcacaaacatcac 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gatgatgatattttcaatacaagtacatctagtcatcaaaagaaacatcacaaacatcac 92
Query: 2038 cgtggaggat 2047
||||||||||
Sbjct: 91 cgtggaggat 82
Score = 69.9 bits (35), Expect(3) = 0.0
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 2076 aaccaatagttctcattcaggtcattcaagtagta 2110
|||||||||||||||||||||||||||||||||||
Sbjct: 53 aaccaatagttctcattcaggtcattcaagtagta 19
Score = 38.2 bits (19), Expect(3) = 0.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 2111 atttcaatcgtcatccaat 2129
|||||||||||||||||||
Sbjct: 19 atttcaatcgtcatccaat 1
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 4,054,655,987
Number of extensions: 247861314
Number of successful extensions: 20658409
Number of sequences better than 10.0: 1065
Length of query: 3532
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 3507
Effective length of database: 96,311,147,814
Effective search space: 337763195383698
Effective search space used: 337763195383698
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
|
| protein update |
2009. 7.27 |
| Homology vs Protein |
Query= Contig-U16336-1 (Contig-U16336-1Q) /CSM_Contig/Contig-U16336-1Q.Seq.d
(3532 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC154680_1(BC154680|pid:none) Xenopus tropicalis adaptor-related... 532 e-149
FN357358_10(FN357358|pid:none) Schistosoma mansoni genome sequen... 413 e-147
(O54774) RecName: Full=AP-3 complex subunit delta-1; AltName: Fu... 526 e-147
AK155518_1(AK155518|pid:none) Mus musculus NOD-derived CD11c +ve... 524 e-147
BC005142_1(BC005142|pid:none) Homo sapiens adaptor-related prote... 523 e-146
BC080909_1(BC080909|pid:none) Xenopus tropicalis adaptor-related... 522 e-146
AC005545_3(AC005545|pid:none) Homo sapiens chromosome 19, cosmid... 522 e-146
AB384738_1(AB384738|pid:none) Synthetic construct DNA, clone: pF... 522 e-146
(O14617) RecName: Full=AP-3 complex subunit delta-1; AltName: Fu... 522 e-146
AK141789_1(AK141789|pid:none) Mus musculus 9 days embryo whole b... 520 e-145
BC037477_1(BC037477|pid:none) Mus musculus adaptor-related prote... 520 e-145
AB015979_1(AB015979|pid:none) Bos taurus mRNA for adaptor relate... 518 e-145
BC010065_1(BC010065|pid:none) Homo sapiens adaptor-related prote... 513 e-143
BT011188_1(BT011188|pid:none) Drosophila melanogaster RE06749 fu... 468 e-130
AF002164_1(AF002164|pid:none) Drosophila melanogaster AP-3 delta... 467 e-129
AE014298_2035(AE014298|pid:none) Drosophila melanogaster chromos... 467 e-129
AF130042_1(AF130042|pid:none) Homo sapiens clone FLB0124 PRO0039... 458 e-127
F88101(F88101)protein W09G10.4 [imported] - Caenorhabditis elegans 456 e-126
AF016671_5(AF016671|pid:none) Caenorhabditis elegans cosmid W09G... 456 e-126
AC135462_22(AC135462|pid:none) Medicago truncatula clone mth2-35... 282 e-105
AC073555_7(AC073555|pid:none) Arabidopsis thaliana chromosome 1 ... 283 e-103
AM920435_898(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 252 4e-94
U91930_1(U91930|pid:none) Homo sapiens AP-3 complex delta subuni... 345 7e-93
FN392319_1495(FN392319|pid:none) Pichia pastoris GS115 chromosom... 233 2e-88
AB261061_1(AB261061|pid:none) Entamoeba histolytica gene for del... 268 2e-86
AM502226_9(AM502226|pid:none) Leishmania infantum chromosome 8. 247 7e-85
CT005247_9(CT005247|pid:none) Leishmania major strain Friedlin, ... 247 1e-84
AP007160_1(AP007160|pid:none) Aspergillus oryzae RIB40 genomic D... 249 6e-84
CR380953_390(CR380953|pid:none) Candida glabrata strain CBS138 c... 217 9e-82
FM992690_247(FM992690|pid:none) Candida dubliniensis CD36 chromo... 201 3e-78
CU928180_193(CU928180|pid:none) Kluyveromyces thermotolerans str... 204 2e-76
CR382139_65(CR382139|pid:none) Debaryomyces hansenii strain CBS7... 185 8e-75
AC159455_21(AC159455|pid:none) Trypanosoma brucei chromosome 5 c... 279 6e-73
AF044287_1(AF044287|pid:none) Drosophila melanogaster delta adap... 270 3e-70
DQ167748_1(DQ167748|pid:none) Drosophila simulans putative AP-3 ... 260 2e-67
DQ167750_1(DQ167750|pid:none) Drosophila yakuba putative AP-3 de... 260 3e-67
DQ167747_1(DQ167747|pid:none) Drosophila orena putative AP-3 del... 260 3e-67
BT086119_1(BT086119|pid:none) Zea mays full-length cDNA clone ZM... 215 3e-66
BT055020_1(BT055020|pid:none) Zea mays full-length cDNA clone ZM... 215 3e-66
AP008207_1445(AP008207|pid:none) Oryza sativa (japonica cultivar... 213 5e-65
AM494945_9(AM494945|pid:none) Leishmania braziliensis chromosome... 248 1e-63
CR382132_5(CR382132|pid:none) Yarrowia lipolytica strain CLIB122... 247 2e-63
AF255316_1(AF255316|pid:none) Drosophila yakuba AP-3 delta-adapt... 236 4e-60
AF252686_1(AF252686|pid:none) Drosophila simulans strain sim8 AP... 236 6e-60
AE017345_99(AE017345|pid:none) Cryptococcus neoformans var. neof... 233 5e-59
AF252684_1(AF252684|pid:none) Drosophila simulans strain sim5 AP... 231 1e-58
U28742_2(U28742|pid:none) Caenorhabditis elegans cosmid T20B5, c... 112 9e-38
AK155825_1(AK155825|pid:none) Mus musculus B6-derived CD11 +ve d... 158 1e-36
AJ851566_1(AJ851566|pid:none) Gallus gallus mRNA for hypothetica... 99 2e-35
AP007172_52(AP007172|pid:none) Aspergillus oryzae RIB40 genomic ... 102 5e-35
AK088500_1(AK088500|pid:none) Mus musculus 2 days neonate thymus... 99 7e-34
(P18484) RecName: Full=AP-2 complex subunit alpha-2; AltName: Fu... 99 7e-34
AM270309_54(AM270309|pid:none) Aspergillus niger contig An14c001... 98 1e-33
AP002970_4(AP002970|pid:none) Oryza sativa Japonica Group genomi... 147 2e-33
BC122995_1(BC122995|pid:none) Xenopus tropicalis adaptor-related... 94 5e-33
BC067918_1(BC067918|pid:none) Xenopus tropicalis adaptor-related... 96 5e-33
CR848593_1(CR848593|pid:none) Xenopus tropicalis finished cDNA, ... 96 5e-33
AF289221_2(AF289221|pid:none) Homo sapiens alpha-adaptin A relat... 92 2e-32
(P17426) RecName: Full=AP-2 complex subunit alpha-1; AltName: Fu... 92 3e-32
AK223558_1(AK223558|pid:none) Homo sapiens mRNA for adaptor-rela... 96 4e-32
AM920428_660(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 97 5e-32
BC014214_1(BC014214|pid:none) Homo sapiens adaptor-related prote... 91 9e-32
CR857879_1(CR857879|pid:none) Pongo abelii mRNA; cDNA DKFZp459P0... 96 2e-31
AF329283_1(AF329283|pid:none) Calliphora vicina delta-adaptin-li... 139 6e-31
AY136369_1(AY136369|pid:none) Arabidopsis thaliana putative epsi... 102 6e-30
AC074360_5(AC074360|pid:none) Arabidopsis thaliana chromosome 1 ... 101 1e-29
AY099568_1(AY099568|pid:none) Arabidopsis thaliana alpha-adaptin... 92 2e-29
AK319011_1(AK319011|pid:none) Arabidopsis thaliana AT5G22770 mRN... 92 2e-29
AY099646_1(AY099646|pid:none) Arabidopsis thaliana alpha-adaptin... 91 4e-29
(Q86KI1) RecName: Full=AP-2 complex subunit alpha-2; AltName: Fu... 90 8e-29
AC069158_21(AC069158|pid:none) Genomic Sequence for Oryza sativa... 91 2e-28
BT067720_1(BT067720|pid:none) Zea mays full-length cDNA clone ZM... 103 4e-28
AE017341_195(AE017341|pid:none) Cryptococcus neoformans var. neo... 97 4e-28
AP008208_2858(AP008208|pid:none) Oryza sativa (japonica cultivar... 88 3e-27
AC174363_21(AC174363|pid:none) Medicago truncatula clone mth2-41... 91 6e-27
AB030653_1(AB030653|pid:none) Homo sapiens mRNA for epsilon-adap... 87 1e-26
(Q80V94) RecName: Full=AP-4 complex subunit epsilon-1; AltName: ... 89 1e-26
(Q9UPM8) RecName: Full=AP-4 complex subunit epsilon-1; AltName: ... 84 1e-25
AB006699_19(AB006699|pid:none) Arabidopsis thaliana genomic DNA,... 80 1e-25
AB024030_1(AB024030|pid:none) Arabidopsis thaliana genomic DNA, ... 78 4e-25
AB261056_1(AB261056|pid:none) Entamoeba histolytica gene for gam... 79 6e-25
FN392320_570(FN392320|pid:none) Pichia pastoris GS115 chromosome... 84 8e-25
CR749604_1(CR749604|pid:none) Homo sapiens mRNA; cDNA DKFZp686L1... 87 3e-24
CP000593_249(CP000593|pid:none) Ostreococcus lucimarinus CCE9901... 73 7e-24
(Q8I8U2) RecName: Full=AP-1 complex subunit gamma; AltName: Full... 115 9e-24
AK151844_1(AK151844|pid:none) Mus musculus bone marrow macrophag... 79 2e-23
AK147177_1(AK147177|pid:none) Mus musculus 16 days embryo kidney... 78 3e-23
(O75843) RecName: Full=AP-1 complex subunit gamma-like 2; AltNam... 77 2e-22
S49876(S49876) gamma-adaptin - smut fungus (Ustilago maydis) &Z... 110 3e-22
(Q99128) RecName: Full=AP-1 complex subunit gamma-1; AltName: Fu... 110 5e-22
AL928590_2(AL928590|pid:none) Mouse DNA sequence from clone RP23... 73 6e-22
AK039257_1(AK039257|pid:none) Mus musculus adult male spinal cor... 73 6e-22
AM494944_5(AM494944|pid:none) Leishmania braziliensis chromosome... 69 2e-21
CP001141_67(CP001141|pid:none) Phaeodactylum tricornutum CCAP 10... 71 3e-21
AY170465_1(AY170465|pid:none) Leishmania mexicana mexicana alpha... 65 5e-21
(Q54VE0) RecName: Full=AP-4 complex subunit epsilon; AltName: Fu... 75 2e-19
CP001330_100(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 101 2e-19
AM269955_67(AM269955|pid:none) Aspergillus niger contig An01c008... 100 4e-19
CR548612_406(CR548612|pid:none) Paramecium tetraurelia macronucl... 99 9e-19
AM920428_179(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 99 1e-18
(O43747) RecName: Full=AP-1 complex subunit gamma-1; AltName: Fu... 98 2e-18
(P22892) RecName: Full=AP-1 complex subunit gamma-1; AltName: Fu... 98 2e-18
CR382134_483(CR382134|pid:none) Debaryomyces hansenii strain CBS... 97 3e-18
(Q5R5M2) RecName: Full=AP-1 complex subunit gamma-1; AltName: Fu... 97 6e-18
BC047823_1(BC047823|pid:none) Danio rerio adaptor-related protei... 96 7e-18
(Q7QG73) RecName: Full=AP-2 complex subunit alpha; AltName: Full... 96 7e-18
CR382128_855(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 96 9e-18
FM992695_250(FM992695|pid:none) Candida dubliniensis CD36 chromo... 96 9e-18
BC036283_1(BC036283|pid:none) Homo sapiens adaptor-related prote... 95 2e-17
AK036387_1(AK036387|pid:none) Mus musculus adult male bone cDNA,... 95 2e-17
AK145821_1(AK145821|pid:none) Mus musculus 14 days pregnant adul... 95 2e-17
Y12226_1(Y12226|pid:none) H.sapiens mRNA for gamma-adaptin. 95 2e-17
AE014298_1328(AE014298|pid:none) Drosophila melanogaster chromos... 95 2e-17
BT023757_1(BT023757|pid:none) Drosophila melanogaster RE56180 fu... 95 2e-17
BC045070_1(BC045070|pid:none) Xenopus laevis similar to adaptor ... 93 8e-17
BC073198_1(BC073198|pid:none) Xenopus laevis similar to adaptor ... 93 8e-17
AC006942_1(AC006942|pid:none) Homo sapiens chromosome 19, cosmid... 92 1e-16
AE014134_101(AE014134|pid:none) Drosophila melanogaster chromoso... 92 1e-16
(P91926) RecName: Full=AP-2 complex subunit alpha; AltName: Full... 92 1e-16
AC084047_34(AC084047|pid:none) Trypanosoma brucei chromosome 6 c... 78 3e-16
CP000497_69(CP000497|pid:none) Pichia stipitis CBS 6054 chromoso... 89 9e-16
AK293233_1(AK293233|pid:none) Homo sapiens cDNA FLJ55047 complet... 89 1e-15
(Q29N38) RecName: Full=AP-2 complex subunit alpha; AltName: Full... 89 1e-15
BC135628_1(BC135628|pid:none) Xenopus tropicalis adaptor-related... 87 4e-15
CR382125_286(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 86 7e-15
CP000584_399(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 86 1e-14
EU956640_1(EU956640|pid:none) Zea mays clone 1568667 AP-1 comple... 86 1e-14
AM494957_360(AM494957|pid:none) Leishmania braziliensis chromoso... 60 3e-14
CT005271_415(CT005271|pid:none) Leishmania major strain Friedlin... 62 3e-14
HB446708_1(HB446708|pid:none) Sequence 131 from Patent EP2078753. 84 5e-14
AB261057_1(AB261057|pid:none) Entamoeba histolytica gene for gam... 65 1e-13
CR954213_269(CR954213|pid:none) Ostreococcus tauri strain OTTH05... 73 1e-13
AC005966_12(AC005966|pid:none) Arabidopsis thaliana chromosome 1... 80 5e-13
EU481389_1(EU481389|pid:none) Caenorhabditis remanei strain PB20... 79 1e-12
AJ133777_1(AJ133777|pid:none) Arabidopsis thaliana mRNA for gamm... 79 2e-12
BT004307_1(BT004307|pid:none) Arabidopsis thaliana clone RAFL16-... 79 2e-12
AE014187_527(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 79 2e-12
AC002423_7(AC002423|pid:none) Genomic sequence for Arabidopsis t... 79 2e-12
CR760468_1(CR760468|pid:none) Xenopus tropicalis finished cDNA, ... 77 5e-12
AB261058_1(AB261058|pid:none) Entamoeba histolytica gene for alp... 74 3e-11
BT025356_1(BT025356|pid:none) Bos taurus adaptor-related protein... 73 7e-11
CP000500_55(CP000500|pid:none) Pichia stipitis CBS 6054 chromoso... 72 1e-10
BC149792_1(BC149792|pid:none) Bos taurus adaptor-related protein... 72 1e-10
CR954204_430(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 70 4e-10
AK001986_1(AK001986|pid:none) Homo sapiens cDNA FLJ11124 fis, cl... 69 9e-10
AB173339_1(AB173339|pid:none) Macaca fascicularis brain cDNA clo... 69 9e-10
CR940353_184(CR940353|pid:none) Theileria annulata strain Ankara... 64 5e-08
AY812014_1(AY812014|pid:none) Schistosoma japonicum SJCHGC04224 ... 62 1e-07
AF049527_1(AF049527|pid:none) Homo sapiens alpha-adaptin C mRNA,... 62 2e-07
AB004535_18(AB004535|pid:none) Schizosaccharomyces pombe 42.8 kb... 61 3e-07
FM992688_697(FM992688|pid:none) Candida dubliniensis CD36 chromo... 61 3e-07
FM992690_232(FM992690|pid:none) Candida dubliniensis CD36 chromo... 55 3e-07
AY810338_1(AY810338|pid:none) Schistosoma japonicum SJCHGC05448 ... 60 4e-07
EU020994_1(EU020994|pid:none) Cydia pomonella clone Cpo63f2 puta... 49 5e-07
FN392320_526(FN392320|pid:none) Pichia pastoris GS115 chromosome... 60 7e-07
AK297290_1(AK297290|pid:none) Homo sapiens cDNA FLJ60689 complet... 59 1e-06
DQ084053_1(DQ084053|pid:none) Oxyuranus scutellatus adaptor-rela... 59 2e-06
AM502252_354(AM502252|pid:none) Leishmania infantum chromosome 34. 59 2e-06
AY810194_1(AY810194|pid:none) Schistosoma japonicum SJCHGC08301 ... 58 2e-06
BC086368_1(BC086368|pid:none) Rattus norvegicus adaptor-related ... 57 4e-06
(Q03368) RecName: Full=Bovine leukemia virus cell receptor; ... 57 4e-06
M98430_1(M98430|pid:none) Bos taurus leukemia virus cell recepto... 57 4e-06
AK293763_1(AK293763|pid:none) Homo sapiens cDNA FLJ57955 complet... 57 5e-06
AL929354_39(AL929354|pid:none) Plasmodium falciparum strain 3D7,... 40 6e-06
AF294802_1(AF294802|pid:none) Bos taurus bovine leukemia virus r... 57 6e-06
AF294797_1(AF294797|pid:none) Bos taurus bovine leukemia virus r... 57 6e-06
AF294803_1(AF294803|pid:none) Bos taurus bovine leukemia virus r... 57 6e-06
AK075497_1(AK075497|pid:none) Homo sapiens cDNA PSEC0195 fis, cl... 56 1e-05
AK294546_1(AK294546|pid:none) Homo sapiens cDNA FLJ52990 complet... 55 2e-05
AF294799_1(AF294799|pid:none) Bos taurus bovine leukemia virus r... 54 3e-05
AF006990_1(AF006990|pid:none) Mus musculus alpha-adaptin C mRNA,... 54 4e-05
CR382138_1212(CR382138|pid:none) Debaryomyces hansenii chromosom... 54 4e-05
AB171425_1(AB171425|pid:none) Macaca fascicularis brain cDNA clo... 54 5e-05
AK094460_1(AK094460|pid:none) Homo sapiens cDNA FLJ37141 fis, cl... 53 7e-05
CU928169_449(CU928169|pid:none) Kluyveromyces thermotolerans str... 53 9e-05
EU020980_1(EU020980|pid:none) Forficula auricularia clone Fau63f... 52 1e-04
AF486294_1(AF486294|pid:none) Giardia intestinalis gamma adaptin... 52 1e-04
CR382138_832(CR382138|pid:none) Debaryomyces hansenii strain CBS... 52 1e-04
AJ224112_1(AJ224112|pid:none) Homo sapiens gamma-adaptin gene, e... 52 2e-04
EU020993_1(EU020993|pid:none) Antheraea paukstadtorum clone Apau... 52 2e-04
EU020995_1(EU020995|pid:none) Prodoxus quinquepunctellus clone P... 52 2e-04
EU020989_1(EU020989|pid:none) Speleonectes tulumensis clone Stu6... 51 3e-04
EU020981_1(EU020981|pid:none) Lithobius forticatus clone Lfo63f2... 51 3e-04
EU020986_1(EU020986|pid:none) Nebalia hessleri clone Nhe63f2 put... 51 3e-04
AB261062_1(AB261062|pid:none) Entamoeba histolytica gene for eps... 51 3e-04
AM910992_42(AM910992|pid:none) Plasmodium knowlesi strain H chro... 40 6e-04
AC002423_12(AC002423|pid:none) Genomic sequence for Arabidopsis ... 49 0.001
AL080283_6(AL080283|pid:none) Arabidopsis thaliana DNA chromosom... 49 0.001
(Q9SV20) RecName: Full=Coatomer subunit beta-2; AltName: Full=Be... 49 0.001
AM910983_101(AM910983|pid:none) Plasmodium knowlesi strain H chr... 49 0.001
EU020982_1(EU020982|pid:none) Limulus polyphemus clone Lpo63f2 p... 48 0.002
(Q23924) RecName: Full=Coatomer subunit beta; AltName: Full=Beta... 48 0.002
(P41810) RecName: Full=Coatomer subunit beta; AltName: Full=Beta... 48 0.002
U11236_1(U11236|pid:none) Saccharomyces cerevisiae beta COP (sec... 48 0.002
(Q9SV21) RecName: Full=Coatomer subunit beta-1; AltName: Full=Be... 48 0.003
EU020985_1(EU020985|pid:none) Narceus americanus clone Nam63f2 p... 47 0.004
CR380957_471(CR380957|pid:none) Candida glabrata strain CBS138 c... 47 0.005
AP002862_22(AP002862|pid:none) Oryza sativa Japonica Group genom... 47 0.007
CP000502_178(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 46 0.011
BT070792_1(BT070792|pid:none) Picea sitchensis clone WS02750_E10... 46 0.011
CP000742_953(CP000742|pid:none) Methanococcus vannielii SB, comp... 46 0.011
EU020987_1(EU020987|pid:none) Cypridopsis vidua clone Ost63f2 pu... 45 0.019
AB080596_1(AB080596|pid:none) Botryococcus braunii bCOP mRNA for... 45 0.019
BX538351_19(BX538351|pid:none) Cryptosporidium parvum chromosome... 45 0.025
CR382123_662(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 45 0.025
CT005259_134(CT005259|pid:none) Leishmania major strain Friedlin... 44 0.032
EU020984_1(EU020984|pid:none) Mastigoproctus giganteus clone Mga... 44 0.055
AF486293_1(AF486293|pid:none) Giardia intestinalis alpha adaptin... 43 0.072
EU020990_1(EU020990|pid:none) Thulinius stephaniae clone Thul63f... 42 0.16
CP001325_660(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 42 0.16
FN357297_14(FN357297|pid:none) Schistosoma mansoni genome sequen... 42 0.21
AE017347_289(AE017347|pid:none) Cryptococcus neoformans var. neo... 42 0.21
CR382132_796(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 41 0.27
BX950229_1665(BX950229|pid:none) Methanococcus maripaludis strai... 40 0.47
AP008217_366(AP008217|pid:none) Oryza sativa (japonica cultivar-... 40 0.47
EU074677_1(EU074677|pid:none) Capra hircus adaptor-related prote... 40 0.47
(Q53PC7) RecName: Full=Coatomer subunit beta-1; AltName: Full=Be... 40 0.47
(Q54R84) RecName: Full=AP-4 complex subunit beta; AltName: Full=... 39 1.0
CU928169_623(CU928169|pid:none) Kluyveromyces thermotolerans str... 38 2.3
FN314202_1(FN314202|pid:none) Schistosoma japonicum isolate Anhu... 38 2.3
CP000867_997(CP000867|pid:none) Methanococcus maripaludis C6, co... 38 2.3
AB263748_49(AB263748|pid:none) Ipomoea trifida DNA, self-incompa... 38 3.0
AE009950_342(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co... 37 4.0
AJ248285_5(AJ248285|pid:none) Pyrococcus abyssi complete genome;... 37 4.0
AX886860_1(AX886860|pid:none) Sequence 2723 from Patent EP1033401. 37 5.2
AM270026_72(AM270026|pid:none) Aspergillus niger contig An02c031... 37 5.2
AE014299_4124(AE014299|pid:none) Shewanella oneidensis MR-1, com... 37 5.2
CU207366_24(CU207366|pid:none) Gramella forsetii KT0803 complete... 37 6.8
FM992690_487(FM992690|pid:none) Candida dubliniensis CD36 chromo... 37 6.8
CR382126_101(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 36 8.8
>BC154680_1(BC154680|pid:none) Xenopus tropicalis adaptor-related
protein complex 3, delta 1 subunit, mRNA (cDNA clone
IMAGE:7680087), partial cds.
Length = 886
Score = 532 bits (1370), Expect = e-149
Identities = 320/766 (41%), Positives = 442/766 (57%), Gaps = 53/766 (6%)
Frame = +1
Query: 427 FVQPDLARELANDILTLLSTQKTHILKRAITVLYKIFLRYPESLRPAFPKLREKLDDPEP 606
FV PDLAR+LANDI+TL+S K +I K+A+ ++YK+FL+YPESLRPAFP+L+EKL+DP+P
Sbjct: 138 FVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPAFPRLKEKLEDPDP 197
Query: 607 SVVSCSVNVICELARRNPKNYLPLAPVLFRILTNTTNNYWMLIKIVKLFAALTPHEPRLG 786
V S +VNVICELARRNPKNYL LAP+ F+++T++TNN W+LIKI+KLF ALTP EPRLG
Sbjct: 198 GVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNN-WVLIKIIKLFGALTPLEPRLG 256
Query: 787 KKLIDPLTNIINSSPSVSLLYECIQTCI-------TGMSDHIPLMKLCISKLRTLIEHND 945
KKLI+PLTN+I+S+ ++SLLYEC+ T I +GM +H ++LC+ KLR LIE +D
Sbjct: 257 KKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSD 316
Query: 946 QNLKYLGLLALNNIMKIHPKAVSEHRDLVLNCLEDDDISIRLRALDLLPGMTSKKNIGDI 1125
QNLKYLGLLA++ I+K HPK+V H+DL+L CL+D D SIRLRALDLL GM SKKN+ +I
Sbjct: 317 QNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNLMEI 376
Query: 1126 VFKLLDHLDNAXXXXXXXXXXXXXX-LCSMGTYQFITDFEWYINILVKLSQIQDSIHGKL 1302
V KL+ H+D A +CS YQ+IT+FEWYI+ILV+L++++ + HG L
Sbjct: 377 VKKLMIHVDKAEGTAYRDELLTKIIDICSQSNYQYITNFEWYISILVELTRLEGTRHGHL 436
Query: 1303 IASQLLDVVIRVKIVRAYSTRQMIELLKNPKLM-SNPTEGGMCEVLYAAAWIVGEFSGYV 1479
IA+Q+LDV IRVK +R ++ QM LL N L+ SN G+CEVLYAAAWI GEFS ++
Sbjct: 437 IAAQMLDVAIRVKAIRRFAVSQMATLLDNAHLLASNTQRNGICEVLYAAAWICGEFSEHL 496
Query: 1480 NRPIDALEAFLQPRVCVLPSHIQSVYMLNSLKVFSHACAKANGDKIPSLXXXXXXXXXXX 1659
P LEA L+P+V LP HIQ+VY+ N +K++S C + ++
Sbjct: 497 LEPNQTLEAMLRPKVTTLPGHIQAVYVQNVVKLYS--CILQSKEQAGD------------ 542
Query: 1660 XXXXXXITHEIVQECLEIIKSRLTIFTHSIYLNVQERACLINELLSFYTVTKEQGNNISK 1839
E QE +++ RL F S L VQERA I +L+ + + + +++
Sbjct: 543 --------QEAAQEITQLMIDRLPQFVQSADLEVQERASCILQLIKYIQKLQSKEVPVAE 594
Query: 1840 ELISLFTEQLNPVGPKAQKKVPIPEGLDLDEWINDPKHQXXXXXXXXXXXFNXXXXXXXX 2019
E+++LF +LNPV PKAQKKVP+PEGLDL+ WIN+P F
Sbjct: 595 EVMALFAGELNPVAPKAQKKVPVPEGLDLEAWINEPPSDSESEEEKPKAIFQ-------- 646
Query: 2020 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFNRHPID---IQRQKEERLRKQANNPYML 2190
+R ID + R++ R +QANNP+ +
Sbjct: 647 -----------------------DEKQSHGKTSRPEIDEEELARRRAARKEEQANNPFYI 683
Query: 2191 GGKVS-KKLSTNDP--ENIPVVQLTGD---------LGHLHVGASSNRPMPSKGSK---- 2322
S +KL + P E+IPVVQ+ + +V R + K
Sbjct: 684 KASPSPQKLYQDSPGVEHIPVVQIDLSVPLKVPGLPISDQYVKLEEERRSKQRQEKDKKK 743
Query: 2323 ---------KTKKHYTIDT---------------TTEMPEGAXXXXXXXXXXXXXXXXAL 2430
KT++H+++ T T EMPE A
Sbjct: 744 KKEKDKKGSKTRRHHSLHTESDEDITPAHHVDIITEEMPENALPSDEDDKDPNDPYRAL- 802
Query: 2431 SNINLSEPLTASDVLHTSRHR-TDIIKEKEREMAMLAKKNAKLSPK 2565
+I+L +PL ++ L RHR +I+K E E +K K+S K
Sbjct: 803 -DIDLDKPLADTEKLPVQRHRNAEILKSPENETPTSDQKIKKMSKK 847
Score = 157 bits (397), Expect = 3e-36
Identities = 85/181 (46%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Frame = +3
Query: 51 KMFERTLVDLIRGIRNHKKNETKFINQCINEIKEELKGD-MQKKTVAVQKLTYIQMLGFD 227
+MF++ L DL+RGIRNHK++E K+I+ CI+EIK+ELK D + K AV KLTY+QMLG+D
Sbjct: 12 RMFDKNLQDLVRGIRNHKEDEAKYISHCIDEIKQELKQDNIAVKANAVCKLTYLQMLGYD 71
Query: 228 ISWASFKIVEVMSCNKFSSKRIGYLAASQSFNEGTDVIVLATHQIRKDFLSSNQSEAYLA 407
ISWA+F I+EVMS +KF+ KRIGYLAASQ F+E TDVI+L T+QIRKD S NQ + +A
Sbjct: 72 ISWAAFNIIEVMSASKFTFKRIGYLAASQCFHEATDVIMLTTNQIRKDLSSPNQYDTGVA 131
Query: 408 LNCLSNICTTRFSKRVGK*YPNIIEYTKNTYFKESHHGVI*DILEISRIAKTSIPKVKRE 587
L LS T ++ + ++ +TK K++ + L+ + + P++K +
Sbjct: 132 LTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPAFPRLKEK 191
Query: 588 I 590
+
Sbjct: 192 L 192
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 5,217,747,840
Number of extensions: 100066038
Number of successful extensions: 264249
Number of sequences better than 10.0: 230
Number of HSP's gapped: 263839
Number of HSP's successfully gapped: 398
Length of query: 1177
Length of database: 1,061,185,681
Length adjustment: 140
Effective length of query: 1037
Effective length of database: 603,602,961
Effective search space: 625936270557
Effective search space used: 625936270557
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
13 |
| VF (FL, S) |
0 |
| AH (FL, L) |
21 |
| AF (FL, S) |
2 |
| SL (DIR, L) |
1 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
12 |
| SF (FL, S) |
1 |
| CH (FL, L) |
8 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |