NC_006624
Chromosome NC_006624
Query gi|57640470
Alignment
>1ud9A 3 244 5 247 2e-55
dbj|BAD84724.1| DNA polymerase sliding clamp [Thermococcus kodakaraensis KOD1]
ref|YP_182948.1| DNA polymerase sliding clamp
[Thermococcus kodakaraensis KOD1]
Length = 243



Score = 288 bits (1083), Expect = 3e-77
Identities = 215/243 (88%), Positives = 215/243 (88%)

Query: 5 VVFDGAKEFADLIATASNLIDEAAFKFTEEGISMRAMDPSRVVLIDLNLPESIFSKYEVE 64
VVFDGAKEFADLIATASNLIDEAAFKFTEEGISMRAMDPSRVVLIDLNLPESIFSKYEVE
Sbjct: 1 VVFDGAKEFADLIATASNLIDEAAFKFTEEGISMRAMDPSRVVLIDLNLPESIFSKYEVE 60

Query: 65 EPETIGINMDQFKKILKRGKAKDTLILRKGDENFLEITFEGTAKRTFRLPLIDVXXXXXX 124
EPETIGINMDQFKKILKRGKAKDTLILRKGDENFLEITFEGTAKRTFRLPLIDV
Sbjct: 61 EPETIGINMDQFKKILKRGKAKDTLILRKGDENFLEITFEGTAKRTFRLPLIDVEELELE 120

Query: 125 XXXXXFTAKVVLLGEVLKEGIKDASLVSDAIKFIAKENEFTMKAEGETNEVEIRXXXXXX 184
FTAKVVLLGEVLKEGIKDASLVSDAIKFIAKENEFTMKAEGETNEVEIR
Sbjct: 121 LPELPFTAKVVLLGEVLKEGIKDASLVSDAIKFIAKENEFTMKAEGETNEVEIRLTLEDE 180

Query: 185 XXXXXXXXXXXKSAYGIRYLSDMVKGIGKADEVILRFGNEMPLQMEYMIRDEGRLTFLLA 244
KSAYGIRYLSDMVKGIGKADEVILRFGNEMPLQMEYMIRDEGRLTFLLA
Sbjct: 181 GLLDLEVEEETKSAYGIRYLSDMVKGIGKADEVILRFGNEMPLQMEYMIRDEGRLTFLLA 240

Query: 245 PRV 247
PRV
Sbjct: 241 PRV 243