NC_002162
Chromosome NC_002162
Query gi|13357670
Alignment
>1vioA 2 230 16 288 4e-16
ref|NP_077944.1| pseudouridine synthase (uracil hydrolase) [Ureaplasma parvum
serovar 3 str. ATCC 700970] gb|AAF30519.1| pseudouridine
synthase (uracil hydrolase) [Ureaplasma parvum serovar 3
str. ATCC 700970] pir||C82933 pseudouridine synthase
(uracil hydrolase) UU113 [imported] - Ureaplasma
urealyticum
Length = 273



Score = 305 bits (1149), Expect = 3e-82
Identities = 239/273 (87%), Positives = 239/273 (87%)

Query: 16 RLDRFLLKNFPNLSRIAVYKIIRTXXXXXXXXXXXXXYLLKENDVVSIYAKENFLEKKVD 75
RLDRFLLKNFPNLSRIAVYKIIRT YLLKENDVVSIYAKENFLEKKVD
Sbjct: 1 RLDRFLLKNFPNLSRIAVYKIIRTKDVKVNHKKVDHNYLLKENDVVSIYAKENFLEKKVD 60

Query: 76 LSFANAKDELDIIYEDKNILVVHKPIGLIVHEDNRYKNDTLQNRIKKYLVKKDEYHPFDE 135
LSFANAKDELDIIYEDKNILVVHKPIGLIVHEDNRYKNDTLQNRIKKYLVKKDEYHPFDE
Sbjct: 61 LSFANAKDELDIIYEDKNILVVHKPIGLIVHEDNRYKNDTLQNRIKKYLVKKDEYHPFDE 120

Query: 136 SAFVPSLCHRLDLNTSGLIVAAKTANALRVITEMFKNNDVIRIYKCLTYNQLPKNNDVIY 195
SAFVPSLCHRLDLNTSGLIVAAKTANALRVITEMFKNNDVIRIYKCLTYNQLPKNNDVIY
Sbjct: 121 SAFVPSLCHRLDLNTSGLIVAAKTANALRVITEMFKNNDVIRIYKCLTYNQLPKNNDVIY 180

Query: 196 NFMYKADDNTMIVQNFKTKFNXXXXXXXXXXXXXXXXXXXXXELLTGRTHQIRAVLNFLH 255
NFMYKADDNTMIVQNFKTKFN ELLTGRTHQIRAVLNFLH
Sbjct: 181 NFMYKADDNTMIVQNFKTKFNKTAITKYTYIDKYKKYFIYDIELLTGRTHQIRAVLNFLH 240

Query: 256 APIVGEQKYITKDIDKNQNYMYQCLVSYKIKFI 288
APIVGEQKYITKDIDKNQNYMYQCLVSYKIKFI
Sbjct: 241 APIVGEQKYITKDIDKNQNYMYQCLVSYKIKFI 273