NC_003551
Chromosome NC_003551
Query gi|20093993
Alignment
>1t9iB 13 153 2 144 3e-22
emb|CAD89234.1| putative homing endonuclease [Thermotoga subterranea]
Length = 143



Score = 48.4 bits (165), Expect = 2e-05
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 5/117 (4%)

Query: 17 AGFFDGEGSVVVRFVRDGRYRAGYRVSTKVVFVQKERDVLEEIHETLGMGHLYRRGSDGV 76
AGF DGEGS +V + Y++G+++S K++ VL L G L +R DGV
Sbjct: 1 AGFADGEGSFMVVVRKKDDYKSGWKISVAFNVSNKDKVVLALFKRYLNCGTLRQR-KDGV 59

Query: 77 WYLEIYR----REDLREFVELIGNRTMVKRDALERLATVLELLEGGVHGSRDGLERI 129
WY E+ E++ F + + KR++ ++ V+E++ H +++G+E+I
Sbjct: 60 WYYEVGNFNAIVENVIPFFDRFRFLSAAKRNSYSKFKKVVEIIGRSEHTTKEGIEKI 116