NC_002927
Chromosome NC_002927
Query gi|33599078
Alignment
>1us5A 3 258 37 285 1e-06
ref|NP_888272.1| hypothetical protein BB1727 [Bordetella bronchiseptica RB50]
emb|CAE32224.1| putative exported protein [Bordetella
bronchiseptica RB50]
Length = 249



Score = 167 bits (620), Expect = 1e-40
Identities = 106/249 (42%), Positives = 156/249 (62%), Gaps = 2/249 (0%)

Query: 32 RPVRLIVPYGAGGAADVLARIMAEKLSAIWKQPVIVENKPGGVGTIGIMATVQAEPDGYT 91
+PVR++V + AGG DV+ARIMA++L+ Q +VENKPGG I +A PDGYT
Sbjct: 1 KPVRIVVGFSAGGTTDVIARIMAKELTEALGQSFVVENKPGGGSNIATDYVARATPDGYT 60

Query: 92 LVSVPVSDLAVNPHLYRKRPFDVRKDLAPVSQVGAVPNVLLVSNALEVGDVQALVARAAA 151
L+ V V+ A+N LY+ FD+ KD+APV+ VPN+L+++ ++ V VQ LVA A A
Sbjct: 61 LLFVAVTS-AINQTLYKNVNFDLTKDFAPVALGAKVPNILVLNPSVPVKSVQELVAYAKA 119

Query: 152 KPGYLTYSSPGVGSQAHIAAEMFAMRAGLSLQHIPYNSVPAALTDVAGGQIDMMFAQLPA 211
PG L ++S G G+ H+A E+F RAG+ + H+PY A+TD+ GGQ+ MF +P+
Sbjct: 120 NPGKLAFASSGSGTSIHMAGELFKQRAGIDVLHVPYKGSAPAVTDLIGGQVQFMFDNMPS 179

Query: 212 VLPFVKSGRVKVLAVAADARTPLLPDLPTLGEVGGPSIGDAISWSAVMAPAGTPLALREK 271
P V++G+++ LAV R+ PDLPT+ E G + D SW ++APAGTP +
Sbjct: 180 SWPHVQAGKLRALAVTTTERSASAPDLPTMKESGFENF-DVSSWFGLIAPAGTPPEVVNT 238

Query: 272 IAAGIASAI 280
+ A + A+
Sbjct: 239 LNAAMVKAL 247