NC_005835
Chromosome NC_005835
Query gi|46199213
Alignment
>1v9mA 1 319 5 323 e-105
ref|YP_144541.1| V-type ATP synthase subunit [Thermus thermophilus HB8]
dbj|BAA09871.1| vacuolar type ATP synthase subunit
[Thermus thermophilus] sp|P74902|VATC_THET8 V-type ATP
synthase subunit C (V-type ATPase subunit C)
dbj|BAD71098.1| V-type ATP synthase subunit [Thermus
thermophilus HB8] pdb|1V9M|A Chain A, Crystal Structure
Of The C Subunit Of V-Type Atpase From Thermus
Thermophilus pdb|1R5Z|C Chain C, Crystal Structure Of
Subunit C Of V-Atpase pdb|1R5Z|B Chain B, Crystal
Structure Of Subunit C Of V-Atpase pdb|1R5Z|A Chain A,
Crystal Structure Of Subunit C Of V-Atpase
Length = 319



Score = 396 bits (1497), Expect = e-109
Identities = 286/319 (89%), Positives = 287/319 (89%)

Query: 5 FAYLNARVRVRRGTLLKESFFQEALDLSFADFLRLLSETVYGGELAGQGLPDVDRAVLRT 64
FAYLNARVRVRRGTLLKESFFQEALDLSFADFLRLLSETVYGGELAGQGLPDVDRAVLRT
Sbjct: 1 FAYLNARVRVRRGTLLKESFFQEALDLSFADFLRLLSETVYGGELAGQGLPDVDRAVLRT 60

Query: 65 QAKLVGDLPRLVTGEAREAVXXXXXXXXXXXXXXXXRAKATGRPFEEVLLLPGTLREEVW 124
QAKLVGDLPRLVTGEAREAV RAKATGRPFEEVLLLPGTLREEVW
Sbjct: 61 QAKLVGDLPRLVTGEAREAVRLLLLRNDLHNLQALLRAKATGRPFEEVLLLPGTLREEVW 120

Query: 125 RQAYEAQDPAGMAQVLAVPGHPLARALRAVLRETQDLARVEALLAKRFFEDVAKAAKGLD 184
RQAYEAQDPAGMAQVLAVPGHPLARALRAVLRETQDLARVEALLAKRFFEDVAKAAKGLD
Sbjct: 121 RQAYEAQDPAGMAQVLAVPGHPLARALRAVLRETQDLARVEALLAKRFFEDVAKAAKGLD 180

Query: 185 QPALRDYLALEVDAENLRTAFKLQGSGLAPDAFFLKGGRFVDRVRFARLMEGDYAVLDEL 244
QPALRDYLALEVDAENLRTAFKLQGSGLAPDAFFLKGGRFVDRVRFARLMEGDYAVLDEL
Sbjct: 181 QPALRDYLALEVDAENLRTAFKLQGSGLAPDAFFLKGGRFVDRVRFARLMEGDYAVLDEL 240

Query: 245 SGTPFSGLSGVRDLRALERGLRCVLLKEAKKGVQDPLGVGLVLAYVKXXXXXXXXXXXXX 304
SGTPFSGLSGVRDL+ALERGLRCVLLKEAKKGVQDPLGVGLVLAYVK
Sbjct: 241 SGTPFSGLSGVRDLKALERGLRCVLLKEAKKGVQDPLGVGLVLAYVKEREWEAVRLRLLA 300

Query: 305 XXXYFGLPRAQVEEEVVCP 323
YFGLPRAQVEEEVVCP
Sbjct: 301 RRAYFGLPRAQVEEEVVCP 319