>1twfC 4 266 7 270 1e-81
ref|NP_477419.1| CG7885-PA, isoform A [Drosophila melanogaster] gb|AAF53342.1|
CG7885-PA, isoform A [Drosophila melanogaster]
gb|AAF44826.1| symbol=RpII33; synonym=BG:DS00941.10;
cDNA=method:''sim4'', score:''1000.0'', desc:''LD09978
LD Drosophila melanogaster embryo BlueScript Drosophila
melanogaster cDNA clone LD09978 full-length mRNA
sequence from BDGP''; match=method:''BLASTX'',
version:''2.0a19MP-WashU [05-Feb-1998] [Build
sol2.5-ultra 01:47:30 05-Feb-1998]'', score:''1077.0'',
desc:''trEMBL::O15161:RNA POLYMERASE II SUBUNIT HRPB33.
organism:HOMO SAPIENS (HUMAN). dbxref:GenBank; AF008443;
g2266931; -. PROSITE; PS00446; RNA_POL_D_30KD; 1.'>
gb|AAL28192.1| GH07456p [Drosophila melanogaster]
emb|CAB38635.1| RNA polymerase II p33 subunit
[Drosophila melanogaster]
Length = 264



Score = 425 bits (1608), Expect = e-118
Identities = 264/264 (100%), Positives = 264/264 (100%)

Query: 7 PSVQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLSDEFLAH 66
PSVQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLSDEFLAH
Sbjct: 1 PSVQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLSDEFLAH 60

Query: 67 RIGLIPLISDDVVERLQYTRDCICLDFCPECSVEFTLDVKCSEEQTRHVTTADLKSSNAK 126
RIGLIPLISDDVVERLQYTRDCICLDFCPECSVEFTLDVKCSEEQTRHVTTADLKSSNAK
Sbjct: 61 RIGLIPLISDDVVERLQYTRDCICLDFCPECSVEFTLDVKCSEEQTRHVTTADLKSSNAK 120

Query: 127 VLPVTSRNQGEEDNEYGESNDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTAGVCFE 186
VLPVTSRNQGEEDNEYGESNDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTAGVCFE
Sbjct: 121 VLPVTSRNQGEEDNEYGESNDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTAGVCFE 180

Query: 187 YDPDNSMRHTLYPKPDEWPKSEHTELEDDQYEAPYNWEAKPNKFFFNVESAGALKPENIV 246
YDPDNSMRHTLYPKPDEWPKSEHTELEDDQYEAPYNWEAKPNKFFFNVESAGALKPENIV
Sbjct: 181 YDPDNSMRHTLYPKPDEWPKSEHTELEDDQYEAPYNWEAKPNKFFFNVESAGALKPENIV 240

Query: 247 VMGVQVLKNKLSNLQTQLSHESQN 270
VMGVQVLKNKLSNLQTQLSHESQN
Sbjct: 241 VMGVQVLKNKLSNLQTQLSHESQN 264