NC_003098
Chromosome NC_003098
Query gi|15902282
Alignment
>1in4A 3 311 20 328 5e-98
ref|NP_357832.1| Branch migration of Holliday structures [Streptococcus pneumoniae
R6] gb|AAK99042.1| Branch migration of Holliday
structures [Streptococcus pneumoniae R6] pir||F97901
branch migration of Holliday structures [imported] -
Streptococcus pneumoniae (strain R6)
sp|Q8CWU7|RUVB_STRR6 Holliday junction DNA helicase ruvB
Length = 309



Score = 470 bits (1780), Expect = e-132
Identities = 309/309 (100%), Positives = 309/309 (100%)

Query: 20 LRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVN 79
LRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVN
Sbjct: 1 LRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVN 60

Query: 80 LKQTSGPVIEKAGDLVAILNELEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAG 139
LKQTSGPVIEKAGDLVAILNELEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAG
Sbjct: 61 LKQTSGPVIEKAGDLVAILNELEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAG 120

Query: 140 EGSRSVHLELPPFTLIGATTRAGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEM 199
EGSRSVHLELPPFTLIGATTRAGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEM
Sbjct: 121 EGSRSVHLELPPFTLIGATTRAGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEM 180

Query: 200 EITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGNGVIDDIITDKALTMLDVDHEGLD 259
EITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGNGVIDDIITDKALTMLDVDHEGLD
Sbjct: 181 EITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGNGVIDDIITDKALTMLDVDHEGLD 240

Query: 260 YVDQKILRTMIEMYSGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATA 319
YVDQKILRTMIEMYSGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATA
Sbjct: 241 YVDQKILRTMIEMYSGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATA 300

Query: 320 KAYEHLGYE 328
KAYEHLGYE
Sbjct: 301 KAYEHLGYE 309