>1fjgT 1 99 8 106 3e-15
ref|YP_144663.1| 30S ribosomal protein S20 [Thermus thermophilus HB8]
emb|CAC15067.1| ribosomal protein S20 [Thermus
thermophilus] dbj|BAD71220.1| 30S ribosomal protein S20
[Thermus thermophilus HB8] sp|P80380|RS20_THETH 30S
ribosomal protein S20 pdb|1N36|T Chain T, Structure Of
The Thermus Thermophilus 30s Ribosomal Subunit In The
Presence Of Crystallographically Disordered Codon And
Near-Cognate Transfer Rna Anticodon Stem-Loop
Mismatched At The Second Codon Position pdb|1N34|T
Chain T, Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit In The Presence Of Codon And
Crystallographically Disordered Near-Cognate Transfer
Rna Anticodon Stem-Loop Mismatched At The First Codon
Position pdb|1N33|T Chain T, Structure Of The Thermus
Thermophilus 30s Ribosomal Subunit Bound To Codon And
Near-Cognate Transfer Rna Anticodon Stem-Loop
Mismatched At The Second Codon Position At The A Site
With Paromomycin pdb|1N32|T Chain T, Structure Of The
Thermus Thermophilus 30s Ribosomal Subunit Bound To
Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop
Mismatched At The First Codon Position At The A Site
With Paromomycin pdb|1XNR|T Chain T, Crystal Structure
Of An Inosine-Cytosine Wobble Base Pair In The Context
Of The Decoding Center pdb|1XNQ|T Chain T, Structure Of
An Inosine-Adenine Wobble Base Pair Complex In The
Context Of The Decoding Center pdb|1XMQ|T Chain T,
Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To
The Decoding Center pdb|1XMO|T Chain T, Crystal
Structure Of Mnm5u34t6a37-Trnalysuuu Complexed With
Aag-Mrna In The Decoding Center pdb|1IBM|T Chain T,
Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site pdb|1IBL|T Chain T, Structure Of The Thermus
Thermophilus 30s Ribosomal Subunit In Complex With A
Messenger Rna Fragment And Cognate Transfer Rna
Anticodon Stem-Loop Bound At The A Site And With The
Antibiotic Paromomycin pdb|1IBK|T Chain T, Structure Of
The Thermus Thermophilus 30s Ribosomal Subunit In
Complex With The Antibiotic Paromomycin
Length = 99



Score = 32.7 bits (105), Expect = 1.7
Identities = 31/81 (38%), Positives = 48/81 (58%)

Query: 17 SAKKRAITSEKRRQHNASRRSMMRTFFKKVIAAIEAGEKENATKAFADMQPVLDRMATKG 76
SA KR S KRR N +++S ++T+ KK I + G+ E A K + ++D+ A
Sbjct: 4 SALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGS 63

Query: 77 LIHKNKAARQKARLTAKIKAL 97
+HKN AAR+K+RL K++ L
Sbjct: 64 TLHKNAAARRKSRLMRKVRQL 84