BP911730
Clone id YMU001_000008_E04
Library
Length 483
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000008_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTCCCCAACATCCTTCTATTGATTGGTCAAACACCCAGAGGGTTACAATCATGTCTGCAC
ACAAGGCATTCTGAACAGCTTTTACTCTCTTAATGAAGCTCACAAAAAGCTAGAATACGC
ATATAAGGTTTTTACACTCCATTCCTAACAATCCCAGTGATCAGAAGTCTTGCAACATGC
AATTACAGTCACCCATAAAATCTCAACTTCACTAACAAAAATTTCTGTACAATTTGATCT
CCCCTTTGTCTCCAACTTAAAGATGGCATCAGCGAGCGCACTACCGAATTGCCATCCAGA
ACTCTCAAAGGAACAAGGCAAATCGCTCTTTAACTGGGATCCTGAGAGACCTTTAGGGCA
ATAGAGACCAGAGATTCAATGGCTTATAATGTGATGCGTCCACAGAGCCGAAATTTCTTT
TGAGGTGAGCCAAGAAAAGTCTCAAAAACCCAGATGTCCTCCACTGAGATCTGTTTCAAT
GGA
■■Homology search results ■■ -
sp_hit_id Q12QK6
Definition sp|Q12QK6|NQRA_SHEDO Na(+)-translocating NADH-quinone reductase subunit A OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Align length 47
Score (bit) 30.4
E-value 4.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911730|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_E04.
(466 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q12QK6|NQRA_SHEDO Na(+)-translocating NADH-quinone reductase ... 30 4.0
sp|Q0VAY3|F187B_MOUSE Protein FAM187B OS=Mus musculus GN=Fam187b... 30 4.0
sp|P41226|UBA7_HUMAN Ubiquitin-like modifier-activating enzyme 7... 29 8.9
sp|Q801D8|MPRA_CYNNE Membrane progestin receptor alpha OS=Cynosc... 29 8.9
sp|Q6BRZ9|GPI18_DEBHA GPI mannosyltransferase 2 OS=Debaryomyces ... 29 8.9

>sp|Q12QK6|NQRA_SHEDO Na(+)-translocating NADH-quinone reductase
subunit A OS=Shewanella denitrificans (strain OS217 /
ATCC BAA-1090 / DSM 15013) GN=nqrA PE=3 SV=1
Length = 444

Score = 30.4 bits (67), Expect = 4.0
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -2

Query: 357 PKGLSGSQLKSDLPCSFESSGWQFGSALADAIFKLETKGRSNCTEIF 217
P GL G+ + + LP S + S W G AI +L T+G N +F
Sbjct: 214 PAGLVGTHIHNLLPASAKRSVWHIGYQDVIAIGQLFTQGVLNTERVF 260


>sp|Q0VAY3|F187B_MOUSE Protein FAM187B OS=Mus musculus GN=Fam187b
PE=2 SV=1
Length = 358

Score = 30.4 bits (67), Expect = 4.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -2

Query: 432 WLTSKEISALWTHHIISH*ISGLYCPKGLSGSQLKSDLPCSFESSGWQFGSALADAIFKL 253
WL + LW +IS + LSGS + L C++ + W F S+L D + +
Sbjct: 6 WLVGLSLPMLWAQRLISCPYKNVCQYALLSGSDVI--LQCNYPKALWYFSSSLEDKLSLV 63

Query: 252 ETK 244
+K
Sbjct: 64 NSK 66


>sp|P41226|UBA7_HUMAN Ubiquitin-like modifier-activating enzyme 7
OS=Homo sapiens GN=UBA7 PE=1 SV=2
Length = 1012

Score = 29.3 bits (64), Expect = 8.9
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2

Query: 245 FVSNLKMASASALPNCHPELSKEQGKSLFNWDPERPL 355
F SNL++ASASA PE KE K+L W PL
Sbjct: 769 FASNLELASASA--EFGPEQQKELNKALEVWSVGPPL 803


>sp|Q801D8|MPRA_CYNNE Membrane progestin receptor alpha OS=Cynoscion
nebulosus GN=mpra PE=1 SV=1
Length = 352

Score = 29.3 bits (64), Expect = 8.9
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2

Query: 294 WQFGSALADAIFKLETKGRSNCTEIFVSEVEIL-WVTVIACC 172
+Q+GSALA + +E + + +F+ L W+T CC
Sbjct: 153 YQYGSALAHYYYAIEKEWHTKVQGLFLPAAAFLAWLTCFGCC 194


>sp|Q6BRZ9|GPI18_DEBHA GPI mannosyltransferase 2 OS=Debaryomyces
hansenii GN=GPI18 PE=3 SV=1
Length = 428

Score = 29.3 bits (64), Expect = 8.9
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Frame = -2

Query: 441 DFSWLTSKEISALWTHHI--ISH*ISG--LYCPKGLSGSQLKSDLPCSFESSGWQFGSA- 277
+F+ L SK ++L TH I +++ +SG + G+ G+ L L F ++FG
Sbjct: 199 NFNHLNSK--NSLKTHWIYKVTYLLSGTMVSIAYGIRGNCLL--LGAMFLFDLYEFGIRN 254

Query: 276 --LADAIFKLETKGRSNCTEIFVSEVEILWVTVIACCKTSDHWDC*EWSVKTLYAYS 112
+ D+I L + G +IFVS + + W T C W C W + +L++Y+
Sbjct: 255 RDITDSILSLVSGG-----QIFVSIIALNWYTYAIFCPARGEW-CQSW-IPSLFSYA 304


tr_hit_id B8LMY8
Definition tr|B8LMY8|B8LMY8_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 26
Score (bit) 38.5
E-value 0.17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911730|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_E04.
(466 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LMY8|B8LMY8_PICSI Putative uncharacterized protein OS=Picea... 39 0.17
tr|B8B5D5|B8B5D5_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.4
tr|B7ZXE0|B7ZXE0_MAIZE Putative uncharacterized protein OS=Zea m... 35 1.4
tr|B4G030|B4G030_MAIZE Putative uncharacterized protein OS=Zea m... 35 1.4
tr|A7PSF3|A7PSF3_VITVI Chromosome chr14 scaffold_27, whole genom... 34 3.1
tr|A1SYS6|A1SYS6_PSYIN Amidase OS=Psychromonas ingrahamii (strai... 34 4.2

>tr|B8LMY8|B8LMY8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 190

Score = 38.5 bits (88), Expect = 0.17
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3

Query: 464 VEDIWVFETFLGSPQKKFRLCGRITL 387
VEDIWVFE L P ++RLCGRI+L
Sbjct: 165 VEDIWVFERSLFQPGARWRLCGRISL 190


>tr|B8B5D5|B8B5D5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_27102 PE=4 SV=1
Length = 321

Score = 35.4 bits (80), Expect = 1.4
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3

Query: 464 VEDIWVFETFLGSPQKKFRLCGRITL 387
V+DIWVFE L P +R+CGRITL
Sbjct: 296 VKDIWVFERSLFHPGAYWRVCGRITL 321


>tr|B7ZXE0|B7ZXE0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 303

Score = 35.4 bits (80), Expect = 1.4
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3

Query: 464 VEDIWVFETFLGSPQKKFRLCGRITL 387
V+DIWVFE L P +R+CGRITL
Sbjct: 278 VKDIWVFERSLFHPGAYWRVCGRITL 303


>tr|B4G030|B4G030_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 303

Score = 35.4 bits (80), Expect = 1.4
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3

Query: 464 VEDIWVFETFLGSPQKKFRLCGRITL 387
V+DIWVFE L P +R+CGRITL
Sbjct: 278 VKDIWVFERSLFHPGAYWRVCGRITL 303


>tr|A7PSF3|A7PSF3_VITVI Chromosome chr14 scaffold_27, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00022883001
PE=4 SV=1
Length = 196

Score = 34.3 bits (77), Expect = 3.1
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -3

Query: 464 VEDIWVFETFLGSPQKKFRLCGRITL 387
V D+WVFE L P +RLCGRI+L
Sbjct: 171 VRDVWVFERSLFHPGAYWRLCGRISL 196


>tr|A1SYS6|A1SYS6_PSYIN Amidase OS=Psychromonas ingrahamii (strain
37) GN=Ping_2939 PE=4 SV=1
Length = 411

Score = 33.9 bits (76), Expect = 4.2
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -2

Query: 435 SWLTSKEISALWTHHIISH*-ISGLYCPKGLSGSQLKSDLPCSFESSGWQFGSALADAIF 259
+WL S E AL T II+ I G +C SG S+L C F+ +G+A+
Sbjct: 47 TWLMSHE-PALHTSPIITQLLIQGAHC----SGRVQSSELACGFDGMNTHYGTAINHLAP 101

Query: 258 KLETKGRSNCT 226
K ++ G S+C+
Sbjct: 102 KCQSGGSSSCS 112