BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912216|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_E04.
         (523 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q50028|PUR1_MYCLE Amidophosphoribosyltransferase OS=Mycobacte...    30   9.0  
sp|Q3UJU9|RMD3_MOUSE Regulator of microtubule dynamics protein 3...    30   9.1  

>sp|Q50028|PUR1_MYCLE Amidophosphoribosyltransferase
          OS=Mycobacterium leprae GN=purF PE=3 SV=1
          Length = 556

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +3

Query: 3  AAQYIPHLCRLGESGPRIRCLHHC 74
          A +++P + RLG +G R+RC+ +C
Sbjct: 11 APKHVPQIRRLGRAGRRLRCVTNC 34


>sp|Q3UJU9|RMD3_MOUSE Regulator of microtubule dynamics protein 3
           OS=Mus musculus GN=Fam82a2 PE=1 SV=2
          Length = 470

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
 Frame = +1

Query: 1   RLHSISLTCADLGRVV---LGLG-VCIIALKL*NKTRPHHPNHSLPNAYIRASLVHSQGI 168
           RL ++  + A LG ++    GLG +C++  +   +T+ H  +HSLPN     SL ++Q  
Sbjct: 3   RLGALGGSRAGLGLLLGTAAGLGFLCVLYSQRWKRTQRHGRSHSLPN-----SLDYAQAS 57

Query: 169 R*GSFRTTMYRVESGDQGD 225
             G  + T +R   G+ GD
Sbjct: 58  ERGR-QVTQFRAIPGEAGD 75

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912216|Adiantum capillus-veneris mRNA, clone:
YMU001_000016_E04.
         (523 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7FRS2|B7FRS2_PHATR Predicted protein (Fragment) OS=Phaeodact...    33   6.6  
tr|Q2LCK9|Q2LCK9_9HIV1 Gag protein (Fragment) OS=Human immunodef...    33   8.6  
tr|Q9FUY4|Q9FUY4_MAIZE Protein kinase AKINbetagamma-2 OS=Zea may...    33   8.6  

>tr|B7FRS2|B7FRS2_PHATR Predicted protein (Fragment)
           OS=Phaeodactylum tricornutum CCAP 1055/1
           GN=PHATRDRAFT_9860 PE=4 SV=1
          Length = 318

 Score = 33.5 bits (75), Expect = 6.6
 Identities = 18/56 (32%), Positives = 32/56 (57%)
 Frame = +1

Query: 268 LHARNNVHTHTMECYKGKQNFS*QVGSKGLFSTVFLWRYMSTRQVISNSSLSTTLL 435
           + + N VHTH ++C +   +    + SK   + + LW+ + T +  S+SSLS+ LL
Sbjct: 173 IFSTNQVHTHCVDCVRFVGDL---ILSKSTENKIILWKPLLTLENTSSSSLSSILL 225


>tr|Q2LCK9|Q2LCK9_9HIV1 Gag protein (Fragment) OS=Human
           immunodeficiency virus 1 GN=gag PE=4 SV=1
          Length = 117

 Score = 33.1 bits (74), Expect = 8.6
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
 Frame = +2

Query: 143 HLLYTHRAYDRGA-------SGRRCTELKAGTRETMATAHEGFFVSIIFCTLETMYIHIQ 301
           HL++  R  +R A       +   C ++    + T+ T  E F    ++ T+ T+Y   Q
Sbjct: 3   HLVWASRELERFALNPSLLETSEGCQQILEQLQPTLKTGSEEF--KSLYNTVATLYCVHQ 60

Query: 302 WSAIKESKISLNKWDQ 349
           W AIK++K +L+K ++
Sbjct: 61  WIAIKDTKEALDKIEE 76


>tr|Q9FUY4|Q9FUY4_MAIZE Protein kinase AKINbetagamma-2 OS=Zea mays
           PE=2 SV=1
          Length = 496

 Score = 33.1 bits (74), Expect = 8.6
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 306 LHCMCMYIVSSVQNIIDTKNPSCAVAIVSLVPAFNSVHRRPEAPL 172
           L C+C Y  +S  N+     P C++ + S VP    ++ RP A L
Sbjct: 322 LKCICRYFKNSTGNLPILNQPVCSIPLGSWVPKIGDLNSRPLAML 366