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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912509
Clone id YMU001_000019_C03
Library
Length 551
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000019_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTTTTTATTCCCCAACATCCTTCTATTGATTGATCAAACACCCAGAGGG
TTACAATCATGTCTGCACACAAGGCATTCTGAACAGCTTTTACTCTCTTAATGAAGCTCA
CAAAAAGCTAGAATACGCATATAAGGTTTTTACACTCCATTCCTAACAATCCCAGTGATC
AGAAGTCTTGCAACATGCAATTACAGTCACCCATAAAATCTCAACTTCACTAACAAAAAT
TTCTGTACAATTTGATCTCCCCTTTGTCTCCAACTTAAAGATGGCATCAGCGAGCGCACT
ACCGAATTGCCATCCAGAACTCACAAAGGAGCAAGGCAAATCGCTCTTTAACTGGGATCC
TGAGAGACCTTTAGGGCAATAGAGACCAGAGATTCAATGGCTTATAATGTGATGCGTCCA
CAGAGCCGAAATTTCTTTTGAGGTGAGCCAAGAAAAGTCTCAAAAACCCAGATGTCCTCC
ACTGAGATCTGTTTCAATGGATCACCCGCAACCAACTTCCCGTCTTGATCAAAAGCTCCA
AAATACTGGGT
■■Homology search results ■■ -
sp_hit_id Q6BRZ9
Definition sp|Q6BRZ9|GPI18_DEBHA GPI mannosyltransferase 2 OS=Debaryomyces hansenii
Align length 117
Score (bit) 30.8
E-value 4.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912509|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_C03.
         (531 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6BRZ9|GPI18_DEBHA GPI mannosyltransferase 2 OS=Debaryomyces ...    31   4.2  
sp|Q0VAY3|F187B_MOUSE Protein FAM187B OS=Mus musculus GN=Fam187b...    30   7.2  
sp|B1AXH1|NHSL2_MOUSE NHS-like protein 2 OS=Mus musculus GN=Nhsl...    30   9.4  

>sp|Q6BRZ9|GPI18_DEBHA GPI mannosyltransferase 2 OS=Debaryomyces
           hansenii GN=GPI18 PE=3 SV=1
          Length = 428

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
 Frame = -3

Query: 439 DFSWLTSKEISALWTHHI--ISH*ISG--LYCPKGLSGSQLKSDLPCSFVSSGWQFGSA- 275
           +F+ L SK  ++L TH I  +++ +SG  +    G+ G+ L   L   F+   ++FG   
Sbjct: 199 NFNHLNSK--NSLKTHWIYKVTYLLSGTMVSIAYGIRGNCLL--LGAMFLFDLYEFGIRN 254

Query: 274 --LADAIFKLETKGRSNCTEIFVSEVEILWVTVIACCKTSDHWDC*EWSVKTLYAYS 110
             + D+I  L + G     +IFVS + + W T    C     W C  W + +L++Y+
Sbjct: 255 RDITDSILSLVSGG-----QIFVSIIALNWYTYAIFCPARGEW-CQSW-IPSLFSYA 304


>sp|Q0VAY3|F187B_MOUSE Protein FAM187B OS=Mus musculus GN=Fam187b
           PE=2 SV=1
          Length = 358

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = -3

Query: 430 WLTSKEISALWTHHIISH*ISGLYCPKGLSGSQLKSDLPCSFVSSGWQFGSALADAIFKL 251
           WL    +  LW   +IS     +     LSGS +   L C++  + W F S+L D +  +
Sbjct: 6   WLVGLSLPMLWAQRLISCPYKNVCQYALLSGSDVI--LQCNYPKALWYFSSSLEDKLSLV 63

Query: 250 ETK 242
            +K
Sbjct: 64  NSK 66


>sp|B1AXH1|NHSL2_MOUSE NHS-like protein 2 OS=Mus musculus GN=Nhsl2
           PE=2 SV=1
          Length = 854

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 399 HRAEISFEVSQEKSQKPRCPPLRSVSMDHPQP 494
           HR + S  +S +K++K   PP+RSVS+   +P
Sbjct: 185 HRRQRSKSISLKKAKKKPSPPMRSVSLVKDEP 216
tr_hit_id B8B5D5
Definition tr|B8B5D5|B8B5D5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 48
Score (bit) 52.0
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912509|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_C03.
         (531 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8B5D5|B8B5D5_ORYSI Putative uncharacterized protein OS=Oryza...    52   2e-05
tr|A7PSF3|A7PSF3_VITVI Chromosome chr14 scaffold_27, whole genom...    52   2e-05
tr|B7ZXE0|B7ZXE0_MAIZE Putative uncharacterized protein OS=Zea m...    52   2e-05
tr|B4G030|B4G030_MAIZE Putative uncharacterized protein OS=Zea m...    52   2e-05
tr|A4S1X3|A4S1X3_OSTLU Predicted protein OS=Ostreococcus lucimar...    51   3e-05
tr|Q012S0|Q012S0_OSTTA Putative mitochondrial/chloroplast riboso...    51   4e-05
tr|Q8GXP7|Q8GXP7_ARATH Putative uncharacterized protein At5g2739...    48   3e-04
tr|B3H4A1|B3H4A1_ARATH Uncharacterized protein At5g27395.2 OS=Ar...    48   3e-04
tr|B8LMY8|B8LMY8_PICSI Putative uncharacterized protein OS=Picea...    47   6e-04
tr|A8I2I8|A8I2I8_CHLRE Predicted protein OS=Chlamydomonas reinha...    37   0.49 
tr|Q7D2D0|Q7D2D0_AGRT5 Putative uncharacterized protein OS=Agrob...    36   1.1  
tr|A6WX64|A6WX64_OCHA4 Import inner membrane translocase subunit...    35   1.8  
tr|B6BRN3|B6BRN3_9RICK Import inner membrane translocase, subuni...    35   1.8  
tr|A9TRZ2|A9TRZ2_PHYPA Predicted protein OS=Physcomitrella paten...    34   4.0  
tr|A9TNN3|A9TNN3_PHYPA Predicted protein OS=Physcomitrella paten...    34   4.1  
tr|B8NML1|B8NML1_ASPFL Putative uncharacterized protein OS=Asper...    34   4.1  
tr|A9T8K9|A9T8K9_PHYPA Predicted protein OS=Physcomitrella paten...    34   5.3  
tr|B2IC75|B2IC75_BEII9 Import inner membrane translocase subunit...    34   5.4  
tr|Q57AI4|Q57AI4_BRUAB Putative uncharacterized protein OS=Bruce...    33   7.0  
tr|A1SYS6|A1SYS6_PSYIN Amidase OS=Psychromonas ingrahamii (strai...    33   9.0  

>tr|B8B5D5|B8B5D5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_27102 PE=4 SV=1
          Length = 321

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 24/48 (50%), Positives = 34/48 (70%)
 Frame = -1

Query: 528 QYFGAFDQDGKLVAGDPLKQISVEDIWVFETFLGSPQKKFRLCGRITL 385
           Q F A++  G++V+GD  K++ V+DIWVFE  L  P   +R+CGRITL
Sbjct: 274 QKFEAYNTKGEVVSGDKSKEVLVKDIWVFERSLFHPGAYWRVCGRITL 321


>tr|A7PSF3|A7PSF3_VITVI Chromosome chr14 scaffold_27, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022883001
           PE=4 SV=1
          Length = 196

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 25/48 (52%), Positives = 32/48 (66%)
 Frame = -1

Query: 528 QYFGAFDQDGKLVAGDPLKQISVEDIWVFETFLGSPQKKFRLCGRITL 385
           Q F A+D  G +VAGD  K++ V D+WVFE  L  P   +RLCGRI+L
Sbjct: 149 QKFEAYDSKGCVVAGDKDKEVLVRDVWVFERSLFHPGAYWRLCGRISL 196


>tr|B7ZXE0|B7ZXE0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 303

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 24/48 (50%), Positives = 33/48 (68%)
 Frame = -1

Query: 528 QYFGAFDQDGKLVAGDPLKQISVEDIWVFETFLGSPQKKFRLCGRITL 385
           Q F A++  G +V+GD  K++ V+DIWVFE  L  P   +R+CGRITL
Sbjct: 256 QKFEAYNSKGAVVSGDKSKEVLVKDIWVFERSLFHPGAYWRVCGRITL 303


>tr|B4G030|B4G030_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 303

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 24/48 (50%), Positives = 33/48 (68%)
 Frame = -1

Query: 528 QYFGAFDQDGKLVAGDPLKQISVEDIWVFETFLGSPQKKFRLCGRITL 385
           Q F A++  G +V+GD  K++ V+DIWVFE  L  P   +R+CGRITL
Sbjct: 256 QKFEAYNSKGAVVSGDKSKEVLVKDIWVFERSLFHPGAYWRVCGRITL 303


>tr|A4S1X3|A4S1X3_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_33251 PE=4 SV=1
          Length = 221

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 24/46 (52%), Positives = 31/46 (67%)
 Frame = -1

Query: 528 QYFGAFDQDGKLVAGDPLKQISVEDIWVFETFLGSPQKKFRLCGRI 391
           Q F A+D  G+LVAGDP + + VED WVFE  L  P  ++RL GR+
Sbjct: 167 QRFAAYDARGRLVAGDPDEILDVEDFWVFEHGLKIPNARWRLAGRL 212


>tr|Q012S0|Q012S0_OSTTA Putative mitochondrial/chloroplast ribosomal
           protein L45 (ISS) OS=Ostreococcus tauri GN=Ot08g03720
           PE=4 SV=1
          Length = 285

 Score = 50.8 bits (120), Expect = 4e-05
 Identities = 23/46 (50%), Positives = 31/46 (67%)
 Frame = -1

Query: 528 QYFGAFDQDGKLVAGDPLKQISVEDIWVFETFLGSPQKKFRLCGRI 391
           Q F A+D  G+LV+GDP + + VED WVFE  L  P  ++RL GR+
Sbjct: 222 QRFAAYDGKGRLVSGDPDEVLDVEDFWVFEHGLKIPNSRWRLAGRL 267


>tr|Q8GXP7|Q8GXP7_ARATH Putative uncharacterized protein
           At5g27390/F21A20_100 OS=Arabidopsis thaliana
           GN=At5g27390/F21A20_100 PE=2 SV=1
          Length = 313

 Score = 48.1 bits (113), Expect = 3e-04
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = -1

Query: 528 QYFGAFDQDGKLVAGDPLKQISVEDIWVFETFLGSPQKKFRLCGRITL 385
           Q F A+D  G + AGD  K++ V DIWVFE  L      +RLCGRI L
Sbjct: 266 QKFEAYDAKGNVAAGDKNKEVLVRDIWVFEKSLFHTGAYWRLCGRIKL 313


>tr|B3H4A1|B3H4A1_ARATH Uncharacterized protein At5g27395.2
           OS=Arabidopsis thaliana GN=At5g27395 PE=4 SV=1
          Length = 296

 Score = 48.1 bits (113), Expect = 3e-04
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = -1

Query: 528 QYFGAFDQDGKLVAGDPLKQISVEDIWVFETFLGSPQKKFRLCGRITL 385
           Q F A+D  G + AGD  K++ V DIWVFE  L      +RLCGRI L
Sbjct: 249 QKFEAYDAKGNVAAGDKNKEVLVRDIWVFEKSLFHTGAYWRLCGRIKL 296


>tr|B8LMY8|B8LMY8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 190

 Score = 47.0 bits (110), Expect = 6e-04
 Identities = 24/48 (50%), Positives = 31/48 (64%)
 Frame = -1

Query: 528 QYFGAFDQDGKLVAGDPLKQISVEDIWVFETFLGSPQKKFRLCGRITL 385
           Q F A+D  G L+  D   ++ VEDIWVFE  L  P  ++RLCGRI+L
Sbjct: 145 QKFAAYDLKGILITED--SKVLVEDIWVFERSLFQPGARWRLCGRISL 190


>tr|A8I2I8|A8I2I8_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_141592 PE=4 SV=1
          Length = 311

 Score = 37.4 bits (85), Expect = 0.49
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -1

Query: 528 QYFGAFDQDGKLVAGDPLKQISVEDIWVFE 439
           Q    +D  GKL+AGDP K++ V D WVFE
Sbjct: 256 QVVAVYDNRGKLLAGDPDKELEVVDHWVFE 285