BP912820 |
Clone id |
YMU001_000023_C05 |
Library |
YMU01 |
Length |
378 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000023_C05. |
Accession |
BP912820 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2044Contig1 |
Sequence |
AAAGGATCAGCAATGATTGATATCACAGCAATAACCCTTTGGCCAGGAGAATGCAATACC AGTTGTCGTTTTCAACTTAAATGAACCTGGAAACATGTCCAAGGCTGTAAGTGGAGAACG GATAGGCACCCTTATTGATCAGACGGGGCCTGCACCTTTATATTAATGAAATTAATTATT TCTAGTTTCCTGGAATAGATGGGGCCCAAATAACGGCTGCATTTCAAATCCAAAGCATGC CAACCTTGGTAAAGCGGACGTTGCAGCAAGATGTATACTACATCTATTGGCATTTGCCAT GAATTGGTCTGTGCTCGTGGCTCTTCACGCCGGCCTCAGTTTTGACATAGACGGTTTTGT ACATAAGATGGGCGAATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q88VJ6 |
Definition |
sp|Q88VJ6|PYRH_LACPL Uridylate kinase OS=Lactobacillus plantarum |
Align length |
30 |
Score (bit) |
48.1 |
E-value |
1.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7UQU8 |
Definition |
tr|A7UQU8|A7UQU8_MEDTR Homeodomain-like; Uridylate kinase OS=Medicago truncatula |
Align length |
37 |
Score (bit) |
60.1 |
E-value |
5.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912820|Adiantum capillus-veneris mRNA, clone: YMU001_000023_C05. (378 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7UQU8|A7UQU8_MEDTR Homeodomain-like; Uridylate kinase OS=Med... 60 5e-08 tr|A7PPM7|A7PPM7_VITVI Chromosome chr8 scaffold_23, whole genome... 58 2e-07 tr|A9TIY7|A9TIY7_PHYPA Predicted protein OS=Physcomitrella paten... 55 2e-07 tr|Q7XLY5|Q7XLY5_ORYSA OSJNBa0042I15.5 protein OS=Oryza sativa G... 57 6e-07 tr|Q0JDG0|Q0JDG0_ORYSJ Os04g0405800 protein OS=Oryza sativa subs... 57 6e-07 tr|Q01L58|Q01L58_ORYSA OSIGBa0142C11.1 protein OS=Oryza sativa G... 57 6e-07 tr|A3ATK4|A3ATK4_ORYSJ Putative uncharacterized protein OS=Oryza... 57 6e-07 tr|B7FL24|B7FL24_MEDTR Putative uncharacterized protein OS=Medic... 56 1e-06 tr|Q9LSA9|Q9LSA9_ARATH Similarity to uridylate kinase (Putative ... 55 1e-06 tr|A9RI10|A9RI10_PHYPA Predicted protein (Fragment) OS=Physcomit... 54 2e-06 tr|A7QBK5|A7QBK5_VITVI Chromosome chr13 scaffold_74, whole genom... 54 4e-06 tr|Q94JR1|Q94JR1_ARATH AT3g10030/T22K18_15 OS=Arabidopsis thalia... 52 1e-05 tr|B6TC37|B6TC37_MAIZE Uridylate kinase OS=Zea mays PE=2 SV=1 51 3e-05 tr|B4FSB1|B4FSB1_MAIZE Putative uncharacterized protein OS=Zea m... 51 3e-05 tr|Q5JJV9|Q5JJV9_ORYSJ cDNA clone:001-039-E08, full insert seque... 50 7e-05 tr|B8A9M2|B8A9M2_ORYSI Putative uncharacterized protein OS=Oryza... 50 7e-05 tr|A3A1U8|A3A1U8_ORYSJ Putative uncharacterized protein OS=Oryza... 50 7e-05 tr|B4FLT1|B4FLT1_MAIZE Putative uncharacterized protein OS=Zea m... 49 2e-04 tr|A7QB90|A7QB90_VITVI Chromosome chr4 scaffold_73, whole genome... 47 4e-04 tr|A8UET0|A8UET0_9FLAO Uridylate kinase OS=Flavobacteriales bact... 47 5e-04 tr|B2V4F6|B2V4F6_CLOBA UMP kinase OS=Clostridium botulinum (stra... 46 0.001 tr|B2A382|B2A382_NATTJ Uridylate kinase OS=Natranaerobius thermo... 46 0.001 tr|B1I2K2|B1I2K2_DESAP Uridylate kinase OS=Desulforudis audaxvia... 46 0.001 tr|A3U6N3|A3U6N3_9FLAO Uridylate kinase OS=Croceibacter atlantic... 46 0.001 tr|A4CGD6|A4CGD6_9FLAO Uridylate kinase OS=Robiginitalea biforma... 45 0.001 tr|A1ZLT1|A1ZLT1_9SPHI Uridylate kinase OS=Microscilla marina AT... 45 0.001 tr|B7DMI6|B7DMI6_9BACL Uridylate kinase OS=Alicyclobacillus acid... 45 0.002 tr|A9DP10|A9DP10_9FLAO Uridylate kinase OS=Kordia algicida OT-1 ... 45 0.002 tr|B2TJ42|B2TJ42_CLOBB UMP kinase OS=Clostridium botulinum (stra... 45 0.002 tr|B3WES6|B3WES6_LACCB Uridylate kinase (UK) (Uridine monophosph... 44 0.003
>tr|A7UQU8|A7UQU8_MEDTR Homeodomain-like; Uridylate kinase OS=Medicago truncatula GN=MtrDRAFT_AC139525g31v2 PE=4 SV=1 Length = 512
Score = 60.1 bits (144), Expect = 5e-08 Identities = 28/37 (75%), Positives = 33/37 (89%) Frame = +2
Query: 38 FGQENAIPVVVFNLNEPGNMSKAVSGERIGTLIDQTG 148 F +ENAIPVVVFNL PGN+SKA+ GE++GTLIDQTG Sbjct: 473 FCEENAIPVVVFNLLAPGNISKALCGEQVGTLIDQTG 509
>tr|A7PPM7|A7PPM7_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021708001 PE=4 SV=1 Length = 574
Score = 58.2 bits (139), Expect = 2e-07 Identities = 26/37 (70%), Positives = 33/37 (89%) Frame = +2
Query: 38 FGQENAIPVVVFNLNEPGNMSKAVSGERIGTLIDQTG 148 F +EN IPVVVFNL EPGN+S+A+ G+++GTLIDQTG Sbjct: 535 FCEENRIPVVVFNLLEPGNISRALCGDQVGTLIDQTG 571
>tr|A9TIY7|A9TIY7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_60371 PE=4 SV=1 Length = 252
Score = 55.5 bits (132), Expect(2) = 2e-07 Identities = 26/32 (81%), Positives = 30/32 (93%) Frame = +2
Query: 44 QENAIPVVVFNLNEPGNMSKAVSGERIGTLID 139 QEN IPVVVFNL++ GN+SKA+SGERIGTLID Sbjct: 213 QENCIPVVVFNLSKAGNISKALSGERIGTLID 244
Score = 23.1 bits (48), Expect(2) = 2e-07 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1
Query: 1 KGSAMIDITAITLWPGEC 54 KG +++DITAITL C Sbjct: 199 KGLSVMDITAITLCQENC 216
>tr|Q7XLY5|Q7XLY5_ORYSA OSJNBa0042I15.5 protein OS=Oryza sativa GN=OSJNBa0042I15.5 PE=4 SV=3 Length = 582
Score = 56.6 bits (135), Expect = 6e-07 Identities = 23/35 (65%), Positives = 32/35 (91%) Frame = +2
Query: 44 QENAIPVVVFNLNEPGNMSKAVSGERIGTLIDQTG 148 QEN IPVV+FN+ EPGN+SKA+ G+++GTL+DQ+G Sbjct: 545 QENNIPVVIFNMLEPGNISKAICGDQVGTLVDQSG 579
>tr|Q0JDG0|Q0JDG0_ORYSJ Os04g0405800 protein OS=Oryza sativa subsp. japonica GN=Os04g0405800 PE=4 SV=1 Length = 301
Score = 56.6 bits (135), Expect = 6e-07 Identities = 23/35 (65%), Positives = 32/35 (91%) Frame = +2
Query: 44 QENAIPVVVFNLNEPGNMSKAVSGERIGTLIDQTG 148 QEN IPVV+FN+ EPGN+SKA+ G+++GTL+DQ+G Sbjct: 264 QENNIPVVIFNMLEPGNISKAICGDQVGTLVDQSG 298
>tr|Q01L58|Q01L58_ORYSA OSIGBa0142C11.1 protein OS=Oryza sativa GN=OSIGBa0142C11.1 PE=4 SV=1 Length = 532
Score = 56.6 bits (135), Expect = 6e-07 Identities = 23/35 (65%), Positives = 32/35 (91%) Frame = +2
Query: 44 QENAIPVVVFNLNEPGNMSKAVSGERIGTLIDQTG 148 QEN IPVV+FN+ EPGN+SKA+ G+++GTL+DQ+G Sbjct: 495 QENNIPVVIFNMLEPGNISKAICGDQVGTLVDQSG 529
>tr|A3ATK4|A3ATK4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_014126 PE=4 SV=1 Length = 520
Score = 56.6 bits (135), Expect = 6e-07 Identities = 23/35 (65%), Positives = 32/35 (91%) Frame = +2
Query: 44 QENAIPVVVFNLNEPGNMSKAVSGERIGTLIDQTG 148 QEN IPVV+FN+ EPGN+SKA+ G+++GTL+DQ+G Sbjct: 483 QENNIPVVIFNMLEPGNISKAICGDQVGTLVDQSG 517
>tr|B7FL24|B7FL24_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 324
Score = 55.8 bits (133), Expect = 1e-06 Identities = 25/34 (73%), Positives = 29/34 (85%) Frame = +2
Query: 44 QENAIPVVVFNLNEPGNMSKAVSGERIGTLIDQT 145 QEN IPVVVFNLN+PGN+ KA+ GER+GTLI T Sbjct: 283 QENNIPVVVFNLNKPGNIEKAIKGERVGTLIGAT 316
>tr|Q9LSA9|Q9LSA9_ARATH Similarity to uridylate kinase (Putative uridylate kinase) OS=Arabidopsis thaliana GN=At3g18680 PE=2 SV=1 Length = 339
Score = 55.5 bits (132), Expect = 1e-06 Identities = 25/34 (73%), Positives = 30/34 (88%) Frame = +2
Query: 44 QENAIPVVVFNLNEPGNMSKAVSGERIGTLIDQT 145 QEN IPVVVFNL+EPGN++KA+ GER+GTLI T Sbjct: 297 QENNIPVVVFNLSEPGNIAKAIKGERVGTLIGGT 330
>tr|A9RI10|A9RI10_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_114491 PE=4 SV=1 Length = 245
Score = 53.5 bits (127), Expect(2) = 2e-06 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = +2
Query: 44 QENAIPVVVFNLNEPGNMSKAVSGERIGTLIDQTG 148 QEN IPVVVFNL++ GN+SKA+SG RIGTLID G Sbjct: 205 QENRIPVVVFNLSKAGNISKALSGARIGTLIDGYG 239
Score = 21.6 bits (44), Expect(2) = 2e-06 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = +1
Query: 1 KGSAMIDITAITL 39 KG +++DITAITL Sbjct: 191 KGLSVMDITAITL 203
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