BP913698 |
Clone id |
YMU001_000033_C06 |
Library |
YMU01 |
Length |
544 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000033_C06. |
Accession |
BP913698 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3165Contig1 |
Sequence |
GGGCAAGATAATAGGAGGCCGAGGAAACAGCCCTCTACCTCAACACAACAAGACAAGGAT GAGGCATCCAACAGAGGACAACATGAAGTTTGAGCAACCAAGAGAACAGGAGGCCGAGGA AACACCCTCTACCTCAACACAACAAGACAAGGTTAAGGCATCCACGAAGCCTCAGGATAA CAAGTAGAAGAGGATCAACCACAACCACAATGGCAACACCAACGAGCCGGCATGACACCG CCAAAAGATACACAAGCAATTTTGCAGAAACATCAAAGCAACTAACACAGAATGAAGATT GGTAATTAAACGACGAAGTGATCCTGCAAGTTAACGAGTATGCCAAACAAATGCAGGACA TGATTGAACGACTTAGTTGTAGCACAAGGGCCAAAGAATTAGAAATGACGATTGACGCAC TCCAAGGGGAGTTAGACGACCGACTAAACGTCATCAGTGACCTACAAAGGCAAATGCTTG AAAGCGGAAGCTGAACAACATTAGTTCGCAAGGGATAGACAACAGGAGTACCTGCAGGTA ATAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O77733 |
Definition |
sp|O77733|SEMG1_SAGOE Semenogelin-1 OS=Saguinus oedipus |
Align length |
96 |
Score (bit) |
34.3 |
E-value |
0.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9V1H1 |
Definition |
tr|A9V1H1|A9V1H1_MONBE Predicted protein OS=Monosiga brevicollis |
Align length |
92 |
Score (bit) |
40.8 |
E-value |
0.047 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913698|Adiantum capillus-veneris mRNA, clone: YMU001_000033_C06. (544 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9V1H1|A9V1H1_MONBE Predicted protein OS=Monosiga brevicollis... 41 0.047 tr|A3I2X7|A3I2X7_9SPHI Putative uncharacterized protein OS=Algor... 38 0.40 tr|B6KE46|B6KE46_TOXGO Putative uncharacterized protein OS=Toxop... 37 0.52 tr|A9V0V5|A9V0V5_MONBE Predicted protein OS=Monosiga brevicollis... 37 0.52 tr|Q6FIV9|Q6FIV9_CANGA Strain CBS138 chromosome M complete seque... 37 0.52 tr|Q1X8A3|Q1X8A3_CALJA Semenogelin I (Semenogelin I isoform a pr... 37 0.89 tr|Q1X8A2|Q1X8A2_CALJA Semenogelin II OS=Callithrix jacchus PE=3... 37 0.89 tr|O62833|O62833_CALJA Semenogelin (Fragment) OS=Callithrix jacc... 37 0.89 tr|A4K2U4|A4K2U4_CALJA Semenogelin I isoform b preproprotein OS=... 37 0.89 tr|O96239|O96239_PLAF7 DNA helicase, putative OS=Plasmodium falc... 37 0.89 tr|B4K6Y7|B4K6Y7_DROMO GI22874 OS=Drosophila mojavensis GN=GI228... 37 0.89 tr|A9USS7|A9USS7_MONBE Predicted protein OS=Monosiga brevicollis... 37 0.89 tr|Q5TZ80|Q5TZ80_DANRE Novel protein similar to vertebrate hook ... 36 1.1 tr|B3DI93|B3DI93_DANRE Hook homolog 1 OS=Danio rerio GN=hook1 PE... 36 1.1 tr|A9UZ88|A9UZ88_MONBE Predicted protein OS=Monosiga brevicollis... 36 1.2 tr|Q54N84|Q54N84_DICDI Putative uncharacterized protein OS=Dicty... 36 1.5 tr|A2DFD4|A2DFD4_TRIVA Putative uncharacterized protein OS=Trich... 36 1.5 tr|B3MYV9|B3MYV9_DROAN GF21949 OS=Drosophila ananassae GN=GF2194... 35 2.0 tr|Q54RK7|Q54RK7_DICDI Nipped-B protein OS=Dictyostelium discoid... 35 2.6 tr|B4MMB8|B4MMB8_DROWI GK19256 OS=Drosophila willistoni GN=GK192... 35 2.6 tr|B4G453|B4G453_DROPE GL23032 OS=Drosophila persimilis GN=GL230... 35 2.6 tr|Q73ML2|Q73ML2_TREDE Chromosome partition protein SmC, putativ... 35 3.3 tr|Q86HT4|Q86HT4_DICDI Putative uncharacterized protein OS=Dicty... 35 3.4 tr|Q554X7|Q554X7_DICDI Putative uncharacterized protein OS=Dicty... 35 3.4 tr|A9UVE3|A9UVE3_MONBE Predicted protein OS=Monosiga brevicollis... 35 3.4 tr|A7SGJ9|A7SGJ9_NEMVE Predicted protein OS=Nematostella vectens... 35 3.4 tr|A7SGJ8|A7SGJ8_NEMVE Predicted protein (Fragment) OS=Nematoste... 35 3.4 tr|A6RA80|A6RA80_AJECN Putative uncharacterized protein OS=Ajell... 35 3.4 tr|Q54MP7|Q54MP7_DICDI Putative uncharacterized protein OS=Dicty... 34 4.4 tr|B3MSG7|B3MSG7_DROAN GF20803 OS=Drosophila ananassae GN=GF2080... 34 4.4
>tr|A9V1H1|A9V1H1_MONBE Predicted protein OS=Monosiga brevicollis GN=32750 PE=3 SV=1 Length = 909
Score = 40.8 bits (94), Expect = 0.047 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%) Frame = -1
Query: 490 LPLS-SICLCRSL-MTFSRSSNSPWSASIVISNSLALVLQLSRSIMSCICLAYSLTCRIT 317 LP+S S+C+C S+ ++ S + S S+ +S SL+L L L S+ +CL+ SL+ ++ Sbjct: 93 LPVSLSLCVCLSVSLSLCLSLSLSLSLSLSLSLSLSLSLSLCLSVSLSLCLSVSLSLCLS 152
Query: 316 SSFNYQSSFCVS---CFDVSAKLLVYLLAVSC 230 S S C+S C VS L + L C Sbjct: 153 LSLCLSVSLCLSLSLCLSVSLSLCLSLSLSLC 184
Score = 37.7 bits (86), Expect = 0.40 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%) Frame = -1
Query: 478 SICLCRSL-MTFSRSSNSPWSASIVISNSLALVLQLSRSIMSCICLAYSLTCRITSSFNY 302 S+CL SL + S S + S S+ +S SL+L + LS + +CL+ SL+ ++ S + Sbjct: 182 SLCLSVSLSLCLSVSLSLCLSVSLCLSVSLSLSVSLSLCLSLSLCLSVSLSLCLSVSLSL 241
Query: 301 QSSFCVS---CFDVSAKLLVYL-LAVS 233 S C+S C VS L + L L+VS Sbjct: 242 SVSLCLSVSLCLSVSLSLCLSLCLSVS 268
Score = 34.3 bits (77), Expect = 4.4 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%) Frame = -1
Query: 478 SICLCRSL-MTFSRSSNSPWSASIVISNSLALVLQLSRSIMSCICLAYSLTCRITSSFNY 302 S+CL SL ++ S S S S+ +S SL+L L +S S+ CL+ SL ++ S + Sbjct: 160 SLCLSLSLCLSVSLSLCLSLSLSLCLSVSLSLCLSVSLSL----CLSVSLCLSVSLSLSV 215
Query: 301 QSSFCVS---CFDVSAKL 257 S C+S C VS L Sbjct: 216 SLSLCLSLSLCLSVSLSL 233
>tr|A3I2X7|A3I2X7_9SPHI Putative uncharacterized protein OS=Algoriphagus sp. PR1 GN=ALPR1_13934 PE=4 SV=1 Length = 208
Score = 37.7 bits (86), Expect = 0.40 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 2/85 (2%) Frame = +2
Query: 38 PQHNKTRMRHPTEDNMKFEQPREQEAEETPSTSTQQDKVKASTK--PQDNK*KRINHNHN 211 PQ N+ + + + + EQ EQ+ ++ T++DK K + P D + N N Sbjct: 85 PQENQDQQQKDQNEQGEGEQSEEQQQQKDQGEKTEEDKAKEGQEGDPSDQTQDDVGENAN 144
Query: 212 GNTNEPA*HRQKIHKQFCRNIKATN 286 + RQK ++F +KA N Sbjct: 145 DQKDANLADRQKALEEFKEKLKAMN 169
>tr|B6KE46|B6KE46_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49 GN=TGME49_024340 PE=4 SV=1 Length = 266
Score = 37.4 bits (85), Expect = 0.52 Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Frame = -1
Query: 481 SSICLCRSLMTFSR-SSNSPWSASIVISNSLALVLQLSRSIMSCICLAYSLTCRITSSFN 305 SS LC S FSR +S+SP S S +S+S +L RS SC C +S R SS N Sbjct: 55 SSALLCSSFSPFSRLASSSPSSVSSSVSSSSSL-----RSRSSCSCSPFSGRGRSGSSPN 109
Query: 304 YQSSFCVSCFDVSAKLL 254 S+ C S S ++ Sbjct: 110 AVSAACASLSPASPSVV 126
>tr|A9V0V5|A9V0V5_MONBE Predicted protein OS=Monosiga brevicollis GN=25924 PE=4 SV=1 Length = 281
Score = 37.4 bits (85), Expect = 0.52 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 6/89 (6%) Frame = -1
Query: 478 SICLCRSL-MTFSRSSNSPWSASIVISNSLALVLQLSRSIMSCICLAYSLTCRITSSFNY 302 S+ L SL ++ S S + S S+ +S SL+L L LS S+ C+CL L ++ S + Sbjct: 72 SLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSMSLCLCLCLCLCLCLSVSLSL 131
Query: 301 QSSFCVS-----CFDVSAKLLVYLLAVSC 230 S C+S C VS + + L C Sbjct: 132 SLSVCLSLSVSVCLSVSVSVCLSLSLSVC 160
>tr|Q6FIV9|Q6FIV9_CANGA Strain CBS138 chromosome M complete sequence OS=Candida glabrata GN=CAGL0M11374g PE=4 SV=1 Length = 984
Score = 37.4 bits (85), Expect = 0.52 Identities = 20/53 (37%), Positives = 27/53 (50%) Frame = +2
Query: 26 NSPLPQHNKTRMRHPTEDNMKFEQPREQEAEETPSTSTQQDKVKASTKPQDNK 184 NS P +K + P ED++ EQP E + E T +QD S +P DNK Sbjct: 169 NSEQPTDDKQEVEQPIEDSLNAEQPAENKPEVERPTEDKQD----SEQPNDNK 217
>tr|Q1X8A3|Q1X8A3_CALJA Semenogelin I (Semenogelin I isoform a preproprotein) OS=Callithrix jacchus GN=SEMG1a PE=3 SV=1 Length = 392
Score = 36.6 bits (83), Expect = 0.89 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 11/96 (11%) Frame = +2
Query: 14 GGRGNSPL-----PQHNK------TRMRHPTEDNMKFEQPREQEAEETPSTSTQQDKVKA 160 GG +SP+ P HNK + + N+ + + +TP S Q+D+++ Sbjct: 188 GGSQSSPVLQTEDPVHNKKPETQNSLQNKGSSPNVNETKQKHSSKVQTPLCSAQEDRLQC 247
Query: 161 STKPQDNK*KRINHNHNGNTNEPA*HRQKIHKQFCR 268 +K +K N N N N+ H QK H + C+ Sbjct: 248 GSKDVFSK----NQNQTRNPNQDQEHGQKAHNRSCQ 279
>tr|Q1X8A2|Q1X8A2_CALJA Semenogelin II OS=Callithrix jacchus PE=3 SV=1 Length = 459
Score = 36.6 bits (83), Expect = 0.89 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 11/96 (11%) Frame = +2
Query: 14 GGRGNSPL-----PQHNK------TRMRHPTEDNMKFEQPREQEAEETPSTSTQQDKVKA 160 GG +SP+ P HNK + + N+ + + +TP S Q+D+++ Sbjct: 188 GGSQSSPVLQTEDPVHNKKPETQNSLQNKGSSPNVNETKQKHSSKVQTPLCSAQEDRLQC 247
Query: 161 STKPQDNK*KRINHNHNGNTNEPA*HRQKIHKQFCR 268 +K +K N N N N+ H QK H + C+ Sbjct: 248 GSKDVFSK----NQNQTRNPNQDQEHGQKAHNRSCQ 279
>tr|O62833|O62833_CALJA Semenogelin (Fragment) OS=Callithrix jacchus PE=2 SV=1 Length = 426
Score = 36.6 bits (83), Expect = 0.89 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 11/96 (11%) Frame = +2
Query: 14 GGRGNSPL-----PQHNK------TRMRHPTEDNMKFEQPREQEAEETPSTSTQQDKVKA 160 GG +SP+ P HNK + + N+ + + +TP S Q+D+++ Sbjct: 162 GGSQSSPVLQTEDPVHNKKPETQNSLQNKGSSPNVNETKQKHSSKVQTPLCSAQEDRLQC 221
Query: 161 STKPQDNK*KRINHNHNGNTNEPA*HRQKIHKQFCR 268 +K +K N N N N+ H QK H + C+ Sbjct: 222 GSKDVFSK----NQNQTRNPNQDQEHGQKAHNRSCQ 253
>tr|A4K2U4|A4K2U4_CALJA Semenogelin I isoform b preproprotein OS=Callithrix jacchus GN=SEMG1b PE=4 SV=1 Length = 459
Score = 36.6 bits (83), Expect = 0.89 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 11/96 (11%) Frame = +2
Query: 14 GGRGNSPL-----PQHNK------TRMRHPTEDNMKFEQPREQEAEETPSTSTQQDKVKA 160 GG +SP+ P HNK + + N+ + + +TP S Q+D+++ Sbjct: 188 GGSQSSPVLQTEDPVHNKKPETQNSLQNKGSSPNVNETKQKHSSKVQTPLCSAQEDRLQC 247
Query: 161 STKPQDNK*KRINHNHNGNTNEPA*HRQKIHKQFCR 268 +K +K N N N N+ H QK H + C+ Sbjct: 248 GSKDVFSK----NQNQTRNPNQDQEHGQKAHNRSCQ 279
>tr|O96239|O96239_PLAF7 DNA helicase, putative OS=Plasmodium falciparum (isolate 3D7) GN=PFB0730w PE=4 SV=1 Length = 1997
Score = 36.6 bits (83), Expect = 0.89 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 11/102 (10%) Frame = +2
Query: 50 KTRMRHPTEDNMKFEQPREQEAEETPSTSTQQDKVKASTKPQDNK*KR----INHNHNGN 217 K + ED+ + ++ R +E ++ +DK K K ++ + KR N+N+NG Sbjct: 1587 KEKKEEEGEDDEENQRDRNKEEDQDEDKDDDKDKDKDKDKEEEEEKKRKHILNNNNNNGI 1646
Query: 218 TNEPA*H---RQKIHKQFCRN----IKATNTE*RLVIKRRSD 322 N + + ++KI ++C N +K +N RL+ KR+ D Sbjct: 1647 QNGSSINEGVKEKILDEYCNNNTKCVKVSNE--RLIFKRKHD 1686
|