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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913708
Clone id YMU001_000033_D05
Library
Length 284
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000033_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTGTGATTACAAGCACTGATGACTATCATAAAAAGAGAAAATACCCAAAAACAGAGGTCA
CCCATTGCAGTAGCCCATTTGATTCCTCACCTTTAGAAAGAAAAAACCACAGTGAACATA
CTAGGCACAGACACAAACACTCCATCTCTGGTTGCATATCCCTTGACTCTCTCGCGAATA
TCAATAATAAAGCTCTGTTTCAAGCACTCGTGCATACAAAATCCTGACAAGGCCTGTAGA
AATCAGCTGCTTGTAAGCACAGAATGACTCGCAAAATGGCTCAA
■■Homology search results ■■ -
sp_hit_id Q96L73
Definition sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific OS=Homo sapiens
Align length 87
Score (bit) 33.1
E-value 0.44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913708|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_D05.
         (284 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysi...    33   0.44 
sp|P47950|CYT4_NEUCR Mitochondrial protein cyt-4 OS=Neurospora c...    32   1.3  
sp|P23975|SC6A2_HUMAN Sodium-dependent noradrenaline transporter...    30   4.9  
sp|O55192|SC6A2_MOUSE Sodium-dependent noradrenaline transporter...    29   6.3  
sp|Q91120|GTHB1_MORSA Gonadotropin subunit beta-1 OS=Morone saxa...    29   6.3  
sp|Q9LIR3|FB181_ARATH Putative F-box protein At3g23950 OS=Arabid...    29   6.3  

>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3
           lysine-36 and H4 lysine-20 specific OS=Homo sapiens
           GN=NSD1 PE=1 SV=1
          Length = 2696

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
 Frame = +3

Query: 33  KRKYPKTEVTHCS-SPFDSSPLERKNHSEHTRHR--HKHSISGCISLDSLANINNKALFQ 203
           K   P TE +  + S   +S L  K  S+ T      K ++S  IS ++ + I   A  Q
Sbjct: 717 KSAEPGTETSQVNLSDLKASTLVHKPQSDFTNDALSPKFNLSSSISSEN-SLIKGGAANQ 775

Query: 204 ALVHTKS*QGL*KSAACKHRMTRKMAQ 284
           AL+H+KS Q   +S  CKH+    MA+
Sbjct: 776 ALLHSKSKQPKFRSIKCKHKENPVMAE 802


>sp|P47950|CYT4_NEUCR Mitochondrial protein cyt-4 OS=Neurospora crassa
            GN=cyt-4 PE=3 SV=1
          Length = 1117

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = +3

Query: 3    VITSTDDYHKKRKYPKTEVTHCSSPFDSSPLERKNHSEHTRHRHKHSISGCISLDSLANI 182
            VI   D YH K      +      PF +S LE K    H R R +H+        +LANI
Sbjct: 931  VIRKFDKYHLKPPMDDKQAARLGLPFTASHLENKVF-PHLRVRERHA-------KTLANI 982

Query: 183  N--NKALFQALV 212
            +  N+ + QALV
Sbjct: 983  DGRNELILQALV 994


>sp|P23975|SC6A2_HUMAN Sodium-dependent noradrenaline transporter
           OS=Homo sapiens GN=SLC6A2 PE=1 SV=1
          Length = 617

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = -2

Query: 136 LCLCL---VCSLWFFLSKGEESNGLLQWVTSVFGYFL 35
           L LCL   V  L+F L KG +++G + W+T+   YF+
Sbjct: 237 LLLCLMVVVIVLYFSLWKGVKTSGKVVWITATLPYFV 273


>sp|O55192|SC6A2_MOUSE Sodium-dependent noradrenaline transporter
           OS=Mus musculus GN=Slc6a2 PE=2 SV=1
          Length = 617

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -2

Query: 136 LCLCLVCS-LWFFLSKGEESNGLLQWVTSVFGYFL 35
           LCL +V   L+F L KG +++G + W+T+   YF+
Sbjct: 239 LCLMVVIVVLYFSLWKGVKTSGKVVWITATLPYFV 273


>sp|Q91120|GTHB1_MORSA Gonadotropin subunit beta-1 OS=Morone
           saxatilis GN=cgba PE=2 SV=2
          Length = 120

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
 Frame = -3

Query: 249 QLISTGLVRILYARVLETELYY*-------YSRESQGICNQRWS 139
           Q+ S GL  ++Y  + E + Y+        Y R  Q ICN  WS
Sbjct: 31  QVESCGLTEVIYTTICEGQCYHEDLVYISHYERPEQRICNGDWS 74


>sp|Q9LIR3|FB181_ARATH Putative F-box protein At3g23950
           OS=Arabidopsis thaliana GN=At3g23950 PE=4 SV=1
          Length = 418

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 127 CLVCSLWFFLSKGEESNGLLQWVTSVFGYFL 35
           CL  + WF   K    NG+L W++++ G FL
Sbjct: 202 CLHSAYWFSHHKSIALNGILHWLSNLTGSFL 232
tr_hit_id A0FH77
Definition tr|A0FH77|A0FH77_THEHA Sodium/hydrogen exchanger OS=Thellungiella halophila
Align length 53
Score (bit) 33.9
E-value 4.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913708|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_D05.
         (284 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A0FH77|A0FH77_THEHA Sodium/hydrogen exchanger OS=Thellungiell...    34   4.2  
tr|Q1HFQ0|Q1HFQ0_THEHA Sodium/hydrogen exchanger OS=Thellungiell...    33   5.5  
tr|Q0V358|Q0V358_PHANO Putative uncharacterized protein OS=Phaeo...    33   5.5  
tr|Q96MN8|Q96MN8_HUMAN cDNA FLJ32105 fis, clone OCBBF2001402, mo...    33   7.2  
tr|A4QPE5|A4QPE5_HUMAN NSD1 protein OS=Homo sapiens GN=NSD1 PE=2...    33   7.2  
tr|Q4S7E8|Q4S7E8_TETNG Chromosome 13 SCAF14715, whole genome sho...    33   9.3  
tr|A2DLM7|A2DLM7_TRIVA Putative uncharacterized protein OS=Trich...    33   9.3  
tr|Q8NB95|Q8NB95_HUMAN cDNA FLJ34039 fis, clone FCBBF2005658, mo...    33   9.3  

>tr|A0FH77|A0FH77_THEHA Sodium/hydrogen exchanger OS=Thellungiella
           halophila GN=NHX1 PE=3 SV=1
          Length = 545

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +1

Query: 70  VAHLIPHL*KEKTTVNILGTDTNTPSLVAYPLTLSRISIIKLCFKHSCIQNPD 228
           + HL+PH   +K T ++L  D NTP  +  PL L + S I+    H+ +  PD
Sbjct: 445 IRHLLPH---QKATTSMLSDDNNTPKSIQIPL-LDQDSFIEFAGNHN-VPRPD 492


>tr|Q1HFQ0|Q1HFQ0_THEHA Sodium/hydrogen exchanger OS=Thellungiella
           halophila GN=NHX1 PE=2 SV=1
          Length = 545

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +1

Query: 70  VAHLIPHL*KEKTTVNILGTDTNTPSLVAYPLTLSRISIIKLCFKHSCIQNPD 228
           + HL+PH   +K T ++L  D NTP  +  PL L + S I+    H+ +  PD
Sbjct: 445 IRHLLPH---QKATTSMLSGDNNTPKSIQIPL-LDQDSFIEFAGNHN-VPRPD 492


>tr|Q0V358|Q0V358_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_01556 PE=4 SV=1
          Length = 105

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
 Frame = +1

Query: 28  IKRENTQKQRSPIAVAHLIPHL*KEKTTVNILGTDTNTPSL------VAYPLTLSRISII 189
           + +EN + +R+P +V  ++      + T N +G   ++  L      + +P TL++ S  
Sbjct: 1   MSKENVESERNPSSVTTVVISNTLHRCTTNCIGGQLSSTELSKTGTKIKFPYTLTQPSYT 60

Query: 190 KLCFKHSCIQNPDKACRNQLLVSTE*LA 273
            +  +H     PD A R  L+   + +A
Sbjct: 61  CINIQHHAFAKPDLATRKCLMFEADGVA 88


>tr|Q96MN8|Q96MN8_HUMAN cDNA FLJ32105 fis, clone OCBBF2001402,
           moderately similar to Mus musculus NSD1 protein mRNA
           (Fragment) OS=Homo sapiens PE=2 SV=1
          Length = 942

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
 Frame = +3

Query: 33  KRKYPKTEVTHCS-SPFDSSPLERKNHSEHTRHR--HKHSISGCISLDSLANINNKALFQ 203
           K   P TE +  + S   +S L  K  S+ T      K ++S  IS ++ + I   A  Q
Sbjct: 365 KSAEPGTETSQVNLSDLKASTLVHKPQSDFTNDALSPKFNLSSSISSEN-SLIKGGAANQ 423

Query: 204 ALVHTKS*QGL*KSAACKHRMTRKMAQ 284
           AL+H+KS Q   +S  CKH+    MA+
Sbjct: 424 ALLHSKSKQPKFRSIKCKHKENPVMAE 450


>tr|A4QPE5|A4QPE5_HUMAN NSD1 protein OS=Homo sapiens GN=NSD1 PE=2
           SV=1
          Length = 563

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
 Frame = +3

Query: 33  KRKYPKTEVTHCS-SPFDSSPLERKNHSEHTRHR--HKHSISGCISLDSLANINNKALFQ 203
           K   P TE +  + S   +S L  K  S+ T      K ++S  IS ++ + I   A  Q
Sbjct: 448 KSAEPGTETSQVNLSDLKASTLVHKPQSDFTNDALSPKFNLSSSISSEN-SLIKGGAANQ 506

Query: 204 ALVHTKS*QGL*KSAACKHRMTRKMAQ 284
           AL+H+KS Q   +S  CKH+    MA+
Sbjct: 507 ALLHSKSKQPKFRSIKCKHKENPVMAE 533


>tr|Q4S7E8|Q4S7E8_TETNG Chromosome 13 SCAF14715, whole genome shotgun
            sequence. (Fragment) OS=Tetraodon nigroviridis
            GN=GSTENG00022813001 PE=4 SV=1
          Length = 3385

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 45   PKTEVTHCSSPFDSSPLERKNHSEHTRHRHKHSISG 152
            P+ E   CSSP DS PL+ ++HS H++     ++ G
Sbjct: 1421 PRDEPAQCSSP-DSKPLQLESHSTHSKKEADSTVDG 1455


>tr|A2DLM7|A2DLM7_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_062650 PE=4 SV=1
          Length = 176

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 12  STDDYHKKRKYPKTEVTHCSSPFDSSPLERKNHSEHTRHRHKH 140
           S DD + + +  ++  ++ SS  D  P +RK HS H  H+H H
Sbjct: 92  SDDDQYHRTETEQSSSSNSSSSEDEKPKKRK-HSHHRHHKHHH 133


>tr|Q8NB95|Q8NB95_HUMAN cDNA FLJ34039 fis, clone FCBBF2005658,
           moderately similar to Mus musculus NSD1 protein mRNA
           (Fragment) OS=Homo sapiens PE=2 SV=1
          Length = 771

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
 Frame = +3

Query: 33  KRKYPKTEVTHCS-SPFDSSPLERKNHSEHTRHR--HKHSISGCISLDSLANINNKALFQ 203
           K   P TE    + S   +S L  K  S+ T      K ++S  IS ++ + I   A  Q
Sbjct: 5   KSAEPGTETPQVNLSDLRASTLVHKPQSDFTNDALSPKFNLSSSISSEN-SLIKGGAANQ 63

Query: 204 ALVHTKS*QGL*KSAACKHRMTRKMAQ 284
           AL+H+KS Q   +S  CKH+    MA+
Sbjct: 64  ALLHSKSKQAKFRSIKCKHKENPVMAE 90