BP913710
Clone id YMU001_000033_D08
Library
Length 504
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000033_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCAATGCAACAGTTGCAGAGCTAGAGGCTGCAAGAGGTCTAGTCAAGGGCAAGGAAATTG
ACCTAGAGGAGCTTGAAAAAAGATCAGATAAGCCACTAATACAAAAGATGCAGTGGCATG
TCGCATTGCAACACGGGATGCTATGTGACCTTTTTCAACACTTCCAAGTTCTCTTCCTTT
GAGCTCGACTTATCTTCTTTAGCAGATTCAATGGCACATGACAGTGCCACATGGTATGTT
TCATGGAAGGAGTTGATCAGAATGTCCATTCTGTGAGATCCCTGGGTGAAGATTTTGGCG
GTTTTGTCTGATTATTGTCAGTGAGAAAACTTCATCCTGGTGAGATTCTTGGAATGTGTG
TTTATATCCACTTGTTTAATTAAAGGTCGTGTGGTGACGAGTCATGGTTGTATGCAACTC
GTATATTGGAATGTACAAGAGCTCTTGGTGAACATTGGGTCATGAGGGCCGATATGATGT
GCTGATTAGCATCATAGTAGGACA
■■Homology search results ■■ -
sp_hit_id Q6FJ54
Definition sp|Q6FJ54|BUD4_CANGA Bud site selection protein 4 OS=Candida glabrata
Align length 51
Score (bit) 32.7
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913710|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_D08.
(504 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6FJ54|BUD4_CANGA Bud site selection protein 4 OS=Candida gla... 33 1.00
sp|Q0JMV4|AMYC1_ORYSJ Alpha-amylase isozyme C OS=Oryza sativa su... 32 2.2
sp|Q2SK06|MLTF_HAHCH Membrane-bound lytic murein transglycosylas... 31 2.9
sp|A2WPU3|AMYC1_ORYSI Alpha-amylase isozyme C OS=Oryza sativa su... 31 2.9
sp|Q8AWA7|K1C11_LAMFL Keratin, type 1 cytoskeletal 11 OS=Lampetr... 30 8.3
sp|A7TM88|BUD4_VANPO Bud site selection protein 4 OS=Vanderwalto... 30 8.4

>sp|Q6FJ54|BUD4_CANGA Bud site selection protein 4 OS=Candida glabrata
GN=BUD4 PE=3 SV=1
Length = 1446

Score = 32.7 bits (73), Expect = 1.00
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1

Query: 139 CYVTFFNTSKFSSFELDLSSLADSMAHDSATWYVSWKELIRMSIL*DPWVK 291
C+ F+ + +F D SSLAD + WY+ KE++ ++ PWVK
Sbjct: 1391 CFQLVFDDGEVITFS-DESSLADEQS-----WYMKLKEVVELNAFHQPWVK 1435


>sp|Q0JMV4|AMYC1_ORYSJ Alpha-amylase isozyme C OS=Oryza sativa
subsp. japonica GN=AMY1B PE=2 SV=1
Length = 348

Score = 31.6 bits (70), Expect = 2.2
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = -1

Query: 411 TTMTRHHTTFN*TSGYKHTFQESHQDEVFSLTIIRQNRQNLHPGISQNGHSDQLLP 244
TT +H T N Y H F +DE+ L IR NRQ +HP G LLP
Sbjct: 296 TTFVDNHDTGNPCIFYDHFFDWGLKDEIERLVSIR-NRQGIHPA---RGRCCWLLP 347


>sp|Q2SK06|MLTF_HAHCH Membrane-bound lytic murein transglycosylase F
OS=Hahella chejuensis (strain KCTC 2396) GN=mltF PE=3
SV=1
Length = 509

Score = 31.2 bits (69), Expect = 2.9
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3

Query: 3 NATVAELEAARGLVKGKEIDLEE-LEKRSDKPLIQKMQWHVALQHG 137
N + LE AR L K + +D ++ ++ + PL+Q+ +W+V ++G
Sbjct: 398 NVGLGHLEDARALAKAQGLDQDKWIDVKQALPLLQQKKWYVKTRYG 443


>sp|A2WPU3|AMYC1_ORYSI Alpha-amylase isozyme C OS=Oryza sativa
subsp. indica GN=AMYC PE=3 SV=2
Length = 348

Score = 31.2 bits (69), Expect = 2.9
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -1

Query: 411 TTMTRHHTTFN*TSGYKHTFQESHQDEVFSLTIIRQNRQNLHP 283
TT +H T N Y H F +DE+ L IR NRQ +HP
Sbjct: 296 TTFVDNHDTGNPCIFYDHFFDWGLKDEIERLVSIR-NRQGIHP 337


>sp|Q8AWA7|K1C11_LAMFL Keratin, type 1 cytoskeletal 11 OS=Lampetra
fluviatilis PE=2 SV=1
Length = 482

Score = 29.6 bits (65), Expect = 8.3
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 7/60 (11%)
Frame = +3

Query: 15 AELEAARGLVKGKEIDLEELEKRSDKPL------IQKMQWHVA-LQHGMLCDLFQHFQVL 173
AEL++ RGL++ E L++ E+R+ + L IQ+++ ++ L+HG+ L ++ +L
Sbjct: 323 AELDSLRGLIRSLEDQLQDTEERNARDLSTYTMQIQRLEGELSNLRHGINQQLKEYADLL 382


>sp|A7TM88|BUD4_VANPO Bud site selection protein 4 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=BUD4 PE=3
SV=1
Length = 1378

Score = 29.6 bits (65), Expect = 8.4
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1

Query: 103 KRCSGMSHCNTGCYVTFFNTSKFSSFELDLSSL-ADSMAHDSATWYVSWKELIRMSIL*D 279
K+ SG S N +V F + + ++ +L AD+ A + WY K+ + ++I
Sbjct: 1304 KQRSGNSKRNFTDHVLFGGCIQLVFTDEEVINLYADTSAQEKIEWYSKLKKTVDLNICHQ 1363

Query: 280 PWVKILA 300
PWV LA
Sbjct: 1364 PWVTKLA 1370


tr_hit_id A9TNT7
Definition tr|A9TNT7|A9TNT7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 35
Score (bit) 38.5
E-value 0.031
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913710|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_D08.
(504 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TNT7|A9TNT7_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.031
tr|B8A2F5|B8A2F5_MAIZE Putative uncharacterized protein OS=Zea m... 35 0.086
tr|B6TUM9|B6TUM9_MAIZE PRPK OS=Zea mays PE=2 SV=1 35 0.086
tr|A7P9J0|A7P9J0_VITVI Chromosome chr3 scaffold_8, whole genome ... 34 0.086
tr|A5BY91|A5BY91_VITVI Putative uncharacterized protein OS=Vitis... 34 0.086
tr|Q38M68|Q38M68_SOLTU Putative uncharacterized protein OS=Solan... 34 0.14
tr|Q6NMZ4|Q6NMZ4_ARATH At4g34412 OS=Arabidopsis thaliana PE=2 SV=1 33 0.24
tr|Q9FU90|Q9FU90_ORYSJ cDNA clone:006-304-G04, full insert seque... 32 0.40
tr|B8AD73|B8AD73_ORYSI Putative uncharacterized protein OS=Oryza... 32 0.40
tr|A2ZP44|A2ZP44_ORYSJ Putative uncharacterized protein OS=Oryza... 34 4.5

>tr|A9TNT7|A9TNT7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_148302 PE=3 SV=1
Length = 174

Score = 38.5 bits (88), Expect(2) = 0.031
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3

Query: 3 NATVAELEAARGLVKGKEIDLEELEKRSDKPLIQK 107
+AT +L+A RGL++G EI+LEEL K + + LI K
Sbjct: 112 DATPEDLKATRGLIQGSEINLEELSKEASQSLILK 146



Score = 22.3 bits (46), Expect(2) = 0.031
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2

Query: 95 TNTKDAVACRIATRDAM 145
++ ++AV CRIA RD +
Sbjct: 158 SSLEEAVTCRIAARDIL 174


>tr|B8A2F5|B8A2F5_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 172

Score = 34.7 bits (78), Expect(2) = 0.086
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3

Query: 3 NATVAELEAARGLVKGKEIDLEELEKRSDKPLIQK 107
+A+ E++A L+ G EIDL ELE+R+++P I K
Sbjct: 110 DASDEEMKAVEKLISGTEIDLTELERRANQPQILK 144



Score = 24.6 bits (52), Expect(2) = 0.086
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2

Query: 107 DAVACRIATRDAM 145
DA+ CRIA RDA+
Sbjct: 160 DAIVCRIAARDAL 172


>tr|B6TUM9|B6TUM9_MAIZE PRPK OS=Zea mays PE=2 SV=1
Length = 172

Score = 34.7 bits (78), Expect(2) = 0.086
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3

Query: 3 NATVAELEAARGLVKGKEIDLEELEKRSDKPLIQK 107
+A+ E++A L+ G EIDL ELE+R+++P I K
Sbjct: 110 DASDEEMKAVEKLISGTEIDLTELERRANQPQILK 144



Score = 24.6 bits (52), Expect(2) = 0.086
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2

Query: 107 DAVACRIATRDAM 145
DA+ CRIA RDA+
Sbjct: 160 DAIVCRIAARDAL 172


>tr|A7P9J0|A7P9J0_VITVI Chromosome chr3 scaffold_8, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00036587001
PE=3 SV=1
Length = 171

Score = 34.3 bits (77), Expect(2) = 0.086
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3

Query: 3 NATVAELEAARGLVKGKEIDLEELEKRSDKPLIQK 107
N ++ E++ L+ GKEIDLEE+E R+D+ I K
Sbjct: 109 NTSLDEMKDIDKLIHGKEIDLEEMEGRADQAQIHK 143



Score = 25.0 bits (53), Expect(2) = 0.086
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2

Query: 107 DAVACRIATRDAM 145
DA+ CRIA+RDA+
Sbjct: 159 DAITCRIASRDAL 171


>tr|A5BY91|A5BY91_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_035626 PE=3 SV=1
Length = 171

Score = 34.3 bits (77), Expect(2) = 0.086
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3

Query: 3 NATVAELEAARGLVKGKEIDLEELEKRSDKPLIQK 107
N ++ E++ L+ GKEIDLEE+E R+D+ I K
Sbjct: 109 NTSLDEMKDIDKLIHGKEIDLEEMEGRADQAQIHK 143



Score = 25.0 bits (53), Expect(2) = 0.086
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2

Query: 107 DAVACRIATRDAM 145
DA+ CRIA+RDA+
Sbjct: 159 DAITCRIASRDAL 171


>tr|Q38M68|Q38M68_SOLTU Putative uncharacterized protein OS=Solanum
tuberosum PE=2 SV=1
Length = 171

Score = 33.9 bits (76), Expect(2) = 0.14
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3

Query: 6 ATVAELEAARGLVKGKEIDLEELEKRSDKPLIQK 107
A E+ A L+KG EIDL+ELE+R ++ IQK
Sbjct: 110 ALADEMVAIEKLIKGNEIDLKELEQRINQAQIQK 143



Score = 24.6 bits (52), Expect(2) = 0.14
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2

Query: 107 DAVACRIATRDAM 145
DA+ CRIA RDA+
Sbjct: 159 DAITCRIAARDAL 171


>tr|Q6NMZ4|Q6NMZ4_ARATH At4g34412 OS=Arabidopsis thaliana PE=2 SV=1
Length = 172

Score = 33.1 bits (74), Expect(2) = 0.24
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3

Query: 3 NATVAELEAARGLVKGKEIDLEELEKRSDKPLIQK 107
NA+ E+E L+ GKEIDLEEL+ +++ I K
Sbjct: 110 NASPVEMEEVAKLINGKEIDLEELKTHANQANILK 144



Score = 24.6 bits (52), Expect(2) = 0.24
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2

Query: 107 DAVACRIATRDAM 145
DA+ CRIA RDA+
Sbjct: 160 DAIVCRIAARDAL 172


>tr|Q9FU90|Q9FU90_ORYSJ cDNA clone:006-304-G04, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0019D06.12 PE=2 SV=1
Length = 172

Score = 32.3 bits (72), Expect(2) = 0.40
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3

Query: 3 NATVAELEAARGLVKGKEIDLEELEKRSDKPLIQK 107
+A+ E++A L+ G EIDL ELE R+++P I K
Sbjct: 110 DASNEEIKAVEKLICGTEIDLAELETRANQPQILK 144



Score = 24.6 bits (52), Expect(2) = 0.40
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2

Query: 107 DAVACRIATRDAM 145
DA+ CRIA RDA+
Sbjct: 160 DAIVCRIAARDAL 172


>tr|B8AD73|B8AD73_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_00341 PE=4 SV=1
Length = 172

Score = 32.3 bits (72), Expect(2) = 0.40
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3

Query: 3 NATVAELEAARGLVKGKEIDLEELEKRSDKPLIQK 107
+A+ E++A L+ G EIDL ELE R+++P I K
Sbjct: 110 DASNEEIKAVEKLICGTEIDLAELETRANQPQILK 144



Score = 24.6 bits (52), Expect(2) = 0.40
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2

Query: 107 DAVACRIATRDAM 145
DA+ CRIA RDA+
Sbjct: 160 DAIVCRIAARDAL 172


>tr|A2ZP44|A2ZP44_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_000316 PE=3 SV=1
Length = 227

Score = 33.9 bits (76), Expect = 4.5
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3

Query: 3 NATVAELEAARGLVKGKEIDLEELEKRSDKPLIQKMQWHVALQH 134
+A+ E++A L+ G EIDL ELE R+++P I K+ +H
Sbjct: 110 DASNEEIKAVEKLICGTEIDLAELETRANQPQILKICVQATCEH 153