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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915002
Clone id YMU001_000065_D03
Library
Length 491
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTGTTGATCAATATAGAGCTATTTGGCTTTTAGATGCATTGGCCGAGGAAAATCTACCAT
CCATCATCTTTACCCAACCCTCTAGTTGAGCATTCATGCTCAACAATAGCAAAACCTAGG
CAACAAAATTTGGTAGCAACACAAGCCCCACGATGGACTATATCAAAGCCAAAACCATGA
ACAGGAGATATATACAAACCGCCATATCACATTCCATCATGGAGAGCCGCCTGGATCAAA
GGGAAAGCTCCAAACTTCCCAACTTGAAGACTGGCTTCCATCTGGATCCCAAACAAATTG
AGCATTCTCTTCAAGCTTGTACCTTTAACATGAAGATCTGGAACCAAAATACAAGGGGAT
AGACAAGGTGTGCATGCCTTAGAACGGGTCCGTGGGCCCACATAAGCCAAACAGCACTCC
AAAGCTTGGGAAACTCTTGTCACACCATCATGATCAGGAGCGGTACCTTTCAAAAGGTAC
TGAAAAGCATG
■■Homology search results ■■ -
sp_hit_id O15063
Definition sp|O15063|K0355_HUMAN Uncharacterized protein KIAA0355 OS=Homo sapiens
Align length 19
Score (bit) 32.3
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915002|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_D03.
         (491 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O15063|K0355_HUMAN Uncharacterized protein KIAA0355 OS=Homo s...    32   1.2  
sp|Q46646|HRCR_ERWAM Harpin secretion protein hrcR OS=Erwinia am...    30   5.9  
sp|Q2JK10|MEND_SYNJB 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cycloh...    30   7.8  
sp|P10105|LAB_DROME Homeotic protein labial OS=Drosophila melano...    30   7.8  
sp|P15541|AMPN_RABIT Aminopeptidase N OS=Oryctolagus cuniculus G...    30   7.8  

>sp|O15063|K0355_HUMAN Uncharacterized protein KIAA0355 OS=Homo
           sapiens GN=KIAA0355 PE=1 SV=2
          Length = 1070

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 264 LKTGFHLDPKQIEHSLQAC 320
           +K GFHL+PK IE SLQ C
Sbjct: 298 MKAGFHLNPKAIEASLQGC 316


>sp|Q46646|HRCR_ERWAM Harpin secretion protein hrcR OS=Erwinia
           amylovora GN=hrcR PE=3 SV=2
          Length = 217

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = -2

Query: 193 IYLLFMVLALI*SIVGLVLLPNFVA*VLLLLSMNAQL----EGWVKMMDGRFSS 44
           IY+ F+V+ LI S V L L    VA + L L +   L     GW +++DG F S
Sbjct: 162 IYIPFIVIDLIVSNVLLALGMQMVAPMTLSLPLKMLLFVLINGWTRLLDGLFYS 215


>sp|Q2JK10|MEND_SYNJB
           2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
           carboxylate synthase OS=Synechococcus sp. GN=menD PE=3
           SV=1
          Length = 608

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +1

Query: 40  WPRKIYHPSSLPNPLVEHSCSTIAKPRQQNLVATQAPRWTISKPKP*TGD-IYKPPYHIP 216
           WP ++    SLP           +K  +Q L A  APR     P+P  GD ++ P  H+P
Sbjct: 314 WPEQVIQLGSLPT----------SKALRQTL-AKVAPRVWRLDPRPDNGDPLHNPTTHLP 362

Query: 217 SWRAAWIKG 243
                W+ G
Sbjct: 363 FAVEEWVAG 371


>sp|P10105|LAB_DROME Homeotic protein labial OS=Drosophila
           melanogaster GN=lab PE=1 SV=2
          Length = 635

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +2

Query: 137 QHKPHDGLYQSQNHEQEIYTNRHITF--HHGEPPGSKGKLQTSQL 265
           QH+PH  L Q Q H+      +H+T+  +    PG+    Q +QL
Sbjct: 43  QHQPHLQLQQQQQHQHLQQPQQHLTYNGYESSSPGNYYPQQQAQL 87


>sp|P15541|AMPN_RABIT Aminopeptidase N OS=Oryctolagus cuniculus
            GN=ANPEP PE=1 SV=4
          Length = 966

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 26/88 (29%), Positives = 39/88 (44%)
 Frame = +3

Query: 93   FMLNNSKT*ATKFGSNTSPTMDYIKAKTMNRRYIQTAISHSIMESRLDQRESSKLPNLKT 272
            F+ +N K     FG  +    + I+A T  RR+          E  L Q E  +L NL T
Sbjct: 878  FVQSNWKKLFEDFGGGSFSFANLIRAVT--RRFST--------EYELQQLEQFRLNNLDT 927

Query: 273  GFHLDPKQIEHSLQACTFNMKIWNQNTR 356
            GF    + +E +L+    N+K W Q  +
Sbjct: 928  GFGSGTRALEQALEQTRANIK-WVQENK 954
tr_hit_id Q5N7K2
Definition tr|Q5N7K2|Q5N7K2_ORYSJ Zinc finger protein-like (Os01g0689300 protein) OS=Oryza sativa subsp. japonica
Align length 36
Score (bit) 36.2
E-value 0.84
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915002|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_D03.
         (491 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5N7K2|Q5N7K2_ORYSJ Zinc finger protein-like (Os01g0689300 pr...    36   0.84 
tr|A2ZWQ2|A2ZWQ2_ORYSJ Putative uncharacterized protein OS=Oryza...    36   0.84 
tr|A4VE67|A4VE67_TETTH Putative uncharacterized protein OS=Tetra...    35   2.4  
tr|B6VNY0|B6VNY0_9BACT Reverse dissimilatory sulfite reductase a...    34   3.2  
tr|Q4ZR91|Q4ZR91_PSEU2 Regulatory protein, LuxR:Response regulat...    33   7.1  
tr|Q48GV3|Q48GV3_PSE14 DNA-binding response regulator, LuxR fami...    33   7.1  
tr|A6KWL7|A6KWL7_BACV8 tRNA delta(2)-isopentenylpyrophosphate tr...    33   7.1  
tr|A4JW81|A4JW81_BURVG Zeta toxin family protein OS=Burkholderia...    33   7.1  
tr|A8W6Y8|A8W6Y8_9BACT Dissimilatory sulfite reductase (Fragment...    33   7.1  
tr|Q0V6J1|Q0V6J1_PHANO Putative uncharacterized protein OS=Phaeo...    33   7.1  
tr|A6XK61|A6XK61_9NEOB Tensin 3 (Fragment) OS=Isthmohyla zeteki ...    33   9.3  
tr|A6XK54|A6XK54_9NEOB Tensin 3 (Fragment) OS=Smilisca puma GN=T...    33   9.3  
tr|B2IFM7|B2IFM7_BEII9 Nucleotidyl transferase OS=Beijerinckia i...    33   9.3  

>tr|Q5N7K2|Q5N7K2_ORYSJ Zinc finger protein-like (Os01g0689300
            protein) OS=Oryza sativa subsp. japonica GN=P0519D04.45
            PE=4 SV=1
          Length = 1242

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -1

Query: 182  VHGFGFDIVHRGACVATKFCCLGFAIVEHECSTRGL 75
            VHG G D  H   C     CCLG  + EH+C  +GL
Sbjct: 1041 VHGLGVDFFHCMKCN----CCLGMKLTEHKCREKGL 1072


>tr|A2ZWQ2|A2ZWQ2_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_002974 PE=4 SV=1
          Length = 1167

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -1

Query: 182  VHGFGFDIVHRGACVATKFCCLGFAIVEHECSTRGL 75
            VHG G D  H   C     CCLG  + EH+C  +GL
Sbjct: 1053 VHGLGVDFFHCMKCN----CCLGMKLTEHKCREKGL 1084


>tr|A4VE67|A4VE67_TETTH Putative uncharacterized protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_00295979 PE=4
           SV=1
          Length = 219

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 276 FHLDPKQIEHSLQACTFNMKIWNQ 347
           +HL  KQ++HS Q C F++ +WNQ
Sbjct: 184 YHLSIKQVDHSYQFCRFSIFLWNQ 207


>tr|B6VNY0|B6VNY0_9BACT Reverse dissimilatory sulfite reductase
           alpha subunit (Fragment) OS=uncultured marine bacterium
           GN=rDsrA PE=4 SV=1
          Length = 351

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 194 YISPVHGFGFDIVHRGACVATKFCCLGFAIVEHECS 87
           +   V+ +G+D+   G CV T   C+G A  EH C+
Sbjct: 83  FFDKVNAYGWDLGGAGPCVRTAMACVGAARCEHSCA 118


>tr|Q4ZR91|Q4ZR91_PSEU2 Regulatory protein, LuxR:Response regulator
           receiver OS=Pseudomonas syringae pv. syringae (strain
           B728a) GN=Psyr_3299 PE=4 SV=1
          Length = 220

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 180 NRRYIQTAISHSIMESRLDQRESSKLPNLKTGFHLDPKQIE 302
           N RY+   I+H+++E  L  + S +  + K  +HL  +Q+E
Sbjct: 122 NERYLSPGIAHTVIERALRGKRSDRARSAKERYHLTARQLE 162


>tr|Q48GV3|Q48GV3_PSE14 DNA-binding response regulator, LuxR family
           OS=Pseudomonas syringae pv. phaseolicola (strain 1448A /
           Race 6) GN=PSPPH_3220 PE=4 SV=1
          Length = 220

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 162 IKAKTMNRRYIQTAISHSIMESRLDQRESSKLPNLKTGFHLDPKQIE 302
           ++A   N RY+  AI+H+++E  L    S +    K  +HL  +Q+E
Sbjct: 116 LEALRNNERYLSPAIAHTVIERALRGTRSDRARAAKERYHLTARQLE 162


>tr|A6KWL7|A6KWL7_BACV8 tRNA delta(2)-isopentenylpyrophosphate
           transferase OS=Bacteroides vulgatus (strain ATCC 8482 /
           DSM 1447 / NCTC 11154) GN=BVU_0101 PE=3 SV=1
          Length = 300

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = +3

Query: 132 GSNTSPTMDYIKAKTMNRRYIQTAISHSIMESRLDQRESSKLPNLKTGFHLDPKQIEHSL 311
           G +  PT+D    + M RRY Q  +     E RL   E  K+ +LK     +PK++ H+L
Sbjct: 111 GIDDIPTVDNETRQLMLRRYEQEGLDTLCAELRLLDPEYYKIVDLK-----NPKRVIHAL 165

Query: 312 QACTFNMKIW 341
           + C    K +
Sbjct: 166 EICYMTGKTY 175


>tr|A4JW81|A4JW81_BURVG Zeta toxin family protein OS=Burkholderia
           vietnamiensis (strain G4 / LMG 22486) GN=Bcep1808_7664
           PE=4 SV=1
          Length = 513

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +2

Query: 167 SQNHEQEIYTNRHITFHHGEPPGSKGKLQTSQLEDWLPS 283
           ++N ++ IY NR +  H  +PP  + ++   +  DW P+
Sbjct: 414 ARNSDEPIYDNRLVAGHWEQPPAGRERVDAERARDWSPA 452


>tr|A8W6Y8|A8W6Y8_9BACT Dissimilatory sulfite reductase (Fragment)
           OS=uncultured bacterium GN=dsrA PE=4 SV=1
          Length = 179

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 176 GFGFDIVHRGACVATKFCCLGFAIVEHEC 90
           G GFD+   G+C+ T  CC+G+A  E  C
Sbjct: 67  GEGFDLGGSGSCMRTPSCCVGYARCEWAC 95


>tr|Q0V6J1|Q0V6J1_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_00373 PE=4 SV=2
          Length = 639

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = +1

Query: 61  PSSLPNPLVEHSCSTIAKPRQQNLVATQAPRWTISKPKP*TGDIYKPPYHIPSWRAAWIK 240
           P++ P P  +   S+ A P QQ++  +QAP+          G  Y PP H P  +  + +
Sbjct: 405 PAAHPEPTSQIGYSSYAPPSQQHMPPSQAPQH--------NGSAYSPPAHNPHSQPDYPR 456

Query: 241 GKA 249
           G A
Sbjct: 457 GPA 459