BP915078 |
Clone id |
YMU001_000066_C04 |
Library |
YMU01 |
Length |
540 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000066_C04. |
Accession |
BP915078 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1965Contig1 |
Sequence |
ATTACCATTAAGTGGCTGGTTTTGAAGGACTGCTTTCAAGTAGCTTCTGTGAATCCATCT GGCATCCTCAAGCTCCTTTGTGTCAACTGCAATTGTAGGAAGTTTTGTGTTCTCCATTAA CACACGGAGTCCCTCGTTGCCGACTGGTACAACATCATCGACGAACTTAGGAAAGCTTAA TTGTTTCTCTTCAGCCTCAGCCATGAACCCCACCATTAGTGATTGAGGAAATGGCCAAAG CTGGCTCGCAATATACCTCAATCCGTCAAGTTTCACTTTTATTCCAGACTCTTCTTGTAT CTCCCTTGCAGCCGCTGTTTCAAAAGTCTCTCCAACCTCTACAAATCCTGCCAATAAGGA ATATCGGCCTGGCTTCCATCTGCTCTGTCTGCCCAGAAGAAGATATTCTCCACAAGTGAC AAGCACTATGACTGCTGGATCCAGACGAGGATATATAGAACTTCCACACTCTCTAAAGGA GCACTGTAAGCTATGGCCACCTTCCTTGAACTCCATTTCTCCACCGCAACAGGAACAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A4VLQ5 |
Definition |
sp|A4VLQ5|NUDC_PSEU5 NADH pyrophosphatase OS=Pseudomonas stutzeri (strain A1501) |
Align length |
177 |
Score (bit) |
117.0 |
E-value |
4.0e-26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4SLD0 |
Definition |
tr|B4SLD0|B4SLD0_STRM5 NUDIX hydrolase OS=Stenotrophomonas maltophilia (strain R551-3) |
Align length |
172 |
Score (bit) |
129.0 |
E-value |
8.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915078|Adiantum capillus-veneris mRNA, clone: YMU001_000066_C04. (540 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4SLD0|B4SLD0_STRM5 NUDIX hydrolase OS=Stenotrophomonas malto... 129 8e-29 tr|B2FJT3|B2FJT3_STRMK Putative NADH PYROPHOSPHATASE OS=Stenotro... 129 1e-28 tr|B8L826|B8L826_9GAMM NADH pyrophosphatase nudc OS=Stenotrophom... 129 1e-28 tr|A9EI02|A9EI02_9RHOB Hydrolase, NUDIX family protein OS=Phaeob... 128 2e-28 tr|Q3BY95|Q3BY95_XANC5 NUDIX hydrolase family protein OS=Xanthom... 127 4e-28 tr|A9FY22|A9FY22_9RHOB Hydrolase, putative OS=Phaeobacter gallae... 127 4e-28 tr|Q5H5I9|Q5H5I9_XANOR NADH pyrophosphatase OS=Xanthomonas oryza... 127 5e-28 tr|Q2P881|Q2P881_XANOM NADH pyrophosphatase OS=Xanthomonas oryza... 127 5e-28 tr|B2SRC1|B2SRC1_XANOP NADH pyrophosphatase OS=Xanthomonas oryza... 127 5e-28 tr|A9VAN3|A9VAN3_MONBE Predicted protein OS=Monosiga brevicollis... 127 5e-28 tr|Q8PQ29|Q8PQ29_XANAC NADH pyrophosphatase OS=Xanthomonas axono... 126 6e-28 tr|Q2W3S7|Q2W3S7_MAGMM NTP pyrophosphohydrolase OS=Magnetospiril... 126 6e-28 tr|Q3IIM4|Q3IIM4_PSEHT Putative NTP pyrophosphatase OS=Pseudoalt... 126 8e-28 tr|B0RN16|B0RN16_XANCB NAD(+) diphosphatase OS=Xanthomonas campe... 126 8e-28 tr|B8II16|B8II16_METNO NUDIX hydrolase OS=Methylobacterium nodul... 124 2e-27 tr|A8TIJ0|A8TIJ0_9PROT NUDIX hydrolase OS=alpha proteobacterium ... 124 2e-27 tr|A4CBP6|A4CBP6_9GAMM Putative NTP pyrophosphatase OS=Pseudoalt... 124 2e-27 tr|Q2G9R6|Q2G9R6_NOVAD NUDIX hydrolase OS=Novosphingobium aromat... 124 3e-27 tr|Q8PD56|Q8PD56_XANCP NADH pyrophosphatase OS=Xanthomonas campe... 124 4e-27 tr|Q4UZE1|Q4UZE1_XANC8 NADH pyrophosphatase OS=Xanthomonas campe... 124 4e-27 tr|Q0ASL1|Q0ASL1_MARMM NUDIX hydrolase OS=Maricaulis maris (stra... 124 4e-27 tr|A0Y4W8|A0Y4W8_9GAMM Putative NTP pyrophosphatase OS=Alteromon... 124 4e-27 tr|B0UQ28|B0UQ28_METS4 NUDIX hydrolase OS=Methylobacterium sp. (... 123 5e-27 tr|A4RSL8|A4RSL8_OSTLU Predicted protein OS=Ostreococcus lucimar... 123 5e-27 tr|A4U4X3|A4U4X3_9PROT Predicted NTP pyrophosphohydrolase contai... 123 7e-27 tr|B1W1E3|B1W1E3_STRGG Putative uncharacterized protein OS=Strep... 122 9e-27 tr|A0LI51|A0LI51_SYNFM NUDIX hydrolase OS=Syntrophobacter fumaro... 122 2e-26 tr|Q1YTC1|Q1YTC1_9GAMM Phosphohydrolase OS=gamma proteobacterium... 121 2e-26 tr|Q82IQ9|Q82IQ9_STRAW Putative uncharacterized protein OS=Strep... 121 3e-26 tr|B5GJP2|B5GJP2_9ACTO Putative uncharacterized protein OS=Strep... 121 3e-26
>tr|B4SLD0|B4SLD0_STRM5 NUDIX hydrolase OS=Stenotrophomonas maltophilia (strain R551-3) GN=Smal_3700 PE=4 SV=1 Length = 301
Score = 129 bits (325), Expect = 8e-29 Identities = 75/172 (43%), Positives = 94/172 (54%) Frame = -1
Query: 540 FCSCCGGEMEFKEGGHSLQCSFRECGSSIYPRLDPAVIVLVTCGEYLLLGRQSRWKPGRY 361 FC CGG + F GG +C+ +C + YPR+DPAVIV V LLLGRQS W P RY Sbjct: 131 FCGVCGGAVAFSRGGFVGRCA--QCSTEHYPRVDPAVIVAVENQGRLLLGRQSNWAPRRY 188
Query: 360 SLLAGFVEVGETFETAAAREIQEESGIKVKLDGLRYIASQLWPFPQSLMVGFMAEAEEKQ 181 S+LAGFVE GETFE RE+ EES KV++ +Y+ SQ WPFP +LM+GF A+A++ Sbjct: 189 SVLAGFVEPGETFEQTVVREVHEES--KVRVSACQYLGSQPWPFPGALMIGFRAQAQD-- 244
Query: 180 LSFPKFVDDVVPVGNEGLRVLMENTKLPTIAVDTKELEDARWIHRSYLKAVL 25 LPT+ ELEDARW + A L Sbjct: 245 -------------------------DLPTV---DGELEDARWFSADEVGAAL 268
>tr|B2FJT3|B2FJT3_STRMK Putative NADH PYROPHOSPHATASE OS=Stenotrophomonas maltophilia (strain K279a) GN=nudC PE=4 SV=1 Length = 301
Score = 129 bits (324), Expect = 1e-28 Identities = 76/172 (44%), Positives = 94/172 (54%) Frame = -1
Query: 540 FCSCCGGEMEFKEGGHSLQCSFRECGSSIYPRLDPAVIVLVTCGEYLLLGRQSRWKPGRY 361 FC CGG + F GG +C+ +C + YPR+DPAVIV V LLLGRQS W P RY Sbjct: 131 FCGVCGGAVAFARGGFVGRCA--QCSTEHYPRVDPAVIVAVENQGRLLLGRQSNWAPRRY 188
Query: 360 SLLAGFVEVGETFETAAAREIQEESGIKVKLDGLRYIASQLWPFPQSLMVGFMAEAEEKQ 181 S+LAGFVE GETFE RE+ EES KV++ +Y+ SQ WPFP +LMVGF A+A++ Sbjct: 189 SVLAGFVEPGETFEQTVVREVHEES--KVRVTACQYLGSQPWPFPGALMVGFRAQAQD-- 244
Query: 180 LSFPKFVDDVVPVGNEGLRVLMENTKLPTIAVDTKELEDARWIHRSYLKAVL 25 LPT+ ELEDARW + A L Sbjct: 245 -------------------------DLPTV---DGELEDARWFSADEVGAAL 268
>tr|B8L826|B8L826_9GAMM NADH pyrophosphatase nudc OS=Stenotrophomonas sp. SKA14 GN=SSKA14_3537 PE=4 SV=1 Length = 301
Score = 129 bits (323), Expect = 1e-28 Identities = 75/172 (43%), Positives = 94/172 (54%) Frame = -1
Query: 540 FCSCCGGEMEFKEGGHSLQCSFRECGSSIYPRLDPAVIVLVTCGEYLLLGRQSRWKPGRY 361 FC CGG + F GG +C+ +C + YPR+DPAVIV V LLLGRQS W P RY Sbjct: 131 FCGVCGGAVAFARGGFVGRCA--QCSTEHYPRVDPAVIVAVENQGRLLLGRQSNWAPRRY 188
Query: 360 SLLAGFVEVGETFETAAAREIQEESGIKVKLDGLRYIASQLWPFPQSLMVGFMAEAEEKQ 181 S+LAGFVE GETFE RE+ EES KV++ +Y+ SQ WPFP +LM+GF A+A++ Sbjct: 189 SVLAGFVEPGETFEQTVVREVHEES--KVRVTACQYLGSQPWPFPGALMIGFRAQAQD-- 244
Query: 180 LSFPKFVDDVVPVGNEGLRVLMENTKLPTIAVDTKELEDARWIHRSYLKAVL 25 LPT+ ELEDARW + A L Sbjct: 245 -------------------------DLPTV---DGELEDARWFSADEVGAAL 268
>tr|A9EI02|A9EI02_9RHOB Hydrolase, NUDIX family protein OS=Phaeobacter gallaeciensis 2.10 GN=RG210_09627 PE=3 SV=1 Length = 334
Score = 128 bits (321), Expect = 2e-28 Identities = 63/146 (43%), Positives = 91/146 (62%), Gaps = 1/146 (0%) Frame = -1
Query: 540 FCSCCGGEMEFKEGGHSLQCSFRECGSSIYPRLDPAVIVLVTCGEYLLLGRQSRWKPGRY 361 +C+CCG + + +GG C CG++ +PR DP VI+L+T G+ +L+GR W G Y Sbjct: 167 YCACCGAKSDIAQGGWQRVCP--SCGAAHFPRTDPVVIMLITHGDAVLVGRSPGWPDGMY 224
Query: 360 SLLAGFVEVGETFETAAAREIQEESGIKVKLDGLRYIASQLWPFPQSLMVGFMAEAEEKQ 181 SLLAGFVE GET E A RE EE+G+KV + Y++SQ WPFP SLM G EA ++ Sbjct: 225 SLLAGFVEPGETLEAAVRRETAEETGVKV--GAVSYLSSQPWPFPMSLMFGCAGEALGRE 282
Query: 180 LSF-PKFVDDVVPVGNEGLRVLMENT 106 ++ PK ++D + V + + + E T Sbjct: 283 ITIDPKEIEDAIWVSRQDMMAIFEGT 308
>tr|Q3BY95|Q3BY95_XANC5 NUDIX hydrolase family protein OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=XCV0537 PE=3 SV=1 Length = 308
Score = 127 bits (319), Expect = 4e-28 Identities = 70/175 (40%), Positives = 97/175 (55%) Frame = -1
Query: 540 FCSCCGGEMEFKEGGHSLQCSFRECGSSIYPRLDPAVIVLVTCGEYLLLGRQSRWKPGRY 361 FC CGG + F+ G C+ +C + YPR+DPA+IV V+ G LLLGRQ+ W PGRY Sbjct: 143 FCGVCGGAIAFRRAGFIAHCT--QCQTEHYPRVDPAIIVAVSDGARLLLGRQASWAPGRY 200
Query: 360 SLLAGFVEVGETFETAAAREIQEESGIKVKLDGLRYIASQLWPFPQSLMVGFMAEAEEKQ 181 S++AGFVE GE+ E ARE+ EE+ +V + RY+ +Q WPFP +LM+GF A A Sbjct: 201 SVIAGFVEPGESLEQTVAREVFEET--RVHVQDCRYLGAQPWPFPGALMLGFTARAAA-- 256
Query: 180 LSFPKFVDDVVPVGNEGLRVLMENTKLPTIAVDTKELEDARWIHRSYLKAVLQNQ 16 T++P + T ELEDARW+ + + A L + Sbjct: 257 ------------------------TEVPQV---TGELEDARWVSHAQVSAALAGE 284
>tr|A9FY22|A9FY22_9RHOB Hydrolase, putative OS=Phaeobacter gallaeciensis BS107 GN=RGBS107_03813 PE=3 SV=1 Length = 334
Score = 127 bits (319), Expect = 4e-28 Identities = 63/146 (43%), Positives = 91/146 (62%), Gaps = 1/146 (0%) Frame = -1
Query: 540 FCSCCGGEMEFKEGGHSLQCSFRECGSSIYPRLDPAVIVLVTCGEYLLLGRQSRWKPGRY 361 +C+CCG + + +GG C CG++ +PR DP VI+L+T G+ +L+GR W G Y Sbjct: 167 YCACCGAKSDMVQGGWQRVCL--SCGAAHFPRTDPVVIMLITHGDAVLVGRSPGWPDGMY 224
Query: 360 SLLAGFVEVGETFETAAAREIQEESGIKVKLDGLRYIASQLWPFPQSLMVGFMAEAEEKQ 181 SLLAGFVE GET E A RE EE+G+KV + Y++SQ WPFP SLM G EA ++ Sbjct: 225 SLLAGFVEPGETLEAAVRRETAEETGVKV--GAVSYLSSQPWPFPMSLMFGCAGEALGRE 282
Query: 180 LSF-PKFVDDVVPVGNEGLRVLMENT 106 ++ PK ++D + V + + + E T Sbjct: 283 ITIDPKEIEDAIWVSRQDMMAIFEGT 308
>tr|Q5H5I9|Q5H5I9_XANOR NADH pyrophosphatase OS=Xanthomonas oryzae pv. oryzae GN=nudC PE=4 SV=1 Length = 393
Score = 127 bits (318), Expect = 5e-28 Identities = 70/175 (40%), Positives = 96/175 (54%) Frame = -1
Query: 540 FCSCCGGEMEFKEGGHSLQCSFRECGSSIYPRLDPAVIVLVTCGEYLLLGRQSRWKPGRY 361 FC CGG + F+ G C+ C + YPR+DPA+IV V+ G LLLGRQ+ W PGRY Sbjct: 228 FCGVCGGAIAFRRAGFIAHCT--HCQTEHYPRVDPAIIVAVSDGARLLLGRQASWAPGRY 285
Query: 360 SLLAGFVEVGETFETAAAREIQEESGIKVKLDGLRYIASQLWPFPQSLMVGFMAEAEEKQ 181 S++AGFVE GE+ E ARE+ EE+ +V + RY+ +Q WPFP +LM+GF A A Sbjct: 286 SVIAGFVEPGESLEQTVAREVFEET--RVHVQDCRYLGAQPWPFPGALMLGFTARAPA-- 341
Query: 180 LSFPKFVDDVVPVGNEGLRVLMENTKLPTIAVDTKELEDARWIHRSYLKAVLQNQ 16 T++P + T ELEDARW+ + + A L + Sbjct: 342 ------------------------TEVPQV---TSELEDARWVSHAEVSAALAGE 369
>tr|Q2P881|Q2P881_XANOM NADH pyrophosphatase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=XOO0491 PE=3 SV=1 Length = 296
Score = 127 bits (318), Expect = 5e-28 Identities = 70/175 (40%), Positives = 96/175 (54%) Frame = -1
Query: 540 FCSCCGGEMEFKEGGHSLQCSFRECGSSIYPRLDPAVIVLVTCGEYLLLGRQSRWKPGRY 361 FC CGG + F+ G C+ C + YPR+DPA+IV V+ G LLLGRQ+ W PGRY Sbjct: 131 FCGVCGGAIAFRRAGFIAHCT--HCQTEHYPRVDPAIIVAVSDGARLLLGRQASWAPGRY 188
Query: 360 SLLAGFVEVGETFETAAAREIQEESGIKVKLDGLRYIASQLWPFPQSLMVGFMAEAEEKQ 181 S++AGFVE GE+ E ARE+ EE+ +V + RY+ +Q WPFP +LM+GF A A Sbjct: 189 SVIAGFVEPGESLEQTVAREVFEET--RVHVQDCRYLGAQPWPFPGALMLGFTARAPA-- 244
Query: 180 LSFPKFVDDVVPVGNEGLRVLMENTKLPTIAVDTKELEDARWIHRSYLKAVLQNQ 16 T++P + T ELEDARW+ + + A L + Sbjct: 245 ------------------------TEVPQV---TSELEDARWVSHAEVSAALAGE 272
>tr|B2SRC1|B2SRC1_XANOP NADH pyrophosphatase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=PXO_02952 PE=4 SV=1 Length = 308
Score = 127 bits (318), Expect = 5e-28 Identities = 70/175 (40%), Positives = 96/175 (54%) Frame = -1
Query: 540 FCSCCGGEMEFKEGGHSLQCSFRECGSSIYPRLDPAVIVLVTCGEYLLLGRQSRWKPGRY 361 FC CGG + F+ G C+ C + YPR+DPA+IV V+ G LLLGRQ+ W PGRY Sbjct: 143 FCGVCGGAIAFRRAGFIAHCT--HCQTEHYPRVDPAIIVAVSDGARLLLGRQASWAPGRY 200
Query: 360 SLLAGFVEVGETFETAAAREIQEESGIKVKLDGLRYIASQLWPFPQSLMVGFMAEAEEKQ 181 S++AGFVE GE+ E ARE+ EE+ +V + RY+ +Q WPFP +LM+GF A A Sbjct: 201 SVIAGFVEPGESLEQTVAREVFEET--RVHVQDCRYLGAQPWPFPGALMLGFTARAPA-- 256
Query: 180 LSFPKFVDDVVPVGNEGLRVLMENTKLPTIAVDTKELEDARWIHRSYLKAVLQNQ 16 T++P + T ELEDARW+ + + A L + Sbjct: 257 ------------------------TEVPQV---TSELEDARWVSHAEVSAALAGE 284
>tr|A9VAN3|A9VAN3_MONBE Predicted protein OS=Monosiga brevicollis GN=11913 PE=4 SV=1 Length = 344
Score = 127 bits (318), Expect = 5e-28 Identities = 75/174 (43%), Positives = 92/174 (52%), Gaps = 2/174 (1%) Frame = -1
Query: 540 FCSCCGGEMEFKEGGHSLQCSFRECGSSIYPRLDPAVIVLVT--CGEYLLLGRQSRWKPG 367 FCS CG K+GGH ++C ECG S +PR DP VI+L + +LLGRQ+ W PG Sbjct: 151 FCSKCGVPSTVKQGGHEIKCGADECGLSCFPRSDPVVIMLAVDPATDRVLLGRQAAWPPG 210
Query: 366 RYSLLAGFVEVGETFETAAAREIQEESGIKVKLDGLRYIASQLWPFPQSLMVGFMAEAEE 187 +S LAGF+E GE E A ARE+ EESG++V L RY +SQ WPFP SLM+GFMA A Sbjct: 211 LHSALAGFMEHGEAAEEAVARELFEESGVRVDL--CRYHSSQPWPFPYSLMLGFMARATS 268
Query: 186 KQLSFPKFVDDVVPVGNEGLRVLMENTKLPTIAVDTKELEDARWIHRSYLKAVL 25 I VD ELE A W R ++A L Sbjct: 269 TD-----------------------------ILVDQHELETAAWYTRDEVRAAL 293
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