BP917213 |
Clone id |
YMU001_000097_G02 |
Library |
YMU01 |
Length |
397 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000097_G02. |
Accession |
BP917213 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2695Contig1 |
Sequence |
ATAGAGATGCATAATTCTTTCCAACATCCAGAATCTTTTTTCGAAATGTGTTCACATTCT CCAGAACCTCTTCGTACTTGCCCGTTCCAAATGTTAGATCGATAAGAGAATATTCATATG CATGTAAGTGCTGGTTTCTTGGAAACTTCTCAATATAAACCCTCAGAGGAAGTGCAAGTT CCTTGGTCAAAGTATCCAGTTGCTTGGCACCCTTGTTTCGTTCCCTTTTAGCAATATTAC ATATGCCTTTTGTAGGTCCAATGTTCCTTGCTTTCCTGAGAGCAGATCCAAGTAGTTCTC TCGAGCAAACAACCATAGGCAAATGTTGAAAAGCACCAAGTTCCTCTGTCAGCACAATTT TGCCTTGATTTTCATTTGACGTCTCCTCCTGTGCCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9C6I8 |
Definition |
sp|Q9C6I8|NOG1_ARATH Probable nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana |
Align length |
55 |
Score (bit) |
36.2 |
E-value |
0.052 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SAI3 |
Definition |
tr|Q9SAI3|Q9SAI3_ARATH F23A5.12 protein OS=Arabidopsis thaliana |
Align length |
127 |
Score (bit) |
149.0 |
E-value |
5.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917213|Adiantum capillus-veneris mRNA, clone: YMU001_000097_G02. (397 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SAI3|Q9SAI3_ARATH F23A5.12 protein OS=Arabidopsis thaliana ... 149 5e-35 tr|Q8L7Q9|Q8L7Q9_ARATH GTP-binding protein, putative OS=Arabidop... 149 5e-35 tr|B4G236|B4G236_MAIZE Putative uncharacterized protein OS=Zea m... 148 1e-34 tr|B6TZQ3|B6TZQ3_MAIZE Nucleolar GTP-binding protein 1 OS=Zea ma... 147 3e-34 tr|Q7EZC9|Q7EZC9_ORYSJ Os08g0158900 protein OS=Oryza sativa subs... 145 1e-33 tr|A3BPU4|A3BPU4_ORYSJ Putative uncharacterized protein OS=Oryza... 145 1e-33 tr|B8BAX0|B8BAX0_ORYSI Putative uncharacterized protein OS=Oryza... 144 2e-33 tr|A9SYZ3|A9SYZ3_PHYPA Predicted protein OS=Physcomitrella paten... 136 5e-31 tr|A5APJ2|A5APJ2_VITVI Putative uncharacterized protein OS=Vitis... 131 2e-29 tr|A7Q005|A7Q005_VITVI Chromosome chr8 scaffold_41, whole genome... 129 9e-29 tr|A4RR09|A4RR09_OSTLU Predicted protein (Fragment) OS=Ostreococ... 95 2e-18 tr|Q01GJ1|Q01GJ1_OSTTA GTP-binding protein, putative (ISS) (Frag... 87 5e-16 tr|A8IZ07|A8IZ07_CHLRE Nucleolar GTP-binding protein OS=Chlamydo... 64 4e-09 tr|B8BS87|B8BS87_THAPS Predicted protein OS=Thalassiosira pseudo... 47 5e-04 tr|Q011Z0|Q011Z0_OSTTA DNA-dependent ATPase, stimulates strand e... 40 0.058 tr|Q6L0N8|Q6L0N8_PICTO GTP-binding protein OS=Picrophilus torrid... 38 0.22 tr|B5IEN3|B5IEN3_9EURY GTPase, putative OS=Aciduliprofundum boon... 37 0.37 tr|B5IEB4|B5IEB4_9EURY GTPase, putative OS=Aciduliprofundum boon... 37 0.37 tr|A2ESM9|A2ESM9_TRIVA Putative uncharacterized protein OS=Trich... 37 0.49 tr|A4S2D2|A4S2D2_OSTLU Predicted protein OS=Ostreococcus lucimar... 36 0.83 tr|A7QNT3|A7QNT3_VITVI Chromosome undetermined scaffold_134, who... 36 1.1 tr|A5BG44|A5BG44_VITVI Putative uncharacterized protein OS=Vitis... 36 1.1 tr|A7NZR5|A7NZR5_VITVI Chromosome chr6 scaffold_3, whole genome ... 35 1.4 tr|A8XI08|A8XI08_CAEBR Putative uncharacterized protein OS=Caeno... 35 1.9 tr|A1C8U5|A1C8U5_ASPCL Enoyl-CoA hydratase/isomerase family prot... 35 1.9 tr|B1BE20|B1BE20_CLOBO N-acetylmuramoyl-L-alanine amidase OS=Clo... 35 2.4 tr|A7RHM9|A7RHM9_NEMVE Predicted protein OS=Nematostella vectens... 35 2.4 tr|Q9HJM6|Q9HJM6_THEAC GTP-binding protein related protein, GTP1... 35 2.4 tr|Q5K6X3|Q5K6X3_CRYNE Nucleolar GTP-binding protein 1, putative... 34 4.1 tr|B7XH99|B7XH99_9MICR GTPase, predicted OS=Enterocytozoon biene... 34 4.1
>tr|Q9SAI3|Q9SAI3_ARATH F23A5.12 protein OS=Arabidopsis thaliana GN=F23A5.12 PE=4 SV=1 Length = 437
Score = 149 bits (377), Expect = 5e-35 Identities = 81/127 (63%), Positives = 93/127 (73%) Frame = -1
Query: 382 TSNENQGKIVLTEELGAFQHLPMVVCSRELLGSALRKARNIGPTKGICNIAKRERNKGAK 203 TS E Q V E LGAFQ LPMV+ S +L SALRK++ + PTKGI NIAKRERN+GAK Sbjct: 76 TSPEKQSPPV-QEGLGAFQKLPMVMPSIDLYASALRKSKRVQPTKGIANIAKRERNRGAK 134
Query: 202 QLDTLTKELALPLRVYIEKFPRNQHLHAYEYSLIDLTFGTGKYEEVLENVNTFRKKILDV 23 QLD KELALPL+ Y+E FPR + LH YE SLIDLT G GKYEEVL V+ RKK+ V Sbjct: 135 QLDAFMKELALPLKGYMESFPRKKLLHPYERSLIDLTLGDGKYEEVLGKVDVLRKKVQSV 194
Query: 22 GKNYASL 2 GK +ASL Sbjct: 195 GKEHASL 201
>tr|Q8L7Q9|Q8L7Q9_ARATH GTP-binding protein, putative OS=Arabidopsis thaliana GN=At1g80770 PE=2 SV=1 Length = 451
Score = 149 bits (377), Expect = 5e-35 Identities = 81/127 (63%), Positives = 93/127 (73%) Frame = -1
Query: 382 TSNENQGKIVLTEELGAFQHLPMVVCSRELLGSALRKARNIGPTKGICNIAKRERNKGAK 203 TS E Q V E LGAFQ LPMV+ S +L SALRK++ + PTKGI NIAKRERN+GAK Sbjct: 76 TSPEKQSPPV-QEGLGAFQKLPMVMPSIDLYASALRKSKRVQPTKGIANIAKRERNRGAK 134
Query: 202 QLDTLTKELALPLRVYIEKFPRNQHLHAYEYSLIDLTFGTGKYEEVLENVNTFRKKILDV 23 QLD KELALPL+ Y+E FPR + LH YE SLIDLT G GKYEEVL V+ RKK+ V Sbjct: 135 QLDAFMKELALPLKGYMESFPRKKLLHPYERSLIDLTLGDGKYEEVLGKVDVLRKKVQSV 194
Query: 22 GKNYASL 2 GK +ASL Sbjct: 195 GKEHASL 201
>tr|B4G236|B4G236_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 462
Score = 148 bits (374), Expect = 1e-34 Identities = 74/125 (59%), Positives = 95/125 (76%) Frame = -1
Query: 376 NENQGKIVLTEELGAFQHLPMVVCSRELLGSALRKARNIGPTKGICNIAKRERNKGAKQL 197 ++ QG+ E +GAFQ +PMV+ + ++L SA RK+RN+ PTKGI NIAKRERNKGAKQL Sbjct: 87 DDTQGEQRKLETVGAFQKIPMVMPATDILMSAQRKSRNVPPTKGIANIAKRERNKGAKQL 146
Query: 196 DTLTKELALPLRVYIEKFPRNQHLHAYEYSLIDLTFGTGKYEEVLENVNTFRKKILDVGK 17 D L KEL++PLR Y E FP+ + LH YE SLI+LTFG G YE+VL V+T RK+I VGK Sbjct: 147 DALMKELSVPLRTYTENFPKRRDLHPYERSLIELTFGEGYYEQVLGRVDTLRKRITSVGK 206
Query: 16 NYASL 2 +AS+ Sbjct: 207 QHASV 211
>tr|B6TZQ3|B6TZQ3_MAIZE Nucleolar GTP-binding protein 1 OS=Zea mays PE=2 SV=1 Length = 462
Score = 147 bits (371), Expect = 3e-34 Identities = 74/122 (60%), Positives = 93/122 (76%) Frame = -1
Query: 367 QGKIVLTEELGAFQHLPMVVCSRELLGSALRKARNIGPTKGICNIAKRERNKGAKQLDTL 188 QG+ E +GAFQ +PMV+ + ++L SA RK+RN+ PTKGI NIAKRERNKGAKQLD L Sbjct: 90 QGEQRKLETVGAFQKIPMVMPATDILMSAQRKSRNVPPTKGIANIAKRERNKGAKQLDAL 149
Query: 187 TKELALPLRVYIEKFPRNQHLHAYEYSLIDLTFGTGKYEEVLENVNTFRKKILDVGKNYA 8 KEL++PLR Y E FP+ + LH YE SLI+LTFG G YE+VL V+T RK+I VGK +A Sbjct: 150 MKELSVPLRTYTENFPKRRDLHPYERSLIELTFGEGYYEQVLGRVDTLRKRITSVGKQHA 209
Query: 7 SL 2 S+ Sbjct: 210 SV 211
>tr|Q7EZC9|Q7EZC9_ORYSJ Os08g0158900 protein OS=Oryza sativa subsp. japonica GN=P0498E12.113 PE=4 SV=1 Length = 463
Score = 145 bits (365), Expect = 1e-33 Identities = 74/133 (55%), Positives = 98/133 (73%), Gaps = 1/133 (0%) Frame = -1
Query: 397 LAQEETSNENQGKIVLT-EELGAFQHLPMVVCSRELLGSALRKARNIGPTKGICNIAKRE 221 ++Q E N + +V E++GAFQ +PMV+ + ++L SA RK+RN+ PTKGI NIAKRE Sbjct: 78 ISQAEPVNGAKSDLVQKHEKVGAFQRIPMVMPATDILMSAQRKSRNVPPTKGIANIAKRE 137
Query: 220 RNKGAKQLDTLTKELALPLRVYIEKFPRNQHLHAYEYSLIDLTFGTGKYEEVLENVNTFR 41 RNKGAKQLD L KE+++PLR Y E FP+ + LH YE SLI+LTFG G YE+V+ V+ R Sbjct: 138 RNKGAKQLDALMKEISVPLRTYTENFPKRRDLHPYERSLIELTFGEGYYEKVIARVDALR 197
Query: 40 KKILDVGKNYASL 2 KKI VGK +AS+ Sbjct: 198 KKINSVGKQHASV 210
>tr|A3BPU4|A3BPU4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025066 PE=4 SV=1 Length = 445
Score = 145 bits (365), Expect = 1e-33 Identities = 74/133 (55%), Positives = 98/133 (73%), Gaps = 1/133 (0%) Frame = -1
Query: 397 LAQEETSNENQGKIVLT-EELGAFQHLPMVVCSRELLGSALRKARNIGPTKGICNIAKRE 221 ++Q E N + +V E++GAFQ +PMV+ + ++L SA RK+RN+ PTKGI NIAKRE Sbjct: 60 ISQAEPVNGAKSDLVQKHEKVGAFQRIPMVMPATDILMSAQRKSRNVPPTKGIANIAKRE 119
Query: 220 RNKGAKQLDTLTKELALPLRVYIEKFPRNQHLHAYEYSLIDLTFGTGKYEEVLENVNTFR 41 RNKGAKQLD L KE+++PLR Y E FP+ + LH YE SLI+LTFG G YE+V+ V+ R Sbjct: 120 RNKGAKQLDALMKEISVPLRTYTENFPKRRDLHPYERSLIELTFGEGYYEKVIARVDALR 179
Query: 40 KKILDVGKNYASL 2 KKI VGK +AS+ Sbjct: 180 KKINSVGKQHASV 192
>tr|B8BAX0|B8BAX0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27892 PE=4 SV=1 Length = 474
Score = 144 bits (363), Expect = 2e-33 Identities = 70/115 (60%), Positives = 90/115 (78%) Frame = -1
Query: 346 EELGAFQHLPMVVCSRELLGSALRKARNIGPTKGICNIAKRERNKGAKQLDTLTKELALP 167 E++GAFQ +PMV+ + ++L SA RK+RN+ PTKGI NIAKRERNKGAKQLD L KE+++P Sbjct: 95 EKVGAFQRIPMVMPATDILMSAQRKSRNVPPTKGIANIAKRERNKGAKQLDALMKEISVP 154
Query: 166 LRVYIEKFPRNQHLHAYEYSLIDLTFGTGKYEEVLENVNTFRKKILDVGKNYASL 2 LR Y E FP+ + LH YE SLI+LTFG G YE+V+ V+ RKKI VGK +AS+ Sbjct: 155 LRTYTENFPKRRDLHPYERSLIELTFGEGYYEKVIARVDALRKKINSVGKQHASV 209
>tr|A9SYZ3|A9SYZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_137711 PE=4 SV=1 Length = 354
Score = 136 bits (343), Expect = 5e-31 Identities = 71/119 (59%), Positives = 87/119 (73%), Gaps = 1/119 (0%) Frame = -1
Query: 355 VLTEELGAFQHLPMVVCSRELLGSALRKARNIGPTKGICNIAKRERNKGAKQLDTLTKEL 176 V ++GAFQ LP+V E+LG+ALR+ + I PTKGI N AKRERN+GAKQLD LTKEL Sbjct: 14 VKRRDIGAFQQLPVVSPGIEILGTALRRTKMIKPTKGIQNAAKRERNRGAKQLDALTKEL 73
Query: 175 ALPLRVYIEKFPRNQHLHAYEYSLIDLTFGTGKYEEV-LENVNTFRKKILDVGKNYASL 2 +PL+ Y++ FP Q LH YE SL++LT G G YEEV L V+ RK+ILD GKN ASL Sbjct: 74 TIPLKGYVKNFPECQQLHPYEQSLLELTLGPGTYEEVTLRRVDLLRKRILDYGKNCASL 132
>tr|A5APJ2|A5APJ2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043181 PE=4 SV=1 Length = 354
Score = 131 bits (329), Expect = 2e-29 Identities = 66/105 (62%), Positives = 79/105 (75%) Frame = -1
Query: 346 EELGAFQHLPMVVCSRELLGSALRKARNIGPTKGICNIAKRERNKGAKQLDTLTKELALP 167 E +GAFQ LPMV+ S ++L SALRKA+ + PTKGI NIAKRERN+ AKQLD L KELA+P Sbjct: 91 ETVGAFQKLPMVMPSVDILYSALRKAKRVSPTKGIANIAKRERNRAAKQLDFLMKELAVP 150
Query: 166 LRVYIEKFPRNQHLHAYEYSLIDLTFGTGKYEEVLENVNTFRKKI 32 LR Y E FP + LH YE SLI LT G G YE+VL V++ RKK+ Sbjct: 151 LRGYAENFPDKKQLHPYEQSLIQLTLGDGNYEQVLRRVDSLRKKV 195
>tr|A7Q005|A7Q005_VITVI Chromosome chr8 scaffold_41, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027086001 PE=4 SV=1 Length = 356
Score = 129 bits (323), Expect = 9e-29 Identities = 65/105 (61%), Positives = 79/105 (75%) Frame = -1
Query: 316 MVVCSRELLGSALRKARNIGPTKGICNIAKRERNKGAKQLDTLTKELALPLRVYIEKFPR 137 MV+ S ++L SALRKA+ + PTKGI NIAKRERN+ AKQLD L KELA+PLR Y E FP Sbjct: 1 MVMPSVDILYSALRKAKRVSPTKGIANIAKRERNRAAKQLDFLMKELAVPLRGYAENFPD 60
Query: 136 NQHLHAYEYSLIDLTFGTGKYEEVLENVNTFRKKILDVGKNYASL 2 + LH YE SLI LT G G YE+VL V++ RKK++ VGK +ASL Sbjct: 61 KKQLHPYEQSLIQLTLGDGNYEQVLRRVDSLRKKVVSVGKEHASL 105
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