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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917310
Clone id YMU001_000099_B09
Library
Length 117
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000099_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCATATCTTAACAAAACCTCCATGTTGCCAGTATCAGGAGCACTGAAATTGAAAACTTGA
GGCGCAAACATTGAACGTCCCATAATTTCACAAAGATGTGCATATTCGAGGTTTGAC
■■Homology search results ■■ -
sp_hit_id Q8K370
Definition sp|Q8K370|ACD10_MOUSE Acyl-CoA dehydrogenase family member 10 OS=Mus musculus
Align length 38
Score (bit) 65.5
E-value 8.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917310|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_B09.
         (117 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8K370|ACD10_MOUSE Acyl-CoA dehydrogenase family member 10 OS...    65   8e-11
sp|Q6JQN1|ACD10_HUMAN Acyl-CoA dehydrogenase family member 10 OS...    65   1e-10
sp|Q5ZHT1|ACD11_CHICK Acyl-CoA dehydrogenase family member 11 OS...    49   8e-06
sp|Q709F0|ACD11_HUMAN Acyl-CoA dehydrogenase family member 11 OS...    47   2e-05
sp|Q80XL6|ACD11_MOUSE Acyl-CoA dehydrogenase family member 11 OS...    47   3e-05
sp|Q5R778|ACD11_PONAB Acyl-CoA dehydrogenase family member 11 OS...    47   4e-05

>sp|Q8K370|ACD10_MOUSE Acyl-CoA dehydrogenase family member 10
           OS=Mus musculus GN=Acad10 PE=2 SV=1
          Length = 1069

 Score = 65.5 bits (158), Expect = 8e-11
 Identities = 26/38 (68%), Positives = 35/38 (92%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           +N+EYAHLCE+MG S++A ++FN SAPDTGNME+L+RY
Sbjct: 733 TNVEYAHLCEVMGMSLYASEIFNCSAPDTGNMEILVRY 770


>sp|Q6JQN1|ACD10_HUMAN Acyl-CoA dehydrogenase family member 10
           OS=Homo sapiens GN=ACAD10 PE=2 SV=1
          Length = 1059

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 27/38 (71%), Positives = 35/38 (92%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           +N+EYAHLCE+MG S++AP+V N SAPDTGNME+L+RY
Sbjct: 733 TNVEYAHLCELMGTSLYAPEVCNCSAPDTGNMELLVRY 770


>sp|Q5ZHT1|ACD11_CHICK Acyl-CoA dehydrogenase family member 11
           OS=Gallus gallus GN=ACAD11 PE=2 SV=1
          Length = 777

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 23/38 (60%), Positives = 27/38 (71%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           S L+YA + E  G+  FAP+VFN  APDTGNMEVL  Y
Sbjct: 442 SQLDYALIAEETGKRFFAPEVFNCQAPDTGNMEVLHLY 479


>sp|Q709F0|ACD11_HUMAN Acyl-CoA dehydrogenase family member 11
           OS=Homo sapiens GN=ACAD11 PE=1 SV=2
          Length = 780

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 22/38 (57%), Positives = 27/38 (71%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           S+++YA + E  G+  FAP VFN  APDTGNMEVL  Y
Sbjct: 445 SHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLY 482


>sp|Q80XL6|ACD11_MOUSE Acyl-CoA dehydrogenase family member 11
           OS=Mus musculus GN=Acad11 PE=1 SV=2
          Length = 779

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 22/38 (57%), Positives = 26/38 (68%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           S ++YA + E  G+  FAP VFN  APDTGNMEVL  Y
Sbjct: 444 SQVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLY 481


>sp|Q5R778|ACD11_PONAB Acyl-CoA dehydrogenase family member 11
           OS=Pongo abelii GN=ACAD11 PE=2 SV=2
          Length = 781

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           S ++YA + E  G+  FAP VFN  APDTGNME+L  Y
Sbjct: 446 SQVDYALIAEETGKCFFAPDVFNCQAPDTGNMEILHLY 483
tr_hit_id A9TNS8
Definition tr|A9TNS8|A9TNS8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 38
Score (bit) 73.6
E-value 5.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917310|Adiantum capillus-veneris mRNA, clone:
YMU001_000099_B09.
         (117 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TNS8|A9TNS8_PHYPA Predicted protein OS=Physcomitrella paten...    74   5e-12
tr|A9RWP4|A9RWP4_PHYPA Predicted protein OS=Physcomitrella paten...    72   1e-11
tr|A7Q8G0|A7Q8G0_VITVI Chromosome chr5 scaffold_64, whole genome...    70   5e-11
tr|A8X9C8|A8X9C8_CAEBR Putative uncharacterized protein OS=Caeno...    70   5e-11
tr|B6NJ14|B6NJ14_BRAFL Putative uncharacterized protein OS=Branc...    70   7e-11
tr|B1H2I8|B1H2I8_XENTR LOC100036613 protein (Fragment) OS=Xenopu...    69   1e-10
tr|A0JM99|A0JM99_XENTR LOC100036613 protein (Fragment) OS=Xenopu...    69   1e-10
tr|O01590|O01590_CAEEL Putative uncharacterized protein OS=Caeno...    69   1e-10
tr|B1SQC2|B1SQC2_9BACI Acyl-CoA dehydrogenase domain protein OS=...    68   2e-10
tr|Q9M7Y7|Q9M7Y7_ARATH Acetyl-coA dehydrogenase, putative OS=Ara...    68   2e-10
tr|Q8RWZ3|Q8RWZ3_ARATH Putative uncharacterized protein At3g0680...    68   2e-10
tr|Q67ZU5|Q67ZU5_ARATH MRNA, complete cds, clone: RAFL22-73-C24 ...    68   2e-10
tr|Q0WM98|Q0WM98_ARATH Putative acetyl-coA dehydrogenase OS=Arab...    68   2e-10
tr|Q2B4D5|Q2B4D5_9BACI Acyl-CoA dehydrogenase (Fragment) OS=Baci...    68   3e-10
tr|B6ISK5|B6ISK5_RHOCS Acyl-CoA dehydrogenase, putative OS=Rhodo...    67   4e-10
tr|B1HQK0|B1HQK0_LYSSC Acyl-CoA dehydrogenase family member 11 (...    67   4e-10
tr|A3I9L5|A3I9L5_9BACI Acyl-CoA dehydrogenase OS=Bacillus sp. B1...    67   4e-10
tr|A2U592|A2U592_BACCO Acyl-CoA dehydrogenase-like OS=Bacillus c...    67   4e-10
tr|A8J3M3|A8J3M3_CHLRE Acyl-CoA dehydrogenase (Fragment) OS=Chla...    67   4e-10
tr|Q6ZDX3|Q6ZDX3_ORYSJ Os07g0675000 protein OS=Oryza sativa subs...    67   6e-10
tr|B8B5V0|B8B5V0_ORYSI Putative uncharacterized protein OS=Oryza...    67   6e-10
tr|A3BND0|A3BND0_ORYSJ Putative uncharacterized protein OS=Oryza...    67   6e-10
tr|Q5L167|Q5L167_GEOKA Acyl-CoA dehydrogenase OS=Geobacillus kau...    66   1e-09
tr|A4ILR4|A4ILR4_GEOTN Acyl-CoA dehydrogenase OS=Geobacillus the...    66   1e-09
tr|B4BHX2|B4BHX2_9BACI Acyl-CoA dehydrogenase domain protein OS=...    66   1e-09
tr|A3JBQ6|A3JBQ6_9ALTE Acyl-CoA dehydrogenase OS=Marinobacter sp...    66   1e-09
tr|Q9CRH8|Q9CRH8_MOUSE Putative uncharacterized protein (Fragmen...    65   1e-09
tr|B5DEF6|B5DEF6_RAT Putative uncharacterized protein OS=Rattus ...    65   1e-09
tr|A6F634|A6F634_9ALTE Acyl-CoA dehydrogenase OS=Marinobacter al...    65   1e-09
tr|Q89NI3|Q89NI3_BRAJA Bll3855 protein OS=Bradyrhizobium japonic...    65   2e-09

>tr|A9TNS8|A9TNS8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_148260 PE=4 SV=1
          Length = 819

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 33/38 (86%), Positives = 37/38 (97%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           SNLEYAHLCEI+GRSM+APQ+FN +APDTGNMEVLLRY
Sbjct: 491 SNLEYAHLCEILGRSMWAPQMFNCNAPDTGNMEVLLRY 528


>tr|A9RWP4|A9RWP4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_120649 PE=4 SV=1
          Length = 820

 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 32/38 (84%), Positives = 36/38 (94%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           SNLEYAHLCEI+GRSM+APQ+ N +APDTGNMEVLLRY
Sbjct: 492 SNLEYAHLCEILGRSMWAPQILNCNAPDTGNMEVLLRY 529


>tr|A7Q8G0|A7Q8G0_VITVI Chromosome chr5 scaffold_64, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00033039001
           PE=4 SV=1
          Length = 444

 Score = 70.1 bits (170), Expect = 5e-11
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           SNLEY +LCEIMGRS++APQVFN  APDTGNMEVLLRY
Sbjct: 117 SNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVLLRY 154


>tr|A8X9C8|A8X9C8_CAEBR Putative uncharacterized protein
           OS=Caenorhabditis briggsae GN=CBG09328 PE=4 SV=2
          Length = 975

 Score = 70.1 bits (170), Expect = 5e-11
 Identities = 29/38 (76%), Positives = 36/38 (94%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           +NLEYAH+CE+MGRS+FAP+VFN  APDTGNMEVL++Y
Sbjct: 658 TNLEYAHICELMGRSIFAPEVFNCQAPDTGNMEVLIKY 695


>tr|B6NJ14|B6NJ14_BRAFL Putative uncharacterized protein
            OS=Branchiostoma floridae GN=BRAFLDRAFT_127702 PE=4 SV=1
          Length = 1232

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = -2

Query: 116  SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
            +N+EYAHLCE MGRS+FAP+VFN SAPDTGNMEVL++Y
Sbjct: 931  TNVEYAHLCETMGRSVFAPEVFNCSAPDTGNMEVLVKY 968


>tr|B1H2I8|B1H2I8_XENTR LOC100036613 protein (Fragment) OS=Xenopus
           tropicalis GN=LOC100036613 PE=2 SV=1
          Length = 1057

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 28/38 (73%), Positives = 36/38 (94%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           +N+EYAHLCE+MG S++AP++FN SAPDTGNMEVL+RY
Sbjct: 733 TNMEYAHLCELMGTSLYAPEIFNCSAPDTGNMEVLVRY 770


>tr|A0JM99|A0JM99_XENTR LOC100036613 protein (Fragment) OS=Xenopus
           tropicalis GN=LOC100036613 PE=2 SV=1
          Length = 966

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 28/38 (73%), Positives = 36/38 (94%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           +N+EYAHLCE+MG S++AP++FN SAPDTGNMEVL+RY
Sbjct: 642 TNMEYAHLCELMGTSLYAPEIFNCSAPDTGNMEVLVRY 679


>tr|O01590|O01590_CAEEL Putative uncharacterized protein
           OS=Caenorhabditis elegans GN=K09H11.1 PE=2 SV=2
          Length = 985

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 28/38 (73%), Positives = 36/38 (94%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           +N+EYAH+CE+MGRS+FAP+VFN  APDTGNMEVL++Y
Sbjct: 658 TNVEYAHICELMGRSIFAPEVFNCQAPDTGNMEVLIKY 695


>tr|B1SQC2|B1SQC2_9BACI Acyl-CoA dehydrogenase domain protein
           OS=Geobacillus sp. WCH70 GN=GWCH70DRAFT_1113 PE=4 SV=1
          Length = 401

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           +NLEYA LCEIMGRS+ AP+VFN SAPDTGNMEVL+RY
Sbjct: 75  TNLEYAPLCEIMGRSLIAPEVFNCSAPDTGNMEVLVRY 112


>tr|Q9M7Y7|Q9M7Y7_ARATH Acetyl-coA dehydrogenase, putative
           OS=Arabidopsis thaliana GN=F3E22.5 PE=4 SV=1
          Length = 423

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = -2

Query: 116 SNLEYAHLCEIMGRSMFAPQVFNFSAPDTGNMEVLLRY 3
           +NLEY +LCEIMGRS++APQVFN  APDTGNMEV+LRY
Sbjct: 95  TNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVILRY 132