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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917733
Clone id YMU001_000104_G05
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTCGAACTGAAGGTGTGGTTGACTTCAAATCACGTACTGGGCTAGATTTGACTGGCTTTT
AACTTGGGAGCTGATTCCAGCAGAAGGTTTCTCAGGCAAAACCAGCGGCTTTCTTGTGGA
CACCGTCCTATCAACCATCTTGCTTTGGATGCCATTGGAAAGCGTTGATTGTAGAGCATC
ATGCGGCTTCCCTTTGCTAAGGGACTTCTCACTGTTTAATGAGTCCGAGGCAAACACGGC
CCCGAGTTGTGAGAGGGGAACTTGAAAGGCGTAAGCTCCTGGCATTATTGCTTGTTACTT
CAGGTTGAGCTAGTTTTGTTCCACTTGCTCTTGAAGCCACAGATCCCCTGAAATTCGAGA
GTGGCCTATCGGGCATAGATGTCCGCAGGTTCGGTGGTGGCTCTTGAGAGAACCCTGGGA
GGACTGCTGGATGTGCAACAGGCTGCCGTACTCTGCTAGAAGGGGAGCTAGGACGCGAGG
ATGCAGCACTCTTTGATTGACGTAATGCACTGGTCCTACTCACAGATGATGACCTCATAA
TTG
■■Homology search results ■■ -
sp_hit_id Q6UWF5
Definition sp|Q6UWF5|YF002_HUMAN Putative uncharacterized protein UNQ5815/PRO19632 OS=Homo sapiens
Align length 46
Score (bit) 33.9
E-value 0.53
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917733|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_G05.
         (543 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6UWF5|YF002_HUMAN Putative uncharacterized protein UNQ5815/P...    34   0.53 
sp|P87132|YFK5_SCHPO Uncharacterized protein C167.05 OS=Schizosa...    33   0.89 
sp|P18850|ATF6A_HUMAN Cyclic AMP-dependent transcription factor ...    32   2.6  
sp|Q5VTH2|CA192_HUMAN Uncharacterized protein C1orf192 OS=Homo s...    30   5.8  

>sp|Q6UWF5|YF002_HUMAN Putative uncharacterized protein
           UNQ5815/PRO19632 OS=Homo sapiens GN=UNQ5815/PRO19632
           PE=4 SV=1
          Length = 114

 Score = 33.9 bits (76), Expect = 0.53
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +3

Query: 87  VSQAKPAAFLWTPSYQPSCF----GCHWKALIVEHHAASLC*GTSH 212
           +S A P A  WT  + PS       C W A+IV  H  + C  T+H
Sbjct: 57  ISPAGPHALTWTTHFSPSVIIILVPCWWHAVIVTQHPVANCYVTNH 102


>sp|P87132|YFK5_SCHPO Uncharacterized protein C167.05
           OS=Schizosaccharomyces pombe GN=SPAC167.05 PE=1 SV=2
          Length = 601

 Score = 33.1 bits (74), Expect = 0.89
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
 Frame = -1

Query: 231 ASDSLNSEKSLSKGKPHDALQSTLSNGIQSKMVD----RTVSTRKPLVLPE---KPSAGI 73
           +S S NS+KS + G  ++ LQST S   Q +M D     T  +++ +  P+    P+ G 
Sbjct: 148 SSVSTNSDKSRTIGSNYNMLQSTKSTASQRRMSDSSTPSTTKSKEKIFSPKALSSPTQGA 207

Query: 72  SSQVKSQS 49
           SS V  +S
Sbjct: 208 SSNVTPES 215


>sp|P18850|ATF6A_HUMAN Cyclic AMP-dependent transcription factor
           ATF-6 alpha OS=Homo sapiens GN=ATF6 PE=1 SV=3
          Length = 670

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
 Frame = -1

Query: 258 PLSQLGAVFASDSLNSEKSLSKGKPHDALQSTLSNGIQSK---MVDRTVSTR-KPLVLPE 91
           PLS  G    S+SL+S + L + KP    ++   NG+  K    V+   S + KPL+LP 
Sbjct: 131 PLSLYGE--NSNSLSSAEPLKEDKPVTGPRNKTENGLTPKKKIQVNSKPSIQPKPLLLPA 188

Query: 90  KPSAGISSQVKSQSNLAQYV 31
            P    +S V +++ + Q V
Sbjct: 189 APKTQTNSSVPAKTIIIQTV 208


>sp|Q5VTH2|CA192_HUMAN Uncharacterized protein C1orf192 OS=Homo
           sapiens GN=C1orf192 PE=2 SV=1
          Length = 177

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 192 GKPHDALQSTLSNGIQSKMVDRTVS-TRKPLVLPEKPSAGISSQVKSQSN 46
           GKPHD         ++ K + +TV   R P ++P  P+A ++S  + QS+
Sbjct: 115 GKPHDP---DSQKKLRKKSITKTVQQARSPTIIPSSPAANLNSPDELQSS 161
tr_hit_id Q494P4
Definition tr|Q494P4|Q494P4_ARATH At2g40070 (En/Spm-like transposon protein) OS=Arabidopsis thaliana
Align length 43
Score (bit) 47.0
E-value 0.0006
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917733|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_G05.
         (543 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q494P4|Q494P4_ARATH At2g40070 (En/Spm-like transposon protein...    47   6e-04
tr|O04210|O04210_ARATH En/Spm-like transposon protein OS=Arabido...    47   6e-04
tr|A8MRI7|A8MRI7_ARATH Uncharacterized protein At2g40070.2 OS=Ar...    47   6e-04
tr|Q5ZEN5|Q5ZEN5_ORYSJ Putative proteophosphoglycan OS=Oryza sat...    46   0.001
tr|Q0JQS7|Q0JQS7_ORYSJ cDNA clone:J023068G12, full insert sequen...    46   0.001
tr|B8AD70|B8AD70_ORYSI Putative uncharacterized protein OS=Oryza...    46   0.001
tr|Q2QV87|Q2QV87_ORYSJ Os12g0239000 protein OS=Oryza sativa subs...    46   0.001
tr|A3CG73|A3CG73_ORYSJ Putative uncharacterized protein OS=Oryza...    46   0.001
tr|A2ZJC0|A2ZJC0_ORYSI Putative uncharacterized protein OS=Oryza...    46   0.001
tr|A7QBR5|A7QBR5_VITVI Chromosome chr1 scaffold_75, whole genome...    45   0.003
tr|A5C8L0|A5C8L0_VITVI Putative uncharacterized protein OS=Vitis...    45   0.003
tr|B8A2R5|B8A2R5_MAIZE Putative uncharacterized protein OS=Zea m...    44   0.005
tr|B7ZY23|B7ZY23_MAIZE Putative uncharacterized protein OS=Zea m...    44   0.005
tr|A7PP37|A7PP37_VITVI Chromosome chr8 scaffold_23, whole genome...    44   0.007
tr|A2ZJC1|A2ZJC1_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.007
tr|Q9C6N3|Q9C6N3_ARATH Transposon protein, putative OS=Arabidops...    42   0.016
tr|Q9S7V5|Q9S7V5_ARATH T16O11.4 protein (At3g09000) (Putative un...    42   0.021
tr|Q2QV86|Q2QV86_ORYSJ Os12g0239200 protein OS=Oryza sativa subs...    42   0.027
tr|A7Q3F2|A7Q3F2_VITVI Chromosome chr13 scaffold_48, whole genom...    41   0.036
tr|B7ZYB1|B7ZYB1_MAIZE Putative uncharacterized protein OS=Zea m...    35   0.043
tr|B6SWV7|B6SWV7_MAIZE Transposon protein CACTA, En/Spm sub-clas...    35   0.043
tr|A5AFP6|A5AFP6_VITVI Putative uncharacterized protein (Chromos...    41   0.046
tr|Q9C9Y9|Q9C9Y9_ARATH Putative uncharacterized protein F17O14.1...    40   0.061
tr|Q4PER4|Q4PER4_USTMA Putative uncharacterized protein OS=Ustil...    39   0.18 
tr|Q9LFA8|Q9LFA8_ARATH Putative uncharacterized protein F7J8_260...    38   0.30 
tr|Q75GL8|Q75GL8_ORYSJ Os05g0480600 protein OS=Oryza sativa subs...    37   0.51 
tr|B8AZA7|B8AZA7_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.51 
tr|B6SY29|B6SY29_MAIZE Transposon protein CACTA, En/Spm sub-clas...    37   0.51 
tr|A3B556|A3B556_ORYSJ Putative uncharacterized protein OS=Oryza...    37   0.51 
tr|Q5QLZ3|Q5QLZ3_ORYSJ Gastric mucin-like protein (Os01g0819000 ...    37   0.88 

>tr|Q494P4|Q494P4_ARATH At2g40070 (En/Spm-like transposon protein)
           OS=Arabidopsis thaliana GN=At2g40070 PE=2 SV=1
          Length = 607

 Score = 47.0 bits (110), Expect = 6e-04
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -3

Query: 430 PAVLPGFSQEPPPNLRTSMPDRPLSNFRGSVASRASGTKLAQP 302
           P+ +PGFS E PPNLRT++P+RPLS  RG   + +S +   +P
Sbjct: 373 PSDMPGFSLETPPNLRTTLPERPLSATRGRPGAPSSRSGSVEP 415


>tr|O04210|O04210_ARATH En/Spm-like transposon protein
           OS=Arabidopsis thaliana GN=At2g40070 PE=2 SV=1
          Length = 510

 Score = 47.0 bits (110), Expect = 6e-04
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -3

Query: 430 PAVLPGFSQEPPPNLRTSMPDRPLSNFRGSVASRASGTKLAQP 302
           P+ +PGFS E PPNLRT++P+RPLS  RG   + +S +   +P
Sbjct: 346 PSDMPGFSLETPPNLRTTLPERPLSATRGRPGAPSSRSGSVEP 388


>tr|A8MRI7|A8MRI7_ARATH Uncharacterized protein At2g40070.2
           OS=Arabidopsis thaliana GN=At2g40070 PE=4 SV=1
          Length = 567

 Score = 47.0 bits (110), Expect = 6e-04
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -3

Query: 430 PAVLPGFSQEPPPNLRTSMPDRPLSNFRGSVASRASGTKLAQP 302
           P+ +PGFS E PPNLRT++P+RPLS  RG   + +S +   +P
Sbjct: 333 PSDMPGFSLETPPNLRTTLPERPLSATRGRPGAPSSRSGSVEP 375


>tr|Q5ZEN5|Q5ZEN5_ORYSJ Putative proteophosphoglycan OS=Oryza sativa
           subsp. japonica GN=P0019D06.10 PE=4 SV=1
          Length = 601

 Score = 46.2 bits (108), Expect = 0.001
 Identities = 20/43 (46%), Positives = 29/43 (67%)
 Frame = -3

Query: 430 PAVLPGFSQEPPPNLRTSMPDRPLSNFRGSVASRASGTKLAQP 302
           P+ +PGFS + PPNLRTS+P+RP S  RG   + +S +   +P
Sbjct: 373 PSEMPGFSLDAPPNLRTSLPERPTSATRGRPGAPSSRSSSVEP 415


>tr|Q0JQS7|Q0JQS7_ORYSJ cDNA clone:J023068G12, full insert sequence
           OS=Oryza sativa subsp. japonica GN=Os01g0141900 PE=2
           SV=1
          Length = 606

 Score = 46.2 bits (108), Expect = 0.001
 Identities = 20/43 (46%), Positives = 29/43 (67%)
 Frame = -3

Query: 430 PAVLPGFSQEPPPNLRTSMPDRPLSNFRGSVASRASGTKLAQP 302
           P+ +PGFS + PPNLRTS+P+RP S  RG   + +S +   +P
Sbjct: 378 PSEMPGFSLDAPPNLRTSLPERPTSATRGRPGAPSSRSSSVEP 420


>tr|B8AD70|B8AD70_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00338 PE=4 SV=1
          Length = 600

 Score = 46.2 bits (108), Expect = 0.001
 Identities = 20/43 (46%), Positives = 29/43 (67%)
 Frame = -3

Query: 430 PAVLPGFSQEPPPNLRTSMPDRPLSNFRGSVASRASGTKLAQP 302
           P+ +PGFS + PPNLRTS+P+RP S  RG   + +S +   +P
Sbjct: 372 PSEMPGFSLDAPPNLRTSLPERPTSATRGRPGAPSSRSSSVEP 414


>tr|Q2QV87|Q2QV87_ORYSJ Os12g0239000 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0239000 PE=4 SV=1
          Length = 1174

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 22/36 (61%), Positives = 24/36 (66%)
 Frame = -3

Query: 418 PGFSQEPPPNLRTSMPDRPLSNFRGSVASRASGTKL 311
           PGFS + PPNLRTSM DRPLS  RG   S  SG  +
Sbjct: 256 PGFSFDAPPNLRTSMSDRPLSRSRGGSPSSFSGLNM 291


>tr|A3CG73|A3CG73_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_034295 PE=4 SV=1
          Length = 1121

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 22/36 (61%), Positives = 24/36 (66%)
 Frame = -3

Query: 418 PGFSQEPPPNLRTSMPDRPLSNFRGSVASRASGTKL 311
           PGFS + PPNLRTSM DRPLS  RG   S  SG  +
Sbjct: 203 PGFSFDAPPNLRTSMSDRPLSRSRGGSPSSFSGLNM 238


>tr|A2ZJC0|A2ZJC0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_37920 PE=4 SV=1
          Length = 1121

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 22/36 (61%), Positives = 24/36 (66%)
 Frame = -3

Query: 418 PGFSQEPPPNLRTSMPDRPLSNFRGSVASRASGTKL 311
           PGFS + PPNLRTSM DRPLS  RG   S  SG  +
Sbjct: 203 PGFSFDAPPNLRTSMSDRPLSRSRGGSPSSFSGLNM 238


>tr|A7QBR5|A7QBR5_VITVI Chromosome chr1 scaffold_75, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00035081001
           PE=4 SV=1
          Length = 1184

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = -3

Query: 421 LPGFSQEPPPNLRTSMPDRPLSNFRGSVASRASG 320
           +PGFS E PPNLRTS+ DRP S  RGS  +  +G
Sbjct: 257 IPGFSSEAPPNLRTSLADRPASYVRGSSPASRNG 290