BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918947|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_D04.
         (254 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P43283|TRPB1_MAIZE Tryptophan synthase beta chain 1 (Fragment...    30   4.8  
sp|Q9V0L2|AAT_PYRAB Aspartate aminotransferase OS=Pyrococcus aby...    30   4.8  
sp|Q4UJT0|PRIM_RICFE DNA primase OS=Rickettsia felis GN=dnaG PE=...    29   8.3  

>sp|P43283|TRPB1_MAIZE Tryptophan synthase beta chain 1 (Fragment)
           OS=Zea mays GN=TSB1 PE=2 SV=1
          Length = 389

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = -3

Query: 171 HVYPYSLRRFHIIFRLWMYDKFRRACMHSQFGYALFLVECIGTGKSQVQPLSEKVK 4
           H YP  +R FH +       + RR  MH   G    LV C+G G + +    E V+
Sbjct: 192 HPYPMMVREFHKVIG----KETRRQAMHKWGGKPDVLVACVGGGSNAMGLFHEFVE 243


>sp|Q9V0L2|AAT_PYRAB Aspartate aminotransferase OS=Pyrococcus abyssi
           GN=aspC PE=3 SV=1
          Length = 389

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 80  NWLCIHARRNLSYIQRRNIIWKRLNEYG 163
           +W  +   R   Y +RR ++WKRLNE G
Sbjct: 283 SWKAVEEMRK-EYDRRRKLVWKRLNEMG 309


>sp|Q4UJT0|PRIM_RICFE DNA primase OS=Rickettsia felis GN=dnaG PE=3
           SV=1
          Length = 595

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = +1

Query: 1   HLDFFGKWLYL*LASTNTFDEEKCITKLAVHTCPSKLIIHPKAEYYMETSQ*VWINVLTI 180
           H+++ GK       S  T +E+  + K     C      + KA YY    + +W N++T 
Sbjct: 365 HIEYSGK-------SFKTAEEKANLEKNLKDYCSKISDSNLKASYYRFFKEQIWQNLVTK 417

Query: 181 RKAWGTKDSTL 213
           +K   TK+S L
Sbjct: 418 QKKATTKNSNL 428

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918947|Adiantum capillus-veneris mRNA, clone:
YMU001_000119_D04.
         (254 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7C0E0|B7C0E0_9FIRM Putative uncharacterized protein OS=Roseb...    34   4.2  

>tr|B7C0E0|B7C0E0_9FIRM Putative uncharacterized protein
           OS=Roseburia intestinalis L1-82 GN=ROSINTL182_02480 PE=4
           SV=1
          Length = 530

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
 Frame = -3

Query: 222 WANQSGVLCSPSLSNCKHVYPYSLRRFHIIF-------RLWMYDKFRRAC---MHSQFGY 73
           WANQSGV+       C++   Y L +   +          W+ D F+R C      ++GY
Sbjct: 342 WANQSGVILDHLSVLCENEKIYGLMKAQTLIINRQRQEASWILDDFKRTCEDHESPEWGY 401

Query: 72  ALFLVECIGTGKSQVQPLSEKVK 4
            L+L   +    S V  L+ +V+
Sbjct: 402 YLYLCTLMEREPSYVDRLTTEVE 424