BP919336 |
Clone id |
YMU001_000123_H07 |
Library |
YMU01 |
Length |
541 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000123_H07. |
Accession |
BP919336 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1256Contig1 |
Sequence |
AATGGCTCAACTGAACATAGCATAAGGCCAGTGTAAACTGTCAACCAAGTGTACCCACAA CATTATAGTGGTTGATCTTCTGGTTGAACGAGAAAACAATCTTTCTTGAAACCCTCTTTA CCTGATTGCTCGCTGTAGGTATTATCATTACAAATAAATGAATAGCAGTGTCCATATGTA TACAAAACTCTTGCCAGACTGAGAGTCCCACCTCCACATCCTGATGTGAATGGAGCATGC GTCAATAACAAAGACCCAATCGCGTTTTAATACGACACAAAGCATGTTTGCTGATGTGAA TGTCCTCTTGTATGATTCCATTTGCATATCAGAGTTATGCACTTAAACATTTCGCAGTGC TGGCAACCGTTGTTCCAAATCGTCCACCTCAGAGCTTGTGCCTTGAGCTCTCTTGTTTGC ACTTTTTCCCTTTGGAGCTGATGAGAGCTGGGCAGCAATATCGATGCCAATCTCATCCAG CAGCTGATTAGTCAACTCCTCTGTCTCTTCCTCGGCTTCTTCATTATCCAGAGCATCATC A |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P54949 |
Definition |
sp|P54949|YXEJ_BACSU Uncharacterized protein yxeJ OS=Bacillus subtilis |
Align length |
78 |
Score (bit) |
32.3 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NQ75 |
Definition |
tr|A9NQ75|A9NQ75_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
42 |
Score (bit) |
60.1 |
E-value |
7.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919336|Adiantum capillus-veneris mRNA, clone: YMU001_000123_H07. (541 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NQ75|A9NQ75_PICSI Putative uncharacterized protein OS=Picea... 60 7e-08 tr|B6T5E0|B6T5E0_MAIZE Charged multivesicular body protein 2b OS... 52 2e-05 tr|Q9AUZ6|Q9AUZ6_ORYSJ Os10g0476400 protein OS=Oryza sativa subs... 52 3e-05 tr|Q7G7X3|Q7G7X3_ORYSA Putative uncharacterized protein OSJNBb00... 52 3e-05 tr|A2Z8I6|A2Z8I6_ORYSI Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|Q9ZWB5|Q9ZWB5_ARATH F21M11.12 protein OS=Arabidopsis thaliana... 50 6e-05 tr|Q941D5|Q941D5_ARATH At1g03950/F21M11_12 OS=Arabidopsis thalia... 50 6e-05 tr|A9PJA3|A9PJA3_POPJC Putative uncharacterized protein OS=Popul... 50 8e-05 tr|A7Q1Q7|A7Q1Q7_VITVI Chromosome chr7 scaffold_44, whole genome... 49 2e-04 tr|A5B0E1|A5B0E1_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04 tr|B7FHD8|B7FHD8_MEDTR Putative uncharacterized protein OS=Medic... 47 8e-04 tr|A7QC26|A7QC26_VITVI Chromosome chr10 scaffold_76, whole genom... 45 0.002 tr|A5AK81|A5AK81_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|Q6ASS4|Q6ASS4_ORYSJ Os03g0639800 protein OS=Oryza sativa subs... 45 0.003 tr|Q0WTY4|Q0WTY4_ARATH Putative uncharacterized protein At5g4456... 45 0.003 tr|B8AN41|B8AN41_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.003 tr|B3H7E8|B3H7E8_ARATH Uncharacterized protein At5g44560.2 OS=Ar... 45 0.003 tr|A3AKQ8|A3AKQ8_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.003 tr|Q9FGV7|Q9FGV7_ARATH Gb|AAD10675.1 OS=Arabidopsis thaliana PE=... 44 0.004 tr|B6TQT7|B6TQT7_MAIZE Charged multivesicular body protein 2a OS... 42 0.027 tr|A9T898|A9T898_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.079 tr|Q06HZ8|Q06HZ8_9ROSA Granule-bound starch synthase (Fragment) ... 33 9.5
>tr|A9NQ75|A9NQ75_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 212
Score = 60.1 bits (144), Expect = 7e-08 Identities = 33/42 (78%), Positives = 36/42 (85%), Gaps = 1/42 (2%) Frame = -2
Query: 471 IGIDIAAQLSSAPKGKSANKRAQGT-SSEVDDLEQRLPALRN 349 IGIDIA+QLSSAPKGK A +RAQG SS+V DLEQRL ALRN Sbjct: 170 IGIDIASQLSSAPKGKIAERRAQGAGSSDVADLEQRLAALRN 211
>tr|B6T5E0|B6T5E0_MAIZE Charged multivesicular body protein 2b OS=Zea mays PE=2 SV=1 Length = 212
Score = 52.0 bits (123), Expect = 2e-05 Identities = 27/42 (64%), Positives = 35/42 (83%), Gaps = 1/42 (2%) Frame = -2
Query: 471 IGIDIAAQLSSAPKGKSANKRAQ-GTSSEVDDLEQRLPALRN 349 IG+DIA+QLSSAPKGK A K+ Q SSE+++LE+RL AL+N Sbjct: 170 IGVDIASQLSSAPKGKIAGKKVQVDGSSELEELEKRLAALKN 211
>tr|Q9AUZ6|Q9AUZ6_ORYSJ Os10g0476400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0026O12.13 PE=2 SV=1 Length = 212
Score = 51.6 bits (122), Expect = 3e-05 Identities = 26/42 (61%), Positives = 34/42 (80%), Gaps = 1/42 (2%) Frame = -2
Query: 471 IGIDIAAQLSSAPKGKSANKRAQG-TSSEVDDLEQRLPALRN 349 IG+DIA+QLSSAPKG+ K+ Q SSE+D+LE+RL AL+N Sbjct: 170 IGVDIASQLSSAPKGRITGKKVQADESSELDELEKRLAALKN 211
>tr|Q7G7X3|Q7G7X3_ORYSA Putative uncharacterized protein OSJNBb0044B19.7 OS=Oryza sativa GN=OSJNBb0044B19.7 PE=4 SV=1 Length = 212
Score = 51.6 bits (122), Expect = 3e-05 Identities = 26/42 (61%), Positives = 34/42 (80%), Gaps = 1/42 (2%) Frame = -2
Query: 471 IGIDIAAQLSSAPKGKSANKRAQG-TSSEVDDLEQRLPALRN 349 IG+DIA+QLSSAPKG+ K+ Q SSE+D+LE+RL AL+N Sbjct: 170 IGVDIASQLSSAPKGRITGKKVQADESSELDELEKRLAALKN 211
>tr|A2Z8I6|A2Z8I6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34021 PE=4 SV=1 Length = 212
Score = 51.6 bits (122), Expect = 3e-05 Identities = 26/42 (61%), Positives = 34/42 (80%), Gaps = 1/42 (2%) Frame = -2
Query: 471 IGIDIAAQLSSAPKGKSANKRAQG-TSSEVDDLEQRLPALRN 349 IG+DIA+QLSSAPKG+ K+ Q SSE+D+LE+RL AL+N Sbjct: 170 IGVDIASQLSSAPKGRITGKKVQADESSELDELEKRLAALKN 211
>tr|Q9ZWB5|Q9ZWB5_ARATH F21M11.12 protein OS=Arabidopsis thaliana GN=F21M11.12 PE=4 SV=1 Length = 213
Score = 50.4 bits (119), Expect = 6e-05 Identities = 27/41 (65%), Positives = 33/41 (80%), Gaps = 1/41 (2%) Frame = -2
Query: 471 IGIDIAAQLSSAPKGKSANKRAQGT-SSEVDDLEQRLPALR 352 IGIDIA+QLSSAPKGK K+A+ SS +D+LE+RL ALR Sbjct: 173 IGIDIASQLSSAPKGKIGGKKAEDVGSSGIDELEKRLAALR 213
>tr|Q941D5|Q941D5_ARATH At1g03950/F21M11_12 OS=Arabidopsis thaliana GN=At1g03950 PE=2 SV=1 Length = 210
Score = 50.4 bits (119), Expect = 6e-05 Identities = 27/41 (65%), Positives = 33/41 (80%), Gaps = 1/41 (2%) Frame = -2
Query: 471 IGIDIAAQLSSAPKGKSANKRAQGT-SSEVDDLEQRLPALR 352 IGIDIA+QLSSAPKGK K+A+ SS +D+LE+RL ALR Sbjct: 170 IGIDIASQLSSAPKGKIGGKKAEDVGSSGIDELEKRLAALR 210
>tr|A9PJA3|A9PJA3_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 212
Score = 50.1 bits (118), Expect = 8e-05 Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%) Frame = -2
Query: 471 IGIDIAAQLSSAPKGKSANK-RAQGTSSEVDDLEQRLPALRN 349 IG+D+A+QLS+APKGK A K R +SS +D+LE+RL LRN Sbjct: 170 IGVDVASQLSAAPKGKIAGKNRENASSSGIDELEKRLATLRN 211
>tr|A7Q1Q7|A7Q1Q7_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028560001 PE=4 SV=1 Length = 212
Score = 48.5 bits (114), Expect = 2e-04 Identities = 24/42 (57%), Positives = 33/42 (78%), Gaps = 1/42 (2%) Frame = -2
Query: 471 IGIDIAAQLSSAPKGKSANKRAQGT-SSEVDDLEQRLPALRN 349 IG+D+A+QLS+APKGK A K+ + SS + +LE+RL ALRN Sbjct: 170 IGVDVASQLSAAPKGKIARKKTEDVGSSGISELEKRLAALRN 211
>tr|A5B0E1|A5B0E1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017410 PE=4 SV=1 Length = 229
Score = 48.5 bits (114), Expect = 2e-04 Identities = 24/42 (57%), Positives = 33/42 (78%), Gaps = 1/42 (2%) Frame = -2
Query: 471 IGIDIAAQLSSAPKGKSANKRAQGT-SSEVDDLEQRLPALRN 349 IG+D+A+QLS+APKGK A K+ + SS + +LE+RL ALRN Sbjct: 187 IGVDVASQLSAAPKGKIARKKTEDVGSSGISELEKRLAALRN 228
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