BP919475 |
Clone id |
YMU001_000125_E06 |
Library |
YMU01 |
Length |
471 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000125_E06. |
Accession |
BP919475 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3745Contig1 |
Sequence |
TATCCAACAGGACCGGTCGACCATACAACAACCACACAAGGCATCTCATTCACAAAGGTT GAAACAAAAGAACTAAACCTTGAAGAACTTTTTAAAAGTTTGTGAAACAGACCTTATGAC ATTGCCAATAGCAGCTGGAACATACATTAGAAAATCATCATTATGCTTCCAGCCATCATA TAACTGCAAGCCTTTTTCCTTCACACTCCCTTTCTCTTCTGTCTCAGGGCTGTCCGTTGC AGGTCTTTCAAGGGTTTCAGCTCCCTTTGCTTCACCTGACTCACCAAATCCCATACCTGC TGTTCTTTCCTCAGTAGCTGAAGTTCTTTTCACTACCATGTCTGCGCAGCCATCATCCTC CTTGATAGAGCTTAACTCGTCATTTGTGCCCTGCGCTGGTTGGGACAAACCACACTGTTC TGCTCCATTATATTCTGGCTCTTCATTAACTGATCCTCAATCATTCCCAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q4IR08 |
Definition |
sp|Q4IR08|ASF1_GIBZE Histone chaperone ASF1 OS=Gibberella zeae |
Align length |
76 |
Score (bit) |
33.1 |
E-value |
0.64 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q82HR9 |
Definition |
tr|Q82HR9|Q82HR9_STRAW Putative uncharacterized protein OS=Streptomyces avermitilis |
Align length |
71 |
Score (bit) |
37.7 |
E-value |
0.29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919475|Adiantum capillus-veneris mRNA, clone: YMU001_000125_E06. (471 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q82HR9|Q82HR9_STRAW Putative uncharacterized protein OS=Strep... 38 0.29 tr|B3PWZ0|B3PWZ0_RHIE6 Hypothetical conserved protein OS=Rhizobi... 38 0.29 tr|A0P3D0|A0P3D0_9RHOB D-lactate dehydrogenase (Cytochrome) OS=L... 37 0.64 tr|A9PEQ2|A9PEQ2_POPTR Putative uncharacterized protein OS=Popul... 37 0.64 tr|Q2HE53|Q2HE53_CHAGB Putative uncharacterized protein OS=Chaet... 36 0.84 tr|A3U4C3|A3U4C3_9FLAO Transcriptional regulator, AraC family wi... 35 2.4 tr|A8HPG2|A8HPG2_CHLRE Predicted protein OS=Chlamydomonas reinha... 35 2.4 tr|B2VWQ8|B2VWQ8_PYRTR Predicted protein OS=Pyrenophora tritici-... 35 2.4 tr|B7GCA9|B7GCA9_PHATR Predicted protein OS=Phaeodactylum tricor... 35 2.5 tr|Q90YI2|Q90YI2_FUGRU Thyroid hormone receptor associated prote... 33 5.4 tr|B6KTJ0|B6KTJ0_TOXGO Putative uncharacterized protein OS=Toxop... 33 5.5 tr|A8PVM0|A8PVM0_MALGO 3-isopropylmalate dehydrogenase OS=Malass... 33 5.5 tr|Q4RWA2|Q4RWA2_TETNG Chromosome 2 SCAF14990, whole genome shot... 33 7.1 tr|B7UBF0|B7UBF0_9RODE Neurofilament medium tail domain (Fragmen... 33 7.1 tr|A8SBH6|A8SBH6_9FIRM Putative uncharacterized protein OS=Faeca... 33 7.1 tr|B4MJ53|B4MJ53_DROWI GK10300 OS=Drosophila willistoni GN=GK103... 33 7.1 tr|A7SDU4|A7SDU4_NEMVE Predicted protein OS=Nematostella vectens... 33 7.1 tr|Q9HD28|Q9HD28_HUMAN Retinitis pigmentosa GTPase regulator (Fr... 33 7.1 tr|Q3KN84|Q3KN84_HUMAN RPGR ORF15 isoform OS=Homo sapiens PE=2 SV=1 33 7.1 tr|A7HT12|A7HT12_PARL1 3-isopropylmalate dehydrogenase OS=Parvib... 33 7.1 tr|A6DZN9|A6DZN9_9RHOB Ribonuclease, Rne/Rng family protein OS=R... 33 9.3 tr|A9TQ79|A9TQ79_PHYPA Predicted protein OS=Physcomitrella paten... 33 9.3 tr|B6M4T0|B6M4T0_BRAFL Putative uncharacterized protein OS=Branc... 33 9.3 tr|B6KDX4|B6KDX4_TOXGO Putative uncharacterized protein OS=Toxop... 33 9.3
>tr|Q82HR9|Q82HR9_STRAW Putative uncharacterized protein OS=Streptomyces avermitilis GN=SAV3439 PE=4 SV=1 Length = 178
Score = 37.7 bits (86), Expect = 0.29 Identities = 25/71 (35%), Positives = 34/71 (47%) Frame = -1
Query: 384 NDELSSIKEDDGCADMVVKRTSATEERTAGMGFGESGEAKGAETLERPATDSPETEEKGS 205 N L S +DD D + SAT+ AG G ++G+A G A+ S GS Sbjct: 81 NGTLKSFTQDDITGDFNSRTVSATKFWQAGNGLKQTGKADG-------ASFSLADNNLGS 133
Query: 204 VKEKGLQLYDG 172 +KGL +YDG Sbjct: 134 ANKKGLVIYDG 144
>tr|B3PWZ0|B3PWZ0_RHIE6 Hypothetical conserved protein OS=Rhizobium etli (strain CIAT 652) GN=RHECIAT_CH0001818 PE=4 SV=1 Length = 252
Score = 37.7 bits (86), Expect = 0.29 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 2/102 (1%) Frame = -1
Query: 471 SGND*GSVNEEPEYNGAEQCGLSQPAQ--GTNDELSSIKEDDGCADMVVKRTSATEERTA 298 SG G+ ++P+ A G QP+ G++ SS DG + + ++ T+ A Sbjct: 32 SGQSGGAATQQPD--AATDQGTQQPSGSGGSSSGASSGATTDGSSGQTTEPSAKTQP-DA 88
Query: 297 GMGFGESGEAKGAETLERPATDSPETEEKGSVKEKGLQLYDG 172 G SGE G+ P SPE+++ K+ G Q G Sbjct: 89 KTQSGGSGETSGSSKTTEPGQASPESQQPAGSKDAGTQTDSG 130
>tr|A0P3D0|A0P3D0_9RHOB D-lactate dehydrogenase (Cytochrome) OS=Labrenzia aggregata IAM 12614 GN=SIAM614_05426 PE=4 SV=1 Length = 980
Score = 36.6 bits (83), Expect = 0.64 Identities = 25/90 (27%), Positives = 40/90 (44%) Frame = -1
Query: 408 LSQPAQGTNDELSSIKEDDGCADMVVKRTSATEERTAGMGFGESGEAKGAETLERPATDS 229 + Q QGT D L ++ D+G D +++ EER +GF S E KG + TD Sbjct: 319 IEQFVQGTPDALLLVEFDEGSQDANLEKLRLLEERMGDLGFAWSNEGKGWGGV-LTVTDQ 377
Query: 228 PETEEKGSVKEKGLQLYDGWKHNDDFLMYV 139 + V++ GL + K + +V Sbjct: 378 QLQGQIAEVRKSGLNIMMSMKQEGKPVSFV 407
>tr|A9PEQ2|A9PEQ2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 348
Score = 36.6 bits (83), Expect = 0.64 Identities = 29/102 (28%), Positives = 43/102 (42%) Frame = -1
Query: 471 SGND*GSVNEEPEYNGAEQCGLSQPAQGTNDELSSIKEDDGCADMVVKRTSATEERTAGM 292 SGND ++E E++G G DE S + + C ++ K + + + G Sbjct: 47 SGND----SDEAEFSGG----------GGQDEPSML--EGNCRELSAKSLGSNKRKRNGQ 90
Query: 291 GFGESGEAKGAETLERPATDSPETEEKGSVKEKGLQLYDGWK 166 E +AKG PA SPET++KG K D K Sbjct: 91 D-AELDQAKGTPQSAEPAKGSPETQQKGDQKPTSTTSKDAGK 131
>tr|Q2HE53|Q2HE53_CHAGB Putative uncharacterized protein OS=Chaetomium globosum GN=CHGG_01501 PE=4 SV=1 Length = 6459
Score = 36.2 bits (82), Expect = 0.84 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Frame = -1
Query: 456 GSVNEEPEYNGAEQCGLSQPAQGTNDELSSIKEDDGCADMVVKRTSATEERTAGMGFGES 277 G+ +E+P+ + G SQ + +ND E AD V+ A EE+ G G G+ Sbjct: 3304 GTEDEQPDKIALQSPGQSQGFELSNDTQQPTVEAPVAADDAVETADAMEEK--GEGQGQK 3361
Query: 276 GEAKGAE-TLERPATDSPETEE 214 K AE L+ PA D+P E Sbjct: 3362 DTPKEAEPALQDPAEDTPPPPE 3383
>tr|A3U4C3|A3U4C3_9FLAO Transcriptional regulator, AraC family with Parallel beta-helix repeat (Fragment) OS=Croceibacter atlanticus HTCC2559 GN=CA2559_00005 PE=4 SV=1 Length = 8762
Score = 34.7 bits (78), Expect = 2.4 Identities = 19/71 (26%), Positives = 29/71 (40%) Frame = -1
Query: 432 YNGAEQCGLSQPAQGTNDELSSIKEDDGCADMVVKRTSATEERTAGMGFGESGEAKGAET 253 YN + GL G ++ ++DG D+V A + G G+ GA Sbjct: 1434 YNNPQTLGLDSDGDGIPNQFDLDADNDGIYDIVENGNGALDTNNDGAADAADGQNVGANG 1493
Query: 252 LERPATDSPET 220 + A DSPE+ Sbjct: 1494 VPDDAEDSPES 1504
>tr|A8HPG2|A8HPG2_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_146239 PE=4 SV=1 Length = 397
Score = 34.7 bits (78), Expect = 2.4 Identities = 26/85 (30%), Positives = 39/85 (45%) Frame = -1
Query: 408 LSQPAQGTNDELSSIKEDDGCADMVVKRTSATEERTAGMGFGESGEAKGAETLERPATDS 229 L + A+ T D SI+E+ VV RT T+E F AK + ATD Sbjct: 213 LEEEARNTKDIAESIEEERA---KVVARTPITQET-----FSAWHRAKREAKAAKRATDE 264
Query: 228 PETEEKGSVKEKGLQLYDGWKHNDD 154 E +KG + + + + +G+ NDD Sbjct: 265 EERRKKGILNGREIFMQEGFVANDD 289
>tr|B2VWQ8|B2VWQ8_PYRTR Predicted protein OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=PTRG_01620 PE=4 SV=1 Length = 214
Score = 34.7 bits (78), Expect = 2.4 Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 11/83 (13%) Frame = -1
Query: 396 AQGTNDELS-SIKEDDG---CADMVVKRTSATEERTAGMGFGESG------EAKGA-ETL 250 A GT + S +IK++DG A K TSA ++ G+G GE G E KGA + Sbjct: 98 AAGTGKDTSVAIKKEDGDGIAAASTGKETSAYIKKEEGVGEGEDGIAGEPAEGKGAGQVP 157
Query: 249 ERPATDSPETEEKGSVKEKGLQL 181 P T T K + KGLQ+ Sbjct: 158 TPPMTPKTPTTPKTPKRRKGLQM 180
>tr|B7GCA9|B7GCA9_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1 GN=PHATRDRAFT_49918 PE=4 SV=1 Length = 652
Score = 34.7 bits (78), Expect = 2.5 Identities = 25/91 (27%), Positives = 31/91 (34%) Frame = +2
Query: 182 NCKPFSFTLPFXXXXXXXXXXXXXXXAPFASPDSPNPIPAVLSSVAEVLFTTMSAQPSSS 361 N S PF PFASP NP P SS+ E F +A P S Sbjct: 529 NPNQLSLPTPFPSGLPSHSPVIGIAATPFASPSQSNPYPLCTSSITENCFDQPTAAPKDS 588
Query: 362 LIELNSSFVPCAGWDKPHCSAPLYSGSSLTD 454 + V C+ +AP + S D Sbjct: 589 KPCVPGMGVVCSDGTSDPQTAPTIAPESSKD 619
>tr|Q90YI2|Q90YI2_FUGRU Thyroid hormone receptor associated protein complex component TRAP230/KIAA0192 (Fragment) OS=Fugu rubripes GN=trap230 PE=4 SV=1 Length = 1822
Score = 33.5 bits (75), Expect = 5.4 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 5/42 (11%) Frame = -1
Query: 273 EAKGAETLERPATDSPETEEKGSVKEKGL-----QLYDGWKH 163 E+KG+ + E+PA PE + KGS K+KG+ QLYD +H Sbjct: 321 ESKGSPSPEKPA---PEQDSKGSSKDKGMDPAFPQLYDQPRH 359
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