BP920140 |
Clone id |
YMU001_000133_E03 |
Library |
YMU01 |
Length |
489 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000133_E03. |
Accession |
BP920140 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2574Contig1 |
Sequence |
ATGCGCGGCCGCGAATTCTTCTATGTTACTTGATATAAGCTCACTGTACATTCTGTACAC ATTAAGCATGTCAAGGTATATGAGGGAGATCTGGGAAAGGAAGGGTTGCCCAAGTGAGCT TGCAACACTAGTATGTGTCTGTAAAATATTAAGAACAGTCCTGATAACCTCATGATCTTA TAGGTAATCTACGCTCTGCCTAGCTTGTCCAATTATTTCTGTCCAACGCTGATTTGGAAG CTCCATAAGCTTCTGCAGGTACTCATCTCGCTTGTGAGGATCTCCTTCAGCTTGAATCAT GAAGCCAACTGCTTCATAAAAAGAATGTATCTGGTGATTTTCCAAATCCATTATGGTCGA TGAGATGCCCTTTAAAAGCTCCATTACAAACGGTTCTGTTTCACCAACCTGAAGTATCAC AAATTTTCTTTTGCACTTTTGCACAATTTTCAGGAATGTATCGCATGCCATGTCCTGCAC TCCTGGGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54EV7 |
Definition |
sp|Q54EV7|XPO1_DICDI Exportin-1 OS=Dictyostelium discoideum |
Align length |
155 |
Score (bit) |
174.0 |
E-value |
2.0e-43 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TLA4 |
Definition |
tr|A9TLA4|A9TLA4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
156 |
Score (bit) |
266.0 |
E-value |
3.0e-70 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920140|Adiantum capillus-veneris mRNA, clone: YMU001_000133_E03. (468 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TLA4|A9TLA4_PHYPA Predicted protein OS=Physcomitrella paten... 266 3e-70 tr|A9S636|A9S636_PHYPA Predicted protein OS=Physcomitrella paten... 263 2e-69 tr|A5BVQ5|A5BVQ5_VITVI Putative uncharacterized protein (Chromos... 258 1e-67 tr|Q9SMV6|Q9SMV6_ARATH Exportin1 (XPO1) protein (Putative export... 251 1e-65 tr|Q9M9N0|Q9M9N0_ARATH Putative exportin1 (XPO1) protein OS=Arab... 242 8e-63 tr|Q94IV0|Q94IV0_ARATH Exportin 1b OS=Arabidopsis thaliana GN=xp... 242 8e-63 tr|Q84M87|Q84M87_ORYSJ Os03g0858100 protein OS=Oryza sativa subs... 233 4e-60 tr|Q10AB7|Q10AB7_ORYSJ Retrotransposon protein, putative, Ty1-co... 233 4e-60 tr|B8ANT2|B8ANT2_ORYSI Putative uncharacterized protein OS=Oryza... 233 4e-60 tr|A3AHY0|A3AHY0_ORYSJ Putative uncharacterized protein OS=Oryza... 233 4e-60 tr|A4RTA6|A4RTA6_OSTLU Predicted protein OS=Ostreococcus lucimar... 207 2e-52 tr|Q01DZ0|Q01DZ0_OSTTA Putative exportin1 protein XPO1 (ISS) OS=... 204 1e-51 tr|A8J2W2|A8J2W2_CHLRE Exportin OS=Chlamydomonas reinhardtii GN=... 202 9e-51 tr|A8PG42|A8PG42_BRUMA Importin-beta N-terminal domain containin... 174 2e-42 tr|A7PR56|A7PR56_VITVI Chromosome chr14 scaffold_26, whole genom... 172 1e-41 tr|Q4T8U7|Q4T8U7_TETNG Chromosome undetermined SCAF7726, whole g... 165 1e-39 tr|A7RWU3|A7RWU3_NEMVE Predicted protein OS=Nematostella vectens... 164 2e-39 tr|B7PJG1|B7PJG1_IXOSC Exportin, putative OS=Ixodes scapularis G... 164 3e-39 tr|Q9PW90|Q9PW90_XENLA CRM1/XPO1 protein OS=Xenopus laevis PE=2 ... 162 6e-39 tr|Q6NS03|Q6NS03_XENLA Xpo1 protein OS=Xenopus laevis GN=xpo1 PE... 162 6e-39 tr|Q9WUW7|Q9WUW7_RAT CRM1 protein (Fragment) OS=Rattus norvegicu... 162 6e-39 tr|Q921J0|Q921J0_MOUSE Xpo1 protein OS=Mus musculus GN=Xpo1 PE=2... 162 6e-39 tr|A2AKT7|A2AKT7_MOUSE Exportin 1, CRM1 homolog (Yeast) OS=Mus m... 162 6e-39 tr|B7ZB16|B7ZB16_HUMAN cDNA, FLJ79380, highly similar to Exporti... 162 6e-39 tr|B4DR01|B4DR01_HUMAN cDNA FLJ55480, highly similar to Exportin... 162 6e-39 tr|B3KWD0|B3KWD0_HUMAN cDNA FLJ42779 fis, clone BRAWH3005300, hi... 162 6e-39 tr|B6QRI4|B6QRI4_PENMA Exportin KapK OS=Penicillium marneffei AT... 160 2e-38 tr|B6M1N5|B6M1N5_BRAFL Putative uncharacterized protein OS=Branc... 160 3e-38 tr|Q2UPG6|Q2UPG6_ASPOR Nuclear transport receptor CRM1/MSN5 OS=A... 158 1e-37 tr|B8MWT5|B8MWT5_ASPFL Exportin KapK OS=Aspergillus flavus NRRL3... 158 1e-37
>tr|A9TLA4|A9TLA4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_147255 PE=4 SV=1 Length = 1077
Score = 266 bits (681), Expect = 3e-70 Identities = 133/156 (85%), Positives = 144/156 (92%) Frame = -1
Query: 468 HPGVQDMACDTFLKIVQKCKRKFVILQVGETEPFVMELLKGISSTIMDLENHQIHSFYEA 289 HPGVQDMACDTFLKIVQKC+RKFVILQVGETEPFV ELLKG+ +TI+DLE HQIH+FYEA Sbjct: 577 HPGVQDMACDTFLKIVQKCRRKFVILQVGETEPFVCELLKGLPTTILDLEAHQIHTFYEA 636
Query: 288 VGFMIQAEGDPHKRDEYLQKLMELPNQRWTEIIGQARQSVDYL*DHEVIRTVLNILQTHT 109 VGFMIQAE DP +RDEYLQKLMELPNQRW EIIGQARQSV+YL EV+R VLNILQ +T Sbjct: 637 VGFMIQAESDPQRRDEYLQKLMELPNQRWVEIIGQARQSVEYLKSVEVVRAVLNILQLNT 696
Query: 108 SVASSLGQPFLSQISLIYLDMLNVYRMYSELISSNI 1 SVASSLGQ FL+QISLIYLDMLNVYRMYSELISS+I Sbjct: 697 SVASSLGQAFLAQISLIYLDMLNVYRMYSELISSSI 732
>tr|A9S636|A9S636_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163030 PE=4 SV=1 Length = 1068
Score = 263 bits (673), Expect = 2e-69 Identities = 131/156 (83%), Positives = 143/156 (91%) Frame = -1
Query: 468 HPGVQDMACDTFLKIVQKCKRKFVILQVGETEPFVMELLKGISSTIMDLENHQIHSFYEA 289 HPGVQDMACDTFLKIVQKC+RKFVILQVGETEPFV ELLKG+ +TI+DLE HQIH+FYEA Sbjct: 572 HPGVQDMACDTFLKIVQKCRRKFVILQVGETEPFVCELLKGLPTTILDLEAHQIHTFYEA 631
Query: 288 VGFMIQAEGDPHKRDEYLQKLMELPNQRWTEIIGQARQSVDYL*DHEVIRTVLNILQTHT 109 VGFMIQAE DP +RDEYLQKLMELPNQRW EII QARQSV+YL EV+R VLNILQ +T Sbjct: 632 VGFMIQAESDPQRRDEYLQKLMELPNQRWVEIINQARQSVEYLKSTEVVRAVLNILQLNT 691
Query: 108 SVASSLGQPFLSQISLIYLDMLNVYRMYSELISSNI 1 SVAS+LGQ FL+QISLIYLDMLNVYRMYSELISS+I Sbjct: 692 SVASALGQSFLAQISLIYLDMLNVYRMYSELISSSI 727
>tr|A5BVQ5|A5BVQ5_VITVI Putative uncharacterized protein (Chromosome chr16 scaffold_10, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00014046001 PE=4 SV=1 Length = 1076
Score = 258 bits (659), Expect = 1e-67 Identities = 128/156 (82%), Positives = 142/156 (91%) Frame = -1
Query: 468 HPGVQDMACDTFLKIVQKCKRKFVILQVGETEPFVMELLKGISSTIMDLENHQIHSFYEA 289 HPGVQDMACDTFLKIVQKCKRKFVI+QVGE EPFV ELL G+ STI DLE HQIH+FYE+ Sbjct: 581 HPGVQDMACDTFLKIVQKCKRKFVIIQVGENEPFVSELLSGLPSTIADLEPHQIHTFYES 640
Query: 288 VGFMIQAEGDPHKRDEYLQKLMELPNQRWTEIIGQARQSVDYL*DHEVIRTVLNILQTHT 109 VG MIQAE DP KRDEYLQ+LMELPNQ+W EIIGQARQSVD+L D +VIRTVLNILQT+T Sbjct: 641 VGHMIQAESDPQKRDEYLQRLMELPNQKWAEIIGQARQSVDFLKDQDVIRTVLNILQTNT 700
Query: 108 SVASSLGQPFLSQISLIYLDMLNVYRMYSELISSNI 1 SVA+SLG FLSQI+LI+LDMLNVYRMYSELIS++I Sbjct: 701 SVATSLGTYFLSQITLIFLDMLNVYRMYSELISNSI 736
>tr|Q9SMV6|Q9SMV6_ARATH Exportin1 (XPO1) protein (Putative exportin1 protein XPO1) OS=Arabidopsis thaliana GN=xpo1 PE=2 SV=1 Length = 1075
Score = 251 bits (641), Expect = 1e-65 Identities = 124/156 (79%), Positives = 139/156 (89%) Frame = -1
Query: 468 HPGVQDMACDTFLKIVQKCKRKFVILQVGETEPFVMELLKGISSTIMDLENHQIHSFYEA 289 HPGVQDMACDTFLKIVQKCKRKFVI+QVGE EPFV ELL G+++T+ DLE HQIHSFYE+ Sbjct: 580 HPGVQDMACDTFLKIVQKCKRKFVIVQVGENEPFVSELLTGLATTVQDLEPHQIHSFYES 639
Query: 288 VGFMIQAEGDPHKRDEYLQKLMELPNQRWTEIIGQARQSVDYL*DHEVIRTVLNILQTHT 109 VG MIQAE DP KRDEYLQ+LM LPNQ+W EIIGQAR SV++L D VIRTVLNILQT+T Sbjct: 640 VGNMIQAESDPQKRDEYLQRLMALPNQKWAEIIGQARHSVEFLKDQVVIRTVLNILQTNT 699
Query: 108 SVASSLGQPFLSQISLIYLDMLNVYRMYSELISSNI 1 S A+SLG FLSQISLI+LDMLNVYRMYSEL+S+NI Sbjct: 700 SAATSLGTYFLSQISLIFLDMLNVYRMYSELVSTNI 735
>tr|Q9M9N0|Q9M9N0_ARATH Putative exportin1 (XPO1) protein OS=Arabidopsis thaliana GN=T17B22.20 PE=4 SV=1 Length = 1022
Score = 242 bits (617), Expect = 8e-63 Identities = 120/156 (76%), Positives = 138/156 (88%) Frame = -1
Query: 468 HPGVQDMACDTFLKIVQKCKRKFVILQVGETEPFVMELLKGISSTIMDLENHQIHSFYEA 289 HPGVQDMACDTFLKIVQKCKRKFVI+QVGE+EPFV ELL G+++ + DL+ HQIH+FYE+ Sbjct: 527 HPGVQDMACDTFLKIVQKCKRKFVIVQVGESEPFVSELLSGLATIVGDLQPHQIHTFYES 586
Query: 288 VGFMIQAEGDPHKRDEYLQKLMELPNQRWTEIIGQARQSVDYL*DHEVIRTVLNILQTHT 109 VG MIQAE DP KR EYLQ+LM LPNQ+W EIIGQARQS D L + +VIRTVLNILQT+T Sbjct: 587 VGSMIQAESDPQKRGEYLQRLMALPNQKWAEIIGQARQSADILKEPDVIRTVLNILQTNT 646
Query: 108 SVASSLGQPFLSQISLIYLDMLNVYRMYSELISSNI 1 VA+SLG FLSQISLI+LDMLNVYRMYSEL+SS+I Sbjct: 647 RVATSLGTFFLSQISLIFLDMLNVYRMYSELVSSSI 682
>tr|Q94IV0|Q94IV0_ARATH Exportin 1b OS=Arabidopsis thaliana GN=xpo1b PE=2 SV=1 Length = 1076
Score = 242 bits (617), Expect = 8e-63 Identities = 120/156 (76%), Positives = 138/156 (88%) Frame = -1
Query: 468 HPGVQDMACDTFLKIVQKCKRKFVILQVGETEPFVMELLKGISSTIMDLENHQIHSFYEA 289 HPGVQDMACDTFLKIVQKCKRKFVI+QVGE+EPFV ELL G+++ + DL+ HQIH+FYE+ Sbjct: 581 HPGVQDMACDTFLKIVQKCKRKFVIVQVGESEPFVSELLSGLATIVGDLQPHQIHTFYES 640
Query: 288 VGFMIQAEGDPHKRDEYLQKLMELPNQRWTEIIGQARQSVDYL*DHEVIRTVLNILQTHT 109 VG MIQAE DP KR EYLQ+LM LPNQ+W EIIGQARQS D L + +VIRTVLNILQT+T Sbjct: 641 VGSMIQAESDPQKRGEYLQRLMALPNQKWAEIIGQARQSADILKEPDVIRTVLNILQTNT 700
Query: 108 SVASSLGQPFLSQISLIYLDMLNVYRMYSELISSNI 1 VA+SLG FLSQISLI+LDMLNVYRMYSEL+SS+I Sbjct: 701 RVATSLGTFFLSQISLIFLDMLNVYRMYSELVSSSI 736
>tr|Q84M87|Q84M87_ORYSJ Os03g0858100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0059G06.10 PE=4 SV=1 Length = 1070
Score = 233 bits (594), Expect = 4e-60 Identities = 117/156 (75%), Positives = 132/156 (84%) Frame = -1
Query: 468 HPGVQDMACDTFLKIVQKCKRKFVILQVGETEPFVMELLKGISSTIMDLENHQIHSFYEA 289 HPGVQDMACDTFLKIVQKCKRKFV QVGE EPFV ELL +++TI DLE HQIH+FYE+ Sbjct: 577 HPGVQDMACDTFLKIVQKCKRKFVTQQVGENEPFVSELLSSLATTIGDLEPHQIHTFYES 636
Query: 288 VGFMIQAEGDPHKRDEYLQKLMELPNQRWTEIIGQARQSVDYL*DHEVIRTVLNILQTHT 109 VG MIQAE D KRDEYL++LM LPNQ+W EIIGQA QS+D L + +VIR+VLNILQT+T Sbjct: 637 VGHMIQAESDNTKRDEYLKRLMSLPNQKWAEIIGQASQSIDILKNQDVIRSVLNILQTNT 696
Query: 108 SVASSLGQPFLSQISLIYLDMLNVYRMYSELISSNI 1 SVASSLG F QISLI+LDML VYRMYSEL+SS I Sbjct: 697 SVASSLGPHFFPQISLIFLDMLTVYRMYSELVSSTI 732
>tr|Q10AB7|Q10AB7_ORYSJ Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica GN=LOC_Os03g64080 PE=4 SV=1 Length = 2074
Score = 233 bits (594), Expect = 4e-60 Identities = 117/156 (75%), Positives = 132/156 (84%) Frame = -1
Query: 468 HPGVQDMACDTFLKIVQKCKRKFVILQVGETEPFVMELLKGISSTIMDLENHQIHSFYEA 289 HPGVQDMACDTFLKIVQKCKRKFV QVGE EPFV ELL +++TI DLE HQIH+FYE+ Sbjct: 541 HPGVQDMACDTFLKIVQKCKRKFVTQQVGENEPFVSELLSSLATTIGDLEPHQIHTFYES 600
Query: 288 VGFMIQAEGDPHKRDEYLQKLMELPNQRWTEIIGQARQSVDYL*DHEVIRTVLNILQTHT 109 VG MIQAE D KRDEYL++LM LPNQ+W EIIGQA QS+D L + +VIR+VLNILQT+T Sbjct: 601 VGHMIQAESDNTKRDEYLKRLMSLPNQKWAEIIGQASQSIDILKNQDVIRSVLNILQTNT 660
Query: 108 SVASSLGQPFLSQISLIYLDMLNVYRMYSELISSNI 1 SVASSLG F QISLI+LDML VYRMYSEL+SS I Sbjct: 661 SVASSLGPHFFPQISLIFLDMLTVYRMYSELVSSTI 696
>tr|B8ANT2|B8ANT2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14416 PE=4 SV=1 Length = 697
Score = 233 bits (594), Expect = 4e-60 Identities = 117/156 (75%), Positives = 132/156 (84%) Frame = -1
Query: 468 HPGVQDMACDTFLKIVQKCKRKFVILQVGETEPFVMELLKGISSTIMDLENHQIHSFYEA 289 HPGVQDMACDTFLKIVQKCKRKFV QVGE EPFV ELL +++TI DLE HQIH+FYE+ Sbjct: 541 HPGVQDMACDTFLKIVQKCKRKFVTQQVGENEPFVSELLSSLATTIGDLEPHQIHTFYES 600
Query: 288 VGFMIQAEGDPHKRDEYLQKLMELPNQRWTEIIGQARQSVDYL*DHEVIRTVLNILQTHT 109 VG MIQAE D KRDEYL++LM LPNQ+W EIIGQA QS+D L + +VIR+VLNILQT+T Sbjct: 601 VGHMIQAESDNTKRDEYLKRLMSLPNQKWAEIIGQASQSIDILKNQDVIRSVLNILQTNT 660
Query: 108 SVASSLGQPFLSQISLIYLDMLNVYRMYSELISSNI 1 SVASSLG F QISLI+LDML VYRMYSEL+SS I Sbjct: 661 SVASSLGPHFFPQISLIFLDMLTVYRMYSELVSSTI 696
>tr|A3AHY0|A3AHY0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010402 PE=4 SV=1 Length = 1034
Score = 233 bits (594), Expect = 4e-60 Identities = 117/156 (75%), Positives = 132/156 (84%) Frame = -1
Query: 468 HPGVQDMACDTFLKIVQKCKRKFVILQVGETEPFVMELLKGISSTIMDLENHQIHSFYEA 289 HPGVQDMACDTFLKIVQKCKRKFV QVGE EPFV ELL +++TI DLE HQIH+FYE+ Sbjct: 541 HPGVQDMACDTFLKIVQKCKRKFVTQQVGENEPFVSELLSSLATTIGDLEPHQIHTFYES 600
Query: 288 VGFMIQAEGDPHKRDEYLQKLMELPNQRWTEIIGQARQSVDYL*DHEVIRTVLNILQTHT 109 VG MIQAE D KRDEYL++LM LPNQ+W EIIGQA QS+D L + +VIR+VLNILQT+T Sbjct: 601 VGHMIQAESDNTKRDEYLKRLMSLPNQKWAEIIGQASQSIDILKNQDVIRSVLNILQTNT 660
Query: 108 SVASSLGQPFLSQISLIYLDMLNVYRMYSELISSNI 1 SVASSLG F QISLI+LDML VYRMYSEL+SS I Sbjct: 661 SVASSLGPHFFPQISLIFLDMLTVYRMYSELVSSTI 696
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