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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920523
Clone id YMU001_000138_B08
Library
Length 335
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AAAATGTGTATTATGTATTCCAGAGTAATGCGTATTTTATAAAGGCCAATATCATCGTTC
CCTAGGAAAACGAAAATCAGCATCGCAGTCCTCAATTCTCCGTGAATGTCTATTTACATA
ACCAAAATTGAATCATGCTTCTTCCAATAGTGAAAATGGTCAAGGATTATCCAGCCTGGG
CTTAATAAGCTCCTCCATAATTCTATGCTCTCTTGTTAAGTTGTAATGTTGCACAACACC
CCATCTTGTACTTGAATGAGAGGTGCTTGGTATAGCACCATATGACATCTTTCTCCCTTA
TGAGAGGTTCTTGGGTAAAGCAATATCTTTCTCCC
■■Homology search results ■■ -
sp_hit_id P74101
Definition sp|P74101|Y1895_SYNY3 Uncharacterized protein sll1895 OS=Synechocystis sp. (strain PCC 6803)
Align length 74
Score (bit) 33.1
E-value 0.44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920523|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_B08.
         (335 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P74101|Y1895_SYNY3 Uncharacterized protein sll1895 OS=Synecho...    33   0.44 
sp|P32710|NRFE_ECOLI Cytochrome c-type biogenesis protein nrfE O...    29   8.4  
sp|Q964R1|CP6J1_BLAGE Cytochrome P450 6j1 OS=Blattella germanica...    29   8.4  

>sp|P74101|Y1895_SYNY3 Uncharacterized protein sll1895
           OS=Synechocystis sp. (strain PCC 6803) GN=sll1895 PE=4
           SV=1
          Length = 696

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 24/74 (32%)
 Frame = -1

Query: 293 ERCHMVLYQAPLIQVQDGVLCNITT*QESIELWR----SLLSPG---------------- 174
           ER   +LY  P+I VQ G LC +    E++  W+     L+SPG                
Sbjct: 447 ERDEFLLYYQPIIDVQSGRLCGV----EALIRWQHPIHGLVSPGLFIGLLETTGLIIPVG 502

Query: 173 -WII---LDHFHYW 144
            WI+     HFH+W
Sbjct: 503 EWIMRTAFQHFHHW 516


>sp|P32710|NRFE_ECOLI Cytochrome c-type biogenesis protein nrfE
           OS=Escherichia coli (strain K12) GN=nrfE PE=3 SV=2
          Length = 552

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = -1

Query: 209 SIELWRSLLSPGWIILDHFHYWKKHDSILVM*IDIHGELRTAMLIFVFLGND 54
           S+ LW  LLS  W  L  +HY ++ D +  + + +   +  A+L+FV L +D
Sbjct: 78  SLLLWVLLLS-AWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSD 128


>sp|Q964R1|CP6J1_BLAGE Cytochrome P450 6j1 OS=Blattella germanica
           GN=CYP6J1 PE=2 SV=1
          Length = 501

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -1

Query: 158 HFHYWKKHDSILVM*IDIHGELRTAMLIFVFLGNDDIGLYKIRITLEYI 12
           HF++WKK   I V  +   G L+  +L   ++G     +Y+  I   Y+
Sbjct: 29  HFNFWKKRGVIYVRPLPFFGNLKDVLLQKKYIGYYLKDIYEENINKPYV 77
tr_hit_id Q3JDQ5
Definition tr|Q3JDQ5|Q3JDQ5_NITOC Putative uncharacterized protein OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Align length 68
Score (bit) 32.7
E-value 9.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920523|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_B08.
         (335 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3JDQ5|Q3JDQ5_NITOC Putative uncharacterized protein OS=Nitro...    33   9.4  
tr|B6C3Y4|B6C3Y4_9GAMM Putative uncharacterized protein OS=Nitro...    33   9.4  
tr|Q7JL40|Q7JL40_CAEEL Pyruvate kinase OS=Caenorhabditis elegans...    33   9.4  
tr|Q3S1I8|Q3S1I8_CAEEL Pyruvate kinase OS=Caenorhabditis elegans...    33   9.4  
tr|O17836|O17836_CAEEL Pyruvate kinase OS=Caenorhabditis elegans...    33   9.4  
tr|O17835|O17835_CAEEL Pyruvate kinase OS=Caenorhabditis elegans...    33   9.4  
tr|B7WNA0|B7WNA0_CAEEL Putative uncharacterized protein OS=Caeno...    33   9.4  
tr|Q4P706|Q4P706_USTMA Putative uncharacterized protein OS=Ustil...    33   9.4  

>tr|Q3JDQ5|Q3JDQ5_NITOC Putative uncharacterized protein
           OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB
           11848) GN=Noc_0518 PE=3 SV=1
          Length = 490

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
 Frame = -3

Query: 282 YGAIPSTSHSSTRWGVVQHYN---LTREHRIMEELIKPRLDNP*PFSLLEEA*FNFGYVN 112
           +G      H+ T WG V H+N    T E +       PRL+NP  F +   A   FG +N
Sbjct: 282 FGLAGVNLHTWTGWGSVPHWNAFVATLEMQGKGRFFDPRLNNPEQFPI--AAAMGFGNLN 339

Query: 111 RHSRRIED 88
            H    ED
Sbjct: 340 EHIDPEED 347


>tr|B6C3Y4|B6C3Y4_9GAMM Putative uncharacterized protein
           OS=Nitrosococcus oceani AFC27 GN=NOC27_2385 PE=4 SV=1
          Length = 490

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
 Frame = -3

Query: 282 YGAIPSTSHSSTRWGVVQHYN---LTREHRIMEELIKPRLDNP*PFSLLEEA*FNFGYVN 112
           +G      H+ T WG V H+N    T E +       PRL+NP  F +   A   FG +N
Sbjct: 282 FGLAGVNLHTWTGWGSVPHWNAFVATLEMQGKGRFFDPRLNNPEQFPI--AAAMGFGNLN 339

Query: 111 RHSRRIED 88
            H    ED
Sbjct: 340 EHIDPEED 347


>tr|Q7JL40|Q7JL40_CAEEL Pyruvate kinase OS=Caenorhabditis elegans
           GN=F25H5.3 PE=2 SV=1
          Length = 531

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -1

Query: 332 RKILLYPRTSHKGERCHMVLYQAPLIQVQDGVLCNITT*QESIELWRSLLSPG 174
           +K+   P T+H    C + + +AP +  Q G++C I     S+E+ + L+  G
Sbjct: 20  QKLAAVPATTHMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNG 72


>tr|Q3S1I8|Q3S1I8_CAEEL Pyruvate kinase OS=Caenorhabditis elegans
           GN=F25H5.3 PE=2 SV=1
          Length = 558

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -1

Query: 332 RKILLYPRTSHKGERCHMVLYQAPLIQVQDGVLCNITT*QESIELWRSLLSPG 174
           +K+   P T+H    C + + +AP +  Q G++C I     S+E+ + L+  G
Sbjct: 47  QKLAAVPATTHMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNG 99


>tr|O17836|O17836_CAEEL Pyruvate kinase OS=Caenorhabditis elegans
           GN=F25H5.3 PE=2 SV=1
          Length = 562

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -1

Query: 332 RKILLYPRTSHKGERCHMVLYQAPLIQVQDGVLCNITT*QESIELWRSLLSPG 174
           +K+   P T+H    C + + +AP +  Q G++C I     S+E+ + L+  G
Sbjct: 51  QKLAAVPATTHMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNG 103


>tr|O17835|O17835_CAEEL Pyruvate kinase OS=Caenorhabditis elegans
           GN=F25H5.3 PE=1 SV=1
          Length = 600

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -1

Query: 332 RKILLYPRTSHKGERCHMVLYQAPLIQVQDGVLCNITT*QESIELWRSLLSPG 174
           +K+   P T+H    C + + +AP +  Q G++C I     S+E+ + L+  G
Sbjct: 89  QKLAAVPATTHMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNG 141


>tr|B7WNA0|B7WNA0_CAEEL Putative uncharacterized protein
           OS=Caenorhabditis elegans GN=F25H5.3e PE=4 SV=1
          Length = 913

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -1

Query: 332 RKILLYPRTSHKGERCHMVLYQAPLIQVQDGVLCNITT*QESIELWRSLLSPG 174
           +K+   P T+H    C + + +AP +  Q G++C I     S+E+ + L+  G
Sbjct: 402 QKLAAVPATTHMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNG 454


>tr|Q4P706|Q4P706_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM04107.1 PE=4 SV=1
          Length = 714

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = -1

Query: 326 ILLYPRTSHKGERCHMVLYQAP--LIQVQDGVLCNITT*QESIELWRSLLSPGWIILDHF 153
           +L+ PR S  G+ C  +  Q P   + +Q+    ++TT Q+ + +     SP  I   H 
Sbjct: 256 VLVIPRESIDGQSCVRLYCQLPDMPLSIQEPASSDVTTLQQVLHVVNDTFSPFKIRFQHV 315

Query: 152 HYWKKH--DSILVM*IDIHGEL 93
           H++  +     LV  +D+ G +
Sbjct: 316 HWFTVYTVSQRLVSALDVQGRI 337