BP920809 [AcEST]

BP920809
Clone id	YMU001_000142_A05
Library	YMU01
Length	507
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000142_A05.
Accession	BP920809
Tissue type	prothallium
Developmental stage	-
Contig ID	CL2081Contig1
Sequence	CTCGCTATGCTGACGTCCGTCGCGGGGTATCCGTTCAACATTGGTGCCGCTGTCGGGGAC GAAAACCTTAGGTAGGTGACCGAGACTAGTCCTTGAGGATAGGAATTCTTTGGCTTTCCA AGAGTCTCGTTTTACATTTAGATAGGATCAGAGGGTGGAGGACTCTCCAGGTCTTAGAGG GAGTCTAGGGAGCGTGTGTTTGGCCTATATCCTTTGACTTAGGTAGACTTAGGTACTTTT TAGTTAAGTTGTGGTGTAGAGAGTAGGAGTTGGAGTGGTAGAAACGGTGAGAGGAAAGCT TGACAGGCCAGGAAGCAACCAAAACACCATTATCACCATTTCACATGAGGAGTAGGAGTA GAGTAAGTAGGACATCATGATTCAGAATCTAGAGCACTTCATGCATGTATACTTGCTTGT TAGATTCATGACGAGGTTGTAAAAGACGCAAAAGTGTGTTTGAAAGCTGAAGTGAAGTCC AAAAGTTATCGTGAGTGCTTCTGATAG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P0A5F4
Definition	sp\|P0A5F4\|Y1617_MYCBO Uncharacterized protein Mb1617 OS=Mycobacterium bovis
Align length	31
Score (bit)	29.6
E-value	8.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920809\|Adiantum capillus-veneris mRNA, clone: YMU001_000142_A05. (507 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P0A5F4\|Y1617_MYCBO Uncharacterized protein Mb1617 OS=Mycobact... 30 8.4 sp\|P0A5F3\|Y1591_MYCTU Uncharacterized protein Rv1591/MT1626 OS=M... 30 8.4 >sp\|P0A5F4\|Y1617_MYCBO Uncharacterized protein Mb1617 OS=Mycobacterium bovis GN=Mb1617 PE=4 SV=1 Length = 193 Score = 29.6 bits (65), Expect = 8.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 101 YPQGLVSVTYLRFSSPTAAPMLNGYPATDVS 9 +P G+ S+ Y ++ TA L GYPA D S Sbjct: 147 WPAGIASLVYALLAAGTARDDLGGYPAVDPS 177 >sp\|P0A5F3\|Y1591_MYCTU Uncharacterized protein Rv1591/MT1626 OS=Mycobacterium tuberculosis GN=Rv1591 PE=4 SV=1 Length = 193 Score = 29.6 bits (65), Expect = 8.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 101 YPQGLVSVTYLRFSSPTAAPMLNGYPATDVS 9 +P G+ S+ Y ++ TA L GYPA D S Sbjct: 147 WPAGIASLVYALLAAGTARDDLGGYPAVDPS 177
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A7Q2R7
Definition	tr\|A7Q2R7\|A7Q2R7_VITVI Chromosome chr1 scaffold_46, whole genome shotgun sequence OS=Vitis vinifera
Align length	50
Score (bit)	33.5
E-value	6.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920809\|Adiantum capillus-veneris mRNA, clone: YMU001_000142_A05. (507 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A7Q2R7\|A7Q2R7_VITVI Chromosome chr1 scaffold_46, whole genome... 33 6.1 >tr\|A7Q2R7\|A7Q2R7_VITVI Chromosome chr1 scaffold_46, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028988001 PE=4 SV=1 Length = 846 Score = 33.5 bits (75), Expect = 6.1 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = -1 Query: 198 HTLPRLPLRPGESSTL*SYLNVKRDSWKAKEFLSSRTSLGHLPKVFVPDS 49 H+LP LPLR GE + L +WK + + HLP+ F P S Sbjct: 566 HSLPNLPLRRGEEHSF--ILKPATSAWKRLKAQRESSQSSHLPEAFHPRS 613