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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920929
Clone id YMU001_000143_E04
Library
Length 540
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000143_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTCCCTCCAACATCTTTAGCAGGGCCTGCTGCACACCTTCTCCTGACACATCTCTACTAA
TGTTTACACTTTCCGCCTTCTTTGTGATTTTATCCACCTCATCAATGTAAACAATGCCCT
GTTGAGCAGTTGGAACGTTAAATTCAGCAACCGTAAGCAGTTTGTACAAAATAGACTCCA
CATCTTCTCCAACATACCCAGCCTGAGTAAGGGTTGTGGCATCTGCAATAACAAAGGGCA
CATTAACAAACTTGGCCAACGTTTTTGCCAGCAAGGTTTTCCCTGAGCCAGTAGGACCCA
TGAGAAGCACATTACTCTTCTCTAACTCAACATAGTCACCATCTTCATCCTCTTCATCAA
ACAAATTTGAACCTAATCCAACCCCCCTTTCAGCCTTGAAATTTCCCTTTGACAAAGACT
CATAATAAATACGTTTATAATGATTGTACACAGCAACTGATAAGACCTTTTTTGCGCGGT
CCTGTCCAATTACAAATTTGTCAAGAGCCGTGCGAATCTCCTTCGGAGTGGGAAGATCTT
■■Homology search results ■■ -
sp_hit_id Q74JU4
Definition sp|Q74JU4|CLPX_LACJO ATP-dependent Clp protease ATP-binding subunit clpX OS=Lactobacillus johnsonii
Align length 179
Score (bit) 213.0
E-value 6.0e-55
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920929|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_E04.
         (540 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q74JU4|CLPX_LACJO ATP-dependent Clp protease ATP-binding subu...   213   6e-55
sp|Q042T7|CLPX_LACGA ATP-dependent Clp protease ATP-binding subu...   212   8e-55
sp|A4XHW1|CLPX_CALS8 ATP-dependent Clp protease ATP-binding subu...   212   1e-54
sp|Q55510|CLPX_SYNY3 ATP-dependent Clp protease ATP-binding subu...   211   1e-54
sp|Q8RC24|CLPX_THETN ATP-dependent Clp protease ATP-binding subu...   211   2e-54
sp|Q88KI9|CLPX_PSEPK ATP-dependent Clp protease ATP-binding subu...   210   4e-54
sp|B0KJG7|CLPX_PSEPG ATP-dependent Clp protease ATP-binding subu...   210   4e-54
sp|A5W634|CLPX_PSEP1 ATP-dependent Clp protease ATP-binding subu...   210   4e-54
sp|Q8FN57|CLPX_COREF ATP-dependent Clp protease ATP-binding subu...   210   4e-54
sp|A5WC69|CLPX_PSYWF ATP-dependent Clp protease ATP-binding subu...   209   7e-54
sp|Q82Y56|CLPX_NITEU ATP-dependent Clp protease ATP-binding subu...   209   7e-54
sp|Q1LM63|CLPX_RALME ATP-dependent Clp protease ATP-binding subu...   209   9e-54
sp|Q3A3X6|CLPX_PELCD ATP-dependent Clp protease ATP-binding subu...   209   9e-54
sp|Q13Z14|CLPX_BURXL ATP-dependent Clp protease ATP-binding subu...   209   9e-54
sp|Q1Q8J1|CLPX_PSYCK ATP-dependent Clp protease ATP-binding subu...   208   1e-53
sp|Q9I2U0|CLPX_PSEAE ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|Q02KU5|CLPX_PSEAB ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|A6V718|CLPX_PSEA7 ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|Q47FB7|CLPX_DECAR ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|A4JF04|CLPX_BURVG ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|Q2SWQ5|CLPX_BURTA ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|Q39FE9|CLPX_BURS3 ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|Q63V40|CLPX_BURPS ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|A3NAI4|CLPX_BURP6 ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|A3NWA5|CLPX_BURP0 ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|Q0BEF7|CLPX_BURCM ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|A0K846|CLPX_BURCH ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|Q1BH84|CLPX_BURCA ATP-dependent Clp protease ATP-binding subu...   208   2e-53
sp|Q2JW64|CLPX_SYNJA ATP-dependent Clp protease ATP-binding subu...   207   2e-53
sp|Q48U22|CLPX_STRPM ATP-dependent Clp protease ATP-binding subu...   207   2e-53

>sp|Q74JU4|CLPX_LACJO ATP-dependent Clp protease ATP-binding subunit
           clpX OS=Lactobacillus johnsonii GN=clpX PE=3 SV=1
          Length = 421

 Score =  213 bits (541), Expect = 6e-55
 Identities = 112/179 (62%), Positives = 136/179 (75%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           DLP P EI+  LD++VIGQDRAKKVLSVAVYNHYKRI                       
Sbjct: 60  DLPKPMEIKKQLDEYVIGQDRAKKVLSVAVYNHYKRI----------------------- 96

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDV 179
            + D D    EL+KSN+ L+GPTGSGKT LA+TLAK +NVPF IADATTLT+AGYVGEDV
Sbjct: 97  SQMDIDSTGTELQKSNIALIGPTGSGKTYLAQTLAKILNVPFAIADATTLTEAGYVGEDV 156

Query: 178 ESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           E+IL KLL  A++++  AQ+GI+YIDE+DKI+KKAE+V+I+RDVSGEGVQQ+LLK+LEG
Sbjct: 157 ENILLKLLQNADYDIERAQRGIIYIDEIDKISKKAENVSITRDVSGEGVQQSLLKILEG 215


>sp|Q042T7|CLPX_LACGA ATP-dependent Clp protease ATP-binding subunit
           clpX OS=Lactobacillus gasseri (strain ATCC 33323 / DSM
           20243) GN=clpX PE=3 SV=1
          Length = 421

 Score =  212 bits (540), Expect = 8e-55
 Identities = 112/179 (62%), Positives = 136/179 (75%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           DLP P EI+  LD++VIGQDRAKKVLSVAVYNHYKRI                       
Sbjct: 60  DLPKPMEIKKQLDEYVIGQDRAKKVLSVAVYNHYKRI----------------------- 96

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDV 179
            + D D    EL+KSN+ L+GPTGSGKT LA+TLAK +NVPF IADATTLT+AGYVGEDV
Sbjct: 97  SQMDIDSSGTELQKSNIALIGPTGSGKTYLAQTLAKILNVPFAIADATTLTEAGYVGEDV 156

Query: 178 ESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           E+IL KLL  A++++  AQ+GI+YIDE+DKI+KKAE+V+I+RDVSGEGVQQ+LLK+LEG
Sbjct: 157 ENILLKLLQNADYDLERAQRGIIYIDEIDKISKKAENVSITRDVSGEGVQQSLLKILEG 215


>sp|A4XHW1|CLPX_CALS8 ATP-dependent Clp protease ATP-binding subunit
           clpX OS=Caldicellulosiruptor saccharolyticus (strain
           ATCC 43494 / DSM 8903) GN=clpX PE=3 SV=1
          Length = 433

 Score =  212 bits (539), Expect = 1e-54
 Identities = 107/178 (60%), Positives = 137/178 (76%)
 Frame = -3

Query: 535 LPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLFD 356
           LPTPKEI+  LD++V+GQD AKK+LSVAVYNHYKRIYY                      
Sbjct: 61  LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYH--------------------- 99

Query: 355 EEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDVE 176
             D   D VE++KSN+L++GPTGSGKT LA+TLAK +NVPF IADATTLT+AGYVGEDVE
Sbjct: 100 --DNRKDDVEIQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVE 157

Query: 175 SILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           +IL +L+  A++++  A++GIVYIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEG
Sbjct: 158 NILLRLIQNADYDIERAERGIVYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEG 215


>sp|Q55510|CLPX_SYNY3 ATP-dependent Clp protease ATP-binding subunit
           clpX OS=Synechocystis sp. (strain PCC 6803) GN=clpX PE=3
           SV=1
          Length = 445

 Score =  211 bits (538), Expect = 1e-54
 Identities = 112/181 (61%), Positives = 139/181 (76%), Gaps = 2/181 (1%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           +LP P  I+  LD++VIGQD AKKVLSVAVYNHYKR+                    NL 
Sbjct: 79  ELPKPTAIKQYLDEYVIGQDEAKKVLSVAVYNHYKRL--------------------NLL 118

Query: 358 D--EEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGE 185
           +  +E + GD VEL+KSN+LL+GPTGSGKTLLA+TLAK + VPF +ADATTLT+AGYVGE
Sbjct: 119 ERNQEIDPGDAVELQKSNILLVGPTGSGKTLLAQTLAKILEVPFAVADATTLTEAGYVGE 178

Query: 184 DVESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLE 5
           DVE+IL +LL VA+ +V  AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLE
Sbjct: 179 DVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLE 238

Query: 4   G 2
           G
Sbjct: 239 G 239


>sp|Q8RC24|CLPX_THETN ATP-dependent Clp protease ATP-binding subunit
           clpX OS=Thermoanaerobacter tengcongensis GN=clpX PE=3
           SV=1
          Length = 425

 Score =  211 bits (536), Expect = 2e-54
 Identities = 110/179 (61%), Positives = 138/179 (77%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           DLP PKEI+  LD++VIGQDRAKK L+VAVYNHYKRI        N K +          
Sbjct: 59  DLPKPKEIKAFLDQYVIGQDRAKKALAVAVYNHYKRI--------NSKVK---------- 100

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDV 179
                  D VEL+KSN+LL+GPTGSGKTLLA+TLAK +NVPF IADATTLT+AGYVGEDV
Sbjct: 101 ------SDDVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATTLTEAGYVGEDV 154

Query: 178 ESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           E+IL +L+  A++++  A++GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEG
Sbjct: 155 ENILLRLIQAADYDIERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEG 213


>sp|Q88KI9|CLPX_PSEPK ATP-dependent Clp protease ATP-binding subunit
           clpX OS=Pseudomonas putida (strain KT2440) GN=clpX PE=3
           SV=1
          Length = 442

 Score =  210 bits (534), Expect = 4e-54
 Identities = 108/178 (60%), Positives = 138/178 (77%)
 Frame = -3

Query: 535 LPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLFD 356
           LP+PKEI   LD++VIGQ+RAKKVL+VAVYNHYKR+                       +
Sbjct: 80  LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-----------------------N 116

Query: 355 EEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDVE 176
           + D+ GD VEL KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE
Sbjct: 117 QRDKKGDEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE 176

Query: 175 SILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           +I+ KLL   +++V  AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EG
Sbjct: 177 NIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEG 234


>sp|B0KJG7|CLPX_PSEPG ATP-dependent Clp protease ATP-binding subunit
           clpX OS=Pseudomonas putida (strain GB-1) GN=clpX PE=3
           SV=1
          Length = 427

 Score =  210 bits (534), Expect = 4e-54
 Identities = 108/178 (60%), Positives = 138/178 (77%)
 Frame = -3

Query: 535 LPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLFD 356
           LP+PKEI   LD++VIGQ+RAKKVL+VAVYNHYKR+                       +
Sbjct: 65  LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-----------------------N 101

Query: 355 EEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDVE 176
           + D+ GD VEL KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE
Sbjct: 102 QRDKKGDEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE 161

Query: 175 SILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           +I+ KLL   +++V  AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EG
Sbjct: 162 NIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEG 219


>sp|A5W634|CLPX_PSEP1 ATP-dependent Clp protease ATP-binding subunit
           clpX OS=Pseudomonas putida (strain F1 / ATCC 700007)
           GN=clpX PE=3 SV=1
          Length = 427

 Score =  210 bits (534), Expect = 4e-54
 Identities = 108/178 (60%), Positives = 138/178 (77%)
 Frame = -3

Query: 535 LPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLFD 356
           LP+PKEI   LD++VIGQ+RAKKVL+VAVYNHYKR+                       +
Sbjct: 65  LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRL-----------------------N 101

Query: 355 EEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDVE 176
           + D+ GD VEL KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE
Sbjct: 102 QRDKKGDEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE 161

Query: 175 SILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           +I+ KLL   +++V  AQ GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EG
Sbjct: 162 NIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEG 219


>sp|Q8FN57|CLPX_COREF ATP-dependent Clp protease ATP-binding subunit
           clpX OS=Corynebacterium efficiens GN=clpX PE=3 SV=1
          Length = 426

 Score =  210 bits (534), Expect = 4e-54
 Identities = 112/179 (62%), Positives = 140/179 (78%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           +LP P EI   LDK+V+GQD+AK++LSVAVYNHYKR+          +A   +G G    
Sbjct: 62  ELPKPSEISAFLDKYVVGQDQAKRILSVAVYNHYKRL----------RAHEQIG-GRRRR 110

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDV 179
           DEED      EL KSN+LL+GPTGSGKT LA+TLAK ++VPF IADAT+LT+AGYVGEDV
Sbjct: 111 DEED-----TELIKSNILLLGPTGSGKTYLAQTLAKLLDVPFAIADATSLTEAGYVGEDV 165

Query: 178 ESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           E+IL KLL  A+F+V  AQ+GI+YIDEVDKI++K+E+ +I+RDVSGEGVQQALLK+LEG
Sbjct: 166 ENILLKLLQAADFDVERAQRGIIYIDEVDKISRKSENPSITRDVSGEGVQQALLKILEG 224


>sp|A5WC69|CLPX_PSYWF ATP-dependent Clp protease ATP-binding subunit
           clpX OS=Psychrobacter sp. (strain PRwf-1) GN=clpX PE=3
           SV=1
          Length = 425

 Score =  209 bits (532), Expect = 7e-54
 Identities = 109/179 (60%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
 Frame = -3

Query: 535 LPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYES-LSKGNFKAERGVGLGSNLF 359
           LPTPKEIR  LD +VIGQ+ AKK LSVAVYNHYKR+   + L++   +A+ G        
Sbjct: 65  LPTPKEIREHLDGYVIGQETAKKALSVAVYNHYKRLKVAAKLAEDKKQAKLGA------- 117

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDV 179
                D   VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDV
Sbjct: 118 -----DDAMVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFAMADATTLTEAGYVGEDV 172

Query: 178 ESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           E+I+ KLL  A+++V  A+QGI+Y+DE+DKI+KK E+++I+RDVSGEGVQQALLK++EG
Sbjct: 173 ENIVQKLLQAADYDVEKAEQGIIYVDEIDKISKKGENMSITRDVSGEGVQQALLKLIEG 231
tr_hit_id B8ADZ4
Definition tr|B8ADZ4|B8ADZ4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 179
Score (bit) 278.0
E-value 1.0e-73
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920929|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_E04.
         (540 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8ADZ4|B8ADZ4_ORYSI Putative uncharacterized protein OS=Oryza...   278   1e-73
tr|B7FAD8|B7FAD8_ORYSJ cDNA, clone: J100065N04, full insert sequ...   278   1e-73
tr|A9T632|A9T632_PHYPA Predicted protein (Fragment) OS=Physcomit...   270   4e-71
tr|A9T4I1|A9T4I1_PHYPA Predicted protein (Fragment) OS=Physcomit...   270   4e-71
tr|A7Q7Q4|A7Q7Q4_VITVI Chromosome chr18 scaffold_61, whole genom...   266   7e-70
tr|Q9FK07|Q9FK07_ARATH ATP-dependent Clp protease regulatory sub...   263   6e-69
tr|Q6Z7F0|Q6Z7F0_ORYSJ Putative ATP-dependent Clp protease ATP-b...   261   1e-68
tr|A9SNL6|A9SNL6_PHYPA Predicted protein (Fragment) OS=Physcomit...   261   2e-68
tr|O48566|O48566_ARATH CLP protease regulatory subunit CLPX OS=A...   259   5e-68
tr|Q66GN9|Q66GN9_ARATH At1g33360 OS=Arabidopsis thaliana GN=At1g...   259   8e-68
tr|Q9C874|Q9C874_ARATH CLP protease regulatory subunit CLPX, put...   258   1e-67
tr|A5AH95|A5AH95_VITVI Putative uncharacterized protein OS=Vitis...   256   5e-67
tr|Q9C814|Q9C814_ARATH CLP protease regulatory subunit CLPX, put...   256   7e-67
tr|Q6KAC2|Q6KAC2_ORYSJ Putative ATP-dependent Clp protease ATP-b...   253   3e-66
tr|A3A5S6|A3A5S6_ORYSJ Putative uncharacterized protein OS=Oryza...   253   3e-66
tr|B6SSC5|B6SSC5_MAIZE ATP-dependent Clp protease ATP-binding su...   253   4e-66
tr|A7QF37|A7QF37_VITVI Chromosome chr16 scaffold_86, whole genom...   250   3e-65
tr|Q5N8G6|Q5N8G6_ORYSJ Putative CLP protease regulatory subunit ...   246   4e-64
tr|A7QCD6|A7QCD6_VITVI Chromosome undetermined scaffold_77, whol...   241   2e-62
tr|B8A7C1|B8A7C1_ORYSI Putative uncharacterized protein OS=Oryza...   240   3e-62
tr|Q0E0B4|Q0E0B4_ORYSJ Os02g0564400 protein OS=Oryza sativa subs...   239   7e-62
tr|A3A837|A3A837_ORYSJ Putative uncharacterized protein OS=Oryza...   239   7e-62
tr|Q9LTA9|Q9LTA9_ARATH CLP protease regulatory subunit CLPX-like...   235   1e-60
tr|B4FQL3|B4FQL3_MAIZE Putative uncharacterized protein OS=Zea m...   233   4e-60
tr|A4RRW1|A4RRW1_OSTLU Mitochondrial ClpX chaperone OS=Ostreococ...   222   1e-56
tr|Q01FQ6|Q01FQ6_OSTTA CLP protease regulatory subunit CLPX (ISS...   216   5e-55
tr|Q4C1D9|Q4C1D9_CROWT ClpX, ATPase regulatory subunit OS=Crocos...   214   2e-54
tr|B6Y2R0|B6Y2R0_ANATH ATP-dependent Clp protease, ATP-binding s...   213   4e-54
tr|Q6UE08|Q6UE08_LACJO Clp protease OS=Lactobacillus johnsonii P...   213   7e-54
tr|B7JW74|B7JW74_SYNP8 ATP-dependent Clp protease, ATP-binding s...   213   7e-54

>tr|B8ADZ4|B8ADZ4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07697 PE=4 SV=1
          Length = 645

 Score =  278 bits (711), Expect = 1e-73
 Identities = 149/179 (83%), Positives = 158/179 (88%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           DLPTPKEI   LDK+VIGQDRAKKVLSVAVYNHYKRIY++SL KG+     G  LG   F
Sbjct: 228 DLPTPKEICQGLDKYVIGQDRAKKVLSVAVYNHYKRIYHKSLQKGS-----GADLGG--F 280

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDV 179
           D E +D D VELEKSNVLLMGPTGSGKTLLAKTLA+FVNVPFVIADATTLTQAGYVGEDV
Sbjct: 281 DGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 340

Query: 178 ESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           ESILYKLL VA+FNV  AQQG+VYIDEVDKITKKAES+NISRDVSGEGVQQALLKMLEG
Sbjct: 341 ESILYKLLAVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 399


>tr|B7FAD8|B7FAD8_ORYSJ cDNA, clone: J100065N04, full insert
           sequence OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 645

 Score =  278 bits (711), Expect = 1e-73
 Identities = 149/179 (83%), Positives = 158/179 (88%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           DLPTPKEI   LDK+VIGQDRAKKVLSVAVYNHYKRIY++SL KG+     G  LG   F
Sbjct: 228 DLPTPKEICQGLDKYVIGQDRAKKVLSVAVYNHYKRIYHKSLQKGS-----GADLGG--F 280

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDV 179
           D E +D D VELEKSNVLLMGPTGSGKTLLAKTLA+FVNVPFVIADATTLTQAGYVGEDV
Sbjct: 281 DGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 340

Query: 178 ESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           ESILYKLL VA+FNV  AQQG+VYIDEVDKITKKAES+NISRDVSGEGVQQALLKMLEG
Sbjct: 341 ESILYKLLAVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 399


>tr|A9T632|A9T632_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_11431 PE=4 SV=1
          Length = 392

 Score =  270 bits (690), Expect = 4e-71
 Identities = 142/179 (79%), Positives = 154/179 (86%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           DLPTP+EI  ALDKFV+GQ+RAKK+LSVAVYNHYKRIY+ES+ KG+              
Sbjct: 9   DLPTPREICQALDKFVVGQERAKKILSVAVYNHYKRIYHESVQKGS-------------- 54

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDV 179
               E+ D VELEKSNVLLMGPTGSGKTLLAKTLA+FVNVPF+IADATTLTQAGYVGEDV
Sbjct: 55  ----EEDDVVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFIIADATTLTQAGYVGEDV 110

Query: 178 ESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           ESILYKLL V+EFNVP AQQGIVYIDEVDKITKKAESV+ISRDVSGEGVQQALLKMLEG
Sbjct: 111 ESILYKLLMVSEFNVPAAQQGIVYIDEVDKITKKAESVSISRDVSGEGVQQALLKMLEG 169


>tr|A9T4I1|A9T4I1_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_12072 PE=4 SV=1
          Length = 433

 Score =  270 bits (690), Expect = 4e-71
 Identities = 146/192 (76%), Positives = 159/192 (82%), Gaps = 13/192 (6%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKK------------VLSVAVYNHYKRIYYESLSKGNFK 395
           +LPTP+EI  ALDKFV+GQ++AKK            +LSVAVYNHYKRI+YESL K N +
Sbjct: 22  ELPTPREISQALDKFVVGQEKAKKAFSLFPSFNSLAILSVAVYNHYKRIHYESLLKSNIR 81

Query: 394 -AERGVGLGSNLFDEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADA 218
             + G G      D EDE+ D VELEKSNVLLMGPTGSGKTLLAKTLA+FVNVPFVIADA
Sbjct: 82  LTDEGAGHS----DMEDEENDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADA 137

Query: 217 TTLTQAGYVGEDVESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGE 38
           TTLTQAGYVGEDVESILYKLL  AEFNVP AQQGIVYIDEVDKITKKAE++NISRDVSGE
Sbjct: 138 TTLTQAGYVGEDVESILYKLLMAAEFNVPAAQQGIVYIDEVDKITKKAENMNISRDVSGE 197

Query: 37  GVQQALLKMLEG 2
           GVQQALLKMLEG
Sbjct: 198 GVQQALLKMLEG 209


>tr|A7Q7Q4|A7Q7Q4_VITVI Chromosome chr18 scaffold_61, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00031954001
           PE=4 SV=1
          Length = 595

 Score =  266 bits (679), Expect = 7e-70
 Identities = 144/179 (80%), Positives = 150/179 (83%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           DLPTPKEI   LDKFVIGQ+RAKKVLSVAVYNHYKRIY+ SL KG               
Sbjct: 266 DLPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIYHGSLQKGLV------------- 312

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDV 179
                D D VELEKSNVLLMGPTGSGKTLLAKTLA+FVNVPFVIADATTLTQAGYVGEDV
Sbjct: 313 -----DDDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 367

Query: 178 ESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           ESILYKLLTVAEFNV  AQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEG
Sbjct: 368 ESILYKLLTVAEFNVQAAQQGMVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEG 426


>tr|Q9FK07|Q9FK07_ARATH ATP-dependent Clp protease regulatory
           subunit CLPX (Putative ATP-dependent Clp protease
           ATP-binding subunit ClpX1) OS=Arabidopsis thaliana
           GN=At5g53350 PE=2 SV=1
          Length = 579

 Score =  263 bits (671), Expect = 6e-69
 Identities = 142/179 (79%), Positives = 153/179 (85%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           D PTPKEI   L+KFVIGQ+RAKKVLSVAVYNHYKRIY+ES  K      R  G   +  
Sbjct: 157 DFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQK------RSAGETDSTA 210

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDV 179
            +  +D D VELEKSN+LLMGPTGSGKTLLAKTLA+FVNVPFVIADATTLTQAGYVGEDV
Sbjct: 211 AKPADD-DMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 269

Query: 178 ESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           ESILYKLLTVA++NV  AQQGIVYIDEVDKITKKAES+NISRDVSGEGVQQALLKMLEG
Sbjct: 270 ESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 328


>tr|Q6Z7F0|Q6Z7F0_ORYSJ Putative ATP-dependent Clp protease
           ATP-binding subunit ClpX1 (CLPX) OS=Oryza sativa subsp.
           japonica GN=P0020C11.15 PE=4 SV=1
          Length = 666

 Score =  261 bits (668), Expect = 1e-68
 Identities = 149/200 (74%), Positives = 158/200 (79%), Gaps = 21/200 (10%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           DLPTPKEI   LDK+VIGQDRAKKVLSVAVYNHYKRIY++SL KG+     G  LG   F
Sbjct: 228 DLPTPKEICQGLDKYVIGQDRAKKVLSVAVYNHYKRIYHKSLQKGS-----GADLGG--F 280

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLT--------- 206
           D E +D D VELEKSNVLLMGPTGSGKTLLAKTLA+FVNVPFVIADATTLT         
Sbjct: 281 DGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAIPKVKLN 340

Query: 205 -----QAGYVGEDVESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKK-------AESVN 62
                QAGYVGEDVESILYKLL VA+FNV  AQQG+VYIDEVDKITKK       AES+N
Sbjct: 341 SCAFLQAGYVGEDVESILYKLLAVADFNVQAAQQGMVYIDEVDKITKKADVFNMQAESLN 400

Query: 61  ISRDVSGEGVQQALLKMLEG 2
           ISRDVSGEGVQQALLKMLEG
Sbjct: 401 ISRDVSGEGVQQALLKMLEG 420


>tr|A9SNL6|A9SNL6_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_132841 PE=4 SV=1
          Length = 446

 Score =  261 bits (666), Expect = 2e-68
 Identities = 142/181 (78%), Positives = 154/181 (85%), Gaps = 3/181 (1%)
 Frame = -3

Query: 535 LPTPKEIRTALDKFVIGQDRAKK--VLSVAVYNHYKRIYYESLSKGNFK-AERGVGLGSN 365
           LPTP+EI  ALDKFV+GQ++AKK  +LSVAVYNHYKRIY+ES+ KGN K    G G+   
Sbjct: 10  LPTPREICQALDKFVVGQEQAKKARILSVAVYNHYKRIYFESMRKGNAKPTNEGFGVSEV 69

Query: 364 LFDEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGE 185
             +E D     VELEKSNVLLMGPTGSGKTLLAKTLA+FVNVPFVIADAT+LTQAGYVGE
Sbjct: 70  ECEEND-----VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGE 124

Query: 184 DVESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLE 5
           DVESILYKLL  AEFNV  AQQGI+YIDEVDKITKKAES NISRDVSGEGVQQALLKMLE
Sbjct: 125 DVESILYKLLVEAEFNVLAAQQGIIYIDEVDKITKKAESKNISRDVSGEGVQQALLKMLE 184

Query: 4   G 2
           G
Sbjct: 185 G 185


>tr|O48566|O48566_ARATH CLP protease regulatory subunit CLPX
           OS=Arabidopsis thaliana GN=CLPX PE=2 SV=1
          Length = 579

 Score =  259 bits (663), Expect = 5e-68
 Identities = 141/179 (78%), Positives = 152/179 (84%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           D PTPKEI   L+KFVIGQ+RAKKVLSVAVYNHYKRIY+ES  K      R  G   +  
Sbjct: 157 DFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQK------RSAGETDSTA 210

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDV 179
            +  +D D VELEKSN+LLMGPTGSGKTLLAKTLA+FVNVPFVIADATTLTQAGYVGEDV
Sbjct: 211 AKPADD-DMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 269

Query: 178 ESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           ESILYKLLTVA++NV  AQQGIVYIDEVDKITKKAES+ ISRDVSGEGVQQALLKMLEG
Sbjct: 270 ESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLYISRDVSGEGVQQALLKMLEG 328


>tr|Q66GN9|Q66GN9_ARATH At1g33360 OS=Arabidopsis thaliana
           GN=At1g33360 PE=2 SV=1
          Length = 656

 Score =  259 bits (661), Expect = 8e-68
 Identities = 139/179 (77%), Positives = 150/179 (83%)
 Frame = -3

Query: 538 DLPTPKEIRTALDKFVIGQDRAKKVLSVAVYNHYKRIYYESLSKGNFKAERGVGLGSNLF 359
           D PTPKEI   LDKFVIGQ RAKKVLSVAVYNHYKRIY+ S+ KG+              
Sbjct: 248 DFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAA------------ 295

Query: 358 DEEDEDGDYVELEKSNVLLMGPTGSGKTLLAKTLAKFVNVPFVIADATTLTQAGYVGEDV 179
            +  +D D VEL+KSNVLLMGPTGSGKTLLAKTLA+ VNVPFVIADATTLTQAGYVG+DV
Sbjct: 296 -QPIDDDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDV 354

Query: 178 ESILYKLLTVAEFNVPTAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLEG 2
           ESIL+KLLTVAEFNV  AQQGIVYIDEVDKITKKAES+NISRDVSGEGVQQALLK+LEG
Sbjct: 355 ESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEG 413