BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921406|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_E02.
         (542 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12227|RPOC2_PEA DNA-directed RNA polymerase subunit beta'' (...    32   2.0  
sp|Q3MNT0|SPT6_CANAL Transcription elongation factor SPT6 OS=Can...    30   5.8  

>sp|P12227|RPOC2_PEA DNA-directed RNA polymerase subunit beta''
           (Fragment) OS=Pisum sativum GN=rpoC2 PE=3 SV=1
          Length = 1163

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +1

Query: 133 HETAKVQQQDAATR--LRLVLKRAQDCTSWLLLSSNSPLQ 246
           H   K+QQ  +     +R++L R ++C SW++LSS++  Q
Sbjct: 703 HSKGKIQQSLSQNHGTIRMLLNRNKECRSWIILSSSNCFQ 742


>sp|Q3MNT0|SPT6_CANAL Transcription elongation factor SPT6
           OS=Candida albicans GN=SPT6 PE=3 SV=1
          Length = 1401

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 314 GYTIDHYNVHRPILQFCLYHSTSCKGEFEDSSSQLVQ 204
           GY  +   +H  +  F   +  S K EF+D SSQLV+
Sbjct: 772 GYNANTKRLHDVVYNFVSEYGISVKSEFDDGSSQLVK 808

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921406|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_E02.
         (542 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******