BP921533
Clone id YMU001_000151_B05
Library
Length 468
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000151_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTATGGAGTCTGAAGAATTGGTCCTCATCTGCGCAATTGGCTATGCAAAGTACATGTATG
CTGAAGTCTAAAGGAAGCATACTAGGAAAAGATGGACGATCAGCTGAAGCAAAATGACGG
AAAGATATGTAGAACATGGTGGCGTGAAAGCTGAGCAACGAAAAGGAGAATGACGGGGTT
GAACCTGCAATTGTTACGGAACCTCCATAGGCAAACTTCGCCACACACTTCAAATGCCAA
AAGATAACTCGGATACAGCTAACCAGTCTCTGTAGCAACAATGCCAGTTGCCCAGATCAC
TGGAGGTTAAAAAGGGAAAAGAACACCTTTGCAATAATTATGCTGTCAAAGGAAGCTACA
CAAATAGGTTAATACAGGTTGAAAAAGAGTCAACGAGGGACCAAGCAAAAAATGAAGATG
AGACAGGCCATCATCTCTATTGTTGCCTTGACTCTTGCTGACTCAGCG
■■Homology search results ■■ -
sp_hit_id Q9D2Y6
Definition sp|Q9D2Y6|FBX25_MOUSE F-box only protein 25 OS=Mus musculus
Align length 47
Score (bit) 30.0
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921533|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_B05.
(468 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9D2Y6|FBX25_MOUSE F-box only protein 25 OS=Mus musculus GN=F... 30 5.2
sp|Q07764|HVA22_HORVU Protein HVA22 OS=Hordeum vulgare GN=HVA22 ... 30 5.3
sp|Q58077|Y663_METJA Uncharacterized protein MJ0663 OS=Methanoca... 29 8.9
sp|P57077|TAK1L_HUMAN TAK1-like protein OS=Homo sapiens GN=TAK1L... 29 8.9
sp|Q12913|PTPRJ_HUMAN Receptor-type tyrosine-protein phosphatase... 29 9.1

>sp|Q9D2Y6|FBX25_MOUSE F-box only protein 25 OS=Mus musculus
GN=Fbxo25 PE=2 SV=1
Length = 357

Score = 30.0 bits (66), Expect = 5.2
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3

Query: 309 KKGKEHLCNNYAVKGSYTNRLIQVEKESTRDQAKNEDETGHHLYCCL 449
K+ KEH N+ A Y + I V KEST+++ H YC L
Sbjct: 65 KRKKEHFGNDTAAHSFYREKWIYVHKESTKER---------HGYCTL 102


>sp|Q07764|HVA22_HORVU Protein HVA22 OS=Hordeum vulgare GN=HVA22
PE=2 SV=1
Length = 130

Score = 30.0 bits (66), Expect = 5.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1

Query: 426 LSHLHFLLGPSLTLFQPVLTYLCS 355
L+HLH + GPS+TL P+ +C+
Sbjct: 8 LTHLHSVAGPSITLLYPLYASVCA 31


>sp|Q58077|Y663_METJA Uncharacterized protein MJ0663
OS=Methanocaldococcus jannaschii GN=MJ0663 PE=3 SV=1
Length = 494

Score = 29.3 bits (64), Expect = 8.9
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3

Query: 195 YGTSIGKLRHTLQMPKDNSDTANQSL*QQCQLPRSLEVKKGK--EHLCNNYAVKGSYTNR 368
Y T + +R L +N +S+ + + +L+VK N + G Y+N+
Sbjct: 269 YNTYVESVREKLLSKTENIQLKPKSIKELKEFFENLDVKNSSWIYKNSNKFQPSGDYSNK 328

Query: 369 LIQVEKESTRDQAKNEDETGHHLYCCL 449
+ ++ K D D H ++ CL
Sbjct: 329 IYEIIKNIPEDAIIVTDAGKHTVFTCL 355


>sp|P57077|TAK1L_HUMAN TAK1-like protein OS=Homo sapiens GN=TAK1L
PE=1 SV=1
Length = 242

Score = 29.3 bits (64), Expect = 8.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2

Query: 128 ISFRHFASADRPSFPSMLPLDFSIHVLCIA 39
+ H AS+ P+F + LD+SI VLC A
Sbjct: 54 VGLEHLASSSPPAFGFLKCLDYSISVLCSA 83


>sp|Q12913|PTPRJ_HUMAN Receptor-type tyrosine-protein phosphatase eta
OS=Homo sapiens GN=PTPRJ PE=1 SV=3
Length = 1337

Score = 29.3 bits (64), Expect = 9.1
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1

Query: 295 DHWRLKREKNTFAIIMLSK 351
D WR+ EKN +AIIML+K
Sbjct: 1122 DFWRMVWEKNVYAIIMLTK 1140


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921533|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_B05.
(468 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******