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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943502
Clone id YMU02A01NGRL0003_A15
Library
Length 511
Definition Adiantum capillus-veneris mRNA for unknowm protein.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GTTTTTTCTAATGGATGGCTGAGCGCAAGGAGCGAAAGCTGACTGAACTGGAGAGCCAAC
AGGCCATAACAAAGATGAAAAGAGAACTCATAGCTGACAATCGGAAAAAGGGGCTGACCG
AGTCTTGGTAGCTCCATCAACAGACTATAATCCAGATTGTTGCGTGTTGTTATGTACAAA
AATGGAAGATTTCAAAGGATTTCGAAATAACTATAACACTTTGACCTTCAGCAAATTTAG
AGAAACCTCAGTTAGTCTTGCAATAGTTTTCATCATATGGTGGGGTTACTACCTGTACTG
TTACTTGTATCCAGTTCTATCGAAGGTGTTTGATATATATCCTTCTGAAGGAGGCTTTGT
GCAAAAGCATCACCGCACGAAAATACAAACTGCGTCGCACATTAGCTTTGTGCATGCAGA
GCTCGCTTGCTGCAAGCTCATGCACAGAGGTGTTTCCTTTGACGAGACCATATTTTTGTT
TTGTTCCAGTAAGCACGCACGTGTGGAGCCA
■■Homology search results ■■ -
sp_hit_id Q04585
Definition sp|Q04585|YDR09_YEAST Uncharacterized sugar kinase YDR109C OS=Saccharomyces cerevisiae
Align length 48
Score (bit) 30.0
E-value 6.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943502|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A15, 5'
         (511 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q04585|YDR09_YEAST Uncharacterized sugar kinase YDR109C OS=Sa...    30   6.5  
sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyosteli...    30   8.5  

>sp|Q04585|YDR09_YEAST Uncharacterized sugar kinase YDR109C
           OS=Saccharomyces cerevisiae GN=YDR109C PE=1 SV=1
          Length = 715

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -2

Query: 510 GSTRACLLEQNKNMVSSKETPLCMS--LQQASSACTKLMCDAVCIFVR 373
           GS RAC+++Q+ NM+S  E P+     +    +  ++ + +AVC  VR
Sbjct: 48  GSARACVIDQSGNMLSLAEKPIKREQLISNFITQSSREIWNAVCYCVR 95


>sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyostelium
           discoideum GN=mhkB PE=2 SV=1
          Length = 732

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +2

Query: 194 KGFRNNYNTLTFSKFRETSVSLAIVFIIWWGYYLYCYLYPVLSKVFDIYPSEGGFVQKHH 373
           K + + YN+    K  E   S  + F+      L C   P +   +  Y +  GFV    
Sbjct: 194 KKWADKYNSFKPPKKIEFLQSCVLEFVDRTSSDLICGAEPYVEGQYRKYNNNSGFVSNDE 253

Query: 374 RTKIQTASHISFVHA 418
           R   Q+ SH ++ H+
Sbjct: 254 RNTPQSFSHFTYEHS 268
tr_hit_id B6PRW8
Definition tr|B6PRW8|B6PRW8_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 73
Score (bit) 35.0
E-value 2.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943502|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A15, 5'
         (511 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6PRW8|B6PRW8_BRAFL Putative uncharacterized protein OS=Branc...    35   2.1  
tr|Q82337|Q82337_9DELA Tax protein (Fragment) OS=Human T-lymphot...    33   8.1  
tr|A2BUT3|A2BUT3_PROM5 Selenide,water dikinase OS=Prochlorococcu...    33   8.1  
tr|Q7XS42|Q7XS42_ORYSJ OSJNBa0074L08.6 protein OS=Oryza sativa s...    33   8.1  
tr|Q0JBJ6|Q0JBJ6_ORYSJ Os04g0528600 protein OS=Oryza sativa subs...    33   8.1  
tr|Q01HN1|Q01HN1_ORYSA OSIGBa0115K01-H0319F09.21 protein OS=Oryz...    33   8.1  
tr|B8ASC4|B8ASC4_ORYSI Putative uncharacterized protein OS=Oryza...    33   8.1  

>tr|B6PRW8|B6PRW8_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_110226 PE=4 SV=1
          Length = 387

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
 Frame = +3

Query: 18  AERKERKLTEL-ESQQAITKMKRELIADNRKKGLTESW*LHQQTIIQIVACCYV-----Q 179
           AE +++ L E+ E    I  M+ +L+A+ RK+G T +W   Q    QI   C+      Q
Sbjct: 291 AELRQQWLVEVKEMADRIITMREQLVANLRKEGSTHNW---QHITDQIGMFCFTGLKQQQ 347

Query: 180 KWKISKDFEITIT 218
             K++KDF + +T
Sbjct: 348 VEKLTKDFSVFLT 360


>tr|Q82337|Q82337_9DELA Tax protein (Fragment) OS=Human
           T-lymphotropic virus 1 GN=tax PE=4 SV=1
          Length = 236

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
 Frame = +2

Query: 119 RVLVAPSTDYNPDCCVLLCTKMEDFKGFRNNYNTLTFSK------FRETSVSLAIVFIIW 280
           +VL  P+TD  P+        M  +  FRN Y   T  +      F +  +    ++ +W
Sbjct: 69  KVLTPPTTDTTPNIPPSFLQAMRKYSPFRNGYMEPTLGQHLPTLSFPDPGLRPQNLYTLW 128

Query: 281 WGYYLYCYLY--------PVLSKVFDIYPSEGG 355
            G  +  YLY        P+L  V   +PS+ G
Sbjct: 129 GGSVVCMYLYQLSPPITWPLLPHVIFCHPSQLG 161


>tr|A2BUT3|A2BUT3_PROM5 Selenide,water dikinase OS=Prochlorococcus
           marinus (strain MIT 9515) GN=P9515_03351 PE=4 SV=1
          Length = 722

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -2

Query: 207 FRNPLKSSIFVHNNTQQSGL*SVDGATKTRSAPFSDCQL*VLFS-SLLWPVGSPVQSAFA 31
           F    + ++ ++NN Q++ L SVDG     S P+ + ++ VL + S LW  G+ + S  A
Sbjct: 391 FATSPEDAVQIYNNNQETILQSVDGFPALISDPWLNAKITVLHACSDLWACGAKLSSVQA 450

Query: 30  PCAQPSIRKN 1
             + P + K+
Sbjct: 451 LISLPKVGKD 460


>tr|Q7XS42|Q7XS42_ORYSJ OSJNBa0074L08.6 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0074L08.6 PE=4 SV=2
          Length = 984

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
 Frame = +2

Query: 65  HNKDEKRTHS*QSEKGA--DRVLVAPSTDYN-----PDCCVLLCTKMEDFKGFRN 208
           +N+  +RTH  Q+ K    D V+ +P  +Y      PDCC +LCT+ ++    +N
Sbjct: 625 NNEGTRRTHCIQNVKKRRFDDVINSPDVEYFGHSTFPDCCKVLCTQTDNLYNAKN 679


>tr|Q0JBJ6|Q0JBJ6_ORYSJ Os04g0528600 protein OS=Oryza sativa subsp.
            japonica GN=Os04g0528600 PE=4 SV=1
          Length = 1645

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
 Frame = +2

Query: 65   HNKDEKRTHS*QSEKGA--DRVLVAPSTDYN-----PDCCVLLCTKMEDFKGFRN 208
            +N+  +RTH  Q+ K    D V+ +P  +Y      PDCC +LCT+ ++    +N
Sbjct: 1286 NNEGTRRTHCIQNVKKRRFDDVINSPDVEYFGHSTFPDCCKVLCTQTDNLYNAKN 1340


>tr|Q01HN1|Q01HN1_ORYSA OSIGBa0115K01-H0319F09.21 protein OS=Oryza
           sativa GN=OSIGBa0115K01-H0319F09.21 PE=4 SV=1
          Length = 950

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
 Frame = +2

Query: 65  HNKDEKRTHS*QSEKGA--DRVLVAPSTDYN-----PDCCVLLCTKMEDFKGFRN 208
           +N+  +RTH  Q+ K    D V+ +P  +Y      PDCC +LCT+ ++    +N
Sbjct: 591 NNEGTRRTHCIQNVKKRRFDDVINSPDVEYFGHSTFPDCCKVLCTQTDNLYNAKN 645


>tr|B8ASC4|B8ASC4_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_16730 PE=4 SV=1
          Length = 1448

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
 Frame = +2

Query: 65   HNKDEKRTHS*QSEKGA--DRVLVAPSTDYN-----PDCCVLLCTKMEDFKGFRN 208
            +N+  +RTH  Q+ K    D V+ +P  +Y      PDCC +LCT+ ++    +N
Sbjct: 1132 NNEGTRRTHCIQNVKKRRFDDVINSPDVEYFGHSTFPDCCKVLCTQTDNLYNAKN 1186