DK943505
Clone id YMU02A01NGRL0003_A18
Library
Length 209
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A18. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGGCTAACCAGAGTACAAGGTAC
CAATCCTTTGACTTTTGGATAGTCCAAGAAGTGGGCTGCTGACATTTTTGCGATGCAATC
AGGCTTGCAAGCAATGTATACTGTGTCTGAGATGTAAATGGACTGATAAATTCAATATAT
TCTTTCTGCGACGGTCAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q8CIY2
Definition sp|Q8CIY2|DUOX1_RAT Dual oxidase 1 OS=Rattus norvegicus
Align length 32
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943505|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A18, 5'
(157 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8CIY2|DUOX1_RAT Dual oxidase 1 OS=Rattus norvegicus GN=Duox1... 30 3.8

>sp|Q8CIY2|DUOX1_RAT Dual oxidase 1 OS=Rattus norvegicus GN=Duox1
PE=1 SV=1
Length = 1551

Score = 30.0 bits (66), Expect = 3.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3

Query: 113 SQTQYTLLASLIASQKCQQPTSWTIQKSKDWY 18
S + LL ++AS Q P SW +Q+ WY
Sbjct: 5 SAVAWILLFGVLASLGAQNPVSWEVQRFDGWY 36


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943505|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A18, 5'
(157 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******