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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943506
Clone id YMU02A01NGRL0003_A19
Library
Length 231
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A19. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence 
AGGCGACTTCTTCAGCTCTAGTAGTAATTGATCCTCAAGCTAACAAATTGTAATTGATTG
CAAGTGGTTGTATGCTTAATGTTACGCCATTGCTGTGCTACTAGTGATAAATGCTACTAG
TGATAAAAGGCCGTTCGCTGTGCTTGTTATCACCCACTCACTCTTAACTCATGGAGAAAT
GCAATGAAATTGTTTCCTGTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9PUH5
Definition sp|Q9PUH5|PA29_AUSSU Phospholipase A2 isozyme S11-61 OS=Austrelaps superbus
Align length 32
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943506|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A19, 5'
         (202 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9PUH5|PA29_AUSSU Phospholipase A2 isozyme S11-61 OS=Austrela...    31   1.7  
sp|Q9PUH6|PA28_AUSSU Phospholipase A2 isozyme S10-58F OS=Austrel...    31   1.7  
sp|Q9PUH7|PA27_AUSSU Phospholipase A2 isozyme S15-109 OS=Austrel...    31   1.7  
sp|P20250|PA2G_PSEAU Phospholipase A2 isozyme PA-1G OS=Pseudechi...    31   2.2  
sp|P20256|PA2C_PSEAU Phospholipase A2 isozyme PA-12C OS=Pseudech...    30   3.8  
sp|P20258|PA2A_PSEPO Phospholipase A2 OS=Pseudechis porphyriacus...    30   3.8  
sp|P20253|PA29_PSEAU Phospholipase A2 isozyme PA-9C OS=Pseudechi...    30   3.8  
sp|P20251|PA23_PSEAU Phospholipase A2 isozyme PA-3 OS=Pseudechis...    29   8.4  
sp|P08873|PA20_NOTSC Phospholipase A2 OS=Notechis scutatus scuta...    29   8.4  

>sp|Q9PUH5|PA29_AUSSU Phospholipase A2 isozyme S11-61 OS=Austrelaps
           superbus PE=2 SV=1
          Length = 145

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +1

Query: 82  LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
           L  CC T D CY   +A +  CY  LTL SW+
Sbjct: 68  LDRCCKTHDDCY--TEAGKKGCYPKLTLYSWK 97


>sp|Q9PUH6|PA28_AUSSU Phospholipase A2 isozyme S10-58F OS=Austrelaps
           superbus PE=2 SV=1
          Length = 145

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +1

Query: 82  LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
           L  CC T D CY   +A +  CY  LTL SW+
Sbjct: 68  LDRCCKTHDDCY--TEAGKKGCYPKLTLYSWK 97


>sp|Q9PUH7|PA27_AUSSU Phospholipase A2 isozyme S15-109 OS=Austrelaps
           superbus PE=2 SV=1
          Length = 144

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +1

Query: 82  LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
           L  CC T D CY   +A +  CY  LTL SW+
Sbjct: 68  LDRCCKTHDDCY--TEAGKKGCYPKLTLYSWK 97


>sp|P20250|PA2G_PSEAU Phospholipase A2 isozyme PA-1G OS=Pseudechis
           australis PE=1 SV=1
          Length = 117

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +1

Query: 82  LRHCCATSDKCY***KAVRCACYHPLTLNSW 174
           L  CC T D CY   +A +  CY  LTL SW
Sbjct: 41  LDRCCQTHDDCY--GEAEKKGCYPKLTLYSW 69


>sp|P20256|PA2C_PSEAU Phospholipase A2 isozyme PA-12C OS=Pseudechis
           australis PE=1 SV=1
          Length = 118

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 82  LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
           L  CC T D CY   +A +  C+  LTL SW+
Sbjct: 41  LDRCCQTHDNCY--EQAGKKGCFPKLTLYSWK 70


>sp|P20258|PA2A_PSEPO Phospholipase A2 OS=Pseudechis porphyriacus
           PE=1 SV=1
          Length = 117

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 82  LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
           L  CC T D CY   +A +  C+  LTL SW+
Sbjct: 41  LDRCCQTHDNCY--DQAGKKGCFPKLTLYSWK 70


>sp|P20253|PA29_PSEAU Phospholipase A2 isozyme PA-9C OS=Pseudechis
           australis PE=1 SV=1
          Length = 118

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 82  LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
           L  CC   D+CY   +AV+  C+  LT+ SW+
Sbjct: 41  LDRCCKVHDECYG--EAVKQGCFPKLTVYSWK 70


>sp|P20251|PA23_PSEAU Phospholipase A2 isozyme PA-3 OS=Pseudechis
           australis PE=1 SV=1
          Length = 118

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 82  LRHCCATSDKCY***KAVRCACYHPLTLNSW 174
           L  CC   D CY   +A +  CY  LTL SW
Sbjct: 41  LDRCCKVHDDCYG--EAEKKGCYPKLTLYSW 69


>sp|P08873|PA20_NOTSC Phospholipase A2 OS=Notechis scutatus scutatus
           PE=1 SV=1
          Length = 145

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 82  LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
           L  CC   D CY   +A +  CY  LTL SW+
Sbjct: 68  LDRCCKAHDDCYG--EAGKKGCYPTLTLYSWQ 97
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943506|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A19, 5'
         (202 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******