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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943515
Clone id YMU02A01NGRL0003_B07
Library
Length 488
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_B07. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
TGGCTTGCAAAGCTGAGATTAGACAAGGATGTTGAACAGATGTCTGTAGAGGTGGAAAGG
CGGTTAGAACGAAAAGCGTACGCGGCCAAGAAGTGGAGCAAGAATGCATATGTACCTGCT
TCATACTGCCTATGAGGAACACTTAGGGAAGCAAGGTAAATAGTTGAATGTGTGTGCGCC
TGGTGTTGAAAAGTGTTTCCTGCTTCAATGCAAAAGAGACGTCCACAAAAATTCTTCTGA
GCAGCAGGAAGCACGGGCCTTCTATGATTGACTTGGCGAGTGCTGTGCATGCTCGACCAG
TTTGTAACAATCTATCAAGAAGAGGTGTTGAGGGAGAGAAAAGGATTTGGGAATTGGGGG
GGTGTGCATCTTCTACAGAAAGCAATGCTCTCTGTTTTGCGGTTGTTGAAGTCCCTATGT
TGAGTCCATGCTGCTAGCATCAGCAACAGCTTGCGAAAGTCAATGTTCTAATTCCTTGGT
GTTTGGGC
■■Homology search results ■■ -
sp_hit_id Q5B0Y5
Definition sp|Q5B0Y5|SET1_EMENI Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Emericella nidulans
Align length 69
Score (bit) 33.5
E-value 0.49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943515|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B07, 5'
         (473 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5B0Y5|SET1_EMENI Histone-lysine N-methyltransferase, H3 lysi...    33   0.49 
sp|Q9ZML2|ISCS_HELPJ Cysteine desulfurase OS=Helicobacter pylori...    31   3.2  
sp|O25008|ISCS_HELPY Cysteine desulfurase OS=Helicobacter pylori...    30   5.4  

>sp|Q5B0Y5|SET1_EMENI Histone-lysine N-methyltransferase, H3
           lysine-4 specific OS=Emericella nidulans GN=set1 PE=3
           SV=1
          Length = 1220

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -3

Query: 441 SQAVADASSMDST*GLQQPQ-NREHCFL*KMHTPPIPKSFSLPQHLFLIDCYKLVEHAQH 265
           S + A A + D   G +Q + N  +  +  +HTPP P + SL Q + ++   KLV     
Sbjct: 130 SPSQAKAPNGDEPDGFRQARANVSNSTMTPLHTPPTPTTHSLSQRVAIVKGSKLVHDPDR 189

Query: 264 SPSQS*KAR 238
           +PS+  + R
Sbjct: 190 APSKDKRKR 198


>sp|Q9ZML2|ISCS_HELPJ Cysteine desulfurase OS=Helicobacter pylori
           J99 GN=iscS PE=3 SV=1
          Length = 387

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 243 PSMIDLASAVHARPVCNNLSRRGVEGEKRIWELGGCASSTESNALC 380
           P ++ +   VH  P    +S RG+EGE  +W+L     +  + + C
Sbjct: 283 PDVMVVGDRVHRVPNTTLISVRGIEGEAMLWDLNRSNIAASTGSAC 328


>sp|O25008|ISCS_HELPY Cysteine desulfurase OS=Helicobacter pylori
           GN=iscS PE=3 SV=1
          Length = 387

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +3

Query: 243 PSMIDLASAVHARPVCNNLSRRGVEGEKRIWELGGCASSTESNALC 380
           P ++ +   +H  P    +S RG+EGE  +W+L     +  + + C
Sbjct: 283 PDVMVVGDRIHRVPNTTLVSVRGIEGEAMLWDLNRSNIAASTGSAC 328
tr_hit_id Q4FVX1
Definition tr|Q4FVX1|Q4FVX1_LEIMA Putative uncharacterized protein OS=Leishmania major strain Friedlin
Align length 49
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943515|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B07, 5'
         (473 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4FVX1|Q4FVX1_LEIMA Putative uncharacterized protein OS=Leish...    35   1.9  
tr|Q8A4J5|Q8A4J5_BACTN Conserved protein found in conjugate tran...    35   2.4  
tr|B0ULW0|B0ULW0_METS4 Phosphate butyryltransferase OS=Methyloba...    35   2.4  
tr|B8IB58|B8IB58_METNO MaoC domain protein dehydratase OS=Methyl...    33   7.1  
tr|B8GD81|B8GD81_9CHLR Transcriptional regulator, LacI family OS...    33   7.1  
tr|B0U993|B0U993_METS4 Putative uncharacterized protein OS=Methy...    33   9.3  
tr|A9WEH6|A9WEH6_CHLAA Alanine racemase OS=Chloroflexus aurantia...    33   9.3  
tr|B2QGQ9|B2QGQ9_9CHLR Transcriptional regulator, LacI family OS...    33   9.3  

>tr|Q4FVX1|Q4FVX1_LEIMA Putative uncharacterized protein
           OS=Leishmania major strain Friedlin GN=LMJ_1430 PE=4
           SV=1
          Length = 896

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = -2

Query: 409 LNIGTSTTAKQRALLSVEDAHPPNSQILFSPSTPLLDRLLQTGRACTAL 263
           L I  STTA++R LL +   HPP++    SP+    D   +   AC AL
Sbjct: 682 LGIAVSTTARERLLLGLSPTHPPSAVPPHSPACVGEDAYQECVTACAAL 730


>tr|Q8A4J5|Q8A4J5_BACTN Conserved protein found in conjugate
           transposon OS=Bacteroides thetaiotaomicron GN=BT_2604
           PE=4 SV=1
          Length = 235

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 272 HSTRQVNHRRPVLPAAQKNFCGRLFCIEAGNTFQHQAHTHSTIYLAS 132
           H  R  N +     +A + FCGRLFC  AG  +  ++H H+ +   S
Sbjct: 23  HLKRFYNEKENPFFSAFRVFCGRLFCAGAGACWHQRSHEHADLVFRS 69


>tr|B0ULW0|B0ULW0_METS4 Phosphate butyryltransferase
           OS=Methylobacterium sp. (strain 4-46) GN=M446_6099 PE=4
           SV=1
          Length = 482

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 109 MKQVHMHSCSTSWPRTLFVLTAFPPLQTSVQHPC 8
           + +VH+H     W R +      PP++T+V HPC
Sbjct: 154 LPEVHLHERGAQWRRLIDAARGRPPIRTAVVHPC 187


>tr|B8IB58|B8IB58_METNO MaoC domain protein dehydratase
           OS=Methylobacterium nodulans ORS 2060 GN=Mnod_0409 PE=4
           SV=1
          Length = 480

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 109 MKQVHMHSCSTSWPRTLFVLTAFPPLQTSVQHPC 8
           + +VH+H     W R +       P++T+V HPC
Sbjct: 154 LPEVHLHERGAQWRRLIAAAQGLAPIRTAVVHPC 187


>tr|B8GD81|B8GD81_9CHLR Transcriptional regulator, LacI family
           OS=Chloroflexus aggregans DSM 9485 GN=Cagg_2268 PE=4
           SV=1
          Length = 339

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = -2

Query: 418 QHGLNIGTSTTAKQRALLSVEDAHPPNSQILFSPSTPLLDRLLQTGRACTALAKSIIEG 242
           + GL IGT       A++  +DA  P  Q LF P + +   + + GR C  L  +I+EG
Sbjct: 268 ERGLTIGTDL-----AIIGFDDA--PMVQYLFPPLSSVRQPIAEAGRKCIELLVAIVEG 319


>tr|B0U993|B0U993_METS4 Putative uncharacterized protein
           OS=Methylobacterium sp. (strain 4-46) GN=M446_0810 PE=4
           SV=1
          Length = 930

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 198 KETSTKILLSSRKHGPSMIDLASAVHARPVCNNLSRRGVEGEKRIW 335
           +E+  K+      HG +  +    V ARPV N +  R   GE+R+W
Sbjct: 818 RESIAKVRQFFEAHGDTRFEQIGDVEARPVTNRVGWRKGHGEERVW 863


>tr|A9WEH6|A9WEH6_CHLAA Alanine racemase OS=Chloroflexus aurantiacus
           (strain ATCC 29366 / DSM 635 / J-10-fl) GN=Caur_2023
           PE=4 SV=1
          Length = 341

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -2

Query: 412 GLNIGTSTTAKQRALLSVEDAHPPNSQILFSPSTPLLDRLLQTGRACTALAKSIIEG 242
           GL IGT       A++  +DA  P  Q LF P T +   + + G  C  L  S++EG
Sbjct: 272 GLEIGTDL-----AIIGFDDA--PMVQYLFPPLTSVRQPIAEAGHKCVELLVSLVEG 321


>tr|B2QGQ9|B2QGQ9_9CHLR Transcriptional regulator, LacI family
           OS=Chloroflexus sp. Y-400-fl GN=Chy400DRAFT_0152 PE=4
           SV=1
          Length = 341

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -2

Query: 412 GLNIGTSTTAKQRALLSVEDAHPPNSQILFSPSTPLLDRLLQTGRACTALAKSIIEG 242
           GL IGT       A++  +DA  P  Q LF P T +   + + G  C  L  S++EG
Sbjct: 272 GLEIGTDL-----AIIGFDDA--PMVQYLFPPLTSVRQPIAEAGHKCVELLVSLVEG 321