DK943516
Clone id YMU02A01NGRL0003_B08
Library
Length 343
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_B08. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID -
Sequence
GGCTTCGTTTTACTAGGCAAAGCAATTGAATGCTGCTACTTTAACCACAGTTGCGTTTCT
TGCCACAGCTTTTGCCTCTCTCCTTGTTGGAGTGTTTTTGAGCTACTAATTCTTTCTCTC
ATGTGAGCACATTGAGAGAGACTGGCAACTTTTGTATTTGACCTACCCCACTTATAAAGA
TTTAAAAGACACACAGTAGGAACTCACTCTCCAATTTCCTACCTCTACTTAGAGATTTCA
TTATATCAATCTGTTTCTGAAGTTTGACATATATACTGGTGCTTTTTGTTACTAATATAG
ATCGACTAGACTTCTTTCAGGACTACCTAGTGGGGTTGTTTGA
■■Homology search results ■■ -
sp_hit_id Q32RZ3
Definition sp|Q32RZ3|MATK_STAPU Maturase K OS=Staurastrum punctulatum
Align length 30
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943516|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B08, 5'
(343 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q32RZ3|MATK_STAPU Maturase K OS=Staurastrum punctulatum GN=ma... 29 6.4

>sp|Q32RZ3|MATK_STAPU Maturase K OS=Staurastrum punctulatum GN=matK
PE=3 SV=1
Length = 565

Score = 29.3 bits (64), Expect = 6.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3

Query: 192 HSRNSLSNFLPLLRDFIISICF*SLTYILV 281
H + NFLPL + I S+ F S+T+IL+
Sbjct: 98 HDQKKKENFLPLPKKVIFSLFFESITFILL 127


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943516|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B08, 5'
(343 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******