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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943539
Clone id YMU02A01NGRL0003_C12
Library
Length 606
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_C12. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGGGCAGTGCACACCTTCATCA
TCGCCAATTACATCGGCCCGCATCTTCCGCCGCGCCCCCGCCCCCGCCCTCACCCTCACC
CTCACCCTCACCCTCCTCGCTTGGAATTCGCCGCCGCTCATGTGTGGTTTCTGCTTTCAA
CATCCGCCTGGCAGCCTCGGATTCTGACTGCTGAGGTGGCGTGCATCGAAGTGCTGGCCA
GTTCAATTCTGCTGCAGAAGGTGCAGTGGATGCACGGCTGAGATTGCCAGCCCCATGAGC
CACGACCTTGACGGACACTTAAAACCCGATGAAGAGCACCACTCCTCGCATTTATGTCCT
TGAGAGAACCATTCAGCACAATATGATGCCAAACAGCCCCTGCCTCAACATCTCATCAGT
AACTTTCTTTCTGCTTGAGTCATACAACAGATTTAAAGGGGTGGAAAAAGTTGTGGCAAG
TGTAGAGGGAAAGGTGCAGTGGAGTGCCCAGGGTGCAAGGGCAGTGGCAGGAACAAGAAA
AATGGAAACCTGTTTGAAAGATGGAAGTGTTTTGATTGTCAGGGATTTGGCCTTGTGAGC
TGTCCC
■■Homology search results ■■ -
sp_hit_id Q9W4S1
Definition sp|Q9W4S1|GRCR2_DROME Glutaredoxin domain-containing cysteine-rich protein CG12206 OS=Drosophila melanogaster
Align length 37
Score (bit) 32.3
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943539|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_C12, 5'
         (566 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9W4S1|GRCR2_DROME Glutaredoxin domain-containing cysteine-ri...    32   1.7  
sp|Q58529|Y1129_METJA Uncharacterized protein MJ1129 OS=Methanoc...    32   2.9  
sp|P05630|ATPD_BOVIN ATP synthase subunit delta, mitochondrial O...    31   3.7  
sp|Q5NU14|MKRN1_FUGRU Makorin-1 OS=Fugu rubripes GN=mkrn1 PE=2 SV=1    30   8.3  

>sp|Q9W4S1|GRCR2_DROME Glutaredoxin domain-containing cysteine-rich
           protein CG12206 OS=Drosophila melanogaster GN=CG12206
           PE=2 SV=2
          Length = 582

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +3

Query: 465 CPGCKGSGRNKKNGNL---FERWKCFDCQGFGLVSCP 566
           CP C GS ++    +    F   KC +C   GL+ CP
Sbjct: 544 CPACNGSKKSMHRNHFTAEFVALKCMNCDEVGLIKCP 580


>sp|Q58529|Y1129_METJA Uncharacterized protein MJ1129
           OS=Methanocaldococcus jannaschii GN=MJ1129 PE=4 SV=1
          Length = 95

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +1

Query: 322 ERTIQHNMMPNSP-CLNISSVTFFLLESYNRFKGVEKVVASVEGKV 456
           E  ++  ++P +P C+++ ++ F   E+    +GV+KV  +VEG V
Sbjct: 37  EGNVKFKLIPTNPYCMSVMAMAFQAKEAVKSLEGVKKVEVTVEGHV 82


>sp|P05630|ATPD_BOVIN ATP synthase subunit delta, mitochondrial
           OS=Bos taurus GN=ATP5D PE=1 SV=2
          Length = 168

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 17/58 (29%), Positives = 31/58 (53%)
 Frame = -1

Query: 515 KQVSIFLVPATALAPWALHCTFPSTLATTFSTPLNLLYDSSRKKVTDEMLRQGLFGII 342
           +QV ++   A A AP A     P  ++ TF++P  + ++S+  +  D   + G FGI+
Sbjct: 17  RQVRLYAEAAAAQAPAA----GPGQMSFTFASPTQVFFNSANVRQVDVPTQTGAFGIL 70


>sp|Q5NU14|MKRN1_FUGRU Makorin-1 OS=Fugu rubripes GN=mkrn1 PE=2 SV=1
          Length = 429

 Score = 30.0 bits (66), Expect = 8.3
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 183 ASKCWPVQFCCRRCSGCTAEIASPMSHDLDGHLKPDEEHHSSHLCP 320
           A++  P Q  C R      EI+ P+  +L+G    D+E     LCP
Sbjct: 115 AAEFVPGQPYCGRAESVDVEISIPLIEELNGDATTDKEELRKQLCP 160
tr_hit_id B8AWW2
Definition tr|B8AWW2|B8AWW2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 37
Score (bit) 85.5
E-value 2.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943539|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_C12, 5'
         (566 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8AWW2|B8AWW2_ORYSI Putative uncharacterized protein OS=Oryza...    86   2e-15
tr|A3AZ43|A3AZ43_ORYSJ Putative uncharacterized protein OS=Oryza...    86   2e-15
tr|B6U3Z1|B6U3Z1_MAIZE Putative uncharacterized protein OS=Zea m...    84   4e-15
tr|Q9SKA5|Q9SKA5_ARATH F12K8.2 protein (At1g22630/F12K8_2) OS=Ar...    83   9e-15
tr|A9NX85|A9NX85_PICSI Putative uncharacterized protein OS=Picea...    81   5e-14
tr|A9T6P3|A9T6P3_PHYPA Predicted protein OS=Physcomitrella paten...    80   6e-14
tr|A9PJC7|A9PJC7_POPJC Putative uncharacterized protein OS=Popul...    77   9e-13
tr|Q0DLE6|Q0DLE6_ORYSJ Os05g0105800 protein (Fragment) OS=Oryza ...    67   9e-10
tr|A6G318|A6G318_9DELT Chaperone protein DnaJ OS=Plesiocystis pa...    37   0.58 
tr|B4C628|B4C628_9CHRO Integrase family protein OS=Cyanothece sp...    35   2.9  
tr|O30481|O30481_STRHY PKS module 3 OS=Streptomyces hygroscopicu...    35   3.7  
tr|Q1RFW1|Q1RFW1_ECOUT Putative uncharacterized protein OS=Esche...    34   4.9  
tr|Q0TLA7|Q0TLA7_ECOL5 Putative uncharacterized protein OS=Esche...    34   4.9  
tr|A1A7S2|A1A7S2_ECOK1 Putative uncharacterized protein aec18 OS...    34   4.9  
tr|Q6TKV0|Q6TKV0_ECOLX Putative uncharacterized protein OS=Esche...    34   4.9  
tr|B7N892|B7N892_ECOLX Putative uncharacterized protein OS=Esche...    34   4.9  
tr|B7MQ41|B7MQ41_ECOLX Putative uncharacterized protein OS=Esche...    34   4.9  
tr|B3HQB0|B3HQB0_ECOLX Type VI secretion protein, EvpB/family OS...    34   4.9  

>tr|B8AWW2|B8AWW2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_18119 PE=4 SV=1
          Length = 105

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 34/37 (91%), Positives = 36/37 (97%)
 Frame = +3

Query: 456 AVECPGCKGSGRNKKNGNLFERWKCFDCQGFGLVSCP 566
           AVECPGCKG+GRNKKNGN+FERWKCFDCQGFGL SCP
Sbjct: 54  AVECPGCKGTGRNKKNGNIFERWKCFDCQGFGLKSCP 90


>tr|A3AZ43|A3AZ43_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_016065 PE=4 SV=1
          Length = 434

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 34/37 (91%), Positives = 36/37 (97%)
 Frame = +3

Query: 456 AVECPGCKGSGRNKKNGNLFERWKCFDCQGFGLVSCP 566
           AVECPGCKG+GRNKKNGN+FERWKCFDCQGFGL SCP
Sbjct: 54  AVECPGCKGTGRNKKNGNIFERWKCFDCQGFGLKSCP 90


>tr|B6U3Z1|B6U3Z1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 119

 Score = 84.3 bits (207), Expect = 4e-15
 Identities = 33/37 (89%), Positives = 36/37 (97%)
 Frame = +3

Query: 456 AVECPGCKGSGRNKKNGNLFERWKCFDCQGFGLVSCP 566
           AVECPGCKG+G+NKKNGN+FERWKCFDCQGFGL SCP
Sbjct: 68  AVECPGCKGTGKNKKNGNIFERWKCFDCQGFGLKSCP 104


>tr|Q9SKA5|Q9SKA5_ARATH F12K8.2 protein (At1g22630/F12K8_2)
           OS=Arabidopsis thaliana GN=At1g22630 PE=4 SV=1
          Length = 110

 Score = 83.2 bits (204), Expect = 9e-15
 Identities = 31/37 (83%), Positives = 36/37 (97%)
 Frame = +3

Query: 456 AVECPGCKGSGRNKKNGNLFERWKCFDCQGFGLVSCP 566
           A+ECPGCKG+G+NKKNGN+FERWKCFDCQGFG+ SCP
Sbjct: 59  AIECPGCKGTGKNKKNGNMFERWKCFDCQGFGMKSCP 95


>tr|A9NX85|A9NX85_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 127

 Score = 80.9 bits (198), Expect = 5e-14
 Identities = 30/37 (81%), Positives = 36/37 (97%)
 Frame = +3

Query: 456 AVECPGCKGSGRNKKNGNLFERWKCFDCQGFGLVSCP 566
           A+EC GCKG+G+NKKNGN+FERWKC+DCQGFGL+SCP
Sbjct: 76  AIECQGCKGTGKNKKNGNMFERWKCYDCQGFGLLSCP 112


>tr|A9T6P3|A9T6P3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_168385 PE=4 SV=1
          Length = 121

 Score = 80.5 bits (197), Expect = 6e-14
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = +3

Query: 459 VECPGCKGSGRNKKNGNLFERWKCFDCQGFGLVSCP 566
           VEC GCKG+G+NKKNGN+FERWKCFDCQGFGLV CP
Sbjct: 71  VECQGCKGTGKNKKNGNMFERWKCFDCQGFGLVKCP 106


>tr|A9PJC7|A9PJC7_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=4 SV=1
          Length = 118

 Score = 76.6 bits (187), Expect = 9e-13
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 456 AVECPGCKGSGRNKKNGNLFERWKCFDCQGFGLVSCP 566
           A+EC GCKG+G+NKKNGN+FERWKCFDCQGF L SCP
Sbjct: 67  AMECSGCKGTGKNKKNGNIFERWKCFDCQGFVLKSCP 103


>tr|Q0DLE6|Q0DLE6_ORYSJ Os05g0105800 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os05g0105800 PE=4 SV=1
          Length = 44

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 480 GSGRNKKNGNLFERWKCFDCQGFGLVSCP 566
           G+GRNKKNGN+FERWKCFDCQGFGL SCP
Sbjct: 1   GTGRNKKNGNIFERWKCFDCQGFGLKSCP 29


>tr|A6G318|A6G318_9DELT Chaperone protein DnaJ OS=Plesiocystis
           pacifica SIR-1 GN=PPSIR1_16315 PE=3 SV=1
          Length = 371

 Score = 37.4 bits (85), Expect = 0.58
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 459 VECPGCKGSGRNKKNGNLFERWKCFDCQGFGLV 557
           +ECP C G+G  K  G L  R +C  C G G++
Sbjct: 157 IECPNCDGTGEVKTGGFLSRRSRCGRCDGLGMI 189


>tr|B4C628|B4C628_9CHRO Integrase family protein OS=Cyanothece sp.
           PCC 8802 GN=Cyan8802DRAFT_4568 PE=4 SV=1
          Length = 292

 Score = 35.0 bits (79), Expect = 2.9
 Identities = 23/55 (41%), Positives = 32/55 (58%)
 Frame = +1

Query: 391 LLESYNRFKGVEKVVASVEGKVQWSAQGARAVAGTRKMETCLKDGSVLIVRDLAL 555
           L+E+ +  K V+  + SV+GK +   +   A+     M  CLKD SVL VRDLAL
Sbjct: 107 LMEAADYAKAVD--LPSVKGKKRLRGRALTALEIEGLMSVCLKDSSVLGVRDLAL 159