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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943557
Clone id YMU02A01NGRL0003_D09
Library
Length 150
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_D09. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
CCTCTCTCAGAACGTCAAGCGGAGTAGAAGAGTTGCGTAGGAGCTCGGCCGCAGGATGGG
TGTCTCACGGGACTCCACGCACAAGAGGCGGGCAACTGGAGGCAAGAAGAAGACATGGCG
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O81361
Definition sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca
Align length 22
Score (bit) 45.8
E-value 7.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943557|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_D09, 5'
         (121 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca...    46   7e-05
sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa sub...    44   2e-04
sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays GN=RPS8...    44   2e-04
sp|Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis t...    44   3e-04
sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis t...    44   3e-04
sp|Q8MLY8|RS8_DROME 40S ribosomal protein S8 OS=Drosophila melan...    40   0.003
sp|O76756|RS8_APIME 40S ribosomal protein S8 OS=Apis mellifera G...    37   0.040
sp|Q7SYU0|RS8_XENLA 40S ribosomal protein S8 OS=Xenopus laevis G...    35   0.090
sp|P62243|RS8_RAT 40S ribosomal protein S8 OS=Rattus norvegicus ...    35   0.090
sp|P62242|RS8_MOUSE 40S ribosomal protein S8 OS=Mus musculus GN=...    35   0.090
sp|Q4R6P8|RS8_MACFA 40S ribosomal protein S8 OS=Macaca fascicula...    35   0.090
sp|P62241|RS8_HUMAN 40S ribosomal protein S8 OS=Homo sapiens GN=...    35   0.090
sp|Q5E958|RS8_BOVIN 40S ribosomal protein S8 OS=Bos taurus GN=RP...    35   0.090
sp|Q90YR6|RS8_ICTPU 40S ribosomal protein S8 OS=Ictalurus puncta...    35   0.12 
sp|P62247|RS8_DANRE 40S ribosomal protein S8 OS=Danio rerio GN=r...    35   0.12 
sp|Q8WQI5|RS8_SPOFR 40S ribosomal protein S8 OS=Spodoptera frugi...    34   0.20 
sp|Q9ZT56|RS8_GRIJA 40S ribosomal protein S8 OS=Griffithsia japo...    34   0.26 
sp|P05754|RS8_YEAST 40S ribosomal protein S8 OS=Saccharomyces ce...    33   0.34 
sp|Q4N3P0|RS8_THEPA 40S ribosomal protein S8 OS=Theileria parva ...    33   0.58 
sp|Q4UFS9|RS8_THEAN 40S ribosomal protein S8 OS=Theileria annula...    33   0.58 
sp|Q9P7B2|RS8B_SCHPO 40S ribosomal protein S8-B OS=Schizosacchar...    33   0.58 
sp|O14049|RS8A_SCHPO 40S ribosomal protein S8-A OS=Schizosacchar...    33   0.58 
sp|O32254|YVBT_BACSU Uncharacterized protein yvbT OS=Bacillus su...    29   6.4  
sp|Q54E24|RS8_DICDI 40S ribosomal protein S8 OS=Dictyostelium di...    29   8.4  

>sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca
           GN=RPS8 PE=2 SV=1
          Length = 221

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDS HKRRATGGKKK WR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWR 22


>sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa subsp.
           japonica GN=RPS8 PE=2 SV=2
          Length = 220

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDS HKRRATGGK+K WR
Sbjct: 1   MGISRDSMHKRRATGGKQKAWR 22


>sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays GN=RPS8
           PE=2 SV=2
          Length = 221

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDS HKRRATGGK+K WR
Sbjct: 1   MGISRDSMHKRRATGGKQKAWR 22


>sp|Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis
           thaliana GN=RPS8B PE=2 SV=1
          Length = 210

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDS HKRRATGGK+K WR
Sbjct: 1   MGISRDSIHKRRATGGKQKMWR 22


>sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis
           thaliana GN=RPS8A PE=2 SV=1
          Length = 222

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDS HKRRATGGK+K WR
Sbjct: 1   MGISRDSIHKRRATGGKQKQWR 22


>sp|Q8MLY8|RS8_DROME 40S ribosomal protein S8 OS=Drosophila
           melanogaster GN=RpS8 PE=1 SV=1
          Length = 208

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDS HKRRATGGK+K+ R
Sbjct: 1   MGISRDSAHKRRATGGKRKSLR 22


>sp|O76756|RS8_APIME 40S ribosomal protein S8 OS=Apis mellifera
           GN=RpS8 PE=2 SV=2
          Length = 208

 Score = 36.6 bits (83), Expect = 0.040
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRD  HKRRATGGK+K  R
Sbjct: 1   MGISRDHWHKRRATGGKRKPIR 22


>sp|Q7SYU0|RS8_XENLA 40S ribosomal protein S8 OS=Xenopus laevis
           GN=rps8 PE=2 SV=3
          Length = 208

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTW 118
           MG+SRD+ HKRR TGGK+K +
Sbjct: 1   MGISRDNWHKRRKTGGKRKPY 21


>sp|P62243|RS8_RAT 40S ribosomal protein S8 OS=Rattus norvegicus
           GN=Rps8 PE=1 SV=2
          Length = 208

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTW 118
           MG+SRD+ HKRR TGGK+K +
Sbjct: 1   MGISRDNWHKRRKTGGKRKPY 21


>sp|P62242|RS8_MOUSE 40S ribosomal protein S8 OS=Mus musculus
           GN=Rps8 PE=1 SV=2
          Length = 208

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTW 118
           MG+SRD+ HKRR TGGK+K +
Sbjct: 1   MGISRDNWHKRRKTGGKRKPY 21
tr_hit_id A9TQV8
Definition tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens
Align length 22
Score (bit) 48.5
E-value 0.0002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943557|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_D09, 5'
         (121 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...    49   2e-04
tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...    49   2e-04
tr|A9TG34|A9TG34_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...    49   2e-04
tr|A9T469|A9T469_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...    49   2e-04
tr|A9S3Y5|A9S3Y5_PHYPA Ribosomal protein S8 OS=Physcomitrella pa...    49   2e-04
tr|Q2XPV9|Q2XPV9_SOLTU Ribosomal protein S8 OS=Solanum tuberosum...    46   8e-04
tr|B7FMW0|B7FMW0_MEDTR Putative uncharacterized protein OS=Medic...    46   8e-04
tr|Q3HRZ6|Q3HRZ6_SOLTU Ribosomal protein S8 OS=Solanum tuberosum...    46   0.001
tr|B3TM36|B3TM36_ELAGV 40S ribosomal protein S8 OS=Elaeis guinee...    46   0.001
tr|A9P8H4|A9P8H4_POPTR Ribosomal protein S8 OS=Populus trichocar...    46   0.001
tr|A9P8D2|A9P8D2_POPTR Ribosomal protein S8 OS=Populus trichocar...    46   0.001
tr|A7Y7J6|A7Y7J6_PRUDU Putative 40S ribosomal protein S8 (Fragme...    46   0.001
tr|A5AUZ0|A5AUZ0_VITVI Ribosomal protein S8 OS=Vitis vinifera GN...    46   0.001
tr|B8LML6|B8LML6_PICSI Putative uncharacterized protein OS=Picea...    45   0.002
tr|A9NNT7|A9NNT7_PICSI Ribosomal protein S8 OS=Picea sitchensis ...    45   0.002
tr|A9NMS2|A9NMS2_PICSI Ribosomal protein S8 OS=Picea sitchensis ...    45   0.002
tr|A9NMR0|A9NMR0_PICSI Ribosomal protein S8 OS=Picea sitchensis ...    45   0.002
tr|Q7XKS7|Q7XKS7_ORYSA Ribosomal protein S8 OS=Oryza sativa GN=O...    44   0.003
tr|Q0JDZ7|Q0JDZ7_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs...    44   0.003
tr|Q0E158|Q0E158_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs...    44   0.003
tr|O23985|O23985_HORVU Ribosomal protein S8 (Fragment) OS=Hordeu...    44   0.003
tr|B8AHZ6|B8AHZ6_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.003
tr|B4FGG1|B4FGG1_MAIZE Putative uncharacterized protein OS=Zea m...    44   0.003
tr|B4FE90|B4FE90_MAIZE 40S ribosomal protein S8 OS=Zea mays PE=2...    44   0.003
tr|A3A6Z9|A3A6Z9_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs...    44   0.003
tr|A2XS59|A2XS59_ORYSI Ribosomal protein S8 OS=Oryza sativa subs...    44   0.003
tr|A1YKE4|A1YKE4_BRASY Ribosomal protein S8 OS=Brachypodium sylv...    44   0.003
tr|Q0WSK1|Q0WSK1_ARATH Ribosomal protein S8 OS=Arabidopsis thali...    44   0.004
tr|A8HVQ1|A8HVQ1_CHLRE Ribosomal protein S8 OS=Chlamydomonas rei...    44   0.004
tr|A4SBA6|A4SBA6_OSTLU Ribosomal protein S8 OS=Ostreococcus luci...    44   0.004

>tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_110504 PE=3 SV=1
          Length = 216

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDSTHKRRATGGKKK+WR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWR 22


>tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_194964 PE=3 SV=1
          Length = 216

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDSTHKRRATGGKKK+WR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWR 22


>tr|A9TG34|A9TG34_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_194737 PE=3 SV=1
          Length = 216

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDSTHKRRATGGKKK+WR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWR 22


>tr|A9T469|A9T469_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_191463 PE=3 SV=1
          Length = 216

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDSTHKRRATGGKKK+WR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWR 22


>tr|A9S3Y5|A9S3Y5_PHYPA Ribosomal protein S8 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_208398 PE=3 SV=1
          Length = 216

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDSTHKRRATGGKKK+WR
Sbjct: 1   MGISRDSTHKRRATGGKKKSWR 22


>tr|Q2XPV9|Q2XPV9_SOLTU Ribosomal protein S8 OS=Solanum tuberosum
           PE=2 SV=1
          Length = 221

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDS HKRRATGGKKK+WR
Sbjct: 1   MGISRDSMHKRRATGGKKKSWR 22


>tr|B7FMW0|B7FMW0_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 217

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDS HKRRATGGKKK+WR
Sbjct: 1   MGISRDSMHKRRATGGKKKSWR 22


>tr|Q3HRZ6|Q3HRZ6_SOLTU Ribosomal protein S8 OS=Solanum tuberosum
           PE=2 SV=1
          Length = 224

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDS HKRRATGGKKK WR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWR 22


>tr|B3TM36|B3TM36_ELAGV 40S ribosomal protein S8 OS=Elaeis
           guineensis var. tenera PE=2 SV=1
          Length = 224

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDS HKRRATGGKKK WR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWR 22


>tr|A9P8H4|A9P8H4_POPTR Ribosomal protein S8 OS=Populus trichocarpa
           PE=2 SV=1
          Length = 220

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +2

Query: 56  MGVSRDSTHKRRATGGKKKTWR 121
           MG+SRDS HKRRATGGKKK WR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWR 22