DK943558 |
Clone id |
YMU02A01NGRL0003_D11 |
Library |
YMU02 |
Length |
141 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_D11. 5' end sequence. |
Accession |
DK943558 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL1732Contig1 |
Sequence |
ACACCAAGGGGATAAGCACCAAGTCCCTATCTACAGGTGGAAAATCTATTGATTGGACCC CCGAAGCTGAGTCGGAACTAAAGAGAATCCCTGGTTTTGTGAGGGGAAAAGTAAAAAAAA AAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q85FN8 |
Definition |
sp|Q85FN8|CHLB_ADICA Light-independent protochlorophyllide reductase subunit B OS=Adiantum capillus-veneris |
Align length |
34 |
Score (bit) |
71.6 |
E-value |
1.0e-12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B0YPM9 |
Definition |
tr|B0YPM9|B0YPM9_ANEMR Protochlorophyllide reductase ChlB subunit OS=Aneura mirabilis |
Align length |
34 |
Score (bit) |
38.5 |
E-value |
0.17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943558|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0003_D11, 5' (106 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B0YPM9|B0YPM9_ANEMR Protochlorophyllide reductase ChlB subuni... 39 0.17 tr|B4VIW4|B4VIW4_9CYAN Light-independent protochlorophyllide red... 38 0.29 tr|Q698K4|Q698K4_LARDC Light independent protochlorophyllide oxi... 37 0.50 tr|Q2L601|Q2L601_9CONI Light-independent protochlorophyllide oxi... 37 0.50 tr|B7KC04|B7KC04_9CHRO Light-independent protochlorophyllide red... 36 0.86 tr|B4B0Y3|B4B0Y3_9CHRO Light-independent protochlorophyllide red... 36 0.86 tr|Q8KYZ3|Q8KYZ3_9PROT Light-independent protochlorophyllide red... 36 1.1 tr|B7ZIM6|B7ZIM6_KETDA Photochlorophyllide reductase subunit B O... 36 1.1 tr|B1X0L5|B1X0L5_CYAA5 Light-independent protochlorophyllide red... 35 1.9 tr|Q4BWJ2|Q4BWJ2_CROWT Light-independent protochlorophyllide red... 35 1.9 tr|B7JV38|B7JV38_SYNP8 Light-independent protochlorophyllide red... 35 1.9 tr|B4C3V4|B4C3V4_9CHRO Light-independent protochlorophyllide red... 35 1.9 tr|A3IPD0|A3IPD0_9CHRO Light-independent protochlorophyllide red... 35 1.9 tr|Q2JTT3|Q2JTT3_SYNJA Light-independent protochlorophyllide red... 35 2.5 tr|B4VK40|B4VK40_9CYAN Proto-chlorophyllide reductase 57 kD subu... 35 2.5 tr|B1XP49|B1XP49_SYNP2 Light-independent protochlorophyllide red... 34 4.3 tr|B5W6E6|B5W6E6_SPIMA Light-independent protochlorophyllide red... 34 4.3 tr|B7T1R5|B7T1R5_VAULI ChlB subunit of protochlorophyllide reduc... 34 4.3 tr|B2J0C5|B2J0C5_NOSP7 Light-independent protochlorophyllide red... 33 5.6 tr|A8YD01|A8YD01_MICAE ChlB protein OS=Microcystis aeruginosa PC... 33 5.6 tr|B2X278|B2X278_CHLMO Protochlorophyllide reductase ChlB subuni... 33 5.6 tr|A3YZ48|A3YZ48_9SYNE Light-independent protochlorophyllide red... 33 9.5 tr|A0ZCE6|A0ZCE6_NODSP Light-independent protochlorophyllide red... 33 9.5 tr|Q2L604|Q2L604_CUNLA Light-independent protochlorophyllide oxi... 33 9.5
>tr|B0YPM9|B0YPM9_ANEMR Protochlorophyllide reductase ChlB subunit OS=Aneura mirabilis GN=chlB PE=4 SV=1 Length = 513
Score = 38.5 bits (88), Expect = 0.17 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = +3
Query: 3 TKGISTKSLSTGGKSIDWTPEAESELKRIPGFVR 104 TK + TKSLST + W E++SEL +IPGFVR Sbjct: 448 TKEVITKSLSTD-MDLTWNSESQSELSKIPGFVR 480
>tr|B4VIW4|B4VIW4_9CYAN Light-independent protochlorophyllide reductase, B subunit OS=Microcoleus chthonoplastes PCC 7420 GN=MC7420_7804 PE=4 SV=1 Length = 508
Score = 37.7 bits (86), Expect = 0.29 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3
Query: 3 TKGISTKSLSTGGKSIDWTPEAESELKRIPGFVR 104 TK + TK +S G ++W EA++EL ++PGFVR Sbjct: 443 TKEVITKGISAGS-DLNWNKEAQAELNKVPGFVR 475
>tr|Q698K4|Q698K4_LARDC Light independent protochlorophyllide oxidoreductase ChlB subunit (Fragment) OS=Larix decidua GN=chlB PE=4 SV=1 Length = 482
Score = 37.0 bits (84), Expect = 0.50 Identities = 20/34 (58%), Positives = 23/34 (67%) Frame = +3
Query: 3 TKGISTKSLSTGGKSIDWTPEAESELKRIPGFVR 104 TK I TKSLST S+ W PE+ EL +IP FVR Sbjct: 449 TKEIMTKSLSTD-MSLIWNPESRLELNKIPRFVR 481
>tr|Q2L601|Q2L601_9CONI Light-independent protochlorophyllide oxidoreductase subunitB (Fragment) OS=Larix kaempferi GN=chlB PE=4 SV=1 Length = 499
Score = 37.0 bits (84), Expect = 0.50 Identities = 20/34 (58%), Positives = 23/34 (67%) Frame = +3
Query: 3 TKGISTKSLSTGGKSIDWTPEAESELKRIPGFVR 104 TK I TKSLST S+ W PE+ EL +IP FVR Sbjct: 449 TKEIMTKSLSTD-MSLIWNPESRLELNKIPRFVR 481
>tr|B7KC04|B7KC04_9CHRO Light-independent protochlorophyllide reductase, B subunit OS=Cyanothece sp. PCC 7424 GN=PCC7424_0359 PE=4 SV=1 Length = 508
Score = 36.2 bits (82), Expect = 0.86 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3
Query: 3 TKGISTKSLSTGGKSIDWTPEAESELKRIPGFVR 104 TK + TKS+S ++W EA++EL ++PGFVR Sbjct: 443 TKEVITKSVSADS-DLNWNKEAQTELNKVPGFVR 475
>tr|B4B0Y3|B4B0Y3_9CHRO Light-independent protochlorophyllide reductase, B subunit OS=Cyanothece sp. PCC 7822 GN=Cyan7822DRAFT_2596 PE=4 SV=1 Length = 508
Score = 36.2 bits (82), Expect = 0.86 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3
Query: 3 TKGISTKSLSTGGKSIDWTPEAESELKRIPGFVR 104 TK + TKS+S ++W EA++EL ++PGFVR Sbjct: 443 TKEVITKSVSADS-DLNWNKEAQAELNKVPGFVR 475
>tr|Q8KYZ3|Q8KYZ3_9PROT Light-independent protochlorophyllide reductase, B subunit OS=uncultured proteobacterium GN=bchB PE=4 SV=1 Length = 514
Score = 35.8 bits (81), Expect = 1.1 Identities = 17/27 (62%), Positives = 19/27 (70%) Frame = +3
Query: 24 SLSTGGKSIDWTPEAESELKRIPGFVR 104 +LSTGG W EAE ELK+IP FVR Sbjct: 455 ALSTGGDVAIWLAEAEKELKKIPFFVR 481
>tr|B7ZIM6|B7ZIM6_KETDA Photochlorophyllide reductase subunit B OS=Keteleeria davidiana GN=chlB PE=4 SV=1 Length = 514
Score = 35.8 bits (81), Expect = 1.1 Identities = 20/33 (60%), Positives = 22/33 (66%) Frame = +3
Query: 6 KGISTKSLSTGGKSIDWTPEAESELKRIPGFVR 104 K I TKSLST S+ W PE+ EL RIP FVR Sbjct: 450 KEIMTKSLSTD-MSLIWDPESRLELNRIPRFVR 481
>tr|B1X0L5|B1X0L5_CYAA5 Light-independent protochlorophyllide reductase, B subunit OS=Cyanothece (strain ATCC 51142) GN=chlB PE=4 SV=1 Length = 508
Score = 35.0 bits (79), Expect = 1.9 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +3
Query: 3 TKGISTKSLSTGGKSIDWTPEAESELKRIPGFVR 104 TK + TK +S ++W EA++EL ++PGFVR Sbjct: 443 TKEVITKGISADS-DLNWNKEAQAELNKVPGFVR 475
>tr|Q4BWJ2|Q4BWJ2_CROWT Light-independent protochlorophyllide reductase, B subunit OS=Crocosphaera watsonii GN=CwatDRAFT_0967 PE=4 SV=1 Length = 508
Score = 35.0 bits (79), Expect = 1.9 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +3
Query: 3 TKGISTKSLSTGGKSIDWTPEAESELKRIPGFVR 104 TK + TK +S ++W EA++EL ++PGFVR Sbjct: 443 TKEVITKGISADS-DLNWNKEAQTELNKVPGFVR 475
|