DK943560 |
Clone id |
YMU02A01NGRL0003_D13 |
Library |
YMU02 |
Length |
397 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_D13. 5' end sequence. |
Accession |
DK943560 |
Tissue type |
young leaves |
Developmental stage |
sporophyte |
Contig ID |
CL87Contig1 |
Sequence |
GCGGACCTCAGATCAGGCAAGGCTACCCGCTGAGTTTAAGCATATCACTAAGCGGAGGAA AAGAAACTAACAAGGATTTCCCTAGTAGCGGCGAGCGAACCGGAAAGAGCCCAGCTTGAG AATCGCGCGGCCCCGCCGTGCGAATTGTAGTCTGGAGAGGCGTCCTCTGCGACGGACCGG GCCCAAGTCCCCTGGAAAGGGGCGTCAGAGAGGGTGAGAGCCCCGTCGAGCTCGGACCCT GTCGCTCCACGAGGCGCCGTCGACGAGTCGGGCTGTTTGGGAATGCAGCCCTAAGTGGGT GGTAGATTCCATCCAAGGCTAAATACGGGCAAGAGACCGATAGCGAACAAGTACCGCGAG GGAAAGATGAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6CQE5 |
Definition |
sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis |
Align length |
37 |
Score (bit) |
60.5 |
E-value |
3.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943560|Adiantum capillus-veneris mRNA, clone: YMU02A01NGRL0003_D13, 5' (369 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis GN=TAR... 60 3e-09 sp|Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae GN... 60 4e-09 sp|Q80UW5|MRCKG_MOUSE Serine/threonine-protein kinase MRCK gamma... 35 0.089 sp|Q6DT37|MRCKG_HUMAN Serine/threonine-protein kinase MRCK gamma... 35 0.089 sp|Q8BII1|PROX2_MOUSE Prospero homeobox protein 2 OS=Mus musculu... 31 1.7 sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattu... 31 1.7 sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus... 31 1.7 sp|B0TS25|UBID_SHEHH 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 27 2.1 sp|Q0HQV0|UBID_SHESR 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 2.7 sp|Q0HMY1|UBID_SHESM 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 2.7 sp|A0KSH7|UBID_SHESA 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 2.7 sp|A9L4M9|UBID_SHEB9 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 2.7 sp|A6WT44|UBID_SHEB8 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 2.7 sp|A3CZT2|UBID_SHEB5 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 2.7 sp|A1RFJ5|UBID_SHESW 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 3.4 sp|A4YAT1|UBID_SHEPC 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 3.4 sp|Q99PJ7|ZN689_RAT Zinc finger protein 689 OS=Rattus norvegicus... 30 3.7 sp|O83940|Y975_TREPA UPF0011 protein TP_0975 OS=Treponema pallid... 30 3.7 sp|Q31FH4|Y1507_THICR Maf-like protein Tcr_1507 OS=Thiomicrospir... 30 4.9 sp|P20160|CAP7_HUMAN Azurocidin OS=Homo sapiens GN=AZU1 PE=1 SV=3 30 4.9 sp|Q8EJG1|UBID_SHEON 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 24 5.6 sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein ... 29 6.4 sp|Q8K1S7|KREM2_MOUSE Kremen protein 2 OS=Mus musculus GN=Kremen... 29 6.4 sp|Q8TEQ6|GEMI5_HUMAN Gem-associated protein 5 OS=Homo sapiens G... 29 6.4 sp|A1S2N0|UBID_SHEAM 3-octaprenyl-4-hydroxybenzoate carboxy-lyas... 25 7.2 sp|P38968|SEC31_YEAST Protein transport protein SEC31 OS=Sacchar... 29 8.3 sp|Q13219|PAPP1_HUMAN Pappalysin-1 OS=Homo sapiens GN=PAPPA PE=1... 29 8.3 sp|Q8UJ51|IF2_AGRT5 Translation initiation factor IF-2 OS=Agroba... 29 8.3 sp|A2VDR9|ZN750_BOVIN Protein ZNF750 OS=Bos taurus GN=ZNF750 PE=... 29 8.3
>sp|Q6CQE5|TAR1_KLULA Protein TAR1 OS=Kluyveromyces lactis GN=TAR1-A PE=4 SV=2 Length = 109
Score = 60.5 bits (145), Expect = 3e-09 Identities = 29/37 (78%), Positives = 31/37 (83%) Frame = -3
Query: 367 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRR 257 SF TCSLSVS YLALDGIYHPLRAAFPN+ TRR+ Sbjct: 25 SFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTRRK 61
>sp|Q8TGM6|TAR1_YEAST Protein TAR1 OS=Saccharomyces cerevisiae GN=TAR1 PE=2 SV=1 Length = 124
Score = 59.7 bits (143), Expect = 4e-09 Identities = 29/43 (67%), Positives = 32/43 (74%) Frame = -3
Query: 367 SFPRGTCSLSVSCPYLALDGIYHPLRAAFPNSPTRRRRLVERQ 239 SF TCSLSVS YLALDGIYHPLRAAFPN+ T RR + + Sbjct: 40 SFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTLRRHFTKNR 82
>sp|Q80UW5|MRCKG_MOUSE Serine/threonine-protein kinase MRCK gamma OS=Mus musculus GN=Cdc42bpg PE=2 SV=2 Length = 1551
Score = 35.4 bits (80), Expect = 0.089 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Frame = +3
Query: 120 ESRGPAVRIVVWRGVLCD--GPGPSPLERGVREGESPVELGPCRSTRRRRRVGLFGNAAL 293 ++R P + + V R VLC GPGP P +R +RE ++P + R VG G AL Sbjct: 1188 QARTPVLCVAVKRQVLCYQLGPGPGPWQRRIRELQAPAPVQSLGLLGDRLCVGAAGTFAL 1247
>sp|Q6DT37|MRCKG_HUMAN Serine/threonine-protein kinase MRCK gamma OS=Homo sapiens GN=CDC42BPG PE=1 SV=1 Length = 1551
Score = 35.4 bits (80), Expect = 0.089 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Frame = +3
Query: 120 ESRGPAVRIVVWRGVLCD--GPGPSPLERGVREGESPVELGPCRSTRRRRRVGLFGNAAL 293 ++R P + + V R VLC GPGP P +R +RE ++P + R VG G AL Sbjct: 1189 QARTPVLCVAVKRQVLCYQLGPGPGPWQRRIRELQAPATVQSLGLLGDRLCVGAAGGFAL 1248
>sp|Q8BII1|PROX2_MOUSE Prospero homeobox protein 2 OS=Mus musculus GN=Prox2 PE=2 SV=1 Length = 593
Score = 31.2 bits (69), Expect = 1.7 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +2
Query: 173 RTGPKSPGKGRQRG*EPRRARTLSLHEAPSTSRAVWECSPK 295 R + P KGR+R +R ++L +H+ P S WE PK Sbjct: 89 RESLRCPEKGRER----KRKQSLPMHQGPLKSSPAWERGPK 125
>sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattus norvegicus GN=March11 PE=1 SV=1 Length = 398
Score = 31.2 bits (69), Expect = 1.7 Identities = 15/23 (65%), Positives = 16/23 (69%) Frame = +3
Query: 177 PGPSPLERGVREGESPVELGPCR 245 P P+PLER V GE PVEL P R Sbjct: 45 PLPAPLERIVGSGEPPVELAPRR 67
>sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus musculus GN=March11 PE=2 SV=2 Length = 400
Score = 31.2 bits (69), Expect = 1.7 Identities = 15/23 (65%), Positives = 16/23 (69%) Frame = +3
Query: 177 PGPSPLERGVREGESPVELGPCR 245 P P+PLER V GE PVEL P R Sbjct: 45 PLPAPLERIVGSGEPPVELAPRR 67
>sp|B0TS25|UBID_SHEHH 3-octaprenyl-4-hydroxybenzoate carboxy-lyase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ubiD PE=3 SV=1 Length = 493
Score = 26.9 bits (58), Expect(2) = 2.1 Identities = 20/65 (30%), Positives = 28/65 (43%) Frame = -2
Query: 362 PSRYLFAIGLLPVFSLGWNLPPT*GCIPKQPDSSTAPRGATGSELDGALTLSDAPFQGTW 183 PS + AI +P+F N+PP + P + TG E+D L+ P Q W Sbjct: 98 PSGFKDAIAKIPMFKQALNMPPK---TVRNPPCQQVVK--TGEEVD----LTKLPIQHCW 148
Query: 182 ARSVA 168 VA Sbjct: 149 PGDVA 153
Score = 22.7 bits (47), Expect(2) = 2.1 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -3
Query: 139 TAGPRDSQAGLFPVRSPLLGKSLLV 65 T GPR + L R LLGK L+ Sbjct: 163 TKGPRQKRQNLGIYRQQLLGKDKLI 187
>sp|Q0HQV0|UBID_SHESR 3-octaprenyl-4-hydroxybenzoate carboxy-lyase OS=Shewanella sp. (strain MR-7) GN=ubiD PE=3 SV=1 Length = 493
Score = 25.0 bits (53), Expect(2) = 2.7 Identities = 19/65 (29%), Positives = 27/65 (41%) Frame = -2
Query: 362 PSRYLFAIGLLPVFSLGWNLPPT*GCIPKQPDSSTAPRGATGSELDGALTLSDAPFQGTW 183 P + AI +P+F N+PP + P + TG E+D L+ P Q W Sbjct: 98 PRGFKDAISKIPMFKQALNMPPK---TVRNPACQQVVK--TGDEVD----LTQLPIQHCW 148
Query: 182 ARSVA 168 VA Sbjct: 149 PGDVA 153
Score = 24.3 bits (51), Expect(2) = 2.7 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -3
Query: 139 TAGPRDSQAGLFPVRSPLLGKSLLV 65 T GPR S+ L R LLGK+ L+ Sbjct: 163 TKGPRKSRQNLGIYRQQLLGKNKLI 187
>sp|Q0HMY1|UBID_SHESM 3-octaprenyl-4-hydroxybenzoate carboxy-lyase OS=Shewanella sp. (strain MR-4) GN=ubiD PE=3 SV=1 Length = 493
Score = 25.0 bits (53), Expect(2) = 2.7 Identities = 19/65 (29%), Positives = 27/65 (41%) Frame = -2
Query: 362 PSRYLFAIGLLPVFSLGWNLPPT*GCIPKQPDSSTAPRGATGSELDGALTLSDAPFQGTW 183 P + AI +P+F N+PP + P + TG E+D L+ P Q W Sbjct: 98 PRGFKDAISKIPMFKQALNMPPK---TVRNPACQQVVK--TGDEVD----LTQLPIQHCW 148
Query: 182 ARSVA 168 VA Sbjct: 149 PGDVA 153
Score = 24.3 bits (51), Expect(2) = 2.7 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -3
Query: 139 TAGPRDSQAGLFPVRSPLLGKSLLV 65 T GPR S+ L R LLGK+ L+ Sbjct: 163 TKGPRKSRQNLGIYRQQLLGKNKLI 187
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5BKB8 |
Definition |
tr|A5BKB8|A5BKB8_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
99 |
Score (bit) |
119.0 |
E-value |
6.0e-26 |
Report |
|