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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943571
Clone id YMU02A01NGRL0003_E01
Library
Length 554
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_E01. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
GGCCCTTTCTCTGGCTCTCCCCCATCCTACCTCACTGGTGAGTTCCCCGGTGACTATGGG
TGGGACACAGCTGGTCTGTCCGCAGACCCAGAGACCTTCGCCAAGAACAGGGAGCTGGAG
GTGATCCATTCCAGATGGGCCATGTTGGGAGCCTTGGGCTGTGTGACGCCCGAGCTGCTG
GCAAAGAACGGTGTCAAGTTTGGTGAGGCTGTGTGGTTCAAGGCTGGCTCCCAGATCTTC
GCCGATGGCGGCCTTGATTATCTTGGCAACCCGAGCCTTGTCCACGCTCAAAGCATTTTG
GCCATTTGGGCCTGCCAGGTCATCCTTATGGGCGCTGTTGAGGGGTACCGTGTTGCAGGT
GGTCCCCTTGGTGAGGTTGAGGACCCCATCTACCCCGGTGGCTCCTTCGACCCCCTCGGC
TTGGCTGACGACCCAGAGGCTTTCGCCGAGTTGAAGGTGAAGGAGTTGAAGAACGGTAGG
CTGGCTATGTTCTCCATGTTCGGTTTCTTTGTTCAGGCCATTGTCACCGGAAAGGGCCCC
ATCGAGAACTTGTC
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 184
Score (bit) 378.0
E-value 1.0e-104
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943571|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_E01, 5'
         (554 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   378   e-104
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   368   e-101
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   366   e-101
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   364   e-100
sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII ty...   363   e-100
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   363   e-100
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   362   e-100
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   362   e-100
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   362   e-100
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   362   e-100
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   361   1e-99
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   361   1e-99
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   361   1e-99
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   361   1e-99
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   360   2e-99
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   360   2e-99
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   360   2e-99
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   360   3e-99
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   359   4e-99
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   359   4e-99
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   359   6e-99
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   359   6e-99
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   359   6e-99
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   357   2e-98
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   357   2e-98
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...   357   3e-98
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   355   6e-98
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   355   6e-98
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   355   8e-98
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   354   2e-97

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  378 bits (970), Expect = e-104
 Identities = 182/184 (98%), Positives = 184/184 (100%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL
Sbjct: 59  GPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 118

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           AKNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 119 AKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 178

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 179 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 238

Query: 541 IENL 552
           IENL
Sbjct: 239 IENL 242


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 255

 Score =  368 bits (944), Expect = e-101
 Identities = 174/184 (94%), Positives = 181/184 (98%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 49  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 108

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           ++NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 109 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 168

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 169 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 228

Query: 541 IENL 552
           +ENL
Sbjct: 229 LENL 232


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  366 bits (940), Expect = e-101
 Identities = 172/184 (93%), Positives = 181/184 (98%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 56  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 115

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           ++NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 116 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 175

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 176 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 235

Query: 541 IENL 552
           +ENL
Sbjct: 236 LENL 239


>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3,
           chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1
          Length = 263

 Score =  364 bits (934), Expect = e-100
 Identities = 173/184 (94%), Positives = 180/184 (97%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 57  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 116

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           ++NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 117 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG 176

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 177 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 236

Query: 541 IENL 552
           +ENL
Sbjct: 237 LENL 240


>sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII type
           1 (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 206

 Score =  363 bits (932), Expect = e-100
 Identities = 172/183 (93%), Positives = 179/183 (97%)
 Frame = +1

Query: 4   PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 183
           PFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS WAMLGALGCV PELL+
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60

Query: 184 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 363
           +NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGG
Sbjct: 61  RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 120

Query: 364 PLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 543
           PLGEV DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+
Sbjct: 121 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 180

Query: 544 ENL 552
           ENL
Sbjct: 181 ENL 183


>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member
           1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1
          Length = 274

 Score =  363 bits (931), Expect = e-100
 Identities = 172/184 (93%), Positives = 179/184 (97%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 68  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELL 127

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           A+NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 128 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 187

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DPIYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 188 GPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 247

Query: 541 IENL 552
           IENL
Sbjct: 248 IENL 251


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  362 bits (930), Expect = e-100
 Identities = 172/184 (93%), Positives = 179/184 (97%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 541 IENL 552
           +ENL
Sbjct: 241 LENL 244


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  362 bits (929), Expect = e-100
 Identities = 171/184 (92%), Positives = 179/184 (97%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 541 IENL 552
           +ENL
Sbjct: 241 LENL 244


>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member
           1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1
          Length = 278

 Score =  362 bits (929), Expect = e-100
 Identities = 170/184 (92%), Positives = 180/184 (97%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 72  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 131

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           A+NGVKFGEAVWFKAG+QIF++GGLDYLG+P L+HAQSILAIWACQVILMGA+EGYRVAG
Sbjct: 132 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG 191

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DPIYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 192 GPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 251

Query: 541 IENL 552
           IENL
Sbjct: 252 IENL 255


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  362 bits (928), Expect = e-100
 Identities = 169/184 (91%), Positives = 180/184 (97%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 59  GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGA+EGYRVAG
Sbjct: 119 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAG 178

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DP+YPGG+FDPLGLADDPEAFA++KVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 179 GPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGP 238

Query: 541 IENL 552
           +ENL
Sbjct: 239 LENL 242
tr_hit_id Q4VV55
Definition tr|Q4VV55|Q4VV55_9CONI Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) OS=Pinus flexilis
Align length 184
Score (bit) 369.0
E-value 1.0e-101
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943571|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_E01, 5'
         (554 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4VV55|Q4VV55_9CONI Chloroplast light harvesting chlorophyll ...   369   e-101
tr|Q4VV54|Q4VV54_PINLA Chloroplast light harvesting chlorophyll ...   369   e-101
tr|Q4VV53|Q4VV53_PINMO Chloroplast light harvesting chlorophyll ...   369   e-101
tr|Q4VV52|Q4VV52_PINST Chloroplast light harvesting chlorophyll ...   369   e-101
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   368   e-100
tr|A9NK15|A9NK15_PICSI Putative uncharacterized protein OS=Picea...   367   e-100
tr|Q93XK4|Q93XK4_PINCO Chlorophyll a/b binding protein OS=Pinus ...   367   e-100
tr|Q40788|Q40788_PINCO Chlorophyll a/b binding protein OS=Pinus ...   367   e-100
tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding...   367   e-100
tr|Q40770|Q40770_PICAB Light harvesting chlorophyll a /b-binding...   367   e-100
tr|Q4VV56|Q4VV56_9CONI Chloroplast light harvesting chlorophyll ...   367   e-100
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   366   e-100
tr|Q4VV47|Q4VV47_PICSI Chloroplast light harvesting chlorophyll ...   365   e-100
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   365   e-100
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ...   365   e-100
tr|Q4VV62|Q4VV62_PINEC Chloroplast light harvesting chlorophyll ...   365   e-100
tr|Q4VV60|Q4VV60_PINRA Chloroplast light harvesting chlorophyll ...   365   e-100
tr|Q4VV58|Q4VV58_9CONI Chloroplast light harvesting chlorophyll ...   365   e-100
tr|Q41234|Q41234_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   365   e-100
tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   365   e-100
tr|Q4VV51|Q4VV51_9CONI Chloroplast light harvesting chlorophyll ...   365   1e-99
tr|Q4VV50|Q4VV50_9CONI Chloroplast light harvesting chlorophyll ...   365   1e-99
tr|Q4VV49|Q4VV49_PINLO Chloroplast light harvesting chlorophyll ...   365   1e-99
tr|Q4VV48|Q4VV48_9CONI Chloroplast light harvesting chlorophyll ...   365   1e-99
tr|Q461R5|Q461R5_PINGE Chloroplast putative light harvesting chl...   365   1e-99
tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   365   1e-99
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   365   1e-99
tr|Q1KLZ3|Q1KLZ3_9ROSI Putative chloroplast chlorophyll a/b-bind...   364   1e-99
tr|Q1EP45|Q1EP45_MUSBA Chlorophyll A-B binding protein (CAB), pu...   364   1e-99
tr|Q5ZF93|Q5ZF93_PLAMJ Light harvesting protein 1 (Fragment) OS=...   364   2e-99

>tr|Q4VV55|Q4VV55_9CONI Chloroplast light harvesting chlorophyll a/b
           binding protein (Fragment) OS=Pinus flexilis GN=ifg1934
           PE=4 SV=1
          Length = 256

 Score =  369 bits (946), Expect = e-101
 Identities = 175/184 (95%), Positives = 181/184 (98%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 65  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 124

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           AKNGVKFGEAVWFKAG+QIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 125 AKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAG 184

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 244

Query: 541 IENL 552
           IENL
Sbjct: 245 IENL 248


>tr|Q4VV54|Q4VV54_PINLA Chloroplast light harvesting chlorophyll a/b
           binding protein (Fragment) OS=Pinus lambertiana
           GN=ifg1934 PE=4 SV=1
          Length = 256

 Score =  369 bits (946), Expect = e-101
 Identities = 175/184 (95%), Positives = 181/184 (98%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 65  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 124

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           AKNGVKFGEAVWFKAG+QIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 125 AKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAG 184

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 244

Query: 541 IENL 552
           IENL
Sbjct: 245 IENL 248


>tr|Q4VV53|Q4VV53_PINMO Chloroplast light harvesting chlorophyll a/b
           binding protein (Fragment) OS=Pinus monticola GN=ifg1934
           PE=4 SV=1
          Length = 256

 Score =  369 bits (946), Expect = e-101
 Identities = 175/184 (95%), Positives = 181/184 (98%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 65  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 124

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           AKNGVKFGEAVWFKAG+QIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 125 AKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAG 184

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 244

Query: 541 IENL 552
           IENL
Sbjct: 245 IENL 248


>tr|Q4VV52|Q4VV52_PINST Chloroplast light harvesting chlorophyll a/b
           binding protein (Fragment) OS=Pinus strobus GN=ifg1934
           PE=4 SV=1
          Length = 256

 Score =  369 bits (946), Expect = e-101
 Identities = 175/184 (95%), Positives = 181/184 (98%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 65  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 124

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           AKNGVKFGEAVWFKAG+QIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 125 AKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAG 184

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 185 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 244

Query: 541 IENL 552
           IENL
Sbjct: 245 IENL 248


>tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphorbia
           esula PE=2 SV=1
          Length = 268

 Score =  368 bits (945), Expect = e-100
 Identities = 174/184 (94%), Positives = 181/184 (98%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 62  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 122 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG 181

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEVVDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 541 IENL 552
           +ENL
Sbjct: 242 LENL 245


>tr|A9NK15|A9NK15_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 274

 Score =  367 bits (943), Expect = e-100
 Identities = 174/184 (94%), Positives = 181/184 (98%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 68  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 127

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           A+NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 128 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 187

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGE+ DPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 188 GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 247

Query: 541 IENL 552
           IENL
Sbjct: 248 IENL 251


>tr|Q93XK4|Q93XK4_PINCO Chlorophyll a/b binding protein OS=Pinus
           contorta GN=cab PE=4 SV=1
          Length = 274

 Score =  367 bits (942), Expect = e-100
 Identities = 174/184 (94%), Positives = 181/184 (98%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 68  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 127

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           A+NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 128 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 187

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DPIYPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 188 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 247

Query: 541 IENL 552
           IENL
Sbjct: 248 IENL 251


>tr|Q40788|Q40788_PINCO Chlorophyll a/b binding protein OS=Pinus
           contorta GN=CAB PE=3 SV=1
          Length = 274

 Score =  367 bits (942), Expect = e-100
 Identities = 174/184 (94%), Positives = 181/184 (98%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 68  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 127

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           A+NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 128 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 187

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGEV DPIYPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 188 GPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 247

Query: 541 IENL 552
           IENL
Sbjct: 248 IENL 251


>tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding
           protein Lhcb1*2-2 OS=Picea abies GN=Lhcb1*2-2 PE=2 SV=1
          Length = 275

 Score =  367 bits (942), Expect = e-100
 Identities = 173/184 (94%), Positives = 181/184 (98%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 69  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 128

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           A+NGVKFGEAVWFKAG+QIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 129 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAG 188

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGE+ DPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 189 GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 248

Query: 541 IENL 552
           IENL
Sbjct: 249 IENL 252


>tr|Q40770|Q40770_PICAB Light harvesting chlorophyll a /b-binding
           protein Lhcb1*2-1 OS=Picea abies GN=Lhcb1*2-1 PE=2 SV=1
          Length = 274

 Score =  367 bits (942), Expect = e-100
 Identities = 173/184 (94%), Positives = 181/184 (98%)
 Frame = +1

Query: 1   GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 180
           GPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL
Sbjct: 68  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 127

Query: 181 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 360
           A+NGVKFGEAVWFKAG+QIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 128 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAG 187

Query: 361 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 540
           GPLGE+ DPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 188 GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 247

Query: 541 IENL 552
           IENL
Sbjct: 248 IENL 251