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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK943573
Clone id YMU02A01NGRL0003_E03
Library
Length 442
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_E03. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence 
ACCCGTCAAATTAGCATCCCAAGTCGCAACAGCACATATTGCACTCTTCCCCGCAAGCGT
TTCTCTCTGCAAGGAGTGTCGCAATGGCAGCTGCCACAGTGCTCCCTTCCTCATTTGTGG
GGCAATTAGTTTGAGATAACTAGGTTTCTCCGGATGCAAAATTTTGAGGCATCTGTGAAA
GTGTACAATTTTTAAGGTCGCTGAACCAATGTATGCTATTCATGGGTGTGCTGCTTGACA
AGGAAAGGCGAGTTCTACATAGATGACTCTTGATTTTATCTATGCTCCAAGTGCTCGGGG
CTGTGATTTTTGACGTGATTTGATTGCGGTTTANNAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
ATAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q751F5
Definition sp|Q751F5|SSN3_ASHGO Serine/threonine-protein kinase SSN3 OS=Ashbya gossypii
Align length 36
Score (bit) 33.9
E-value 0.26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943573|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_E03, 5'
         (335 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q751F5|SSN3_ASHGO Serine/threonine-protein kinase SSN3 OS=Ash...    34   0.26 
sp|P39073|SSN3_YEAST Meiotic mRNA stability protein kinase SSN3 ...    33   0.58 
sp|Q6CR51|SSN3_KLULA Serine/threonine-protein kinase SSN3 OS=Klu...    32   0.99 
sp|Q61043|NIN_MOUSE Ninein OS=Mus musculus GN=Nin PE=2 SV=2            30   2.9  
sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus GN...    30   2.9  
sp|Q87HX3|GLGC2_VIBPA Glucose-1-phosphate adenylyltransferase 2 ...    30   3.8  
sp|Q6FKC6|SSN3_CANGA Serine/threonine-protein kinase SSN3 OS=Can...    30   4.9  
sp|Q9KLP4|GLGC2_VIBCH Glucose-1-phosphate adenylyltransferase 2 ...    30   4.9  
sp|Q8C8N3|VWC2_MOUSE Brorin OS=Mus musculus GN=Vwc2 PE=1 SV=1          29   6.4  
sp|Q2TAL6|VWC2_HUMAN Brorin OS=Homo sapiens GN=VWC2 PE=2 SV=1          29   6.4  
sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens GN...    29   6.4  
sp|Q7MEE9|GLGC2_VIBVY Glucose-1-phosphate adenylyltransferase 2 ...    29   6.4  
sp|Q8D7E0|GLGC2_VIBVU Glucose-1-phosphate adenylyltransferase 2 ...    29   6.4  

>sp|Q751F5|SSN3_ASHGO Serine/threonine-protein kinase SSN3 OS=Ashbya
           gossypii GN=SSN3 PE=3 SV=1
          Length = 581

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -3

Query: 195 LKIVHFHRCLKILHPEKPSYLKLIAPQMRKGALWQL 88
           L+I+HFH      HPEK    +LIAP+M K  +WQ+
Sbjct: 256 LQIIHFHS-----HPEK----RLIAPRMLKSIMWQI 282


>sp|P39073|SSN3_YEAST Meiotic mRNA stability protein kinase SSN3
           OS=Saccharomyces cerevisiae GN=SSN3 PE=1 SV=3
          Length = 555

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = -3

Query: 258 VELAFPCQAAHP*IAYIGSATLKIVHFHRCLKILHPEKPSYLKLIAPQMRKGALWQL 88
           VE+    +  H    Y     L+I+HFH      HPEK    ++I P+M +  +WQL
Sbjct: 223 VEIFLERKCVHMVYEYAEHDLLQIIHFHS-----HPEK----RMIPPRMVRSIMWQL 270


>sp|Q6CR51|SSN3_KLULA Serine/threonine-protein kinase SSN3
           OS=Kluyveromyces lactis GN=SSN3 PE=3 SV=1
          Length = 593

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -3

Query: 195 LKIVHFHRCLKILHPEKPSYLKLIAPQMRKGALWQL 88
           L+I+HFH      HPEK    +LI P+M K  +WQ+
Sbjct: 270 LQIIHFHS-----HPEK----RLIPPRMLKSIMWQI 296


>sp|Q61043|NIN_MOUSE Ninein OS=Mus musculus GN=Nin PE=2 SV=2
          Length = 2035

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = -3

Query: 192  KIVHFHRCLKILHPEKPSYLKLIAPQMRKGALWQLPLRHSLQRETLA 52
            +I  FHR +K  HPEKPS    + P+    AL  L  +H  Q  T+A
Sbjct: 1398 EIAWFHRAIKT-HPEKPSAQNRVIPE-GSAALLGLQDKHLQQEATIA 1442


>sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus
           GN=Lama1 PE=1 SV=1
          Length = 3084

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 130 TNCPTNEEGSTVAAAIATLLAERNACGEECNMCC 29
           ++CP +EE   +         E N CGE C+ CC
Sbjct: 284 SSCPWDEEAKQLQCQ-----CEHNTCGESCDRCC 312


>sp|Q87HX3|GLGC2_VIBPA Glucose-1-phosphate adenylyltransferase 2
           OS=Vibrio parahaemolyticus GN=glgC2 PE=3 SV=1
          Length = 404

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 183 HFHRCLKILHPEKPSYLKLIAPQMRKGALW 94
           H      I +PE   Y+  + PQMRKG  W
Sbjct: 67  HLRDGWSIFNPELGEYITAVPPQMRKGGAW 96


>sp|Q6FKC6|SSN3_CANGA Serine/threonine-protein kinase SSN3
           OS=Candida glabrata GN=SSN3 PE=3 SV=1
          Length = 567

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 195 LKIVHFHRCLKILHPEKPSYLKLIAPQMRKGALWQL 88
           L+I+HFH      HPEK    ++I P+M +  +WQ+
Sbjct: 251 LQIIHFHS-----HPEK----RMIPPRMIRSIMWQI 277


>sp|Q9KLP4|GLGC2_VIBCH Glucose-1-phosphate adenylyltransferase 2
           OS=Vibrio cholerae GN=glgC2 PE=3 SV=1
          Length = 407

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 183 HFHRCLKILHPEKPSYLKLIAPQMRKGALW 94
           H      I +PE   ++ ++ PQMRKG  W
Sbjct: 67  HLRNGWSIFNPELGEFITVVPPQMRKGGKW 96


>sp|Q8C8N3|VWC2_MOUSE Brorin OS=Mus musculus GN=Vwc2 PE=1 SV=1
          Length = 324

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = -2

Query: 187 CTLSQMPQNFASGET*LSQTNCPTNEEGSTVAAAIATLLAERNACGEECNMCCC 26
           CT+S  PQ             CP  + G    A  A + A R    +EC +C C
Sbjct: 248 CTVSACPQTECVDPVYEPDQCCPICKNGPNCFAETAVIPAGREVKTDECTICHC 301


>sp|Q2TAL6|VWC2_HUMAN Brorin OS=Homo sapiens GN=VWC2 PE=2 SV=1
          Length = 325

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = -2

Query: 187 CTLSQMPQNFASGET*LSQTNCPTNEEGSTVAAAIATLLAERNACGEECNMCCC 26
           CT+S  PQ             CP  + G    A  A + A R    +EC +C C
Sbjct: 249 CTVSACPQTECVDPVYEPDQCCPICKNGPNCFAETAVIPAGREVKTDECTICHC 302
tr_hit_id B5VTB8
Definition tr|B5VTB8|B5VTB8_YEAS6 YPL042Cp-like protein OS=Saccharomyces cerevisiae (strain AWRI1631)
Align length 57
Score (bit) 32.7
E-value 9.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK943573|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_E03, 5'
         (335 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5VTB8|B5VTB8_YEAS6 YPL042Cp-like protein OS=Saccharomyces ce...    33   9.4  
tr|B3LL23|B3LL23_YEAS1 Meiotic mRNA stability protein kinase UME...    33   9.4  
tr|A6ZWK5|A6ZWK5_YEAS7 Cyclin-dependent protein kinase OS=Saccha...    33   9.4  

>tr|B5VTB8|B5VTB8_YEAS6 YPL042Cp-like protein OS=Saccharomyces
           cerevisiae (strain AWRI1631) GN=AWRI1631_162230 PE=4
           SV=1
          Length = 518

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = -3

Query: 258 VELAFPCQAAHP*IAYIGSATLKIVHFHRCLKILHPEKPSYLKLIAPQMRKGALWQL 88
           VE+    +  H    Y     L+I+HFH      HPEK    ++I P+M +  +WQL
Sbjct: 223 VEIFLERKCVHMVYEYAEHDLLQIIHFHS-----HPEK----RMIPPRMVRSIMWQL 270


>tr|B3LL23|B3LL23_YEAS1 Meiotic mRNA stability protein kinase UME5
           OS=Saccharomyces cerevisiae (strain RM11-1a)
           GN=SCRG_02449 PE=4 SV=1
          Length = 555

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = -3

Query: 258 VELAFPCQAAHP*IAYIGSATLKIVHFHRCLKILHPEKPSYLKLIAPQMRKGALWQL 88
           VE+    +  H    Y     L+I+HFH      HPEK    ++I P+M +  +WQL
Sbjct: 223 VEIFLERKCVHMVYEYAEHDLLQIIHFHS-----HPEK----RMIPPRMVRSIMWQL 270


>tr|A6ZWK5|A6ZWK5_YEAS7 Cyclin-dependent protein kinase
           OS=Saccharomyces cerevisiae (strain YJM789) GN=SSN3 PE=4
           SV=1
          Length = 555

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = -3

Query: 258 VELAFPCQAAHP*IAYIGSATLKIVHFHRCLKILHPEKPSYLKLIAPQMRKGALWQL 88
           VE+    +  H    Y     L+I+HFH      HPEK    ++I P+M +  +WQL
Sbjct: 223 VEIFLERKCVHMVYEYAEHDLLQIIHFHS-----HPEK----RMIPPRMVRSIMWQL 270