DK943577
Clone id YMU02A01NGRL0003_E09
Library
Length 479
Definition Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_E09. 5' end sequence.
Accession
Tissue type young leaves
Developmental stage sporophyte
Contig ID
Sequence
ACAACAAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGA
AGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCG
GGAGCGTGTACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGA
TGTGGAAGCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAG
AGTGCGCCAAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGC
AGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGCCCTCTGTCTAAACTTTCTTAAAGCAAG
CCAATTTAGTTGGCATGAATGCCTGCTTCCCATTTCCCACTGGCGCCTAACAAGCTTGCT
CTTATGAGCTTTTGTGTCCCAGCCACTTTGCATACATAATGAAACAACTTCCCAGTGGT
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 111
Score (bit) 164.0
E-value 1.0e-40
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943577|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_E09, 5'
(479 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 164 1e-40
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 164 3e-40
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 163 4e-40
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 161 1e-39
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 161 2e-39
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 161 2e-39
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 160 4e-39
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 160 4e-39
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 160 4e-39
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 160 4e-39
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 160 4e-39
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 159 6e-39
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 159 8e-39
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 158 1e-38
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha... 158 1e-38
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha... 158 1e-38
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha... 158 1e-38
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha... 157 2e-38
sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small cha... 157 2e-38
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 157 2e-38
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 157 2e-38
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 157 3e-38
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai... 157 3e-38
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha... 156 4e-38
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 156 5e-38
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 155 9e-38
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 155 9e-38
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 155 9e-38
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 155 1e-37
sp|O22645|RBS5_FRIAG Ribulose bisphosphate carboxylase small cha... 155 1e-37

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 164 bits (416), Expect = 1e-40
Identities = 71/111 (63%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVM 182
KK+ETLSYLPPLS E ++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW M
Sbjct: 67 KKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 126

Query: 183 WKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 335
WKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD RQVQ F+V KP
Sbjct: 127 WKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 164 bits (414), Expect = 3e-40
Identities = 73/111 (65%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVM 182
KKFETLSYLPPLSSEQ+AK+VD+++RK PC+EF+ + G VYREH GYYDGRYW M
Sbjct: 69 KKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTM 128

Query: 183 WKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 335
WKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+ F+ KP
Sbjct: 129 WKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 163 bits (412), Expect = 4e-40
Identities = 69/110 (62%), Positives = 87/110 (79%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 185
KKFETLSYLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYRE+ + GYYDGRYW MW
Sbjct: 66 KKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMW 125

Query: 186 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 335
KLPMFGC D++ VL+E+ EC+K YP+ F R++GFD RQVQ FL KP
Sbjct: 126 KLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
Length = 174

Score = 161 bits (408), Expect = 1e-39
Identities = 69/110 (62%), Positives = 85/110 (77%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 185
KKFETLSYLPPLS+E ++KQVD+++R W PC+EF K+G V+REH GYYDGRYW MW
Sbjct: 56 KKFETLSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 115

Query: 186 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 335
KLPMFGC DA VL E+ E KEYP+A++RV+GFD RQVQ F+ +P
Sbjct: 116 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 174

Score = 161 bits (407), Expect = 2e-39
Identities = 68/110 (61%), Positives = 84/110 (76%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 185
KKFETLSYLPPLS+E + KQVD+++R W PC+EF K+G ++REH GYYDGRYW MW
Sbjct: 56 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 115

Query: 186 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 335
KLPMFGC DA VL E+ E KEYP+A++R++GFD RQVQ F+ KP
Sbjct: 116 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165


>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
Length = 175

Score = 161 bits (407), Expect = 2e-39
Identities = 69/110 (62%), Positives = 84/110 (76%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 185
KKFETLSYLPPLS+E + KQVD+++R W PC+EF K+G V+REH GYYDGRYW MW
Sbjct: 57 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 116

Query: 186 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 335
KLPMFGC DA VL E+ E KEYP+A++RV+GFD RQVQ F+ +P
Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRP 166


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 160 bits (404), Expect = 4e-39
Identities = 70/111 (63%), Positives = 84/111 (75%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 185
KKFETLSYLPPLS E +AK+VD+++R W PCIEF K G VYRE+ GYYDGRYW MW
Sbjct: 67 KKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMW 126

Query: 186 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 338
KLPMFGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ F+ KP+
Sbjct: 127 KLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 160 bits (404), Expect = 4e-39
Identities = 70/111 (63%), Positives = 84/111 (75%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 185
KKFETLSYLPPLS E +AK+VD+++R W PCIEF K G VYRE+ GYYDGRYW MW
Sbjct: 67 KKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMW 126

Query: 186 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 338
KLPMFGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ F+ KP+
Sbjct: 127 KLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
Length = 177

Score = 160 bits (404), Expect = 4e-39
Identities = 70/111 (63%), Positives = 84/111 (75%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 185
KKFETLSYLPPLS E +AK+VD+++R W PCIEF K G VYRE+ GYYDGRYW MW
Sbjct: 67 KKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMW 126

Query: 186 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 338
KLPMFGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ F+ KP+
Sbjct: 127 KLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small chain
SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1
Length = 177

Score = 160 bits (404), Expect = 4e-39
Identities = 70/111 (63%), Positives = 84/111 (75%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 185
KKFETLSYLPPLS E +AK+VD+++R W PCIEF K G VYRE+ GYYDGRYW MW
Sbjct: 67 KKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMW 126

Query: 186 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 338
KLPMFGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ F+ KP+
Sbjct: 127 KLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 112
Score (bit) 218.0
E-value 2.0e-55
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK943577|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_E09, 5'
(479 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 218 2e-55
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 167 3e-40
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 166 7e-40
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 164 2e-39
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 164 2e-39
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 163 5e-39
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 162 6e-39
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c... 162 6e-39
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 162 6e-39
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 162 6e-39
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c... 162 8e-39
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c... 162 1e-38
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c... 162 1e-38
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 162 1e-38
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c... 161 1e-38
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 161 1e-38
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c... 161 2e-38
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza... 161 2e-38
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 161 2e-38
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c... 161 2e-38
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 161 2e-38
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c... 160 2e-38
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c... 160 2e-38
tr|Q9ZWH1|Q9ZWH1_AEGSE Ribulose bisphosphate carboxylase small c... 160 2e-38
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c... 160 2e-38
tr|Q9ZWG8|Q9ZWG8_TRITU Ribulose bisphosphate carboxylase small c... 160 2e-38
tr|Q9ZWG7|Q9ZWG7_SECCE Ribulose bisphosphate carboxylase small c... 160 2e-38
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c... 160 2e-38
tr|Q9ZWG4|Q9ZWG4_AVESA Ribulose bisphosphate carboxylase small c... 160 2e-38
tr|Q9ZWG2|Q9ZWG2_BROCA Ribulose bisphosphate carboxylase small c... 160 2e-38

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 218 bits (554), Expect = 2e-55
Identities = 98/112 (87%), Positives = 108/112 (96%)
Frame = +3

Query: 3 NKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVM 182
NKKFETLSYLPPL+++QIAKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+M
Sbjct: 62 NKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIM 121

Query: 183 WKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 338
WKLPMFGC D+ +VLREIAECAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 122 WKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
chain OS=Lactuca sativa PE=2 SV=1
Length = 181

Score = 167 bits (422), Expect = 3e-40
Identities = 71/111 (63%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVM 182
KK+ETLSYLPPLS E ++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW M
Sbjct: 67 KKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTM 126

Query: 183 WKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 335
WKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ F+V KP
Sbjct: 127 WKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
chain OS=Populus trichocarpa PE=2 SV=1
Length = 170

Score = 166 bits (419), Expect = 7e-40
Identities = 71/111 (63%), Positives = 87/111 (78%)
Frame = +3

Query: 3 NKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVM 182
NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV REH GYYDGRYW +
Sbjct: 58 NKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGYYDGRYWTL 117

Query: 183 WKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 335
WKLPMFGC D++ VL EI EC K YP+A+IR L FD K Q Q F++QKP
Sbjct: 118 WKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKP 168


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 164 bits (415), Expect = 2e-39
Identities = 74/113 (65%), Positives = 91/113 (80%), Gaps = 3/113 (2%)
Frame = +3

Query: 9 KFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWV 179
KFET SYLPPL+ +QIAKQVDFM+++ PCIEFD +GSV R +F G SGYYDGRYW
Sbjct: 67 KFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWT 126

Query: 180 MWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 338
MWKLPMFGC D+A VLREI EC + +P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 127 MWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 164 bits (415), Expect = 2e-39
Identities = 74/113 (65%), Positives = 91/113 (80%), Gaps = 3/113 (2%)
Frame = +3

Query: 9 KFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWV 179
KFET SYLPPL+ +QIAKQVDFM+++ PCIEFD +GSV R +F G SGYYDGRYW
Sbjct: 67 KFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWT 126

Query: 180 MWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 338
MWKLPMFGC D+A VLREI EC + +P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 127 MWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Triticum urartu GN=rbcS PE=3 SV=1
Length = 165

Score = 163 bits (412), Expect = 5e-39
Identities = 69/110 (62%), Positives = 85/110 (77%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 185
KKFETLSYLPPLS+E + KQVD+++R W PC+EF K+G V+REH+ GYYDGRYW MW
Sbjct: 52 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHYSSPGYYDGRYWTMW 111

Query: 186 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 335
KLPMFGC DA VL E+ E KEYP+A++RV+GFD RQVQ F+ +P
Sbjct: 112 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 161


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 162 bits (411), Expect = 6e-39
Identities = 72/113 (63%), Positives = 91/113 (80%), Gaps = 3/113 (2%)
Frame = +3

Query: 9 KFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWV 179
KFET SYLPPL+ +QIAKQVD+M+++ PCIEFD +GSV R +F G SGYYDGRYW
Sbjct: 102 KFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWT 161

Query: 180 MWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 338
MWKLPMFGC D++ VLREI EC ++P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 162 MWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small
chain OS=Triticum aestivum GN=rbcS PE=3 SV=1
Length = 174

Score = 162 bits (411), Expect = 6e-39
Identities = 70/110 (63%), Positives = 85/110 (77%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 185
KKFETLSYLPPLS+E + KQVD+++R W PC+EF K+G V+REH SGYYDGRYW MW
Sbjct: 56 KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSSGYYDGRYWTMW 115

Query: 186 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 335
KLPMFGC DA VL E+ E KEYP+A++RV+GFD RQVQ F+ +P
Sbjct: 116 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
chain OS=Panax ginseng PE=2 SV=1
Length = 183

Score = 162 bits (411), Expect = 6e-39
Identities = 70/111 (63%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Frame = +3

Query: 6 KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVM 182
KKFETLSYLP L+ EQ++K+VD+++R GW PC+EF+ + G VYREH H GYYDGRYW M
Sbjct: 68 KKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTM 127

Query: 183 WKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 335
WKLPMFGC D++ VL+E+ EC KEYP A+IR++GFD RQVQ F+ KP
Sbjct: 128 WKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 162 bits (411), Expect = 6e-39
Identities = 72/113 (63%), Positives = 91/113 (80%), Gaps = 3/113 (2%)
Frame = +3

Query: 9 KFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWV 179
KFET SYLPPL+ +QIAKQVD+M+++ PCIEFD +GSV R +F G SGYYDGRYW
Sbjct: 72 KFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWT 131

Query: 180 MWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 338
MWKLPMFGC D++ VLREI EC ++P ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 132 MWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184